Spg038755 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTTGTGCAGGCCACCAGAAAATGAACAAAGAATGGTCAATTAAAGCCCTCGAAGCTCTAGCCATTGTCGAAGGATTAAAAGCATACCTGTTGCTGAAGGAGAAAGATGATTTCCGACATCTAATTCCCCCAATTTGGGTCGAATCCGACGCCGCCGAAGTGATTAAATTCCTCAATCTAGAGAGCGAAGACCTTTCGGAAACCAAACACATTCTGGAAGAAGCGGCTGATCTCGGTCGCAAGGCAGGGACATTGGCGTTCTCGTTCTGTCCAAGAGAATGCAATCGCGTGGCTCACACCCTTGCTCGAGCTGCAAGTTCGTCCCCAACATCTAGCATAGTTTACTCTAGCTTTCGTTTCTCTTTGATCGCCAATTTTGAGCAATCCCCATATTCTTCTCTCGAAGATGTCGTTTTTTGGAGGGATTCTATTGTTCCCACTTGGCTTTCCTTTGCTATTAATGAGGATTTTTGTATACCTAACTTGGGTTCTCTTTATTATTGA ATGATTTGTGCAGGCCACCAGAAAATGAACAAAGAATGGTCAATTAAAGCCCTCGAAGCTCTAGCCATTGTCGAAGGATTAAAAGCATACCTGTTGCTGAAGGAGAAAGATGATTTCCGACATCTAATTCCCCCAATTTGGGTCGAATCCGACGCCGCCGAAGTGATTAAATTCCTCAATCTAGAGAGCGAAGACCTTTCGGAAACCAAACACATTCTGGAAGAAGCGGCTGATCTCGGTCGCAAGGCAGGGACATTGGCGTTCTCGTTCTGTCCAAGAGAATGCAATCGCGTGGCTCACACCCTTGCTCGAGCTGCAAGTTCGTCCCCAACATCTAGCATAGTTTACTCTAGCTTTCGTTTCTCTTTGATCGCCAATTTTGAGCAATCCCCATATTCTTCTCTCGAAGATGTCGTTTTTTGGAGGGATTCTATTGTTCCCACTTGGCTTTCCTTTGCTATTAATGAGGATTTTTGTATACCTAACTTGGGTTCTCTTTATTATTGA ATGATTTGTGCAGGCCACCAGAAAATGAACAAAGAATGGTCAATTAAAGCCCTCGAAGCTCTAGCCATTGTCGAAGGATTAAAAGCATACCTGTTGCTGAAGGAGAAAGATGATTTCCGACATCTAATTCCCCCAATTTGGGTCGAATCCGACGCCGCCGAAGTGATTAAATTCCTCAATCTAGAGAGCGAAGACCTTTCGGAAACCAAACACATTCTGGAAGAAGCGGCTGATCTCGGTCGCAAGGCAGGGACATTGGCGTTCTCGTTCTGTCCAAGAGAATGCAATCGCGTGGCTCACACCCTTGCTCGAGCTGCAAGTTCGTCCCCAACATCTAGCATAGTTTACTCTAGCTTTCGTTTCTCTTTGATCGCCAATTTTGAGCAATCCCCATATTCTTCTCTCGAAGATGTCGTTTTTTGGAGGGATTCTATTGTTCCCACTTGGCTTTCCTTTGCTATTAATGAGGATTTTTGTATACCTAACTTGGGTTCTCTTTATTATTGA MICAGHQKMNKEWSIKALEALAIVEGLKAYLLLKEKDDFRHLIPPIWVESDAAEVIKFLNLESEDLSETKHILEEAADLGRKAGTLAFSFCPRECNRVAHTLARAASSSPTSSIVYSSFRFSLIANFEQSPYSSLEDVVFWRDSIVPTWLSFAINEDFCIPNLGSLYY Homology
BLAST of Spg038755 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia]) HSP 1 Score: 59.3 bits (142), Expect = 3.7e-05 Identity = 42/119 (35.29%), Postives = 66/119 (55.46%), Query Frame = 0
BLAST of Spg038755 vs. NCBI nr
Match: KAE8776165.1 (hypothetical protein D1007_51201 [Hordeum vulgare]) HSP 1 Score: 55.5 bits (132), Expect = 5.3e-04 Identity = 37/97 (38.14%), Postives = 50/97 (51.55%), Query Frame = 0
BLAST of Spg038755 vs. NCBI nr
Match: KAF7821986.1 (putative ribonuclease H-like domain, reverse transcriptase zinc-binding domain-containing protein [Senna tora]) HSP 1 Score: 55.1 bits (131), Expect = 6.9e-04 Identity = 36/112 (32.14%), Postives = 61/112 (54.46%), Query Frame = 0
BLAST of Spg038755 vs. NCBI nr
Match: KAG6599977.1 (hypothetical protein SDJN03_05210, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 54.7 bits (130), Expect = 9.0e-04 Identity = 31/91 (34.07%), Postives = 52/91 (57.14%), Query Frame = 0
BLAST of Spg038755 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 1.8e-05 Identity = 42/119 (35.29%), Postives = 66/119 (55.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|