Spg038689 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg038689
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ubiquitin receptor RAD23
Location	scaffold12: 6084900 .. 6089100 (-)
RNA-Seq Expression	Spg038689
Synteny	Spg038689

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCATGAGTTCGAATTTATTTTCAGATTTTTAGTGTGAAATAACAAAAGGCAGTGCCCAAACTCGCCGGTCGCGATCTTCTTCACTACCAAATCTAGGGTTCTCTTCGATCTCTGCTGCGTTTCAGGTTCCTTCATCCTGAAACGCTGTCGTTTTTGTCACTCTCCGTCTTCCCCTCCTGCTAATTCGTCGCAATGAAGCTCACTGTGAAGACCCTCAAAGGAAGCCACTTCGAAATTAGGGTTCAGCCCACCGACACCGTGAGTTCTAACGTTGCTTGTTTTTATTTTTATTTTTATTTTTTTTAACCTCATCGATTGCTTCGTGCGACTATTTGGGTTTATAGTTAATTTATTAATGTAGCTGAGGACGCAAGCATTGACCCAACTGGCAATCTTGAGCTTTGTTTAATTTTTTTTTCTTTTGAAGAAATTATGATTATAGAATTGGAATAGTGTGAAACTACTAGAGGAATTGTTTGGAATTGAGGAGAAGATTTTAGAATTAGGGTTTCTCGTGTTACTTAATCTGGAAGCTGCTTTTCTTTCTCAACGAAGATCACAAAAGTTTTGTTTATTTGATTTTTTCGTGATCTGCTGGATTTGCATGGTTGGAACAGAAGCTGGAGAAGTCTTAGATATCATGCAGTGCACTGTTATTGTTTGGGATGCCGTTTTAGTAGTGGATTTTAACAGCCAAATTTAATATTGTTTTTTATTGTGGGACTTTGAATTGAGAGTGTTCGAGAAATGATTTTAAATCTTGTGATTTTGAAATTTTTACTTTGTTCAGAACGAAACTTTTTTGAAATGAACGTAAATAAAATTGTGTTTGGATGATAGAACAGAAAGAACAAAAAAAAGAAGTTTACTAACATAGGCTTTTAATCTTAATGTGTTAATGGAAAAATAAAATATGACAAGGTGAGTAGTTTACCTCCAACTTCGAGGAAATGGATTTTTTTTTTTTACCTTAAAAGCAGCAAATTGAATCTTTCATGTGATAACAAACAACATAATTCATTTTAAATCAGTTATAATAATTTGTGATCCCTCGAAACTTGAGCAACCAAACGGAGCAGGGTTTTTATTTGTTTTATTTTTTTCAAATCATTTCTAATTGTAGAATTTTTGGTGAAGGTGATGGCTGTCAAGAAAAATATTGAAGATGTACAAGGAAAGGATAATTATCCTTGTGGTCAGCAATTACTGATACACAATGGGAAAGTTTTGAAAGATGAAAGTACTCTGGCAGAAAACAAAGTATCTGAAGAGGGTTTTCTTGTTGTCATGCTCAGCAAGGTATTTTGGTCCTATAATTTTCTTGAAGCACTAATGAAATGCTTTTATTTTGGATTTTAATGAAGGATTGAAATATGAAAAATGGTTGTGCTCAATCTTATGTATTTGCTTATACTGCAGAGCAAAACATCAGGCTCAGCAGGGCAGTCATCAGCTCAGGTAATATTGCCCATTTCTGTTGCCAGTTTGTTATTCTCTAATGTTAACCACCTATGGAACCTATTTGTTGCAGCCTGCTCAAAACCCCCCTGTAGCTCAACCAATTTTGAATTCGACTCCTGCTACCCAAGTTACACCATCACCGGCTCCTGCACCTCAAGCTCCCACACAAGCTCCATCATCGTAAGTTTTTCAAGAATGATCTTCTTGTTGCATTTTCCCTTGATCGGTTGAATAATTATTACCCACATGTGTTTTTGTTCTTGTTTTCCAGTGCCCCTAAGAACACTACATCTACTTCAGACAGGGCCACAGATAAGTATGCCTTCTATTTCCTTTTGACAATTTTTTATTATTATTATTTTATTTATATATTTATTTATTTATTTTTATAATTTCAAAAGGCAAGAATTACCTTCTATTTCGTAATACTGTTAATTGCTACAGACTGAATAAGTTATATAACAGTTCTTGATTATTAACTATTGGGACCAATGGCTGATATAAAAAAGCTGTTGTGCAACATGTTTCCTCCTCTTTTGCTTTATTTACAAACAAAACTTCTTGCCTACTGGTGAGAAATTTTCTCATCTTTTCTTTTGGGGGGATCGTTTGCAGTGTGCAAACAGATACATATGGTCAAGCTGCTTCAAATTTGGTCGCTGGTAATAATCTGGAACAGACCATTCAACAAATAATGGATATGGGAGGTGGCAACTGGGACAGAGAAACAGTTGTTCGCGCACTAAGAGCTGCTTATAACAATCCAGAGCGAGCAGTGGATTACTTGTACTCTGTATGTCTAAGTCTTACTTTGAAACTTGGTCTGGATATTTTCAGTTACTAATAGTGTTTTTATGTTTAGGGTATTCCGGAATCTGCAGAAGTTGCAGTACCAGTGGGTCGTTTTGGTTCTGGCCAAGCCACTGAAACTGATGCATCTCTTCCAGCACCTGTCTCTGGAGCACCCAACACAGCCCCCTTGAATATGTTTCCTCAGGTAAGTTTGGATGCATGAACAACACGTTTGTTTGTTTGCTCAAATTCACTTATTTTTATTGGGTGGCAACTGTGCAGGAGGCACTCTCTGCTGGCAGTGGTGGCGGTGTTAACCTCGGATCTCTTGAATTCCTTAGAAACAATCCACAGGTAACTAGTGAAACATCATTTCTGGGGTTTTCCTGATTGATAAGCTCATTAGCTTTCTTCACGGAATATCTAATTGCATGGTGTTTAAAAATCCGTTGTTTTGACTTTGAAGTTGTTTTTTTTGCCTATTTGGCCAATTGTGGTGTTAGTTTGCATCTTGTTGTGCATTGATTCACATAAAATATATCCGTTAGAAATTCACAAACGTTCGATGTAAAAATTATATTAAAATTCTCAAACATTTGATATAAAAATTCTACATGTGGATTGTATCAGCCCAGTCATATCATTGTATTAGATGTATATAAATTGTACGAAGGCTTTCCAAAATCTTAGTTTGCTTTATTTTTTATTGACTATGGATTTGAATAAAACTAATTTGAAATAGTTACTGAATGAGGTTTGTTATCACTGTTTACATTCTAGTTCCAGGCCTTGCGGACAATGGTGCATACAAACCCTCAAATCTTACAGGTCTACCCATCCTTCTGCTTTGCAATTTACTTAGTTGTTATAGTCATGGTTTGCCCAAGAGTAAAATCTTTTGCTTCTGATGGCAGCCCATGCTTCAAGAACTTGGAAAGCAGAATCCCCAGCTTTTGAGACTCATTCAGGATCATCATGCAGAGTTCCTTCAGTTAATTAACGAACCTGTCGACAATTTCGACGGGTGAGTCTTTCACTGCTGTCATATGGTTAATTTTAAATATTGTTTATTTGAAACCTCCTAGTTCTGAAGTTCTTTAGTTGTGATTGATCATGCGCATATAAGATGATCATTGCCTAGATAATCCTTCTCTTATTTTTCTCCCATCGCCAAATGCACAGTGCCTCTGTAGTAGGTTCCCTGCGTGGGATAATCATAGATAATCAGGTGAGGTGTATTAATCAAAGGAGAATTGTTCTGCATTTCTCTTATTACTGTTTATCCTTATGGTCAAACTACAGCATCCATCCCCAGCAACTCGGTGTTGCACCACTAGCACAGAATTTATTAACACCACAAGCAAAAAATTTAAGCATGTTGCACGTAAAAATTGTCGTTTGTACCTAACCTGGATGGTTTGTTTGTTTTTTCCTTATGTAATTTAATTTTCGTGCTTAAAAAACCAAATAGATTGAGATACGGTTTTATCTGGTTGATAATTGTCATCTGTAGAACAGAAACTGTTTCTGGGTCTGGTATAGTCAGAGATGTCGTTCACTTGATTGATTATTAATTTTTAATAGGCTGAACCTCTTTTGTTGTGACATCGCTGCATCTATCTGTAGAACCATAAAACTTTTTTCTTTCTTTCAGAGACATGTTTGAACAGGCTGAGGCGGTGGACATGCCTGATGCCATAAATGTCACTCCAGCCGAACAGGCAGCCATTGAACGAGTATGAACTCTTTATTCCCTGAGGTGCCTCCTTATTCTCCTCCTCCAAACTCGATCTGTATGCGTAACTTTTTGCTGCTTGTTCCCTTGTGTAGCTTGAGGCAATGGGATTTGATCGAGCCTTAGTCATCGAGGCATTTTTGGCATGCGATCGCAACGAAGAACTAGCAGCTAACTACTTACTGGAGAATTCTGGAGATTTTGATGATTAA

mRNA sequence

ATGAAGCTCACTGTGAAGACCCTCAAAGGAAGCCACTTCGAAATTAGGGTTCAGCCCACCGACACCGTGATGGCTGTCAAGAAAAATATTGAAGATGTACAAGGAAAGGATAATTATCCTTGTGGTCAGCAATTACTGATACACAATGGGAAAGTTTTGAAAGATGAAAGTACTCTGGCAGAAAACAAAGTATCTGAAGAGGGTTTTCTTGTTGTCATGCTCAGCAAGAGCAAAACATCAGGCTCAGCAGGGCAGTCATCAGCTCAGCCTGCTCAAAACCCCCCTGTAGCTCAACCAATTTTGAATTCGACTCCTGCTACCCAAGTTACACCATCACCGGCTCCTGCACCTCAAGCTCCCACACAAGCTCCATCATCTGCCCCTAAGAACACTACATCTACTTCAGACAGGGCCACAGATAAAAATTTTCTCATCTTTTCTTTTGGGGGGATCGTTTGCAGTGTGCAAACAGATACATATGGTCAAGCTGCTTCAAATTTGGTCGCTGGTAATAATCTGGAACAGACCATTCAACAAATAATGGATATGGGAGGTGGCAACTGGGACAGAGAAACAGTTGTTCGCGCACTAAGAGCTGCTTATAACAATCCAGAGCGAGCAGTGGATTACTTGTACTCTGGTATTCCGGAATCTGCAGAAGTTGCAGTACCAGTGGGTCGTTTTGGTTCTGGCCAAGCCACTGAAACTGATGCATCTCTTCCAGCACCTGTCTCTGGAGCACCCAACACAGCCCCCTTGAATATGTTTCCTCAGGAGGCACTCTCTGCTGGCAGTGGTGGCGGTGTTAACCTCGGATCTCTTGAATTCCTTAGAAACAATCCACAGTTCCAGGCCTTGCGGACAATGGTGCATACAAACCCTCAAATCTTACAGCCCATGCTTCAAGAACTTGGAAAGCAGAATCCCCAGCTTTTGAGACTCATTCAGGATCATCATGCAGAGTTCCTTCAGTTAATTAACGAACCTGTCGACAATTTCGACGGAACAGAAACTGTTTCTGGGTCTGGTATAGTCAGAGATGCTGAGGCGGTGGACATGCCTGATGCCATAAATGTCACTCCAGCCGAACAGGCAGCCATTGAACGACTTGAGGCAATGGGATTTGATCGAGCCTTAGTCATCGAGGCATTTTTGGCATGCGATCGCAACGAAGAACTAGCAGCTAACTACTTACTGGAGAATTCTGGAGATTTTGATGATTAA

Coding sequence (CDS)

ATGAAGCTCACTGTGAAGACCCTCAAAGGAAGCCACTTCGAAATTAGGGTTCAGCCCACCGACACCGTGATGGCTGTCAAGAAAAATATTGAAGATGTACAAGGAAAGGATAATTATCCTTGTGGTCAGCAATTACTGATACACAATGGGAAAGTTTTGAAAGATGAAAGTACTCTGGCAGAAAACAAAGTATCTGAAGAGGGTTTTCTTGTTGTCATGCTCAGCAAGAGCAAAACATCAGGCTCAGCAGGGCAGTCATCAGCTCAGCCTGCTCAAAACCCCCCTGTAGCTCAACCAATTTTGAATTCGACTCCTGCTACCCAAGTTACACCATCACCGGCTCCTGCACCTCAAGCTCCCACACAAGCTCCATCATCTGCCCCTAAGAACACTACATCTACTTCAGACAGGGCCACAGATAAAAATTTTCTCATCTTTTCTTTTGGGGGGATCGTTTGCAGTGTGCAAACAGATACATATGGTCAAGCTGCTTCAAATTTGGTCGCTGGTAATAATCTGGAACAGACCATTCAACAAATAATGGATATGGGAGGTGGCAACTGGGACAGAGAAACAGTTGTTCGCGCACTAAGAGCTGCTTATAACAATCCAGAGCGAGCAGTGGATTACTTGTACTCTGGTATTCCGGAATCTGCAGAAGTTGCAGTACCAGTGGGTCGTTTTGGTTCTGGCCAAGCCACTGAAACTGATGCATCTCTTCCAGCACCTGTCTCTGGAGCACCCAACACAGCCCCCTTGAATATGTTTCCTCAGGAGGCACTCTCTGCTGGCAGTGGTGGCGGTGTTAACCTCGGATCTCTTGAATTCCTTAGAAACAATCCACAGTTCCAGGCCTTGCGGACAATGGTGCATACAAACCCTCAAATCTTACAGCCCATGCTTCAAGAACTTGGAAAGCAGAATCCCCAGCTTTTGAGACTCATTCAGGATCATCATGCAGAGTTCCTTCAGTTAATTAACGAACCTGTCGACAATTTCGACGGAACAGAAACTGTTTCTGGGTCTGGTATAGTCAGAGATGCTGAGGCGGTGGACATGCCTGATGCCATAAATGTCACTCCAGCCGAACAGGCAGCCATTGAACGACTTGAGGCAATGGGATTTGATCGAGCCTTAGTCATCGAGGCATTTTTGGCATGCGATCGCAACGAAGAACTAGCAGCTAACTACTTACTGGAGAATTCTGGAGATTTTGATGATTAA

Protein sequence

MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKSKTSGSAGQSSAQPAQNPPVAQPILNSTPATQVTPSPAPAPQAPTQAPSSAPKNTTSTSDRATDKNFLIFSFGGIVCSVQTDTYGQAASNLVAGNNLEQTIQQIMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASLPAPVSGAPNTAPLNMFPQEALSAGSGGGVNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFDGTETVSGSGIVRDAEAVDMPDAINVTPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD

Homology

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BLAST of Spg038689 vs. NCBI nr
Match: XP_038906275.1 (ubiquitin receptor RAD23b-like [Benincasa hispida])

HSP 1 Score: 682.2 bits (1759), Expect = 2.8e-192
Identity = 366/408 (89.71%), Postives = 371/408 (90.93%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSAQPAQNPPVAQPILNSTPATQVTPSPAPAPQAP 120
           ENKVSEEGFLVVMLSKSK SGSAGQSS QPAQNPPVAQPILNST ATQVTPSP PAPQAP
Sbjct: 61  ENKVSEEGFLVVMLSKSKASGSAGQSSTQPAQNPPVAQPILNSTSATQVTPSPTPAPQAP 120

Query: 121 TQAPSSAPKNTTSTSDRATDKNFLIFSFGGIVCSVQTDTYGQAASNLVAGNNLEQTIQQI 180
           TQAPSSAPKNTTSTSDRATD             +VQTDTYGQAASNLVAGNNLEQTIQQ+
Sbjct: 121 TQAPSSAPKNTTSTSDRATD-------------NVQTDTYGQAASNLVAGNNLEQTIQQL 180

Query: 181 MDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASL 240
           MDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETD SL
Sbjct: 181 MDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDTSL 240

Query: 241 PAPVSGAPNTAPLNMFPQEALSAGSGGGV-NLGSLEFLRNNPQFQALRTMVHTNPQILQP 300
           PAPVSGAPNTAPLNMFPQEALSAG G G  NLGSLEFLRNNPQFQALRTMVHTNPQILQP
Sbjct: 241 PAPVSGAPNTAPLNMFPQEALSAGGGSGSGNLGSLEFLRNNPQFQALRTMVHTNPQILQP 300

Query: 301 MLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFDGTETVSGSGIVRDAEAVDMPDAINV 360
           MLQELGKQNPQLLRLIQDHH EFLQLINEP+DNF+G        +   AE  DMP AINV
Sbjct: 301 MLQELGKQNPQLLRLIQDHHTEFLQLINEPIDNFEGE-------MFEQAEP-DMPHAINV 360

Query: 361 TPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 408
           TPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 TPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 387

[Close]

BLAST of Spg038689 vs. NCBI nr
Match: XP_008462953.1 (PREDICTED: ubiquitin receptor RAD23b isoform X1 [Cucumis melo])

HSP 1 Score: 672.9 bits (1735), Expect = 1.7e-189
Identity = 362/408 (88.73%), Postives = 370/408 (90.69%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRVQ TDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSAQPAQNPPVAQPILNSTPATQVTPSPAPAPQAP 120
           ENKVSEEGFLVVMLSKSKTS SAGQSS QPAQNPPVAQP+L+STPA QVTPSP PAPQAP
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSASAGQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPAPQAP 120

Query: 121 TQAPSSAPKNTTSTSDRATDKNFLIFSFGGIVCSVQTDTYGQAASNLVAGNNLEQTIQQI 180
           TQAPSSA KNTTSTSDR TD             +VQTDTYGQAASNLVAGNNLEQT+QQ+
Sbjct: 121 TQAPSSALKNTTSTSDRVTD-------------NVQTDTYGQAASNLVAGNNLEQTVQQL 180

Query: 181 MDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASL 240
           MDMGGG WDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDAS+
Sbjct: 181 MDMGGGTWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASV 240

Query: 241 PAPVSGAPNTAPLNMFPQEALSA-GSGGGVNLGSLEFLRNNPQFQALRTMVHTNPQILQP 300
           PAPVSGAPNTAPLNMFPQEALSA G GGG NLGSLEFLRNNPQFQALRTMVHTNPQILQP
Sbjct: 241 PAPVSGAPNTAPLNMFPQEALSAGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQP 300

Query: 301 MLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFDGTETVSGSGIVRDAEAVDMPDAINV 360
           MLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNF+G        +   AE  DMP AINV
Sbjct: 301 MLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGE-------MFEQAEP-DMPHAINV 360

Query: 361 TPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 408
           TPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 TPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 387

[Close]

BLAST of Spg038689 vs. NCBI nr
Match: XP_022153480.1 (ubiquitin receptor RAD23b-like [Momordica charantia])

HSP 1 Score: 666.0 bits (1717), Expect = 2.1e-187
Identity = 357/408 (87.50%), Postives = 366/408 (89.71%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIED+QGKDNYPCGQQLLIHNGKVLKDESTLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSAQPAQNPPVAQPILNSTPATQVTPSPAPAPQAP 120
           ENKVSEEGFLVVMLSKSKTSGS GQSS QPAQ+PPVAQP+LNSTP TQVTPSP PA QAP
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSGSVGQSSTQPAQSPPVAQPVLNSTPTTQVTPSPTPALQAP 120

Query: 121 TQAPSSAPKNTTSTSDRATDKNFLIFSFGGIVCSVQTDTYGQAASNLVAGNNLEQTIQQI 180
           TQAPSSAP+NTTSTSDR  D             +VQTDTYGQAASNLVAGNNLEQTIQQI
Sbjct: 121 TQAPSSAPRNTTSTSDRVAD-------------NVQTDTYGQAASNLVAGNNLEQTIQQI 180

Query: 181 MDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASL 240
           MDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPE+AEVAVPV RFGSGQATETDASL
Sbjct: 181 MDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPETAEVAVPVARFGSGQATETDASL 240

Query: 241 PAPVSGAPNTAPLNMFPQEALS-AGSGGGVNLGSLEFLRNNPQFQALRTMVHTNPQILQP 300
            AP SGAPNTAPLNMFPQEALS  G GGG NLGSLEFLRNNPQFQALRTMVHTNPQILQP
Sbjct: 241 AAPASGAPNTAPLNMFPQEALSGGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQP 300

Query: 301 MLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFDGTETVSGSGIVRDAEAVDMPDAINV 360
           MLQELGKQNPQLLRLIQDHHAEFLQLINEP+DNF+G        +   AE  DMP AINV
Sbjct: 301 MLQELGKQNPQLLRLIQDHHAEFLQLINEPLDNFEG-------DMFEQAEQ-DMPHAINV 360

Query: 361 TPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 408
           TPAEQAAIERLEAMGFDRA VIEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 TPAEQAAIERLEAMGFDRASVIEAFLACDRNEELAANYLLENSGDFDD 387

[Close]

BLAST of Spg038689 vs. NCBI nr
Match: XP_011651807.2 (ubiquitin receptor RAD23b [Cucumis sativus] >KAE8650953.1 hypothetical protein Csa_002067 [Cucumis sativus])

HSP 1 Score: 665.2 bits (1715), Expect = 3.5e-187
Identity = 363/422 (86.02%), Postives = 372/422 (88.15%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRVQ TDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSAQPAQNPPVAQPILNSTPATQVTPSPAPA---- 120
           ENKVSEEGFLVVMLSKSKTS SAGQSS QPAQNPPVAQP+L+STPA QVTPSP PA    
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSVSAGQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPAAQVT 120

Query: 121 ----------PQAPTQAPSSAPKNTTSTSDRATDKNFLIFSFGGIVCSVQTDTYGQAASN 180
                      QAPTQAPSSAPKNTTSTS+R TD             +VQTDTYGQAASN
Sbjct: 121 PSPTPAPQAPTQAPTQAPSSAPKNTTSTSERVTD-------------NVQTDTYGQAASN 180

Query: 181 LVAGNNLEQTIQQIMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVG 240
           LVAGNNLEQT+QQ+MDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVG
Sbjct: 181 LVAGNNLEQTVQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVG 240

Query: 241 RFGSGQATETDASLPAPVSGAPNTAPLNMFPQEALSAGS-GGGVNLGSLEFLRNNPQFQA 300
           RFGSGQATETDAS+PAPVSGAPNTAPLNMFPQEALSAGS GGG NLGSLEFLRNNPQFQA
Sbjct: 241 RFGSGQATETDASVPAPVSGAPNTAPLNMFPQEALSAGSGGGGGNLGSLEFLRNNPQFQA 300

Query: 301 LRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFDGTETVSGSGIV 360
           LRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNF+G        + 
Sbjct: 301 LRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGE-------MF 360

Query: 361 RDAEAVDMPDAINVTPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDF 408
             AE  DMP AINVTPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDF
Sbjct: 361 EQAEP-DMPHAINVTPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDF 401

[Close]

BLAST of Spg038689 vs. NCBI nr
Match: XP_022934936.1 (ubiquitin receptor RAD23b-like [Cucurbita moschata])

HSP 1 Score: 663.3 bits (1710), Expect = 1.3e-186
Identity = 358/407 (87.96%), Postives = 365/407 (89.68%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIED+QGKDNYPCGQQLLIHNGKVLKDESTLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSAQPAQNPPVAQPILNSTPATQVTPSPAPAPQAP 120
           ENKVSEEGFLVVMLSKSKTSGSAGQSS QPAQ+ PVAQPILNS PATQVTPSP PAPQA 
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAQPILNSAPATQVTPSPTPAPQAS 120

Query: 121 TQAPSSAPKNTTSTSDRATDKNFLIFSFGGIVCSVQTDTYGQAASNLVAGNNLEQTIQQI 180
           TQA  SAPKNTTSTSDR TD             S+QTDTYGQAASNLVAGNNLEQTIQQ+
Sbjct: 121 TQAQLSAPKNTTSTSDRVTD-------------SMQTDTYGQAASNLVAGNNLEQTIQQL 180

Query: 181 MDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASL 240
           MDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSG ATET+ASL
Sbjct: 181 MDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASL 240

Query: 241 PAPVSGAPNTAPLNMFPQEALSAGSGGGVNLGSLEFLRNNPQFQALRTMVHTNPQILQPM 300
           PAP SGAPNTAPLNMFPQEALSAG GG   LGSLEFLRNNPQFQALRTMVHTNPQILQPM
Sbjct: 241 PAPASGAPNTAPLNMFPQEALSAGGGG---LGSLEFLRNNPQFQALRTMVHTNPQILQPM 300

Query: 301 LQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFDGTETVSGSGIVRDAEAVDMPDAINVT 360
           LQELGKQNPQLLRLIQDHHAEFLQLINEPVDNF+G        +   AE  DMP AINVT
Sbjct: 301 LQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGE-------MFEQAEP-DMPHAINVT 360

Query: 361 PAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 408
           P EQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 PDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 383

[Close]

BLAST of Spg038689 vs. ExPASy Swiss-Prot
Match: Q84L33 (Ubiquitin receptor RAD23b OS=Arabidopsis thaliana OX=3702 GN=RAD23B PE=1 SV=3)

HSP 1 Score: 480.3 bits (1235), Expect = 2.1e-134
Identity = 266/408 (65.20%), Postives = 309/408 (75.74%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRV P+DT+MAVKKNIED QGKDNYPCGQQLLIHNGKVLKDE++L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSAQPAQ-NPPVAQPILNSTPATQVTPSPAPAPQA 120
           ENKV+EEGFLVVMLSKSK+ GSAGQ+S Q +  + PV+    ++ PA   T   +P P +
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSSVSQPVSATTSSTKPAAPSTTQSSPVPAS 120

Query: 121 PTQAPSSAPKNTTSTSDRATDKNFLIFSFGGIVCSVQTDTYGQAASNLVAGNNLEQTIQQ 180
           P  A                              + QTDTYGQAAS LV+G++LEQ +QQ
Sbjct: 121 PIPAQEQP--------------------------AAQTDTYGQAASTLVSGSSLEQMVQQ 180

Query: 181 IMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDAS 240
           IM+MGGG+WD+ETV RALRAAYNNPERAVDYLYSGIP++AEVAVPV      Q   + A+
Sbjct: 181 IMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAEVAVPV---PEAQIAGSGAA 240

Query: 241 LPAPVSGAPNTAPLNMFPQEALSAGSGGGVNLGSLEFLRNNPQFQALRTMVHTNPQILQP 300
             AP SG PN++PL++FPQE ++A   G  +LG+LEFLRNN QFQ LRTMVH+NPQILQP
Sbjct: 241 PVAPASGGPNSSPLDLFPQETVAAAGSG--DLGTLEFLRNNDQFQQLRTMVHSNPQILQP 300

Query: 301 MLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFDGTETVSGSGIVRDAEAVDMPDAINV 360
           MLQELGKQNPQLLRLIQ++ AEFLQL+NEP +  D      G G + D    +MP AINV
Sbjct: 301 MLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSD------GEGDMFDQPEQEMPHAINV 360

Query: 361 TPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 408
           TPAEQ AI+RLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDF+D
Sbjct: 361 TPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFED 371

[Close]

BLAST of Spg038689 vs. ExPASy Swiss-Prot
Match: Q84L32 (Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana OX=3702 GN=RAD23A PE=2 SV=2)

HSP 1 Score: 449.5 bits (1155), Expect = 4.0e-125
Identity = 253/407 (62.16%), Postives = 305/407 (74.94%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRV PTDT+MAVKKNIED Q KDNYPCGQQLLIHNGKVLKDE+TL 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSAQPAQNPPVAQPILNSTPATQVTPSPAPAPQAP 120
           ENKV+EEGFLVVMLSKSKT+ SAG SS QP            ST  + ++ +   AP + 
Sbjct: 61  ENKVTEEGFLVVMLSKSKTASSAGPSSTQP-----------TSTTTSTISSTTLAAP-ST 120

Query: 121 TQAPSSAPKNTTSTSDRATDKNFLIFSFGGIVCSVQTDTYGQAASNLVAGNNLEQTIQQI 180
           TQ+ +    N+T   ++ T                Q+DTYGQAAS LV+G+++EQ +QQI
Sbjct: 121 TQSIAVPASNSTPVQEQPT---------------AQSDTYGQAASTLVSGSSIEQMVQQI 180

Query: 181 MDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASL 240
           M+MGGG+WD+ETV RALRAAYNNPERAVDYLYSGIPE+  V +P     SG  +  + + 
Sbjct: 181 MEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPET--VTIPATNL-SGVGSGRELTA 240

Query: 241 PAPVSGAPNTAPLNMFPQEALSAGSGGGVNLGSLEFLRNNPQFQALRTMVHTNPQILQPM 300
           P P SG PN++PL++FPQEA+S  +GG  +LG+LEFLR N QFQ LR+MV++NPQILQPM
Sbjct: 241 PPP-SGGPNSSPLDLFPQEAVSDAAGG--DLGTLEFLRGNDQFQQLRSMVNSNPQILQPM 300

Query: 301 LQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFDGTETVSGSGIVRDAEAVDMPDAINVT 360
           LQELGKQNPQLLRLIQ++ AEFLQL+NEP +  DG   +       D    +MP ++NVT
Sbjct: 301 LQELGKQNPQLLRLIQENQAEFLQLLNEPYEGSDGDVDIF------DQPDQEMPHSVNVT 360

Query: 361 PAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 408
           P EQ +IERLEAMGFDRA+VIEAFL+CDRNEELAANYLLE+S DF+D
Sbjct: 361 PEEQESIERLEAMGFDRAIVIEAFLSCDRNEELAANYLLEHSADFED 368

[Close]

BLAST of Spg038689 vs. ExPASy Swiss-Prot
Match: Q84L31 (Ubiquitin receptor RAD23c OS=Arabidopsis thaliana OX=3702 GN=RAD23C PE=1 SV=2)

HSP 1 Score: 382.1 bits (980), Expect = 7.8e-105
Identity = 233/427 (54.57%), Postives = 289/427 (67.68%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MK+ VKTLKG+HFEI V+P D+V+ VKKNIE VQG D YP  +Q+LIH GKVLKDE+T+ 
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60

Query: 61  ENKVSEEGFLVVMLSKSK------TSGSAGQSSAQ---PAQNPPVAQPILNSTPATQVTP 120
           ENKV+E  F+V+M++KSK      +S SAG S A+   P+ + P   P   ++ +  V P
Sbjct: 61  ENKVAENSFIVIMMNKSKPASAAASSASAGTSQAKSIPPSTSQPSISPQTPASVSAPVAP 120

Query: 121 SPA-PAPQAPTQAPSSAPKNTTSTSDRATDKNFLIFSFGGIVCSV----QTDTYGQAASN 180
           +P  P P APT  P+      T T+         I S      S     Q D YGQAASN
Sbjct: 121 APTRPPPPAPTPTPAPVAATETVTTPIPEPVPATISSSTPAPDSAPVGSQGDVYGQAASN 180

Query: 181 LVAGNNLEQTIQQIMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVG 240
           L AG+NLE TIQQI+DMGGG WDRETVV ALRAA+NNPERAV+YLY+GIPE AEV  PV 
Sbjct: 181 LAAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQAEVP-PVA 240

Query: 241 R--FGSGQ----ATETDASLPAPVSGAPNTAPLNMFPQEALSAGSGGGVNLGSLEFLRNN 300
           R    +GQ      +T     AP SG PN  PL++FPQ   + G   G   G+L+FLRN+
Sbjct: 241 RPPASAGQPANPPAQTQQPAAAPASG-PNANPLDLFPQGLPNVGGNPGA--GTLDFLRNS 300

Query: 301 PQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFDGTETVS 360
            QFQALR MV  NPQ+LQPMLQELGKQNP L+RLIQDH A+FL+LINEPV+   G E  S
Sbjct: 301 QQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEG--GGE--S 360

Query: 361 GSGIVRDAEAVDMPDAINVTPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLE 408
           G+ + + A  +  P AI VT  E+ AIERLEAMGF+RALV+E F AC++NEELAANYLL+
Sbjct: 361 GNLLGQMAAGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLD 419

[Close]

BLAST of Spg038689 vs. ExPASy Swiss-Prot
Match: Q84L30 (Ubiquitin receptor RAD23d OS=Arabidopsis thaliana OX=3702 GN=RAD23D PE=1 SV=2)

HSP 1 Score: 375.6 bits (963), Expect = 7.3e-103
Identity = 222/413 (53.75%), Postives = 274/413 (66.34%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MK+ VKTL GS+FEI V+P D V  VK  IE V+G + YP  +Q+LIH GKVLKDE+TL 
Sbjct: 1   MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAE-YPAAKQMLIHQGKVLKDETTLE 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSAQPAQNPPVAQPILNSTPATQVTPSPAPAPQAP 120
           EN V E  F+V+MLSK+K S S   +++ PA  P   QP   +TP      +  P P + 
Sbjct: 61  ENNVVENSFIVIMLSKTKASPSGASTASAPA--PSATQPQTVATPQVSAPTASVPVPTSG 120

Query: 121 TQAPSSAPKNTTSTSDRATDKNFLIFSFGGIVCSVQTDTYGQAASNLVAGNNLEQTIQQI 180
           T A ++AP                         SVQTD YGQAASNLVAG  LE T+QQI
Sbjct: 121 T-ATAAAP---------------------ATAASVQTDVYGQAASNLVAGTTLESTVQQI 180

Query: 181 MDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQ------AT 240
           +DMGGG+WDR+TVVRALRAA+NNPERAV+YLYSGIP  AE+        +G+      A 
Sbjct: 181 LDMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPAQAEIPPVAQAPATGEQAANPLAQ 240

Query: 241 ETDASLPAPVSGAPNTAPLNMFPQEALSAGSGGGVNLGSLEFLRNNPQFQALRTMVHTNP 300
              A+ PA  +G PN  PLN+FPQ   +A +G G   G+L+FLRN+ QFQALR MV  NP
Sbjct: 241 PQQAAAPAAATGGPNANPLNLFPQGMPAADAGAGA--GNLDFLRNSQQFQALRAMVQANP 300

Query: 301 QILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFDGTETVSGSGIVRDAEAVDMP 360
           QILQPMLQELGKQNPQL+RLIQ+H A+FL+LINEPV   +G E V     +   EA  MP
Sbjct: 301 QILQPMLQELGKQNPQLVRLIQEHQADFLRLINEPV---EGEENV-----MEQLEAA-MP 360

Query: 361 DAINVTPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 408
            A+ VTP E+ AIERLE MGFDRA+V+E F AC++NEELAANYLL++  +F+D
Sbjct: 361 QAVTVTPEEREAIERLEGMGFDRAMVLEVFFACNKNEELAANYLLDHMHEFED 377

[Close]

BLAST of Spg038689 vs. ExPASy Swiss-Prot
Match: Q40742 (Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica OX=39947 GN=RAD23 PE=1 SV=2)

HSP 1 Score: 341.7 bits (875), Expect = 1.2e-92
Identity = 203/411 (49.39%), Postives = 262/411 (63.75%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MK++VKTLKGS F+I V     V  VK+ IE  QG+  YP  QQ+LIH GKVLKD++TL 
Sbjct: 1   MKISVKTLKGSTFQIEVDSAQKVADVKRIIETTQGQHIYPAEQQMLIHQGKVLKDDTTLD 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSAQPAQNPPVAQPILNSTPATQVTPSPAPAPQAP 120
           ENKV E  FLV+ML + K     G SS+ PA +   +    N  P TQ  P+ APA QAP
Sbjct: 61  ENKVLENSFLVIMLRQGK-----GSSSSAPATSKAPS----NQAPPTQTVPA-APASQAP 120

Query: 121 TQAPSSAPKNTTSTSDRATDKNFLIFSFGGIVCSVQTDTYGQAASNLVAGNNLEQTIQQI 180
               ++ P   ++ +  AT           +  S + D YGQA SNLVAG+NLE TIQ I
Sbjct: 121 VAPATTVPVTVSAPTPTATAS-----PAPAVAVSSEADNYGQATSNLVAGSNLEATIQSI 180

Query: 181 MDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATE----T 240
           ++MGGG WDR+ V+ AL AA+NNPERAV+YLYSG+PE  ++ VP         T+    T
Sbjct: 181 LEMGGGIWDRDIVLHALSAAFNNPERAVEYLYSGVPEQMDIPVPPPSIQPANPTQASQAT 240

Query: 241 DASLPAPVSGAPNTAPLNMFPQEALSAGSGGGVNLGSLEFLRNNPQFQALRTMVHTNPQI 300
             + P+ +S  PN +PL++FPQ AL   S     LG+L+ LRNN QF+ L ++V  NPQI
Sbjct: 241 QPAAPSILSSGPNASPLDLFPQ-ALPNASTDAAGLGNLDALRNNAQFRTLLSLVQANPQI 300

Query: 301 LQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFDGTETVSGSGIVRDAEAVDMPDA 360
           LQP+LQELGKQNPQ+L+LIQ++ AEFL LINEP +  D    +       D     MP  
Sbjct: 301 LQPLLQELGKQNPQILQLIQENQAEFLHLINEPAEGDDEENLL-------DQFPEAMPQT 360

Query: 361 INVTPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 408
           I VTP E  AI RLEAMGFDRALV++ F AC+++E+LAANYLL++  +FDD
Sbjct: 361 IAVTPEENEAILRLEAMGFDRALVLDVFFACNKDEQLAANYLLDHMNEFDD 388

[Close]

BLAST of Spg038689 vs. ExPASy TrEMBL
Match: A0A1S3CI18 (Ubiquitin receptor RAD23 OS=Cucumis melo OX=3656 GN=LOC103501214 PE=3 SV=1)

HSP 1 Score: 672.9 bits (1735), Expect = 8.2e-190
Identity = 362/408 (88.73%), Postives = 370/408 (90.69%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRVQ TDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSAQPAQNPPVAQPILNSTPATQVTPSPAPAPQAP 120
           ENKVSEEGFLVVMLSKSKTS SAGQSS QPAQNPPVAQP+L+STPA QVTPSP PAPQAP
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSASAGQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPAPQAP 120

Query: 121 TQAPSSAPKNTTSTSDRATDKNFLIFSFGGIVCSVQTDTYGQAASNLVAGNNLEQTIQQI 180
           TQAPSSA KNTTSTSDR TD             +VQTDTYGQAASNLVAGNNLEQT+QQ+
Sbjct: 121 TQAPSSALKNTTSTSDRVTD-------------NVQTDTYGQAASNLVAGNNLEQTVQQL 180

Query: 181 MDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASL 240
           MDMGGG WDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDAS+
Sbjct: 181 MDMGGGTWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASV 240

Query: 241 PAPVSGAPNTAPLNMFPQEALSA-GSGGGVNLGSLEFLRNNPQFQALRTMVHTNPQILQP 300
           PAPVSGAPNTAPLNMFPQEALSA G GGG NLGSLEFLRNNPQFQALRTMVHTNPQILQP
Sbjct: 241 PAPVSGAPNTAPLNMFPQEALSAGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQP 300

Query: 301 MLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFDGTETVSGSGIVRDAEAVDMPDAINV 360
           MLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNF+G        +   AE  DMP AINV
Sbjct: 301 MLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGE-------MFEQAEP-DMPHAINV 360

Query: 361 TPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 408
           TPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 TPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 387

[Close]

BLAST of Spg038689 vs. ExPASy TrEMBL
Match: A0A0A0LF05 (Ubiquitin receptor RAD23 OS=Cucumis sativus OX=3659 GN=Csa_3G710740 PE=3 SV=1)

HSP 1 Score: 672.2 bits (1733), Expect = 1.4e-189
Identity = 364/412 (88.35%), Postives = 373/412 (90.53%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRVQ TDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSAQPAQNPPVAQPILNSTPATQVTPSPAPAP--- 120
           ENKVSEEGFLVVMLSKSKTS SAGQSS QPAQNPPVAQP+L+STPA QVTPSP PAP   
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSVSAGQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPAPQAP 120

Query: 121 -QAPTQAPSSAPKNTTSTSDRATDKNFLIFSFGGIVCSVQTDTYGQAASNLVAGNNLEQT 180
            QAPTQAPSSAPKNTTSTS+R TD             +VQTDTYGQAASNLVAGNNLEQT
Sbjct: 121 TQAPTQAPSSAPKNTTSTSERVTD-------------NVQTDTYGQAASNLVAGNNLEQT 180

Query: 181 IQQIMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATET 240
           +QQ+MDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATET
Sbjct: 181 VQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATET 240

Query: 241 DASLPAPVSGAPNTAPLNMFPQEALSAGS-GGGVNLGSLEFLRNNPQFQALRTMVHTNPQ 300
           DAS+PAPVSGAPNTAPLNMFPQEALSAGS GGG NLGSLEFLRNNPQFQALRTMVHTNPQ
Sbjct: 241 DASVPAPVSGAPNTAPLNMFPQEALSAGSGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQ 300

Query: 301 ILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFDGTETVSGSGIVRDAEAVDMPD 360
           ILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNF+G        +   AE  DMP 
Sbjct: 301 ILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGE-------MFEQAEP-DMPH 360

Query: 361 AINVTPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 408
           AINVTPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 AINVTPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 391

[Close]

BLAST of Spg038689 vs. ExPASy TrEMBL
Match: A0A6J1DGY9 (Ubiquitin receptor RAD23 OS=Momordica charantia OX=3673 GN=LOC111020977 PE=3 SV=1)

HSP 1 Score: 666.0 bits (1717), Expect = 1.0e-187
Identity = 357/408 (87.50%), Postives = 366/408 (89.71%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIED+QGKDNYPCGQQLLIHNGKVLKDESTLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSAQPAQNPPVAQPILNSTPATQVTPSPAPAPQAP 120
           ENKVSEEGFLVVMLSKSKTSGS GQSS QPAQ+PPVAQP+LNSTP TQVTPSP PA QAP
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSGSVGQSSTQPAQSPPVAQPVLNSTPTTQVTPSPTPALQAP 120

Query: 121 TQAPSSAPKNTTSTSDRATDKNFLIFSFGGIVCSVQTDTYGQAASNLVAGNNLEQTIQQI 180
           TQAPSSAP+NTTSTSDR  D             +VQTDTYGQAASNLVAGNNLEQTIQQI
Sbjct: 121 TQAPSSAPRNTTSTSDRVAD-------------NVQTDTYGQAASNLVAGNNLEQTIQQI 180

Query: 181 MDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASL 240
           MDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPE+AEVAVPV RFGSGQATETDASL
Sbjct: 181 MDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPETAEVAVPVARFGSGQATETDASL 240

Query: 241 PAPVSGAPNTAPLNMFPQEALS-AGSGGGVNLGSLEFLRNNPQFQALRTMVHTNPQILQP 300
            AP SGAPNTAPLNMFPQEALS  G GGG NLGSLEFLRNNPQFQALRTMVHTNPQILQP
Sbjct: 241 AAPASGAPNTAPLNMFPQEALSGGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQP 300

Query: 301 MLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFDGTETVSGSGIVRDAEAVDMPDAINV 360
           MLQELGKQNPQLLRLIQDHHAEFLQLINEP+DNF+G        +   AE  DMP AINV
Sbjct: 301 MLQELGKQNPQLLRLIQDHHAEFLQLINEPLDNFEG-------DMFEQAEQ-DMPHAINV 360

Query: 361 TPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 408
           TPAEQAAIERLEAMGFDRA VIEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 TPAEQAAIERLEAMGFDRASVIEAFLACDRNEELAANYLLENSGDFDD 387

[Close]

BLAST of Spg038689 vs. ExPASy TrEMBL
Match: A0A6J1F373 (Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111441959 PE=3 SV=1)

HSP 1 Score: 663.3 bits (1710), Expect = 6.5e-187
Identity = 358/407 (87.96%), Postives = 365/407 (89.68%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIED+QGKDNYPCGQQLLIHNGKVLKDESTLA
Sbjct: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSAQPAQNPPVAQPILNSTPATQVTPSPAPAPQAP 120
           ENKVSEEGFLVVMLSKSKTSGSAGQSS QPAQ+ PVAQPILNS PATQVTPSP PAPQA 
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAQPILNSAPATQVTPSPTPAPQAS 120

Query: 121 TQAPSSAPKNTTSTSDRATDKNFLIFSFGGIVCSVQTDTYGQAASNLVAGNNLEQTIQQI 180
           TQA  SAPKNTTSTSDR TD             S+QTDTYGQAASNLVAGNNLEQTIQQ+
Sbjct: 121 TQAQLSAPKNTTSTSDRVTD-------------SMQTDTYGQAASNLVAGNNLEQTIQQL 180

Query: 181 MDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASL 240
           MDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSG ATET+ASL
Sbjct: 181 MDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASL 240

Query: 241 PAPVSGAPNTAPLNMFPQEALSAGSGGGVNLGSLEFLRNNPQFQALRTMVHTNPQILQPM 300
           PAP SGAPNTAPLNMFPQEALSAG GG   LGSLEFLRNNPQFQALRTMVHTNPQILQPM
Sbjct: 241 PAPASGAPNTAPLNMFPQEALSAGGGG---LGSLEFLRNNPQFQALRTMVHTNPQILQPM 300

Query: 301 LQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFDGTETVSGSGIVRDAEAVDMPDAINVT 360
           LQELGKQNPQLLRLIQDHHAEFLQLINEPVDNF+G        +   AE  DMP AINVT
Sbjct: 301 LQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGE-------MFEQAEP-DMPHAINVT 360

Query: 361 PAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 408
           P EQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 PDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 383

[Close]

BLAST of Spg038689 vs. ExPASy TrEMBL
Match: A0A6J1IZA3 (Ubiquitin receptor RAD23 OS=Cucurbita maxima OX=3661 GN=LOC111482038 PE=3 SV=1)

HSP 1 Score: 661.4 bits (1705), Expect = 2.5e-186
Identity = 357/407 (87.71%), Postives = 364/407 (89.43%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIED+QGKDNYPCGQQLLIHNGKVLKDESTL 
Sbjct: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLV 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSAQPAQNPPVAQPILNSTPATQVTPSPAPAPQAP 120
           ENKVSEEGFLVVMLSKSKTSGSAGQSS QPAQ+ PVAQPILNSTPAT VTPSP PAPQA 
Sbjct: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAQPILNSTPATHVTPSPTPAPQAS 120

Query: 121 TQAPSSAPKNTTSTSDRATDKNFLIFSFGGIVCSVQTDTYGQAASNLVAGNNLEQTIQQI 180
           TQA  SAPKNTTSTSDR TD             S+QTDTYGQAASNLVAGNNLEQTIQQ+
Sbjct: 121 TQAHLSAPKNTTSTSDRVTD-------------SMQTDTYGQAASNLVAGNNLEQTIQQL 180

Query: 181 MDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASL 240
           MDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSG ATET+ASL
Sbjct: 181 MDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASL 240

Query: 241 PAPVSGAPNTAPLNMFPQEALSAGSGGGVNLGSLEFLRNNPQFQALRTMVHTNPQILQPM 300
           PAP SGAPNTAPLNMFPQEALSAG GG   LGSLEFLRNNPQFQALRTMVHTNPQILQPM
Sbjct: 241 PAPASGAPNTAPLNMFPQEALSAGGGG---LGSLEFLRNNPQFQALRTMVHTNPQILQPM 300

Query: 301 LQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFDGTETVSGSGIVRDAEAVDMPDAINVT 360
           LQELGKQNPQLLRLIQDHHAEFLQLINEPVDNF+G        +   AE  DMP AINVT
Sbjct: 301 LQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGE-------MFEQAEP-DMPHAINVT 360

Query: 361 PAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 408
           P EQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 PDEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 383

[Close]

BLAST of Spg038689 vs. TAIR 10
Match: AT1G79650.4 (Rad23 UV excision repair protein family )

HSP 1 Score: 489.6 bits (1259), Expect = 2.5e-138
Identity = 272/417 (65.23%), Postives = 318/417 (76.26%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRV P+DT+MAVKKNIED QGKDNYPCGQQLLIHNGKVLKDE++L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSAQPAQNPPVAQPILNSTPATQVTPSPAPAPQAP 120
           ENKV+EEGFLVVMLSKSK+ GSAGQ+S Q +    V+QP+  +T +T+        P AP
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSS---VSQPVSATTSSTK--------PAAP 120

Query: 121 TQAPSSAPKNTTSTSDRATDKNFLIFSFGGI----------VCSVQTDTYGQAASNLVAG 180
           +   SS    +   +         +FSF G+          V   QTDTYGQAAS LV+G
Sbjct: 121 STTQSSPVPASPIPAQEQPAVYAFVFSFAGLAFCPLYGFPKVSMAQTDTYGQAASTLVSG 180

Query: 181 NNLEQTIQQIMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGS 240
           ++LEQ +QQIM+MGGG+WD+ETV RALRAAYNNPERAVDYLYSGIP++AEVAVPV     
Sbjct: 181 SSLEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAEVAVPV---PE 240

Query: 241 GQATETDASLPAPVSGAPNTAPLNMFPQEALSAGSGGGVNLGSLEFLRNNPQFQALRTMV 300
            Q   + A+  AP SG PN++PL++FPQE ++A   G  +LG+LEFLRNN QFQ LRTMV
Sbjct: 241 AQIAGSGAAPVAPASGGPNSSPLDLFPQETVAAAGSG--DLGTLEFLRNNDQFQQLRTMV 300

Query: 301 HTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFDGTETVSGSGIVRDAEA 360
           H+NPQILQPMLQELGKQNPQLLRLIQ++ AEFLQL+NEP +  D      G G + D   
Sbjct: 301 HSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSD------GEGDMFDQPE 360

Query: 361 VDMPDAINVTPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 408
            +MP AINVTPAEQ AI+RLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDF+D
Sbjct: 361 QEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFED 395

[Close]

BLAST of Spg038689 vs. TAIR 10
Match: AT1G79650.1 (Rad23 UV excision repair protein family )

HSP 1 Score: 480.3 bits (1235), Expect = 1.5e-135
Identity = 266/408 (65.20%), Postives = 309/408 (75.74%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRV P+DT+MAVKKNIED QGKDNYPCGQQLLIHNGKVLKDE++L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSAQPAQ-NPPVAQPILNSTPATQVTPSPAPAPQA 120
           ENKV+EEGFLVVMLSKSK+ GSAGQ+S Q +  + PV+    ++ PA   T   +P P +
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSSVSQPVSATTSSTKPAAPSTTQSSPVPAS 120

Query: 121 PTQAPSSAPKNTTSTSDRATDKNFLIFSFGGIVCSVQTDTYGQAASNLVAGNNLEQTIQQ 180
           P  A                              + QTDTYGQAAS LV+G++LEQ +QQ
Sbjct: 121 PIPAQEQP--------------------------AAQTDTYGQAASTLVSGSSLEQMVQQ 180

Query: 181 IMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDAS 240
           IM+MGGG+WD+ETV RALRAAYNNPERAVDYLYSGIP++AEVAVPV      Q   + A+
Sbjct: 181 IMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAEVAVPV---PEAQIAGSGAA 240

Query: 241 LPAPVSGAPNTAPLNMFPQEALSAGSGGGVNLGSLEFLRNNPQFQALRTMVHTNPQILQP 300
             AP SG PN++PL++FPQE ++A   G  +LG+LEFLRNN QFQ LRTMVH+NPQILQP
Sbjct: 241 PVAPASGGPNSSPLDLFPQETVAAAGSG--DLGTLEFLRNNDQFQQLRTMVHSNPQILQP 300

Query: 301 MLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFDGTETVSGSGIVRDAEAVDMPDAINV 360
           MLQELGKQNPQLLRLIQ++ AEFLQL+NEP +  D      G G + D    +MP AINV
Sbjct: 301 MLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSD------GEGDMFDQPEQEMPHAINV 360

Query: 361 TPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 408
           TPAEQ AI+RLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDF+D
Sbjct: 361 TPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFED 371

[Close]

BLAST of Spg038689 vs. TAIR 10
Match: AT1G79650.2 (Rad23 UV excision repair protein family )

HSP 1 Score: 479.9 bits (1234), Expect = 2.0e-135
Identity = 266/407 (65.36%), Postives = 307/407 (75.43%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRV P+DT+MAVKKNIED QGKDNYPCGQQLLIHNGKVLKDE++L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSAQPAQNPPVAQPILNSTPATQVTPSPAPAPQAP 120
           ENKV+EEGFLVVMLSKSK+ GSAGQ+S Q     PV+    ++ PA   T   +P P +P
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQ-----PVSATTSSTKPAAPSTTQSSPVPASP 120

Query: 121 TQAPSSAPKNTTSTSDRATDKNFLIFSFGGIVCSVQTDTYGQAASNLVAGNNLEQTIQQI 180
             A                              + QTDTYGQAAS LV+G++LEQ +QQI
Sbjct: 121 IPAQEQP--------------------------AAQTDTYGQAASTLVSGSSLEQMVQQI 180

Query: 181 MDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASL 240
           M+MGGG+WD+ETV RALRAAYNNPERAVDYLYSGIP++AEVAVPV      Q   + A+ 
Sbjct: 181 MEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAEVAVPV---PEAQIAGSGAAP 240

Query: 241 PAPVSGAPNTAPLNMFPQEALSAGSGGGVNLGSLEFLRNNPQFQALRTMVHTNPQILQPM 300
            AP SG PN++PL++FPQE ++A   G  +LG+LEFLRNN QFQ LRTMVH+NPQILQPM
Sbjct: 241 VAPASGGPNSSPLDLFPQETVAAAGSG--DLGTLEFLRNNDQFQQLRTMVHSNPQILQPM 300

Query: 301 LQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFDGTETVSGSGIVRDAEAVDMPDAINVT 360
           LQELGKQNPQLLRLIQ++ AEFLQL+NEP +  D      G G + D    +MP AINVT
Sbjct: 301 LQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSD------GEGDMFDQPEQEMPHAINVT 360

Query: 361 PAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 408
           PAEQ AI+RLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDF+D
Sbjct: 361 PAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFED 365

[Close]

BLAST of Spg038689 vs. TAIR 10
Match: AT1G16190.1 (Rad23 UV excision repair protein family )

HSP 1 Score: 449.5 bits (1155), Expect = 2.8e-126
Identity = 253/407 (62.16%), Postives = 305/407 (74.94%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRV PTDT+MAVKKNIED Q KDNYPCGQQLLIHNGKVLKDE+TL 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSAQPAQNPPVAQPILNSTPATQVTPSPAPAPQAP 120
           ENKV+EEGFLVVMLSKSKT+ SAG SS QP            ST  + ++ +   AP + 
Sbjct: 61  ENKVTEEGFLVVMLSKSKTASSAGPSSTQP-----------TSTTTSTISSTTLAAP-ST 120

Query: 121 TQAPSSAPKNTTSTSDRATDKNFLIFSFGGIVCSVQTDTYGQAASNLVAGNNLEQTIQQI 180
           TQ+ +    N+T   ++ T                Q+DTYGQAAS LV+G+++EQ +QQI
Sbjct: 121 TQSIAVPASNSTPVQEQPT---------------AQSDTYGQAASTLVSGSSIEQMVQQI 180

Query: 181 MDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASL 240
           M+MGGG+WD+ETV RALRAAYNNPERAVDYLYSGIPE+  V +P     SG  +  + + 
Sbjct: 181 MEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPET--VTIPATNL-SGVGSGRELTA 240

Query: 241 PAPVSGAPNTAPLNMFPQEALSAGSGGGVNLGSLEFLRNNPQFQALRTMVHTNPQILQPM 300
           P P SG PN++PL++FPQEA+S  +GG  +LG+LEFLR N QFQ LR+MV++NPQILQPM
Sbjct: 241 PPP-SGGPNSSPLDLFPQEAVSDAAGG--DLGTLEFLRGNDQFQQLRSMVNSNPQILQPM 300

Query: 301 LQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFDGTETVSGSGIVRDAEAVDMPDAINVT 360
           LQELGKQNPQLLRLIQ++ AEFLQL+NEP +  DG   +       D    +MP ++NVT
Sbjct: 301 LQELGKQNPQLLRLIQENQAEFLQLLNEPYEGSDGDVDIF------DQPDQEMPHSVNVT 360

Query: 361 PAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 408
           P EQ +IERLEAMGFDRA+VIEAFL+CDRNEELAANYLLE+S DF+D
Sbjct: 361 PEEQESIERLEAMGFDRAIVIEAFLSCDRNEELAANYLLEHSADFED 368

[Close]

BLAST of Spg038689 vs. TAIR 10
Match: AT1G79650.3 (Rad23 UV excision repair protein family )

HSP 1 Score: 433.0 bits (1112), Expect = 2.8e-121
Identity = 248/408 (60.78%), Postives = 290/408 (71.08%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
           MKLTVKTLKGSHFEIRV P+DT+MAVKKNIED QGKDNYPCGQQLLIHNGKVLKDE++L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVSEEGFLVVMLSKSKTSGSAGQSSAQPAQ-NPPVAQPILNSTPATQVTPSPAPAPQA 120
           ENKV+EEGFLVVMLSKSK+ GSAGQ+S Q +  + PV+    ++ PA   T   +P P +
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSSVSQPVSATTSSTKPAAPSTTQSSPVPAS 120

Query: 121 PTQAPSSAPKNTTSTSDRATDKNFLIFSFGGIVCSVQTDTYGQAASNLVAGNNLEQTIQQ 180
           P  A                              + QTDTYGQAAS LV+G++LEQ +QQ
Sbjct: 121 PIPAQEQP--------------------------AAQTDTYGQAASTLVSGSSLEQMVQQ 180

Query: 181 IMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDAS 240
           IM+MGGG+WD+ETV RALRAAYNNPERAVDYLYSGIP++AEVAVPV      Q   + A+
Sbjct: 181 IMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAEVAVPV---PEAQIAGSGAA 240

Query: 241 LPAPVSGAPNTAPLNMFPQEALSAGSGGGVNLGSLEFLRNNPQFQALRTMVHTNPQILQP 300
             AP SG PN++PL++FPQE ++A   G  +LG+LEFLRNN                   
Sbjct: 241 PVAPASGGPNSSPLDLFPQETVAAAGSG--DLGTLEFLRNND------------------ 300

Query: 301 MLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFDGTETVSGSGIVRDAEAVDMPDAINV 360
             QELGKQNPQLLRLIQ++ AEFLQL+NEP +  D      G G + D    +MP AINV
Sbjct: 301 --QELGKQNPQLLRLIQENQAEFLQLVNEPYEGSD------GEGDMFDQPEQEMPHAINV 351

Query: 361 TPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 408
           TPAEQ AI+RLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDF+D
Sbjct: 361 TPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFED 351

The following BLAST results are available for this feature:

BLAST of Spg038689 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906275.1	2.8e-192	89.71	ubiquitin receptor RAD23b-like [Benincasa hispida]	[more]
XP_008462953.1	1.7e-189	88.73	PREDICTED: ubiquitin receptor RAD23b isoform X1 [Cucumis melo]	[more]
XP_022153480.1	2.1e-187	87.50	ubiquitin receptor RAD23b-like [Momordica charantia]	[more]
XP_011651807.2	3.5e-187	86.02	ubiquitin receptor RAD23b [Cucumis sativus] >KAE8650953.1 hypothetical protein C...	[more]
XP_022934936.1	1.3e-186	87.96	ubiquitin receptor RAD23b-like [Cucurbita moschata]	[more]

BLAST of Spg038689 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84L33	2.1e-134	65.20	Ubiquitin receptor RAD23b OS=Arabidopsis thaliana OX=3702 GN=RAD23B PE=1 SV=3	[more]
Q84L32	4.0e-125	62.16	Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana OX=3702 GN=RAD23A PE=...	[more]
Q84L31	7.8e-105	54.57	Ubiquitin receptor RAD23c OS=Arabidopsis thaliana OX=3702 GN=RAD23C PE=1 SV=2	[more]
Q84L30	7.3e-103	53.75	Ubiquitin receptor RAD23d OS=Arabidopsis thaliana OX=3702 GN=RAD23D PE=1 SV=2	[more]
Q40742	1.2e-92	49.39	Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica OX=39947 GN=RA...	[more]

BLAST of Spg038689 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CI18	8.2e-190	88.73	Ubiquitin receptor RAD23 OS=Cucumis melo OX=3656 GN=LOC103501214 PE=3 SV=1	[more]
A0A0A0LF05	1.4e-189	88.35	Ubiquitin receptor RAD23 OS=Cucumis sativus OX=3659 GN=Csa_3G710740 PE=3 SV=1	[more]
A0A6J1DGY9	1.0e-187	87.50	Ubiquitin receptor RAD23 OS=Momordica charantia OX=3673 GN=LOC111020977 PE=3 SV=...	[more]
A0A6J1F373	6.5e-187	87.96	Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111441959 PE=3 SV=1	[more]
A0A6J1IZA3	2.5e-186	87.71	Ubiquitin receptor RAD23 OS=Cucurbita maxima OX=3661 GN=LOC111482038 PE=3 SV=1	[more]

BLAST of Spg038689 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79650.4	2.5e-138	65.23	Rad23 UV excision repair protein family	[more]
AT1G79650.1	1.5e-135	65.20	Rad23 UV excision repair protein family	[more]
AT1G79650.2	2.0e-135	65.36	Rad23 UV excision repair protein family	[more]
AT1G16190.1	2.8e-126	62.16	Rad23 UV excision repair protein family	[more]
AT1G79650.3	2.8e-121	60.78	Rad23 UV excision repair protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004806	UV excision repair protein Rad23	PRINTS	PR01839	RAD23PROTEIN	coord: 300..322 score: 59.68 coord: 374..388 score: 65.76 coord: 357..373 score: 62.3 coord: 389..404 score: 62.78
IPR004806	UV excision repair protein Rad23	TIGRFAM	TIGR00601	TIGR00601	coord: 1..406 e-value: 1.1E-128 score: 427.6
IPR006636	Heat shock chaperonin-binding	SMART	SM00727	CBM	coord: 272..315 e-value: 3.3E-7 score: 40.0
IPR015940	Ubiquitin-associated domain	SMART	SM00165	uba_6	coord: 173..213 e-value: 1.9E-6 score: 37.4 coord: 363..400 e-value: 1.3E-7 score: 41.3
IPR015940	Ubiquitin-associated domain	PFAM	PF00627	UBA	coord: 173..211 e-value: 1.3E-15 score: 56.9 coord: 363..398 e-value: 3.0E-11 score: 43.0
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 361..401 score: 14.836119
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 171..214 score: 13.101127
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 1..75 e-value: 4.6E-23 score: 92.6
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 3..76 e-value: 1.6E-16 score: 59.8
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..79 score: 18.802267
IPR015360	XPC-binding domain	PFAM	PF09280	XPC-binding	coord: 274..329 e-value: 1.2E-23 score: 82.6
None	No IPR available	GENE3D	1.10.8.10		coord: 166..216 e-value: 1.1E-22 score: 81.6
None	No IPR available	GENE3D	1.10.8.10		coord: 355..402 e-value: 2.9E-23 score: 83.6
None	No IPR available	GENE3D	3.10.20.90		coord: 1..77 e-value: 3.1E-26 score: 93.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..109
None	No IPR available	PANTHER	PTHR10621	UV EXCISION REPAIR PROTEIN RAD23	coord: 1..133
None	No IPR available	PANTHER	PTHR10621	UV EXCISION REPAIR PROTEIN RAD23	coord: 153..406
None	No IPR available	PANTHER	PTHR10621:SF32	UBIQUITIN RECEPTOR RAD23A-RELATED	coord: 1..133
None	No IPR available	PANTHER	PTHR10621:SF32	UBIQUITIN RECEPTOR RAD23A-RELATED	coord: 153..406
None	No IPR available	CDD	cd01805	Ubl_Rad23	coord: 1..74 e-value: 5.73175E-30 score: 108.413
None	No IPR available	CDD	cd14379	UBA1_Rad23_plant	coord: 167..216 e-value: 2.34317E-31 score: 111.55
IPR036353	XPC-binding domain superfamily	GENE3D	1.10.10.540		coord: 264..330 e-value: 4.2E-27 score: 95.5
IPR036353	XPC-binding domain superfamily	SUPERFAMILY	101238	XPC-binding domain	coord: 272..336
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 1..85
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 348..405
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 170..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg038689.1	Spg038689.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006289	nucleotide-excision repair
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005654	nucleoplasm
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0031593	polyubiquitin modification-dependent protein binding
molecular_function	GO:0070628	proteasome binding
molecular_function	GO:0043130	ubiquitin binding
molecular_function	GO:0005515	protein binding