Spg038765 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg038765
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	nijmegen breakage syndrome 1 protein
Location	scaffold12: 2553752 .. 2564365 (-)
RNA-Seq Expression	Spg038765
Synteny	Spg038765

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATAACTCCTCTTGTCAAGGTGAGCATAACTAATTCACGTGTACCTCGATCACCCTTAAAAGCTTCGAATTCTTCGTCCAAATTTTGTTGAATAACATAAAAATAAATAAATAAAATAAATCCATAATCCCCTCCAAGCCCCCACTGTATAAAACCCGGTTCACAACTAAAAAAAACTCGACCAGCTCTCTGCTTGATCATTGTGAACGCCTTCCTCGTTCTTTCAGTCTGCTCTCCTCTCCCCTTCCATGGAATTGCACATCAACTGTTAAACAATAGAAAACTATCTTCGAAAATATGGTTTGGGGCTTCTTCCCCGTTGATCCTCTTTCAGGTATTTTCGTTTTTCTTGATTTTCAAATTACTTCTTGCTGCTGTGAAAGTAGCTTTCTTTTTGCTGTTGTCAAATAACTTCCAGTCAACTGTTGGGAGCTCAATATTGATTTTCAATGCTTACTGTCTGAGGAATCGTCGGTTTTCCTTTGGTTGGATAATTTTTATAATCAACTGCATGTTGCAGGCGAGGAGAAATTCTACATTTTTGCACCTGGGAAGTATAAAGTGGGTCGTAAAGGTACTTCGCTTATGCTAGTAGTTACATTCGACTCAGTATTTTTTCTTCTAAATGATGAATTTTATGGTGCATTCTTGGTCTATGCTGTATTTTAGATGGTTTTTTGTTTTATCATGTTAGTAGAAGCGATGATTCTTTTACTAGGCAATTATCGAGTGGATATTGTGCTAGCTATAGACATAGAGGACGATTGATTTTCTGGAAACGCTGAAGGCATTGGATAGTGGGGGGCACTCTTAGTTTGACGTAAATTCAAGCCCTACATAAAATACTCAGACCCGTTTGATAACTATTTGATTTTTGAAAATTAAGCTTATAAACACTAGTTTCCTTGTTTTATTATCTGCTTTCTTCCATGTTTTCAAAAACCAAGTCAAGTTTCAAAAACTAAAAAAATAGTTTTAAAAAATTTGTTTTTATTTTTGAAATTTGACTAAGCATTCGAATGTTTCCTTAACAAAGATGAAAATCAAGGAAATCGGGAAAAAACAAGCATAATTATAAAAAACCAAATAGTTGTCGAATGAAACCTTAAGAGTTTTTAGTTTTTCTCTAATTTGTTCCCTAAATTATTATAATGGAAGGATTATACATATAAAGAAGTTAGAATGTAAAATTTTGTCCCTCCTTACAAAAAATTTCTGGCCCAGGCCCTGGTTACTCCCATGTATGAGGCTTTGAGTTTGACAAAGAATTTGATTTCTTCCATTTAGTTAGACTTAATTATCATGATTCTTTGACTTTACTCTCTCTCTTTCTGTGTGTTTGTGTGTGTGTTTCTATGTCTGTCTTTGTTATTCCATATAATTATTAATTAAGAAACGGATATATGATTAGATTACAATCTTAATCGGTCAGTTATAAGTGTACTCAATGTCCCGATGAGACCTTATCAAGCCTAATTTGTGCCCTACTGGCCCTACTGAGTGAGTGTCCTAATGACCTTATTGAGGGAATGATCCCAAGTAATCCGTGTCCTTTGAATGTGTTTTCAAGAAGGCAAGAGTTCCGAGCTCCATGTAATTTCTCAAAAAGATGCCAAAAGCCTCCTTCCTTACTCACAACTGGGGCATATTCCTAAGAGCTATCAAAATTTGCAATATTCGAAAGGAATAAGGGGAAGAGGCCTATTGAATCGAAAGTCTACATCAATGCAGATGATGAAAGTCTATTGATGATAGAAGATCTACATCCATATATTACTATTTTAGGAGGAAATTTTGTTACTATTTGGAGATGTAAGCAAATGTTGTGCTTGATCAAGTTTAGAAGTTGCATTCAGAGCAACAACACTAGGAATATTTGTACTTCTTAGTATAAAAATAATCTTAGAGGACTTGTAGCTTCCTTTGGCTCAAGATAATCCACTTAGGAAACATTAAAACACAAAAAATCTTAAATAAGGAAAGCATATGAGGCTTTATTGTGATGAAAAATCATTTATAAACATATTTCACAATGTAGTTCAACATGACAGAACCAACCACAGGGAAGCAGATAGATATTTCAAAAAAGACAAATTGTGGGTAGTGGGCTCATCTGTACAACAATTGTTCCTCACAAATAGTCTAGTTGTGGGCATCTTAACTAAATGGTGAATGGGTTCAGTTTTCTACATTTTATCAATAAGCTGGGAATGTAAAACATCCCTTCACCAACTTGAGCGGAGTGTCAAAACCTGAGGGTCTCAACAAGGAAAGTACAAGATTTTTTTTTTTTTTTTTGGTTCTCAGCTGTGGTCTGTGGATCATGTATTATACTTATTTGCTTTAATTGATTGTATACTCTTTGTAATTAGCACACTAGATTTAAGGCCAATCATCAAGAACTAGACCTTCCTTATTTGTCTGGGAAGTTTGTTATTATTCCTCTCTCCTTTCCAGTGAGAATTTGCCATTTTAGCTAAATTTGTTAGAGAGAGAAAGTGTGTGTCAAATGGAGAGAGAAAGAGAGAGGGAGGGTTAGAGAGACTAGCGAGGGAGAGGGAAGATCAGAGACTCTATAGAGGGAGAGGTAGATTAAGATAGAGGGCTTACTTGTTGCTTTGATAAGTTGAGAAAGTTTGAGGCTATCACCAGGTGAAGAACAGAAGGAGAGTGTTTTGACTTTTGAGGGAGGCATTTAATTTTCTATTTATAAGAAACTTGAGTATATTAACTGAAAAAGAGAGAAATCAAATAACCTAAGGGCTGGGGAAGAGGGGACCTATCCACAAAAGAACTAAAGAAAAGCTTTCCAGTTGTTCATGATCATGGAAAGGCTGCACTTACAAAATAATTTCCTATGGTGATGTTGAGGCAACCTCGGGCGCTTGCCTATGGTGAGAGGTGAGGCGACCACAGGGTCTAGCGCCTTGTAGGTTGGCCAAGCGAGCGACTTCAAAGAGGTGCTCGCCCAGCTTGGCATCGCCCGTCGCCTTGACGAAGGCGAGTGCCTCTTTGAATTATCGCGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATAATGGTTTAACTTATACTAACTTTAACGAAAACCTAAGCCCACGAAAAACTAAAAGGCCATGCAGAGAGCTGGTTTTCAGCCGCTTTAGCTTTTTTTAATCGGCTATAGCTTGCTTTCTCATGCAAAATTGAAAAAAACTCTTCGACTGTTCTGAACTTCTCCTTATTCAGACGTTTCTGCTTCTTCTTTGAACTTCAATTGTTGCTGCTTCTTCTCCAATCTTTAGCTTCTCCTTATTTGACTTTTCCTTCTGTCCTTCAATTATTCATATTGTTCATACTCGTTCTTGAGCCATTCTTTTTCAATTTTCTCCTTGCTGGTCATCACTTATTCTTGAGGTGTGAGGTGAGGTTTTCTTTTAGTTTTATTTTGTATTTTTTTTCTAAGTCTTAGATGGGAGAGGATGATGATTTTGACATTTGATGTTCTACTTTTAGAATTTTAGTTTTTGTTCACTCTTAATGTATTCATGGTGTTTTGGAACTACTAGCAATTTATTCTTGTTTGATGTTTTTGCCATTTTGGTGTTTTAACTATTTAGTATTAATCTGTAAGGATTTGACATTTTTTGTAACTATATTTACTATATAAATTTATGCTCTATATATATTATTTATTTTTTCATATATTCATTGTGCCTTGCTTCACTCGGGCGTCGCCTTTTTGTCGCCTCTCGCCTTGAGGCGATCAAGGGGCTTGTCGCCTTGTGGTGCGCCTTGTGCTTTGAAATCACTCATTAAATCACCACCTAGAAGAGGTATATTGTACATTCCTACAAAAATAAAGTATCAAAAGAAAAAGCCCTATTTCAAAAGTCCGGAGATTCTTCTCCAACCAAATATGCCAAGATTTGACATTATGCTTTTAAAGAAAAGCAGAAGTGCTCAGGCAGGTTGCATGACGCCTCAGGGCTTAAGCAGGTGGACACACATAAAGTTGTGCCAATGTGAGGGCAAGGTTTCTCATACACGTGCTTCTTTTAGCTTTTTAAAACAATGACTTGATCAATGTTATAAACATTTTACATAATGCTTCTTTTAGCTTCTTTTTCTTTTGCTCCTGTTTTCTTAGGCTTTCCTTTTTGTATTGCCTTTTTGCTGCCATCTTCATGGGAAAAAATATTTTAAACATTTAATAACTTCCATTTAACATCCACTTTCTTTGGTCTTTCAAATAAGTTGTTTGCTCATTCTGTGATCTTGTTTGTCCCGCAGGCTGTGATTTGACTATAACAAAAGATAAAGGAGTTTCCCGCATCCATGCAGAAATAGTTGTAGATGCTATGATCTTTTTCCACAAGAGTTATTTATCTAATGTTTCCACTAAAGCGAGGATTAGCGATTGCTCCAAGTATGGTACATTTGTTAGCAGGAATTCTGGGTTGAAGGAGAAAATTCACGAGCTTCCAAAAAAAGAAGCAAGCTTGTACGATGGAGATGTGGTTTCATTTGGATCTGGCAATGCAACCTACAGGTAATCTGAGAAACATTTAAAATAGTGATAAGATTTATCCTTCAAGTTGCTCTCACTGCCTATCTCTTTATTTGAAGTAGGATACGCTATATATGGTGTATTAGACTCATTATTAAATCCAGGGCTCTCAGTTAAATGAGGTGCTTGCTATTTATTCAGTGAATCAGTGATTGTTTTCTTCTATGGCTAAATTATTTTCTAATGTTCGTACATCCTCTTTTTTTCTTCTAACTTTCCTTTATTCTCGATTCTTAAAAACTAGAGCAATTTTTTGTTATAATTTGTCTTCTTTTCTTTGACCAAAAGTTCCGTGTTTTTGTATTTAGCTTTTATGAATATGCAAAGTTTCTTCTTATTTGTACTTAAATTTACTCTTTGAAGCTAGAAGATCTCCTTTCCCTTTTTGCTTTGGCTAATATATAGATATATTTTAATGCTAATAGACTTTTCAGTTTCTATTTTTTAAAAAAGAGAAAACCTCTTGAGAGGAGACATTACCATTTTATAGTCGAAGCATTTTTACTTTCAACAAGATTTTCTAACACCCATTCTTGTAGACCTTATTAGCCTATAAACAAATCTTGCAGGTTCTCCTTTGTGCAACTCTTGTTTTACGTTCACCATTCAGAGTCCTTCAAATTCCAACTGCTTAGGGACAAGGTTTCATCCATCGGTAAGCCATAGAGAAGTTGCTGATCTTCTTTTGTTTTATCTACGAAAGGAATTCTTATCTGATTAATTAGAAGTTTCAATTTCCCAAGGTTTCTTATGTAACTGCTTAGTTGCTTTATGTTGGCATGTCCTAGAACAAAAACTTGAAAACTCTAAATACAACCTTAAAGACATGGTGTTGAATATGTTCGAGAATATGAGGCAAAACAGAAGGGAATCCTTCACCTTATCCATACATAGAATTCTGAACTTAATAGCATGTTAAATTACAATAAAGAACGGCAACTAACTAAAGGGAGGTTTGTTTAAATTAGCTATACACTGTAAAAAGGATAAAATAAAATAAAGTAAATTAAATAATTCCTAAATAATGCAAAAGAACAACAAATAACCAGCTACATATATACATCCTTACACTTTATATATATATATATATATATATATATATAAATCAACCATCTTGATGTTTTAAAACATAGAATAATTTGTGATTGATGCATTTTTCCATGATCATCTGGCTCAGAACAAGTAGAAGATCCTAATTTAACCTTTCTAGCTATTATACTATGAATTTTTACTGGTCACTTTTATGAATGAGCTCTGCATATTTGTTCGCAAGCTGTTCTGACAGATGTCTCTATTAGGGTTTTTTTTTTTTTTTACTGTGATGCAAGCCGTCAATCAAGTTCATCATTATTTATTACATGGTTTATGATGATGAACATCTACTCATTGTACAAGTTAAATCTGCATTGAAGAAAGTGAATGAATTTGTAGTTTTGGTTGAATTTAATGAGTGTATAAATTCAAATGTAGGTGCTTCTACTTCTGATGATATTAAGGAGTGTACGCATGTGCTTGTAGAGGAACTGATGCCTTTCAATGAAGCTCTAGTTGATGCCATCGTGGCTGAGAAACCTTTTGTTCTTACCAGTTGGGTTGAGGTAAAAATGTGCTTCATATATTAATTGTTTCTACTGTGATGTCAACTTCTATCGTCATGTTCACACCCATATTATGGTAGGAACCTGGTCTTGAGAATAGGAAAGAACTTTGAAATTGTATTAAGACATGAAAGGAAAATAACAATATCAACCCCAAGCACTTCTATATATCTTACTCTCCCAAGAAAACTGCACTCCAAAATTCTAACTAAATAACTCCCTCTATTTATAACTACCCTACCCTAACAACTACCAAATAAATAAGTAACTCTCAAATATTTTTCTCCTTTCGATTTCTTGTTATGTGTATCCTTGATGAATTTGTAGCCTGTAGGTACATCATTGTTAAAATCTAGCAAGGATAAACAAAATTTACAGCTAGGAAAGTGTACACCTATATGGTAAATACAAATAATGGAACACAGAAAAAACCAGGAATAAATAGATTTTTTTTCTTAGCGATCCTTGGAGGTGCATCCTCATGACTCTCAACAATCCTTTTAGTTTCTTTTGGTCTGGCTCACTTAACTAAATTTAGTTCAACCATCAATAAAATTACTTGATGGAGATCTGAAGATTTTTATGCTTTTATGTTTATGTTGGCCGTCATCATGAACCAAGAATGATTTTGATTACCACTTTGTTGAGTAAAGAAGATACTTCTGGATTTTTTTAATCTGTGCACAGACCACTGCGCCAAGCATTATTAATATCTACACTGATGTAGCGATGATATTTCTGATACTTTCTATTTCTAGACCCATGCTATCAACAAAAACATGAAAAAAGCGAGATTCTGCATTCTTACTGATTGTTACACTTTAGTTATTTGCAGGAAGAACCTCCTATAACGAGATTCCATGCTTTGATTCGTAAGTGCTGCCTTTTAAGTTTGGCTGGGAACTAATTATTATCAAGTAATAGTAAATTTTTTTTGAACTCCTGCATTTCACTCCAAACCTTTTGTCTTTGTTCTTTGAATCAGCTATCATCCAACCATGACTGTGGAAGGGATGCATGTCAAAGTCGTGGACCCAAACACTCGTAGAAACTGTTTGAGTGGATACACTTTTTTATTAGGGTCGGCACATATGGTAATGCTCTGTGTTTTCATTTCAATCTATGTCTTTCCATTGTCACATTCCTTGAGAGTTGCTGGTGTGTGTAGGCAACCTTTGATGAATGAATTATTGAAAAAAGAAGATTAGCTCTTTTTATTCTTAGTTAACCCAACAAGTAGGACTGTAGGAGTCTGAAATAAATAAATGAAGAAAAGAAAAAGGGAAATTTTAAATCAAAATTTATCAGATGCAAGTGGTATTTAGTACTATTCTTTAGGTTTCTCATTTCTGTTTGCTTATTTCTTGAAACTTAGGAAATAACTCTTTTGGTGGATTGCTTAGTCTTTCATTACTTTTGATATTCAATTTCCCATCTTTTAGCAGTACAAGTATGGGGATCGGTTGAAGATGTTATTGCAACAAGTTGGTGGTGCAAATGTTTTGTCTATCGAGGACTTCTCTTCAGATAGCCAAGTACGAGGCCTTATCTCTTTTCACGTATTACTGTATCCATTCTTTCCTAATTGTTTGACTAATTTCATGTAAAAATATTCTAATTCACATTATTTCTGACACCAATATGGTTTTATGATTGACAATATGAACTGCATTACATACTTAAAAGCGTTTGAATTCTAGGACTGAGTCTTATGAATAATACATGCTTACACTTCATCAATTTGTTGACATTCAAATAGCATATGATAGATGTTTCAATATTGCAATAAGGCGTAACTGGCAGGACATGGGGCCATAAGTATTGATTATAAAAACCATATATATATACACACACACACATAATATCCATACCAATTGAATAATAATTGCAATTCAAACGGCAAGGCTTAAGGTGTGAACAGTGTTTGAAAATATGTCTCAATGGCGCTTTATGTGGTCTTTGATAATTTGATTAGATTAAATTTAACGGCTTGAGGTCTTTATTTCATTTCTTTTGTTTATCTCAGCTCTGTGAACCTGGTGTTTGTTGGGCAATTGATTTGTATGTTAATTATTGTAGGACTTTGGTAATGGAGAAAATGTTCGAGTAGTATTTGTTATTCCTGGAGGATCAGCAGAAAAGTTGGGTTCATCCTATAAGGTTGATTCTTATTATAAAATAACTGAGTTGGTTTTAATATCTTCTGTTTTGAGTGGAAAGCTGGACAGAGACAATTTGATATCACCCTGTGGTAAGTAGTCTTCCTCACTACTAGTTTCATATGTAGTATATTACTCATTGTGATAATTGATAAAGAATTTATTTTTTCTTCATTTTAACTTCATTCATCTAACTGAATATAAAGTTTACTTGCAGAGCCAGGTTCCTCTACATGCTCCACTGATGAAACCGTGGTAGCAGAATCCGATCTCGAAGCAGAAACAGATAAACCAGTTGTTTCCAATGTCCAAGGGCCACATGAATATTTAAGCAAACCAGAGGTGTCCATTGACAATGCTGCTACTGGATCAACAGGTGGCCATGAAACGTTTAAAAATAGTTACAGTGGTGTCGAAATGAGAAAAGACAAGGTCGATGAATCCGACAACAGAAATATAGACATTATATACAGTCAAAATTTAATTGTGCAGCATGCGACGAAACCCTCCTCTATAGTTACTGCAGAAAACAGTGGAATTACAAACTTCAAACGCTTTAGAAAGGTATTACTATTAGCCTTTGAATGTCTTATTCTGCACCATTTCGTTTTTACTGGTGTGCAAATTACTGCTCGATATTGAGGAAATCTTAACCGTAACCTCTTATTATGCCATTAGATCAATACTGATGCACGTTGATCAACCATTGTATGCTTTTGCTATCTTAAACGATGAACCAAATGATGATCATGATCATATTAGCATTCAACTGTTAGAATATGGATTTAAGTAGAAACATAGTATTATTGGCTTAAATATGCTTAGCAGTGGAAAGTTTCTTGTGTTGTTGTCACATGGAGAAAAATGTTATGGCAGTTGATACGTACTTTCAACTTTTTTTGCAGAGAGAAACTGACTCTGGGAATAGCTTTTATAATCTCGTTCCATTTGATAAGTATCCTTACAGGCAAGTGTTTCTCTTGCTTTCTTTCTTTTCTTTTCTTTTTAAAACGGGGACCACTCTTTGCATGATACTCAAAGCGCACTAAACTTGAGAAGCTTCGCCCACTCAAGGACATCCATAGGAAAATAATGGTTTTAAGTTATTAAATTTTGAACTTGATGTTTGAACTCTTTAAGAGGTTTAAGATGGAGAGATGGTTTTAAGTCATTTGGGACGTGTTTGACGTGTAATAGAGATTGTCGTTCCGTGCTGGGGGAGGTGTTTCTGCATCCTCCTTTTCAGGACTAGAGCAGGGTCTTTTGACAAGCTTGTAACTTTGTCGTTGTGCGGGGTTGTTTGGTGGGAGAGAAATAATAGAATTTATAGAGGAGTTGTGAAGGCCCTGGGAAGTGGTTTGAGATAATATTAGATCCAATGCCTTTTCGAGGTTCTAGTCTCTCGAGCATTTTGTTATTGTTTGCTGGGTTTGATTCTTTGGATTGGAATCTTTTTTTTTTTGTTGGACTCCTCTTCTTGGGTTGCTTTTTTTTGTACGTCCTTGTATATTCTTTCATGTTTTCAATGAAAGCTTCGTTTCTCACGTTAAATTAAGATAGTATCTTCATACCTTTCAAATCCCGCACCTCCACCTCAGAATCTGATTATGTTTTAAAAACATCACCTGATATTCTTTCATGGCTTTGTAGGGATAATGGTGATGGAAGGGAGGAAATTGCAGAGTCCTTGAAAGAAGAAAGAAAGCGCAAGGAAATAGAAGCTATATCTGAAGACTTGTTTAATAACGAGAAGGTAAGTCTTTTTGCCTTATTTTAGCATCACAAGTTATACACAGGCATGCGTTAGGACATACATTTTTAACTTGACCAAATTTTAGGGAAGGCGACGAGGAATGGTTGGTTCCCTTCAACAGCTCTTTACTCGTTCTTAGAAACAGGTATTTAGCTTAGCATCAAAGAATCCTCTCCCTCTAATTACAGTACTTCAACGTGCTCGCCTCTAGCCATCGAATGAGATAGTGAATAGCTCGTCTTCCTCTCTTTGAAACAAGGGACGTTTCTGATTCTGTCGGTGCTTGAAATAGTTTAGTCTTTTCTCGGTCGGTATTTGTGGATTCGTACGAGGGGCACTTTTTGCAGGAAAATGCTATGGCCAATTTTGGGATATTGAGATACTGATCCTTCTCATTTACTACCTCCCAACCCCCACATTTCTTTTAAATTTGTAATTATTTTTTAATTTGGCTGTTGTGATGTATGCATAGTGCAAGGACTTTAAACTATGAAGTCAATATATATGTGCCTTTTGGTTTTTATTGTCTGTTTCTTCCTTTCGTCTCTAAGCGAC

mRNA sequence

ATGGTTTGGGGCTTCTTCCCCGTTGATCCTCTTTCAGGCGAGGAGAAATTCTACATTTTTGCACCTGGGAAGTATAAAGTGGGTCGTAAAGGCTGTGATTTGACTATAACAAAAGATAAAGGAGTTTCCCGCATCCATGCAGAAATAGTTGTAGATGCTATGATCTTTTTCCACAAGAGTTATTTATCTAATGTTTCCACTAAAGCGAGGATTAGCGATTGCTCCAAGTATGGTACATTTGTTAGCAGGAATTCTGGGTTGAAGGAGAAAATTCACGAGCTTCCAAAAAAAGAAGCAAGCTTGTACGATGGAGATGTGGTTTCATTTGGATCTGGCAATGCAACCTACAGGTTCTCCTTTGTGCAACTCTTGTTTTACGTTCACCATTCAGAGTCCTTCAAATTCCAACTGCTTAGGGACAAGGTTTCATCCATCGGTGCTTCTACTTCTGATGATATTAAGGAGTGTACGCATGTGCTTGTAGAGGAACTGATGCCTTTCAATGAAGCTCTAGTTGATGCCATCGTGGCTGAGAAACCTTTTGTTCTTACCAGTTGGGTTGAGGTAAAAATGTACATCATTTTATTTGCAGGAAGAACCTCCTATAACGAGATTCCATGCTTTGATTCCTATCATCCAACCATGACTGTGGAAGGGATGCATGTCAAAGTCGTGGACCCAAACACTCGTAGAAACTGTTTGAGTGGATACACTTTTTTATTAGGGTCGGCACATATGCAGTACAAGTATGGGGATCGGTTGAAGATGTTATTGCAACAAGTTGGTGGTGCAAATGTTTTGTCTATCGAGGACTTCTCTTCAGATAGCCAAGACTTTGGTAATGGAGAAAATGTTCGAGTAGTATTTGTTATTCCTGGAGGATCAGCAGAAAAGTTGGGTTCATCCTATAAGGTTGATTCTTATTATAAAATAACTGAGTTGGTTTTAATATCTTCTGTTTTGAGTGGAAAGCTGGACAGAGACAATTTGATATCACCCTGTGAGCCAGGTTCCTCTACATGCTCCACTGATGAAACCGTGGTAGCAGAATCCGATCTCGAAGCAGAAACAGATAAACCAGTTGTTTCCAATGTCCAAGGGCCACATGAATATTTAAGCAAACCAGAGGTGTCCATTGACAATGCTGCTACTGGATCAACAGGTGGCCATGAAACGTTTAAAAATAGTTACAGTGGTGTCGAAATGAGAAAAGACAAGGTCGATGAATCCGACAACAGAAATATAGACATTATATACAGTCAAAATTTAATTGTGCAGCATGCGACGAAACCCTCCTCTATAGTTACTGCAGAAAACAGTGGAATTACAAACTTCAAACGCTTTAGAAAGAGAGAAACTGACTCTGGGAATAGCTTTTATAATCTCGTTCCATTTGATAAGTATCCTTACAGGCAAAGATTGTCGTTCCGTGCTGGGGGAGGTGTTTCTGCATCCTCCTTTTCAGGACTAGAGCAGGGTCTTTTGACAAGCTTGGATAATGGTGATGGAAGGGAGGAAATTGCAGAGTCCTTGAAAGAAGAAAGAAAGCGCAAGGAAATAGAAGCTATATCTGAAGACTTGTTTAATAACGAGAAGGGAAGGCGACGAGGAATGGTTGGTTCCCTTCAACAGCTCTTTACTCGTTCTTAG

Coding sequence (CDS)

ATGGTTTGGGGCTTCTTCCCCGTTGATCCTCTTTCAGGCGAGGAGAAATTCTACATTTTTGCACCTGGGAAGTATAAAGTGGGTCGTAAAGGCTGTGATTTGACTATAACAAAAGATAAAGGAGTTTCCCGCATCCATGCAGAAATAGTTGTAGATGCTATGATCTTTTTCCACAAGAGTTATTTATCTAATGTTTCCACTAAAGCGAGGATTAGCGATTGCTCCAAGTATGGTACATTTGTTAGCAGGAATTCTGGGTTGAAGGAGAAAATTCACGAGCTTCCAAAAAAAGAAGCAAGCTTGTACGATGGAGATGTGGTTTCATTTGGATCTGGCAATGCAACCTACAGGTTCTCCTTTGTGCAACTCTTGTTTTACGTTCACCATTCAGAGTCCTTCAAATTCCAACTGCTTAGGGACAAGGTTTCATCCATCGGTGCTTCTACTTCTGATGATATTAAGGAGTGTACGCATGTGCTTGTAGAGGAACTGATGCCTTTCAATGAAGCTCTAGTTGATGCCATCGTGGCTGAGAAACCTTTTGTTCTTACCAGTTGGGTTGAGGTAAAAATGTACATCATTTTATTTGCAGGAAGAACCTCCTATAACGAGATTCCATGCTTTGATTCCTATCATCCAACCATGACTGTGGAAGGGATGCATGTCAAAGTCGTGGACCCAAACACTCGTAGAAACTGTTTGAGTGGATACACTTTTTTATTAGGGTCGGCACATATGCAGTACAAGTATGGGGATCGGTTGAAGATGTTATTGCAACAAGTTGGTGGTGCAAATGTTTTGTCTATCGAGGACTTCTCTTCAGATAGCCAAGACTTTGGTAATGGAGAAAATGTTCGAGTAGTATTTGTTATTCCTGGAGGATCAGCAGAAAAGTTGGGTTCATCCTATAAGGTTGATTCTTATTATAAAATAACTGAGTTGGTTTTAATATCTTCTGTTTTGAGTGGAAAGCTGGACAGAGACAATTTGATATCACCCTGTGAGCCAGGTTCCTCTACATGCTCCACTGATGAAACCGTGGTAGCAGAATCCGATCTCGAAGCAGAAACAGATAAACCAGTTGTTTCCAATGTCCAAGGGCCACATGAATATTTAAGCAAACCAGAGGTGTCCATTGACAATGCTGCTACTGGATCAACAGGTGGCCATGAAACGTTTAAAAATAGTTACAGTGGTGTCGAAATGAGAAAAGACAAGGTCGATGAATCCGACAACAGAAATATAGACATTATATACAGTCAAAATTTAATTGTGCAGCATGCGACGAAACCCTCCTCTATAGTTACTGCAGAAAACAGTGGAATTACAAACTTCAAACGCTTTAGAAAGAGAGAAACTGACTCTGGGAATAGCTTTTATAATCTCGTTCCATTTGATAAGTATCCTTACAGGCAAAGATTGTCGTTCCGTGCTGGGGGAGGTGTTTCTGCATCCTCCTTTTCAGGACTAGAGCAGGGTCTTTTGACAAGCTTGGATAATGGTGATGGAAGGGAGGAAATTGCAGAGTCCTTGAAAGAAGAAAGAAAGCGCAAGGAAATAGAAGCTATATCTGAAGACTTGTTTAATAACGAGAAGGGAAGGCGACGAGGAATGGTTGGTTCCCTTCAACAGCTCTTTACTCGTTCTTAG

Protein sequence

MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFFHKSYLSNVSTKARISDCSKYGTFVSRNSGLKEKIHELPKKEASLYDGDVVSFGSGNATYRFSFVQLLFYVHHSESFKFQLLRDKVSSIGASTSDDIKECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVEVKMYIILFAGRTSYNEIPCFDSYHPTMTVEGMHVKVVDPNTRRNCLSGYTFLLGSAHMQYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENVRVVFVIPGGSAEKLGSSYKVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVVSNVQGPHEYLSKPEVSIDNAATGSTGGHETFKNSYSGVEMRKDKVDESDNRNIDIIYSQNLIVQHATKPSSIVTAENSGITNFKRFRKRETDSGNSFYNLVPFDKYPYRQRLSFRAGGGVSASSFSGLEQGLLTSLDNGDGREEIAESLKEERKRKEIEAISEDLFNNEKGRRRGMVGSLQQLFTRS

Homology

[Close]

BLAST of Spg038765 vs. NCBI nr
Match: KAG6607018.1 (Nijmegen breakage syndrome 1 protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 913.3 bits (2359), Expect = 1.0e-261
Identity = 475/558 (85.13%), Postives = 495/558 (88.71%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFF--H 60
           MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIF   H
Sbjct: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH 60

Query: 61  KSYLSNVSTKARISDCSKYGTFVSRNSGLKEKIHELPKKEASLYDGDVVSFGSGNATYRF 120
           KSYLSNVS+K RISDCSKYGTFVSR SGLKEKIHELPKKEASLYDGDV+SFGSGNATYRF
Sbjct: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120

Query: 121 SFVQLLFYVHHSESFKFQLLRDKVSSIGASTSDDIKECTHVLVEELMPFNEALVDAIVAE 180
           SFVQL+FYVHHS SF+FQLLRDKVSSIGASTS DI+ECTHVLVEELMPF+EALVDAIVAE
Sbjct: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180

Query: 181 KPFVLTSWVEVKMYIILFAGRTSYNEIPCFDSYHPTMTVEGMHVKVVDPNTRRNCLSGYT 240
           KPFV+TSWVE      LFAGRTS NEIPCFDSYHPTMTVEGMHVKVVDPNTR+NCLSGYT
Sbjct: 181 KPFVITSWVE------LFAGRTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYT 240

Query: 241 FLLGSAHMQYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENVRVVFVIPGGSAEK 300
           FLLGSAHM YKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGEN RVVF+IPGG AEK
Sbjct: 241 FLLGSAHM-YKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEK 300

Query: 301 LGSSYKVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETD 360
           LGSSYKVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETD
Sbjct: 301 LGSSYKVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETD 360

Query: 361 KPVVSNVQG-------PHEYLSKPEVSIDNAATGSTGGHETFKNSYSGVEMRKDKVDESD 420
           KPV SNVQG       P E+LSKPEVSID+A +GS GGH+TF+NSYSGV+MR DKVDESD
Sbjct: 361 KPVASNVQGSDEHLGIPDEHLSKPEVSIDHADSGSAGGHKTFRNSYSGVKMRNDKVDESD 420

Query: 421 NRNIDIIYSQNLIVQHATKPSSIVTAENSGITNFKRFRKRETDSGNSFYNLVPFDKYPYR 480
           N NIDII++QNLIVQH  KPSSIVTAE+ GITNFKRFRK ET SGNSFYNLVPFDKYPY+
Sbjct: 421 NSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYPYK 480

Query: 481 QRLSFRAGGGVSASSFSGLEQGLLTSLDNGDGREEIAESLKEERKRKEIEAISEDLFNNE 540
                                      DNGDGREEIAESLKEERKRKE+EAISEDLFNNE
Sbjct: 481 ---------------------------DNGDGREEIAESLKEERKRKEMEAISEDLFNNE 524

Query: 541 KGRRRGMVGSLQQLFTRS 550
           KGRRRGMVGSLQQL TRS
Sbjct: 541 KGRRRGMVGSLQQLLTRS 524

[Close]

BLAST of Spg038765 vs. NCBI nr
Match: XP_022949548.1 (nijmegen breakage syndrome 1 protein [Cucurbita moschata])

HSP 1 Score: 912.5 bits (2357), Expect = 1.7e-261
Identity = 475/558 (85.13%), Postives = 496/558 (88.89%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFF--H 60
           MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIF   H
Sbjct: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH 60

Query: 61  KSYLSNVSTKARISDCSKYGTFVSRNSGLKEKIHELPKKEASLYDGDVVSFGSGNATYRF 120
           KSYLSNVS+K RISDCSKYGTFVSR SGLKEKIHELPKKEASLYDGDV+SFGSGNATYRF
Sbjct: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120

Query: 121 SFVQLLFYVHHSESFKFQLLRDKVSSIGASTSDDIKECTHVLVEELMPFNEALVDAIVAE 180
           SFVQL+FYVHHS SF+FQLLRDKVSSIGASTS DI+ECTHVLVEELMPF+EALVDAIVAE
Sbjct: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180

Query: 181 KPFVLTSWVEVKMYIILFAGRTSYNEIPCFDSYHPTMTVEGMHVKVVDPNTRRNCLSGYT 240
           KPFV+TSWVE      LFAGRTS NEIPCFDSY+PTMTVEGMHVKVVDPNTR+NCLSGYT
Sbjct: 181 KPFVITSWVE------LFAGRTSCNEIPCFDSYYPTMTVEGMHVKVVDPNTRKNCLSGYT 240

Query: 241 FLLGSAHMQYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENVRVVFVIPGGSAEK 300
           FLLGSAHM YKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGEN RVVF+IPGG AEK
Sbjct: 241 FLLGSAHM-YKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEK 300

Query: 301 LGSSYKVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETD 360
           LGSSYKVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETD
Sbjct: 301 LGSSYKVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETD 360

Query: 361 KPVVSNVQG-------PHEYLSKPEVSIDNAATGSTGGHETFKNSYSGVEMRKDKVDESD 420
           KPV SNVQG       P E+LSKPEVSID+A +GS GGH+TF+NSYSGV+MR DKVDESD
Sbjct: 361 KPVASNVQGSDEHLGIPDEHLSKPEVSIDHADSGSAGGHKTFRNSYSGVKMRNDKVDESD 420

Query: 421 NRNIDIIYSQNLIVQHATKPSSIVTAENSGITNFKRFRKRETDSGNSFYNLVPFDKYPYR 480
           N NIDII++QNLIVQH  KPSSIVTAE+SGITNFKRFRK ET SGNSFYNLVPFDKYPY+
Sbjct: 421 NSNIDIIFTQNLIVQHVMKPSSIVTAEDSGITNFKRFRKTETHSGNSFYNLVPFDKYPYK 480

Query: 481 QRLSFRAGGGVSASSFSGLEQGLLTSLDNGDGREEIAESLKEERKRKEIEAISEDLFNNE 540
                                      DNGDGREEIAESLKEERKRKE+EAISEDLFNNE
Sbjct: 481 ---------------------------DNGDGREEIAESLKEERKRKEMEAISEDLFNNE 524

Query: 541 KGRRRGMVGSLQQLFTRS 550
           KGRRRGMVGSLQQL TRS
Sbjct: 541 KGRRRGMVGSLQQLLTRS 524

[Close]

BLAST of Spg038765 vs. NCBI nr
Match: XP_023521477.1 (nijmegen breakage syndrome 1 protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 908.7 bits (2347), Expect = 2.5e-260
Identity = 473/565 (83.72%), Postives = 495/565 (87.61%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFF--H 60
           MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIF   H
Sbjct: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH 60

Query: 61  KSYLSNVSTKARISDCSKYGTFVSRNSGLKEKIHELPKKEASLYDGDVVSFGSGNATYRF 120
           KSYLSNVS+K RISDCSKYGTFVSRNSGLKEKIHELPKKEASLYDGDV+SFGSGNATYRF
Sbjct: 61  KSYLSNVSSKVRISDCSKYGTFVSRNSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120

Query: 121 SFVQLLFYVHHSESFKFQLLRDKVSSIGASTSDDIKECTHVLVEELMPFNEALVDAIVAE 180
           SFVQL+FYVHHS SF+FQLLRDKVSSIGASTS DI+ECTHVLVEELMPF+EALVDAIVAE
Sbjct: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180

Query: 181 KPFVLTSWVEVKMYIILFAGRTSYNEIPCFDSYHPTMTVEGMHVKVVDPNTRRNCLSGYT 240
           KPFV+TSWVE      LFAGRTS NEIPCFDSYHPTMTVEGMHVKVVDPNTR+NCLSGYT
Sbjct: 181 KPFVITSWVE------LFAGRTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYT 240

Query: 241 FLLGSAHMQYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENVRVVFVIPGGSAEK 300
           FLLGSAHM YK+GDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGEN RVVF+IPGG AEK
Sbjct: 241 FLLGSAHM-YKHGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEK 300

Query: 301 LGSSYKVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETD 360
           LGSSYKVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETD
Sbjct: 301 LGSSYKVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETD 360

Query: 361 KPVVSNVQG--------------PHEYLSKPEVSIDNAATGSTGGHETFKNSYSGVEMRK 420
           KPV SNVQG              P +YLSKPEVSID+AA+GS G H+TF+NSYSGV+MR 
Sbjct: 361 KPVASNVQGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRN 420

Query: 421 DKVDESDNRNIDIIYSQNLIVQHATKPSSIVTAENSGITNFKRFRKRETDSGNSFYNLVP 480
           DKVDESDN NIDII++QNLI QH  KPSSIVTAE+ GITNFKRFRK ET SGNSFYNLVP
Sbjct: 421 DKVDESDNSNIDIIFTQNLIAQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVP 480

Query: 481 FDKYPYRQRLSFRAGGGVSASSFSGLEQGLLTSLDNGDGREEIAESLKEERKRKEIEAIS 540
           FDKYPY+                           DNGDGREEIAESLKEERKRKE+EAIS
Sbjct: 481 FDKYPYK---------------------------DNGDGREEIAESLKEERKRKEMEAIS 531

Query: 541 EDLFNNEKGRRRGMVGSLQQLFTRS 550
           EDLFNNEKGRRRGMVGSLQ+L TRS
Sbjct: 541 EDLFNNEKGRRRGMVGSLQRLLTRS 531

[Close]

BLAST of Spg038765 vs. NCBI nr
Match: XP_022998557.1 (nijmegen breakage syndrome 1 protein isoform X2 [Cucurbita maxima])

HSP 1 Score: 902.9 bits (2332), Expect = 1.4e-258
Identity = 470/565 (83.19%), Postives = 492/565 (87.08%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFF--H 60
           MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIF   H
Sbjct: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSH 60

Query: 61  KSYLSNVSTKARISDCSKYGTFVSRNSGLKEKIHELPKKEASLYDGDVVSFGSGNATYRF 120
           KSYLSNVS+K RISDCSKYGTFVSR SGLKEKIHELPKKEASLYDGDV+SFGSGNATYRF
Sbjct: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120

Query: 121 SFVQLLFYVHHSESFKFQLLRDKVSSIGASTSDDIKECTHVLVEELMPFNEALVDAIVAE 180
           SFVQL+FYVHHS SF+FQLLRDKVSSIGASTS DI+ECTHVLVEELMPF+EALVDAIVAE
Sbjct: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180

Query: 181 KPFVLTSWVEVKMYIILFAGRTSYNEIPCFDSYHPTMTVEGMHVKVVDPNTRRNCLSGYT 240
           KPFV+TSWVE      LFAG+TS NEIPCFDSYHPTMTVEGMHVKVVDPNTR+NCLSGY 
Sbjct: 181 KPFVITSWVE------LFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYI 240

Query: 241 FLLGSAHMQYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENVRVVFVIPGGSAEK 300
           FLLGSAHM YKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGEN RVVF+IPGG AEK
Sbjct: 241 FLLGSAHM-YKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEK 300

Query: 301 LGSSYKVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETD 360
           LGSSYKVDSYYKI ELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETD
Sbjct: 301 LGSSYKVDSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETD 360

Query: 361 KPVVSNVQG--------------PHEYLSKPEVSIDNAATGSTGGHETFKNSYSGVEMRK 420
           KPV SNVQG              P +YLSKPEVSID+AA+GS G H+TF+NSYSGV+MR 
Sbjct: 361 KPVASNVQGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRN 420

Query: 421 DKVDESDNRNIDIIYSQNLIVQHATKPSSIVTAENSGITNFKRFRKRETDSGNSFYNLVP 480
           D+VDESDN NIDII++QNLIVQH  KPSSIVTAE+ GITNFKRFRK ET SGNSFYNLVP
Sbjct: 421 DQVDESDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVP 480

Query: 481 FDKYPYRQRLSFRAGGGVSASSFSGLEQGLLTSLDNGDGREEIAESLKEERKRKEIEAIS 540
           FDKYPY+                           DNGDGREEIAESLKEERKRKE+EAIS
Sbjct: 481 FDKYPYK---------------------------DNGDGREEIAESLKEERKRKEMEAIS 531

Query: 541 EDLFNNEKGRRRGMVGSLQQLFTRS 550
           EDLFNNEKGRRRGM GSLQQL TRS
Sbjct: 541 EDLFNNEKGRRRGMAGSLQQLLTRS 531

[Close]

BLAST of Spg038765 vs. NCBI nr
Match: XP_022998556.1 (nijmegen breakage syndrome 1 protein isoform X1 [Cucurbita maxima])

HSP 1 Score: 897.9 bits (2319), Expect = 4.4e-257
Identity = 470/567 (82.89%), Postives = 492/567 (86.77%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFF--H 60
           MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIF   H
Sbjct: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSH 60

Query: 61  KSYLSNVSTKARISDCSKYGTFVSRNSGLKEKIHELPKKEASLYDGDVVSFGSGNATYRF 120
           KSYLSNVS+K RISDCSKYGTFVSR SGLKEKIHELPKKEASLYDGDV+SFGSGNATYRF
Sbjct: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120

Query: 121 SFVQLLFYVHHSESFKFQLLRDKVSSIGASTSDDIKECTHVLVEELMPFNEALVDAIVAE 180
           SFVQL+FYVHHS SF+FQLLRDKVSSIGASTS DI+ECTHVLVEELMPF+EALVDAIVAE
Sbjct: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180

Query: 181 KPFVLTSWVEVKMYIILFAGRTSYNEIPCFDSYHPTMTVEGMHVKVVDPNTRRNCLSGYT 240
           KPFV+TSWVE      LFAG+TS NEIPCFDSYHPTMTVEGMHVKVVDPNTR+NCLSGY 
Sbjct: 181 KPFVITSWVE------LFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYI 240

Query: 241 FLLGSAHMQYKYGDRLKMLLQQVGGANVLSIEDFSSDSQ--DFGNGENVRVVFVIPGGSA 300
           FLLGSAHM YKYGDRLKMLLQQVGGANVLSIEDFSSDSQ  DFGNGEN RVVF+IPGG A
Sbjct: 241 FLLGSAHM-YKYGDRLKMLLQQVGGANVLSIEDFSSDSQNEDFGNGENERVVFIIPGGLA 300

Query: 301 EKLGSSYKVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAE 360
           EKLGSSYKVDSYYKI ELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAE
Sbjct: 301 EKLGSSYKVDSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAE 360

Query: 361 TDKPVVSNVQG--------------PHEYLSKPEVSIDNAATGSTGGHETFKNSYSGVEM 420
           TDKPV SNVQG              P +YLSKPEVSID+AA+GS G H+TF+NSYSGV+M
Sbjct: 361 TDKPVASNVQGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKM 420

Query: 421 RKDKVDESDNRNIDIIYSQNLIVQHATKPSSIVTAENSGITNFKRFRKRETDSGNSFYNL 480
           R D+VDESDN NIDII++QNLIVQH  KPSSIVTAE+ GITNFKRFRK ET SGNSFYNL
Sbjct: 421 RNDQVDESDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNL 480

Query: 481 VPFDKYPYRQRLSFRAGGGVSASSFSGLEQGLLTSLDNGDGREEIAESLKEERKRKEIEA 540
           VPFDKYPY+                           DNGDGREEIAESLKEERKRKE+EA
Sbjct: 481 VPFDKYPYK---------------------------DNGDGREEIAESLKEERKRKEMEA 533

Query: 541 ISEDLFNNEKGRRRGMVGSLQQLFTRS 550
           ISEDLFNNEKGRRRGM GSLQQL TRS
Sbjct: 541 ISEDLFNNEKGRRRGMAGSLQQLLTRS 533

[Close]

BLAST of Spg038765 vs. ExPASy Swiss-Prot
Match: Q0H8D7 (Nijmegen breakage syndrome 1 protein OS=Arabidopsis thaliana OX=3702 GN=NBS1 PE=1 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 3.6e-105
Identity = 237/579 (40.93%), Postives = 330/579 (56.99%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFF--- 60
           MVWG FPVDPLSGE+K+YIF+ G YKVGRKGCD+ I KDKGVSRIHAE+  DA       
Sbjct: 1   MVWGLFPVDPLSGEDKYYIFSKGIYKVGRKGCDIIINKDKGVSRIHAELTFDATTVSTSR 60

Query: 61  -HKSYLSNVSTKARISDCSKYGTFVSRNSGLKEKIHELPKKEASLYDGDVVSFGSGNATY 120
            +KS     S   R+ DCSKYGTFV  + G K+K+HEL  KE  L DGDV++FG+G+A Y
Sbjct: 61  RNKSSSDTSSFVIRVKDCSKYGTFVKTDLGTKDKVHELSNKEKILQDGDVIAFGTGSAIY 120

Query: 121 RFSFVQLLFYV-HHSESFKF-QLLRDKVSSIGASTSDDI-KECTHVLVEELMPFNEALVD 180
           R S + L+FY+   SE+FK  Q ++D VSSIGA  S  + +ECTHVL+E  M  NEAL++
Sbjct: 121 RLSLIPLVFYLCPSSETFKVDQPVQDAVSSIGARISPTLSEECTHVLLEPRMQVNEALIN 180

Query: 181 AIVAEKPFVLTSWVEVKMYIILFAGRTSYNEIPCFDSYHPTMTVEGMHVKVVDPNTRRNC 240
           AI+A+K  +LT+WV      +L A ++  +EIP +  Y P++ VE   V V++ N R  C
Sbjct: 181 AILAKKTIILTNWV------MLLAEKSICSEIPGYSQYRPSVMVEEALVDVLELNVREKC 240

Query: 241 LSGYTFLLGSAHMQYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENVRVVFVIPG 300
           L G+TF+L      Y++G     LL +V GA  ++IED SS SQD   GE  R++ VIP 
Sbjct: 241 LEGFTFVLEPTD-TYRFGCSFPSLL-EVCGAETVTIEDISSMSQDSQFGEINRMICVIPK 300

Query: 301 GSAEKLGSSYKVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDL 360
            + +K G    +    ++ E+ L+ +V SG L   +LI P    SS+CSTDETVVA+S+ 
Sbjct: 301 SAGDKFGRFKHLSLLSRVNEMDLVCAVFSGNLPSTSLIPPSVVISSSCSTDETVVADSEA 360

Query: 361 EAETDKPVVSNVQGPH--EYLSKPEV---------------------SIDNAATGSTGGH 420
           E E     V  +      E   KP                       S++  A   + GH
Sbjct: 361 EEEETTSSVHMIDATEKAETPEKPAAIVIEDSPVTILEETSNLNEFKSVNLLADTESRGH 420

Query: 421 ETFKNSYSGVEMRKDKVDESDNRNIDIIYSQNLIVQHATKPSSIVTAENSGITNFKRFRK 480
              KNS   V +R+D+ DE++    +IIY+Q+LIV+       + +    G+ +FKRFRK
Sbjct: 421 MDEKNSSDSVTIRRDRNDEAETGKSEIIYTQDLIVRDLRSTRKVQSTGGEGVVDFKRFRK 480

Query: 481 RETDSGNSFYNLVPFDKYPYRQRLSFRAGGGVSASSFSGLEQGLLTSLDNGDGREEIAES 540
                GNSF +L+PF K PY++  S+                             ++ + 
Sbjct: 481 GNVTCGNSFSSLIPFAKDPYKEYDSW-----------------------------DVTDF 540

Query: 541 LKEERKRKEIEAISEDLFNNEKGRRRGMVGSLQQLFTRS 550
           +KEE+KRK++EAI+EDLF  EK R+RG  GS++   + S
Sbjct: 541 MKEEKKRKQMEAIAEDLFKTEKARKRGTAGSIRGFLSGS 542

[Close]

BLAST of Spg038765 vs. ExPASy Swiss-Prot
Match: Q7XD82 (Nijmegen breakage syndrome 1 protein OS=Oryza sativa subsp. japonica OX=39947 GN=NBS1 PE=1 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 5.3e-80
Identity = 203/588 (34.52%), Postives = 320/588 (54.42%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFFH-K 60
           MVW   PVD + G ++ YIFA G YKVGRK CD+ +  D  +SR+HAEIVV+ M+ +  +
Sbjct: 1   MVWALTPVDTVRGAQRCYIFAAGTYKVGRKDCDVIVQTDTSISRVHAEIVVEKMVAWDPQ 60

Query: 61  SYLSNVSTKARISDCSKYGTFVSRNSGLK-EKIHELPKKEASLYDGDVVSFGSGNATYRF 120
           S      +  R+ D SKYGTF ++  G +  ++H+   ++A L DGD V+FG+GNAT+R 
Sbjct: 61  SGAPANPSYVRVVDRSKYGTFFNKVQGTQGSRLHK--DEDAMLADGDTVTFGTGNATFRL 120

Query: 121 SFVQLLFYVHHSESFKFQ-LLRDKVSSIGA-STSDDIKECTHVLVEELMPFNEALVDAIV 180
           SFV ++ + H  +S +    L+  ++SIGA +T     ECTHVLV+E       L+DA++
Sbjct: 121 SFVPIVVFFHGKKSGRISPCLQAVMTSIGAYATRKWSDECTHVLVDESCSLTPELLDAVL 180

Query: 181 AEKPFVLTSWVEVKMYIILFAGRTSYNEIPCFDSYHPTMTVEGMHVKVVDPNTRRNCLSG 240
           A+K  VL  W +V       A +  + E+P    Y P +T++GM ++VV+     +CL+G
Sbjct: 181 AKKQIVLGDWFKV------MAEKNIHTEMPSSTQYIPKLTLDGMEIQVVEIKLIESCLAG 240

Query: 241 YTFLLGSAHMQYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENVRVVFVIPGGSA 300
           YTF+LGS+  +YK+GD+L  LL+   GA  L +++F ++SQD G GEN + + ++P  S 
Sbjct: 241 YTFILGSSE-KYKFGDKLHALLEST-GAKYLHVDEFCANSQDSGAGENDKDILLVPAKSP 300

Query: 301 EKLGSSYKVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAE 360
            +      +    KIT++ L +++LSG L+   +  P    +S+ STDET+V +SD+E +
Sbjct: 301 LEFSKIRGLFPLSKITDVKLFAAILSGHLEATAIEPPAYIVASSNSTDETIVVDSDVEID 360

Query: 361 T---DKPVVSNVQGPH-EYLS---KPEVSIDNAATGSTGGHETFKNSYSGVE-------- 420
           T   D  V ++    H E++S   K  V+I      +    +T  N +S  E        
Sbjct: 361 TATSDHTVAASKSEHHIEHISDDKKEVVAISEEDAVNLVEAKTSINLHSDQEKDEIVKPM 420

Query: 421 ----------------------------MRKDKVDESDNRNIDIIYSQNLIVQHATKPSS 480
                                       + KD+  +S +    +IY+QNL+V+   + + 
Sbjct: 421 EEDVKVIEKTATMRGFKVEGEDIPVMTKVPKDETLDSRDETCHVIYTQNLVVKSILQSAR 480

Query: 481 IVTAENSGITNFKRFRKRETDSGNSFYNLVPFDKYPYRQRLSFRAGGGVSASSFSGLEQG 540
             + E  GI NFKRFRKR   SGNSF +L+P+ + PYR+               S  E+G
Sbjct: 481 AESIETGGI-NFKRFRKRGAVSGNSFKDLIPYSREPYRE---------------SDYERG 540

Query: 541 LLTSLDNGDGREEIAESLKEERKRKEIEAISEDLFNNEKGRRRGMVGS 542
            +T            + ++EE+KR+++EAI+EDLFNN K +++   GS
Sbjct: 541 TVT------------DFMREEKKRRQMEAIAEDLFNNAKPKKKAAAGS 550

[Close]

BLAST of Spg038765 vs. ExPASy Swiss-Prot
Match: B8BHK8 (Nijmegen breakage syndrome 1 protein OS=Oryza sativa subsp. indica OX=39946 GN=NBS1 PE=2 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.4e-77
Identity = 197/588 (33.50%), Postives = 314/588 (53.40%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFFH-K 60
           MVW   PVD + G ++ YIFA G YKVGRK CD+ +  D  +SR+HAEIVV+ M+ +  +
Sbjct: 1   MVWALTPVDTVRGAQRCYIFAAGTYKVGRKDCDVIVQTDTSISRVHAEIVVEKMVAWDPQ 60

Query: 61  SYLSNVSTKARISDCSKYGTFVSRNSGLK-EKIHELPKKEASLYDGDVVSFGSGNATYRF 120
           S      +  R+ D SKYGTF ++  G +  ++H+   ++A L DGD V+FG+G+AT+R 
Sbjct: 61  SGAPANPSYVRVVDRSKYGTFFNKVQGTQGSRLHK--DEDAMLADGDTVTFGTGSATFRL 120

Query: 121 SFVQLLFYVHHSESFKFQ-LLRDKVSSIGA-STSDDIKECTHVLVEELMPFNEALVDAIV 180
           SFV ++ + H  +S +    L+  ++SIGA +T     ECTHVLV+E       L+DA++
Sbjct: 121 SFVPIVVFFHGKKSGRISPSLQAVMTSIGAYATRKWSDECTHVLVDESCSLTPELLDAVL 180

Query: 181 AEKPFVLTSWVEVKMYIILFAGRTSYNEIPCFDSYHPTMTVEGMHVKVVDPNTRRNCLSG 240
           A+K  VL  W +V       A +  +  +P    Y P +T++GM ++VV+     +CL+G
Sbjct: 181 AKKQIVLGDWFKV------MAEKNIHTAMPSSTQYIPKLTLDGMEIQVVEIKLIESCLAG 240

Query: 241 YTFLLGSAHMQYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENVRVVFVIPGGSA 300
           YTF+LGS+  +YK+GD+L  LL+   GA  L +++F ++SQD G GEN + + ++P  S 
Sbjct: 241 YTFILGSSE-KYKFGDKLHALLEST-GAKYLHVDEFCANSQDSGAGENDKDILLVPAKSP 300

Query: 301 EKLGSSYKVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAE 360
            +      +    KIT++ L +++LSG L+   +  P    +S+ STDET+V +SD+E +
Sbjct: 301 LEFSKISGLFPLSKITDVKLFAAILSGHLEATAIEPPAYIVASSNSTDETIVVDSDVEID 360

Query: 361 T------------------------------DKPVVSNVQGP-----HEYLSKPEV---- 420
           T                              ++  V+ V+       H Y  K E+    
Sbjct: 361 TATSDHTVAASKSEHHIEHISDDKKEVVAISEEDAVNLVEAKTSINLHSYQEKDEIVKPM 420

Query: 421 SIDNAATGSTGGHETFKNSYSGV----EMRKDKVDESDNRNIDIIYSQNLIVQHATKPSS 480
             D      T     FK     +    ++ KD+  +S +    +IY+QNL+V+   + + 
Sbjct: 421 EEDVKVIEKTATMRGFKVEGEDIPVMTKVPKDETLDSRDETCHVIYTQNLVVKSILQSAR 480

Query: 481 IVTAENSGITNFKRFRKRETDSGNSFYNLVPFDKYPYRQRLSFRAGGGVSASSFSGLEQG 540
             + E  GI NFKRFRKR   SGNSF +L+P+ + PYR+            S +      
Sbjct: 481 AESIETGGI-NFKRFRKRGAVSGNSFKDLIPYSREPYRE------------SDYK----- 540

Query: 541 LLTSLDNGDGREEIAESLKEERKRKEIEAISEDLFNNEKGRRRGMVGS 542
                     R  + + ++EE+KR+++EAI+EDLFNN K +++   GS
Sbjct: 541 ----------RGTVIDFMREEKKRRQMEAIAEDLFNNAKPKKKAAAGS 550

[Close]

BLAST of Spg038765 vs. ExPASy Swiss-Prot
Match: Q5I2W8 (Nibrin OS=Danio rerio OX=7955 GN=nbn PE=2 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 5.0e-06
Identity = 92/402 (22.89%), Postives = 154/402 (38.31%), Query Frame = 0


Query: 2   VWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFFHKSY 61
           +W   P +  SG E   + A  +Y VGRK C++ +T D+ +SR+HA + V          
Sbjct: 1   MWKLQPTE--SGGESVILLAGQEYVVGRKNCEILLTNDQSISRVHAVLTV---------- 60

Query: 62  LSNVSTKARISDCSKYGTFVSRNSGLKEKIHELPKKEASLYDGDVVSFGSGNATYRFSFV 121
                    + D SKYGTFV+      EK+     K  +L  G  ++FG   +  +FS  
Sbjct: 61  ---TEQAVTLKDSSKYGTFVN-----GEKLESGSTK--TLQTGYKITFGVFQS--KFSLE 120

Query: 122 QLLFYVHHS---ESFKFQLLRDKVSSIGASTSDDIKECTHVLVEELMPFNEALVDAIVAE 181
           +    V  S      K  L +D  S  G   S    +CTH LV   +      + A++  
Sbjct: 121 KECIVVCSSCVDNEGKVTLSQDIRSVGGRLVSSWTSDCTH-LVMPTVKVTIKTICALLCC 180

Query: 182 KPFVLTSWVEVKMYIILFAGRTSYNEIPCFDSYHPTMTVEGMHVKVVDPNT---RRNCLS 241
           +P V  ++     +  L         +P  + + P +    +    VD +    R++   
Sbjct: 181 RPIVKPAF-----FSALSKAVQQKLPLPKAERFRPQIDEPSLARDDVDLSARPERKSLFK 240

Query: 242 GYTFL-LGSAHMQ-----YKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENVRVVF 301
           G TFL L S  M+        G  +  LL + G   V  +E  S+   D  +G +  V+ 
Sbjct: 241 GKTFLFLSSKQMKRLSVAVSCGGGVSQLLDE-GALPVSLLESSSTCVLDMISGNSQPVIS 300

Query: 302 VIPGGSAEKLGSSYKVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVA 361
                  + +G          ITE  +   + +  +      +PC    S       V A
Sbjct: 301 PASKKWLDSVGQILHRKGLRFITESEV--GLAAIHVSNQTYCNPCSSLQSESVKTNPVFA 360

Query: 362 ESDLEAET---DKPVVSNVQGPHEYLSKPEVSIDNAATGSTG 389
            + L   T   +  + +  Q    Y+   E+S D +   ++G
Sbjct: 361 SATLSQSTAVDETALAAPSQNITAYVVNTEISQDQSRMVTSG 369

[Close]

BLAST of Spg038765 vs. ExPASy TrEMBL
Match: A0A6J1GCD8 (nijmegen breakage syndrome 1 protein OS=Cucurbita moschata OX=3662 GN=LOC111452863 PE=4 SV=1)

HSP 1 Score: 912.5 bits (2357), Expect = 8.3e-262
Identity = 475/558 (85.13%), Postives = 496/558 (88.89%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFF--H 60
           MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIF   H
Sbjct: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH 60

Query: 61  KSYLSNVSTKARISDCSKYGTFVSRNSGLKEKIHELPKKEASLYDGDVVSFGSGNATYRF 120
           KSYLSNVS+K RISDCSKYGTFVSR SGLKEKIHELPKKEASLYDGDV+SFGSGNATYRF
Sbjct: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120

Query: 121 SFVQLLFYVHHSESFKFQLLRDKVSSIGASTSDDIKECTHVLVEELMPFNEALVDAIVAE 180
           SFVQL+FYVHHS SF+FQLLRDKVSSIGASTS DI+ECTHVLVEELMPF+EALVDAIVAE
Sbjct: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180

Query: 181 KPFVLTSWVEVKMYIILFAGRTSYNEIPCFDSYHPTMTVEGMHVKVVDPNTRRNCLSGYT 240
           KPFV+TSWVE      LFAGRTS NEIPCFDSY+PTMTVEGMHVKVVDPNTR+NCLSGYT
Sbjct: 181 KPFVITSWVE------LFAGRTSCNEIPCFDSYYPTMTVEGMHVKVVDPNTRKNCLSGYT 240

Query: 241 FLLGSAHMQYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENVRVVFVIPGGSAEK 300
           FLLGSAHM YKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGEN RVVF+IPGG AEK
Sbjct: 241 FLLGSAHM-YKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEK 300

Query: 301 LGSSYKVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETD 360
           LGSSYKVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETD
Sbjct: 301 LGSSYKVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETD 360

Query: 361 KPVVSNVQG-------PHEYLSKPEVSIDNAATGSTGGHETFKNSYSGVEMRKDKVDESD 420
           KPV SNVQG       P E+LSKPEVSID+A +GS GGH+TF+NSYSGV+MR DKVDESD
Sbjct: 361 KPVASNVQGSDEHLGIPDEHLSKPEVSIDHADSGSAGGHKTFRNSYSGVKMRNDKVDESD 420

Query: 421 NRNIDIIYSQNLIVQHATKPSSIVTAENSGITNFKRFRKRETDSGNSFYNLVPFDKYPYR 480
           N NIDII++QNLIVQH  KPSSIVTAE+SGITNFKRFRK ET SGNSFYNLVPFDKYPY+
Sbjct: 421 NSNIDIIFTQNLIVQHVMKPSSIVTAEDSGITNFKRFRKTETHSGNSFYNLVPFDKYPYK 480

Query: 481 QRLSFRAGGGVSASSFSGLEQGLLTSLDNGDGREEIAESLKEERKRKEIEAISEDLFNNE 540
                                      DNGDGREEIAESLKEERKRKE+EAISEDLFNNE
Sbjct: 481 ---------------------------DNGDGREEIAESLKEERKRKEMEAISEDLFNNE 524

Query: 541 KGRRRGMVGSLQQLFTRS 550
           KGRRRGMVGSLQQL TRS
Sbjct: 541 KGRRRGMVGSLQQLLTRS 524

[Close]

BLAST of Spg038765 vs. ExPASy TrEMBL
Match: A0A6J1K8B4 (nijmegen breakage syndrome 1 protein isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493152 PE=4 SV=1)

HSP 1 Score: 902.9 bits (2332), Expect = 6.6e-259
Identity = 470/565 (83.19%), Postives = 492/565 (87.08%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFF--H 60
           MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIF   H
Sbjct: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSH 60

Query: 61  KSYLSNVSTKARISDCSKYGTFVSRNSGLKEKIHELPKKEASLYDGDVVSFGSGNATYRF 120
           KSYLSNVS+K RISDCSKYGTFVSR SGLKEKIHELPKKEASLYDGDV+SFGSGNATYRF
Sbjct: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120

Query: 121 SFVQLLFYVHHSESFKFQLLRDKVSSIGASTSDDIKECTHVLVEELMPFNEALVDAIVAE 180
           SFVQL+FYVHHS SF+FQLLRDKVSSIGASTS DI+ECTHVLVEELMPF+EALVDAIVAE
Sbjct: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180

Query: 181 KPFVLTSWVEVKMYIILFAGRTSYNEIPCFDSYHPTMTVEGMHVKVVDPNTRRNCLSGYT 240
           KPFV+TSWVE      LFAG+TS NEIPCFDSYHPTMTVEGMHVKVVDPNTR+NCLSGY 
Sbjct: 181 KPFVITSWVE------LFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYI 240

Query: 241 FLLGSAHMQYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENVRVVFVIPGGSAEK 300
           FLLGSAHM YKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGEN RVVF+IPGG AEK
Sbjct: 241 FLLGSAHM-YKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEK 300

Query: 301 LGSSYKVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETD 360
           LGSSYKVDSYYKI ELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETD
Sbjct: 301 LGSSYKVDSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETD 360

Query: 361 KPVVSNVQG--------------PHEYLSKPEVSIDNAATGSTGGHETFKNSYSGVEMRK 420
           KPV SNVQG              P +YLSKPEVSID+AA+GS G H+TF+NSYSGV+MR 
Sbjct: 361 KPVASNVQGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRN 420

Query: 421 DKVDESDNRNIDIIYSQNLIVQHATKPSSIVTAENSGITNFKRFRKRETDSGNSFYNLVP 480
           D+VDESDN NIDII++QNLIVQH  KPSSIVTAE+ GITNFKRFRK ET SGNSFYNLVP
Sbjct: 421 DQVDESDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVP 480

Query: 481 FDKYPYRQRLSFRAGGGVSASSFSGLEQGLLTSLDNGDGREEIAESLKEERKRKEIEAIS 540
           FDKYPY+                           DNGDGREEIAESLKEERKRKE+EAIS
Sbjct: 481 FDKYPYK---------------------------DNGDGREEIAESLKEERKRKEMEAIS 531

Query: 541 EDLFNNEKGRRRGMVGSLQQLFTRS 550
           EDLFNNEKGRRRGM GSLQQL TRS
Sbjct: 541 EDLFNNEKGRRRGMAGSLQQLLTRS 531

[Close]

BLAST of Spg038765 vs. ExPASy TrEMBL
Match: A0A6J1KAH4 (nijmegen breakage syndrome 1 protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493152 PE=4 SV=1)

HSP 1 Score: 897.9 bits (2319), Expect = 2.1e-257
Identity = 470/567 (82.89%), Postives = 492/567 (86.77%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFF--H 60
           MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIF   H
Sbjct: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSH 60

Query: 61  KSYLSNVSTKARISDCSKYGTFVSRNSGLKEKIHELPKKEASLYDGDVVSFGSGNATYRF 120
           KSYLSNVS+K RISDCSKYGTFVSR SGLKEKIHELPKKEASLYDGDV+SFGSGNATYRF
Sbjct: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120

Query: 121 SFVQLLFYVHHSESFKFQLLRDKVSSIGASTSDDIKECTHVLVEELMPFNEALVDAIVAE 180
           SFVQL+FYVHHS SF+FQLLRDKVSSIGASTS DI+ECTHVLVEELMPF+EALVDAIVAE
Sbjct: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180

Query: 181 KPFVLTSWVEVKMYIILFAGRTSYNEIPCFDSYHPTMTVEGMHVKVVDPNTRRNCLSGYT 240
           KPFV+TSWVE      LFAG+TS NEIPCFDSYHPTMTVEGMHVKVVDPNTR+NCLSGY 
Sbjct: 181 KPFVITSWVE------LFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYI 240

Query: 241 FLLGSAHMQYKYGDRLKMLLQQVGGANVLSIEDFSSDSQ--DFGNGENVRVVFVIPGGSA 300
           FLLGSAHM YKYGDRLKMLLQQVGGANVLSIEDFSSDSQ  DFGNGEN RVVF+IPGG A
Sbjct: 241 FLLGSAHM-YKYGDRLKMLLQQVGGANVLSIEDFSSDSQNEDFGNGENERVVFIIPGGLA 300

Query: 301 EKLGSSYKVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAE 360
           EKLGSSYKVDSYYKI ELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAE
Sbjct: 301 EKLGSSYKVDSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAE 360

Query: 361 TDKPVVSNVQG--------------PHEYLSKPEVSIDNAATGSTGGHETFKNSYSGVEM 420
           TDKPV SNVQG              P +YLSKPEVSID+AA+GS G H+TF+NSYSGV+M
Sbjct: 361 TDKPVASNVQGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKM 420

Query: 421 RKDKVDESDNRNIDIIYSQNLIVQHATKPSSIVTAENSGITNFKRFRKRETDSGNSFYNL 480
           R D+VDESDN NIDII++QNLIVQH  KPSSIVTAE+ GITNFKRFRK ET SGNSFYNL
Sbjct: 421 RNDQVDESDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNL 480

Query: 481 VPFDKYPYRQRLSFRAGGGVSASSFSGLEQGLLTSLDNGDGREEIAESLKEERKRKEIEA 540
           VPFDKYPY+                           DNGDGREEIAESLKEERKRKE+EA
Sbjct: 481 VPFDKYPYK---------------------------DNGDGREEIAESLKEERKRKEMEA 533

Query: 541 ISEDLFNNEKGRRRGMVGSLQQLFTRS 550
           ISEDLFNNEKGRRRGM GSLQQL TRS
Sbjct: 541 ISEDLFNNEKGRRRGMAGSLQQLLTRS 533

[Close]

BLAST of Spg038765 vs. ExPASy TrEMBL
Match: A0A6J1CQ04 (nijmegen breakage syndrome 1 protein OS=Momordica charantia OX=3673 GN=LOC111013240 PE=4 SV=1)

HSP 1 Score: 849.7 bits (2194), Expect = 6.6e-243
Identity = 442/553 (79.93%), Postives = 471/553 (85.17%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFF--H 60
           MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIF   H
Sbjct: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH 60

Query: 61  KSYLSNVSTKARISDCSKYGTFVSRNSGLKEKIHELPKKEASLYDGDVVSFGSGNATYRF 120
            SYLSNVS+K RISDCSKYGTFVSRNSGLKEKIHELPKKEASL DGDVVSFGSGNATYRF
Sbjct: 61  GSYLSNVSSKVRISDCSKYGTFVSRNSGLKEKIHELPKKEASLCDGDVVSFGSGNATYRF 120

Query: 121 SFVQLLFYVHHSESFKFQLLRDKVSSIGASTSDDIKECTHVLVEELMPFNEALVDAIVAE 180
           SFV LLFYVH SESF+ QLLRDKVSSIGASTS D  ECTHVLVEELM FNE L+DAI+AE
Sbjct: 121 SFVPLLFYVHCSESFQLQLLRDKVSSIGASTSHDSLECTHVLVEELMSFNEPLIDAIIAE 180

Query: 181 KPFVLTSWVEVKMYIILFAGRTSYNEIPCFDSYHPTMTVEGMHVKVVDPNTRRNCLSGYT 240
           KPFVL+SWVE      LFAGRTS NEIPC DSYHPTMTVEGMHVKVVDP TR+NCL GY 
Sbjct: 181 KPFVLSSWVE------LFAGRTSCNEIPCTDSYHPTMTVEGMHVKVVDPKTRKNCLIGYI 240

Query: 241 FLLGSAHMQYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENVRVVFVIPGGSAEK 300
           FLLGS HM+YKYGDRLKMLLQQVGGANV SIE FSSDS+D GNG+N R+VFV P GSAEK
Sbjct: 241 FLLGSTHMKYKYGDRLKMLLQQVGGANVSSIEGFSSDSKDLGNGDNDRIVFVTPQGSAEK 300

Query: 301 LGSSYKVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETD 360
           L S YKVDSYYKI ELVLISS+LSGKLDRDNLISPCEPGSSTCSTDETVVAESDLE ET 
Sbjct: 301 LDSFYKVDSYYKINELVLISSILSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEVETA 360

Query: 361 KPV--VSNVQGPHEYLSKPEVSIDNAATGSTGGHETFKNSYSGVEMRKDKVDESDNRNID 420
           KPV   SNVQ P EYLSKP+V ++NA TGS G HETF++ YS VE RKDKV+ESDNRN+D
Sbjct: 361 KPVDTASNVQRPDEYLSKPDVFVNNATTGSAGSHETFQDGYSSVETRKDKVNESDNRNLD 420

Query: 421 IIYSQNLIVQHATKPSSIVTAENSGITNFKRFRKRETDSGNSFYNLVPFDKYPYRQRLSF 480
           II++QNLIV+H T+PS+IVTAE+ G+TNFKRFRK ET SGNSFYNLVPF KYPY+     
Sbjct: 421 IIFNQNLIVRHVTEPSTIVTAEDGGVTNFKRFRKTETQSGNSFYNLVPFAKYPYK----- 480

Query: 481 RAGGGVSASSFSGLEQGLLTSLDNGDGREEIAESLKEERKRKEIEAISEDLFNNEKGRRR 540
                                 DNGDGREEIAESLKEERKRKE EAI+EDLF+NEKGRRR
Sbjct: 481 ----------------------DNGDGREEIAESLKEERKRKEKEAIAEDLFHNEKGRRR 520

Query: 541 GMVGSLQQLFTRS 550
           GMVGSLQ+LFTRS
Sbjct: 541 GMVGSLQELFTRS 520

[Close]

BLAST of Spg038765 vs. ExPASy TrEMBL
Match: A0A1S3C4N6 (nijmegen breakage syndrome 1 protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496815 PE=4 SV=1)

HSP 1 Score: 849.0 bits (2192), Expect = 1.1e-242
Identity = 445/558 (79.75%), Postives = 473/558 (84.77%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFF--H 60
           MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTI KDKGVSRIHAEI+VDAMI    H
Sbjct: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTIAKDKGVSRIHAEILVDAMIPLNSH 60

Query: 61  KSYLSNVSTKARISDCSKYGTFVSRNSGLKEKIHELPKKEASLYDGDVVSFGSGNATYRF 120
            S+LSN+ +K RISDCSKYGTFV RNSGLKEK+HEL KKEASL DGDVVSFGSGNATYRF
Sbjct: 61  NSHLSNICSKVRISDCSKYGTFVRRNSGLKEKLHELSKKEASLCDGDVVSFGSGNATYRF 120

Query: 121 SFVQLLFYVHHSESFKFQLLRDKVSSIGASTSDDIKECTHVLVEELMPFNEALVDAIVAE 180
           SFVQLLFYV+ SESF+ QLLRDKVSSIGA TS DI+ECTHVLVEELMPFNEALVDAIVAE
Sbjct: 121 SFVQLLFYVNRSESFQSQLLRDKVSSIGACTSHDIQECTHVLVEELMPFNEALVDAIVAE 180

Query: 181 KPFVLTSWVEVKMYIILFAGRTSYNEIPCFDSYHPTMTVEGMHVKVVDPNTRRNCLSGYT 240
           KPFVLTSWVE      LFAG+T+ NEIP FDSY PTMTVEGMHVKVVDP+TR+NCLSGYT
Sbjct: 181 KPFVLTSWVE------LFAGKTTCNEIPSFDSYQPTMTVEGMHVKVVDPSTRKNCLSGYT 240

Query: 241 FLLGSAHMQYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENVRVVFVIPGGSAEK 300
           FLLG   MQYKYGDRLKMLLQQVGGANVLSIEDFSSDSQD GNGEN RVVFV+PGGS EK
Sbjct: 241 FLLGLTQMQYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEK 300

Query: 301 LGSSYKVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETD 360
             SS KVDSYYKITEL+LISSVLSG LDRDNLI PCEPGSSTCSTDETVVAESDLE ET 
Sbjct: 301 WDSSSKVDSYYKITELILISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETS 360

Query: 361 KPVVSNVQGPHEYLSKPE-------VSIDNAATGSTGGHETFKNSYSGVEMRKDKVDESD 420
           KPVVSNVQGP EYLSK +       VS+DNA TGS GGHE  KNS S +EMRKDK++ESD
Sbjct: 361 KPVVSNVQGPDEYLSKSDEYLSRSLVSVDNATTGSLGGHEIVKNSSSDIEMRKDKINESD 420

Query: 421 NRNIDIIYSQNLIVQHATKPSSIVTAENSGITNFKRFRKRETDSGNSFYNLVPFDKYPYR 480
           NRNIDII+SQNLIVQHATK S++VTAENSGITNFKRFRK +T SGNSF NLVPFDKYPY+
Sbjct: 421 NRNIDIIFSQNLIVQHATKASTLVTAENSGITNFKRFRKTQTHSGNSFSNLVPFDKYPYK 480

Query: 481 QRLSFRAGGGVSASSFSGLEQGLLTSLDNGDGREEIAESLKEERKRKEIEAISEDLFNNE 540
                                      DNGDGREEIAESLKEER+RKE EAI+EDLF+NE
Sbjct: 481 ---------------------------DNGDGREEIAESLKEERRRKETEAIAEDLFHNE 525

Query: 541 KGRRRGMVGSLQQLFTRS 550
           KGRRRGM GSLQ+LFTRS
Sbjct: 541 KGRRRGMAGSLQELFTRS 525

[Close]

BLAST of Spg038765 vs. TAIR 10
Match: AT3G02680.1 (nijmegen breakage syndrome 1 )

HSP 1 Score: 383.6 bits (984), Expect = 2.6e-106
Identity = 237/579 (40.93%), Postives = 330/579 (56.99%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFF--- 60
           MVWG FPVDPLSGE+K+YIF+ G YKVGRKGCD+ I KDKGVSRIHAE+  DA       
Sbjct: 1   MVWGLFPVDPLSGEDKYYIFSKGIYKVGRKGCDIIINKDKGVSRIHAELTFDATTVSTSR 60

Query: 61  -HKSYLSNVSTKARISDCSKYGTFVSRNSGLKEKIHELPKKEASLYDGDVVSFGSGNATY 120
            +KS     S   R+ DCSKYGTFV  + G K+K+HEL  KE  L DGDV++FG+G+A Y
Sbjct: 61  RNKSSSDTSSFVIRVKDCSKYGTFVKTDLGTKDKVHELSNKEKILQDGDVIAFGTGSAIY 120

Query: 121 RFSFVQLLFYV-HHSESFKF-QLLRDKVSSIGASTSDDI-KECTHVLVEELMPFNEALVD 180
           R S + L+FY+   SE+FK  Q ++D VSSIGA  S  + +ECTHVL+E  M  NEAL++
Sbjct: 121 RLSLIPLVFYLCPSSETFKVDQPVQDAVSSIGARISPTLSEECTHVLLEPRMQVNEALIN 180

Query: 181 AIVAEKPFVLTSWVEVKMYIILFAGRTSYNEIPCFDSYHPTMTVEGMHVKVVDPNTRRNC 240
           AI+A+K  +LT+WV      +L A ++  +EIP +  Y P++ VE   V V++ N R  C
Sbjct: 181 AILAKKTIILTNWV------MLLAEKSICSEIPGYSQYRPSVMVEEALVDVLELNVREKC 240

Query: 241 LSGYTFLLGSAHMQYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENVRVVFVIPG 300
           L G+TF+L      Y++G     LL +V GA  ++IED SS SQD   GE  R++ VIP 
Sbjct: 241 LEGFTFVLEPTD-TYRFGCSFPSLL-EVCGAETVTIEDISSMSQDSQFGEINRMICVIPK 300

Query: 301 GSAEKLGSSYKVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDL 360
            + +K G    +    ++ E+ L+ +V SG L   +LI P    SS+CSTDETVVA+S+ 
Sbjct: 301 SAGDKFGRFKHLSLLSRVNEMDLVCAVFSGNLPSTSLIPPSVVISSSCSTDETVVADSEA 360

Query: 361 EAETDKPVVSNVQGPH--EYLSKPEV---------------------SIDNAATGSTGGH 420
           E E     V  +      E   KP                       S++  A   + GH
Sbjct: 361 EEEETTSSVHMIDATEKAETPEKPAAIVIEDSPVTILEETSNLNEFKSVNLLADTESRGH 420

Query: 421 ETFKNSYSGVEMRKDKVDESDNRNIDIIYSQNLIVQHATKPSSIVTAENSGITNFKRFRK 480
              KNS   V +R+D+ DE++    +IIY+Q+LIV+       + +    G+ +FKRFRK
Sbjct: 421 MDEKNSSDSVTIRRDRNDEAETGKSEIIYTQDLIVRDLRSTRKVQSTGGEGVVDFKRFRK 480

Query: 481 RETDSGNSFYNLVPFDKYPYRQRLSFRAGGGVSASSFSGLEQGLLTSLDNGDGREEIAES 540
                GNSF +L+PF K PY++  S+                             ++ + 
Sbjct: 481 GNVTCGNSFSSLIPFAKDPYKEYDSW-----------------------------DVTDF 540

Query: 541 LKEERKRKEIEAISEDLFNNEKGRRRGMVGSLQQLFTRS 550
           +KEE+KRK++EAI+EDLF  EK R+RG  GS++   + S
Sbjct: 541 MKEEKKRKQMEAIAEDLFKTEKARKRGTAGSIRGFLSGS 542

The following BLAST results are available for this feature:

BLAST of Spg038765 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607018.1	1.0e-261	85.13	Nijmegen breakage syndrome 1 protein, partial [Cucurbita argyrosperma subsp. sor...	[more]
XP_022949548.1	1.7e-261	85.13	nijmegen breakage syndrome 1 protein [Cucurbita moschata]	[more]
XP_023521477.1	2.5e-260	83.72	nijmegen breakage syndrome 1 protein [Cucurbita pepo subsp. pepo]	[more]
XP_022998557.1	1.4e-258	83.19	nijmegen breakage syndrome 1 protein isoform X2 [Cucurbita maxima]	[more]
XP_022998556.1	4.4e-257	82.89	nijmegen breakage syndrome 1 protein isoform X1 [Cucurbita maxima]	[more]

BLAST of Spg038765 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0H8D7	3.6e-105	40.93	Nijmegen breakage syndrome 1 protein OS=Arabidopsis thaliana OX=3702 GN=NBS1 PE=...	[more]
Q7XD82	5.3e-80	34.52	Nijmegen breakage syndrome 1 protein OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
B8BHK8	1.4e-77	33.50	Nijmegen breakage syndrome 1 protein OS=Oryza sativa subsp. indica OX=39946 GN=N...	[more]
Q5I2W8	5.0e-06	22.89	Nibrin OS=Danio rerio OX=7955 GN=nbn PE=2 SV=2	[more]

BLAST of Spg038765 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GCD8	8.3e-262	85.13	nijmegen breakage syndrome 1 protein OS=Cucurbita moschata OX=3662 GN=LOC1114528...	[more]
A0A6J1K8B4	6.6e-259	83.19	nijmegen breakage syndrome 1 protein isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1KAH4	2.1e-257	82.89	nijmegen breakage syndrome 1 protein isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1CQ04	6.6e-243	79.93	nijmegen breakage syndrome 1 protein OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A1S3C4N6	1.1e-242	79.75	nijmegen breakage syndrome 1 protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Spg038765 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02680.1	2.6e-106	40.93	nijmegen breakage syndrome 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000253	Forkhead-associated (FHA) domain	PFAM	PF00498	FHA	coord: 25..110 e-value: 3.4E-10 score: 40.1
IPR000253	Forkhead-associated (FHA) domain	PROSITE	PS50006	FHA_DOMAIN	coord: 25..82 score: 9.3558
IPR000253	Forkhead-associated (FHA) domain	CDD	cd00060	FHA	coord: 2..119 e-value: 3.45636E-10 score: 55.085
None	No IPR available	GENE3D	2.60.200.20		coord: 3..126 e-value: 3.4E-14 score: 54.7
IPR040227	Nibrin-related	PANTHER	PTHR12162	NIBRIN-RELATED	coord: 2..364 coord: 398..532
IPR008984	SMAD/FHA domain superfamily	SUPERFAMILY	49879	SMAD/FHA domain	coord: 13..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg038765.1	Spg038765.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006302	double-strand break repair
biological_process	GO:0007095	mitotic G2 DNA damage checkpoint signaling
cellular_component	GO:0030870	Mre11 complex
molecular_function	GO:0005515	protein binding