Spg038669 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg038669
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionbeta-glucosidase 11-like isoform X1
Locationscaffold12: 3882657 .. 3886029 (-)
RNA-Seq ExpressionSpg038669
SyntenySpg038669
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGGGTTATTACAAGCTAGATGTCAGTTGAGCCAAGTCTTGTTGGCGAGGTCATCAATGGTTAGTATACCAACATTTTAATAGGTGAAATTTGTACAACATAAAGTTAAATTATTAAGCTTATTTCATCGAATTAAAACATAGAGTATTTTTTTTTTTAAATACTAAATAAGTAAAAGCCTTCAATTAGTAAAGTTTTTTTTTTTTTTTTTTTTTTTACAATATGTGGGGAAGAGGGATTCGAACCACATACCTTGTGGTTACCTACGACTTTATGCCAGTTGAGCTAAGCTCTTGTTGGCAATTAGTAAAGATTTTTGACACAATCTTTTGAGATAAAAACACATTAGAAAAAAATCAATTATTTATACTTCTAAACTTTGTGGCTCGAATCATTTAAAACTTTAAACTAATAGTTATACCAATAAAAAATACCCTACACTTTCATAAGTGAATCAATTTAGACCCCTTTATTAATGATATATAACTATTTTCACTTGAAGTTCCATTTAAAACAATTACCTAAATAAAATTACGTTTCTCCCAAAATTCTACTAAAGTAGAAAGAAAACGTAATTCTTTCTAAATAAGAAAAAAAAAAAAAAAAAAGGAAAAATAGGAGATGAAAAGCCATTCATATTAATACACATGTAGGCCTACTGGAAAGGTACTTTCTAATTTGAAAAAATGATTCTACTACCATGTATATGATGGGATATAAAAGAAGAAGAAAGCAGGTTCTTCTCTCGAGCCTATTTTCTTTCATTGATCTTGCCACTTAGAACGGATATGTAGGTTTGTCTTTCTGATCTTGCTCAAGGTAGTTGTAGCTTGCTTCCAATTCCAAGCGCTAGCGATAGTAGAAGCTACTCACCAGAAGCAGTTGCTACTACCCTTGATTCTAACATTTTCCATAATACTATGTTAATCTTTGCATTTAAAGAAGTTTCACATAGTGCTGACTAAACTTGTAATTTAATGTGAACTCGAATAAGCATGCAACCGAAACGCACAGAAAAATCCTTTTTTTTTTTTTTTTTTTGACAATATGTGGGGAGGGGGATTCGAACCACAAACCTTGTGGTTATCGGTTCAACTTTTTGCCAGTTGAGCTAAGCTCTTGTTGGCTAGAAAAATCCATTTTCGTCACTTATTAATTTTTGCCAAATATATATTTAGTCCTTTTAATAGTTTTTTTTTCCTTTCAATATAGTCTCATATATTTTAAAAAATTTCAACTATACCCTCTATCTCAACAATTGTTAACTTTACCTGACATGATATTTAGTGAACTGGACAAATTTTGGAGATGAAATTAGACTACCTTAGAAGAAATTCTTTTTACTAACTTCTTAACAATTTAAACAGATTATCAACTTCTCTCTTAGTTTTTAAAGTTCAGGGGCCTATTGGAAAACAAAACTAAAAGTTCGAAGACTTAATTGAAACTTTTAAAAGGACTAAATTGACACAATCTTGAAACTTGAGGGTGTTTGGGGCAATGAGTTGTGAAGTTAATAACTCCACCCAACTCCTTGTTTGGTCCAAGGATATACAACATCCAATTGTGGAGCCCACAAATTTATCAACCAATCACAACACTCTATTGTGGATCCCACAAACTTTTTAACTCTTATTTCAACCCTTTATTATGAGTATTACAAACTTATTAACTCCTATTCTAACTTCTAAGACAAACCAACTCCAAATTTCATAACTTAACTCCTTGCCCCAAACACCTTCTCGTGAATAAACTTGTAATTTAACCTAAAACAAATAAATTTATAAGTGAAAGTAATTTTTATAAATTAAAATTTCAAAAAGTCAAAAATAAAAAAGGAAATTAGGGTTATAGACAAAATGATTACTCAATCCAATTATCATAAGAAAGTAGAAACGGGCCCAAAATAATTAAATCGATTAAATTGTCAAATCCAAAGGATAATTAGTTTGAAAATGAAAACAAAACGACGTGATTACCAATATAACCAGCTCATGACCATGGCCTTTTTCGAGCGGTGGAATCACATCAAACAAAAAATTAAAAGATAAAAAAGTCTCAAATGGAAGCCATCGCCATCGCCATTTTTGAAGCTTTAGCTTTTTCTGTGCTCTCTCATAGTCATGGCAGATGACTTTTCATTTTGTTATAAAATCATTCTCTGAAGAACTCTTGGGTCTTGATCTTGAGACTGTCCAAAAGATGTCAAACTTGGGTTTGATTTTGGTGTTGTTGATGCTTCTGTTAAATTCAAGTACTTTAGAAGCTGTTGGTGTTGCTGGTGATTACAGCAGAAGTGATTTTCCACCTGGTTTTGTTTTTGGATCTGGCTCCACTGCTTATCAGGTCACTTGCTTTTTCCTTTTTTAATCTTTGGATTTTGGAAATTGATGGATATGTTTGGAAGTCTTTTTTTTTTTTTTTTGAGAAAATAAAATGCATTAAAAGATCAAAAGGTGGGTACATCGGAATCGTTCTAGCTCCAAACAAGAAACAATCCAAAAAGGGATATAAAGACATCCCTGTTGCATTCGTTCTCCCCCAAATCAGGGAAAGTCTCATGCCCCAAAAAAAACCAAAGATAAATCTCCATGCCACACTGTAATTCATGCCTATTTGTGCTAAGTTGTTGATCAAATTAGATTAAATCGGGTTGAGTTCAATTTAAACTCAAATTCATTAATTTCACACTTATTTTCAAAAAAAAAAAAAAAAATTCATTAATTTCACCTAAGCTCATGAATGGGTCTATATACAATCAAGCCCAAACCCATGGATGGACTCCAAATGCAATCAAGTCCAAGCCCATGAAGGCCTCTTGAAGACTCTATAAATAGGAAGTTTTGGCTCTCGTTATGGGGACGACGGTGAGAAAGGAAGAAGAGGAAGACTAGAAAAGCTCATTGAAAATTGAAGCTCATCCTGCAAAACCGAAGATTGAAGCCTAGATCCTCTTGCAAAACTGGAGATCAAAGCTCAGATCTTCCTCAAATTCTGTTGCAAAACTGATGATCGAAGCTTAAATTCTCTTCAAATCTTGTTGCAAAACTGAAGAGCGAATCTCATATCCTCTTCAAATCCTGCTGCAAAACTGAAGATTGAAGTCCAGATCCTCCTACAAAGCTGAAGATCGAAGCTCAAATCCTCTACAAATCATGCTGCAAAACTGAAGATCGAAACTCAAGCTCAGAGCCTTCTGCAGACTTAAAGACTAAAGTCTACCTCAATCTAGAAGAACTCAAATCCTTCTGACCTTCAAGACTCTGACTAAAGCTTCTTGAAGACTTCCAGAAGATCAAAAGACTTCTTGAAGCTCACGAAGCCCTTGAAACAAACTTCAATCTCAAGAACAAGCTGCAAAATCCTTAA

mRNA sequence

ATGGCCGGGTTATTACAAGCTAGATGTCAGTTGAGCCAAGTCTTGTTGGCGAGGTCATCAATGGTTTGTCTTTCTGATCTTGCTCAAGGTAGTTGTAGCTTGCTTCCAATTCCAAGCGCTAGCGATAGTAGAAGCTACTCACCAGAAGCAGTTGCTACTACCCTTGATTCTAACATTTTCCATAATACTATGTTAATCTTTGCATTTAAAGAATCATGGCAGATGACTTTTCATTTTGTTATAAAATCATTCTCTGAAGAACTCTTGGGTCTTGATCTTGAGACTGTCCAAAAGATGTCAAACTTGGGTTTGATTTTGGTGTTGTTGATGCTTCTGTTAAATTCAAGTACTTTAGAAGCTGTTGGTGTTGCTGGTGATTACAGCAGAAGTGATTTTCCACCTGGTTTTGTTTTTGGATCTGGCTCCACTGCTTATCAGCTTCTTGAAGACTTCCAGAAGATCAAAAGACTTCTTGAAGCTCACGAAGCCCTTGAAACAAACTTCAATCTCAAGAACAAGCTGCAAAATCCTTAA

Coding sequence (CDS)

ATGGCCGGGTTATTACAAGCTAGATGTCAGTTGAGCCAAGTCTTGTTGGCGAGGTCATCAATGGTTTGTCTTTCTGATCTTGCTCAAGGTAGTTGTAGCTTGCTTCCAATTCCAAGCGCTAGCGATAGTAGAAGCTACTCACCAGAAGCAGTTGCTACTACCCTTGATTCTAACATTTTCCATAATACTATGTTAATCTTTGCATTTAAAGAATCATGGCAGATGACTTTTCATTTTGTTATAAAATCATTCTCTGAAGAACTCTTGGGTCTTGATCTTGAGACTGTCCAAAAGATGTCAAACTTGGGTTTGATTTTGGTGTTGTTGATGCTTCTGTTAAATTCAAGTACTTTAGAAGCTGTTGGTGTTGCTGGTGATTACAGCAGAAGTGATTTTCCACCTGGTTTTGTTTTTGGATCTGGCTCCACTGCTTATCAGCTTCTTGAAGACTTCCAGAAGATCAAAAGACTTCTTGAAGCTCACGAAGCCCTTGAAACAAACTTCAATCTCAAGAACAAGCTGCAAAATCCTTAA

Protein sequence

MAGLLQARCQLSQVLLARSSMVCLSDLAQGSCSLLPIPSASDSRSYSPEAVATTLDSNIFHNTMLIFAFKESWQMTFHFVIKSFSEELLGLDLETVQKMSNLGLILVLLMLLLNSSTLEAVGVAGDYSRSDFPPGFVFGSGSTAYQLLEDFQKIKRLLEAHEALETNFNLKNKLQNP
Homology
[Close]
BLAST of Spg038669 vs. NCBI nr
Match: XP_038905447.1 (beta-glucosidase 11-like [Benincasa hispida])

HSP 1 Score: 63.9 bits (154), Expect = 1.6e-06
Identity = 35/49 (71.43%), Postives = 41/49 (83.67%), Query Frame = 0 

Query: 99  MSNLGLILVLLMLLLNSSTLEAVGVAGDYSRSDFPPGFVFGSGSTAYQL 148
           MS LGL++ LL+LLLNSS L AV V  DYSR+DFPP FVFGSG+TAYQ+
Sbjct: 1   MSYLGLVIGLLLLLLNSS-LGAVAVTYDYSRNDFPPSFVFGSGTTAYQV 48

[Close]
BLAST of Spg038669 vs. NCBI nr
Match: XP_008454350.1 (PREDICTED: beta-glucosidase 11-like isoform X3 [Cucumis melo] >XP_008454351.1 PREDICTED: beta-glucosidase 11-like isoform X3 [Cucumis melo])

HSP 1 Score: 61.2 bits (147), Expect = 1.0e-05
Identity = 33/51 (64.71%), Postives = 41/51 (80.39%), Query Frame = 0 

Query: 99  MSNLGLI--LVLLMLLLNSSTLEAVGVAGDYSRSDFPPGFVFGSGSTAYQL 148
           MSNLGL   L+LL++LL +S+LEAV V  DY+R DFPP FVFGS +TAYQ+
Sbjct: 1   MSNLGLTIGLLLLLILLINSSLEAVAVVDDYTRDDFPPTFVFGSATTAYQV 51

[Close]
BLAST of Spg038669 vs. NCBI nr
Match: XP_008454349.1 (PREDICTED: beta-glucosidase 11-like isoform X2 [Cucumis melo])

HSP 1 Score: 61.2 bits (147), Expect = 1.0e-05
Identity = 33/51 (64.71%), Postives = 41/51 (80.39%), Query Frame = 0 

Query: 99  MSNLGLI--LVLLMLLLNSSTLEAVGVAGDYSRSDFPPGFVFGSGSTAYQL 148
           MSNLGL   L+LL++LL +S+LEAV V  DY+R DFPP FVFGS +TAYQ+
Sbjct: 42  MSNLGLTIGLLLLLILLINSSLEAVAVVDDYTRDDFPPTFVFGSATTAYQV 92

[Close]
BLAST of Spg038669 vs. NCBI nr
Match: XP_008454348.1 (PREDICTED: beta-glucosidase 11-like isoform X1 [Cucumis melo])

HSP 1 Score: 61.2 bits (147), Expect = 1.0e-05
Identity = 33/51 (64.71%), Postives = 41/51 (80.39%), Query Frame = 0 

Query: 99  MSNLGLI--LVLLMLLLNSSTLEAVGVAGDYSRSDFPPGFVFGSGSTAYQL 148
           MSNLGL   L+LL++LL +S+LEAV V  DY+R DFPP FVFGS +TAYQ+
Sbjct: 48  MSNLGLTIGLLLLLILLINSSLEAVAVVDDYTRDDFPPTFVFGSATTAYQV 98

[Close]
BLAST of Spg038669 vs. NCBI nr
Match: KAA0044373.1 (beta-glucosidase 11-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 61.2 bits (147), Expect = 1.0e-05
Identity = 33/51 (64.71%), Postives = 41/51 (80.39%), Query Frame = 0 

Query: 99  MSNLGLI--LVLLMLLLNSSTLEAVGVAGDYSRSDFPPGFVFGSGSTAYQL 148
           MSNLGL   L+LL++LL +S+LEAV V  DY+R DFPP FVFGS +TAYQ+
Sbjct: 16  MSNLGLTIGLLLLLILLINSSLEAVAVVDDYTRDDFPPTFVFGSATTAYQV 66

[Close]
BLAST of Spg038669 vs. ExPASy TrEMBL
Match: A0A1S3BYD9 (beta-glucosidase 11-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103494776 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 4.9e-06
Identity = 33/51 (64.71%), Postives = 41/51 (80.39%), Query Frame = 0 

Query: 99  MSNLGLI--LVLLMLLLNSSTLEAVGVAGDYSRSDFPPGFVFGSGSTAYQL 148
           MSNLGL   L+LL++LL +S+LEAV V  DY+R DFPP FVFGS +TAYQ+
Sbjct: 1   MSNLGLTIGLLLLLILLINSSLEAVAVVDDYTRDDFPPTFVFGSATTAYQV 51

[Close]
BLAST of Spg038669 vs. ExPASy TrEMBL
Match: A0A5A7TLI1 (Beta-glucosidase 11-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G001000 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 4.9e-06
Identity = 33/51 (64.71%), Postives = 41/51 (80.39%), Query Frame = 0 

Query: 99  MSNLGLI--LVLLMLLLNSSTLEAVGVAGDYSRSDFPPGFVFGSGSTAYQL 148
           MSNLGL   L+LL++LL +S+LEAV V  DY+R DFPP FVFGS +TAYQ+
Sbjct: 16  MSNLGLTIGLLLLLILLINSSLEAVAVVDDYTRDDFPPTFVFGSATTAYQV 66

[Close]
BLAST of Spg038669 vs. ExPASy TrEMBL
Match: A0A1S3BXW7 (beta-glucosidase 11-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494776 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 4.9e-06
Identity = 33/51 (64.71%), Postives = 41/51 (80.39%), Query Frame = 0 

Query: 99  MSNLGLI--LVLLMLLLNSSTLEAVGVAGDYSRSDFPPGFVFGSGSTAYQL 148
           MSNLGL   L+LL++LL +S+LEAV V  DY+R DFPP FVFGS +TAYQ+
Sbjct: 48  MSNLGLTIGLLLLLILLINSSLEAVAVVDDYTRDDFPPTFVFGSATTAYQV 98

[Close]
BLAST of Spg038669 vs. ExPASy TrEMBL
Match: A0A1S3BYH7 (beta-glucosidase 11-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494776 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 4.9e-06
Identity = 33/51 (64.71%), Postives = 41/51 (80.39%), Query Frame = 0 

Query: 99  MSNLGLI--LVLLMLLLNSSTLEAVGVAGDYSRSDFPPGFVFGSGSTAYQL 148
           MSNLGL   L+LL++LL +S+LEAV V  DY+R DFPP FVFGS +TAYQ+
Sbjct: 42  MSNLGLTIGLLLLLILLINSSLEAVAVVDDYTRDDFPPTFVFGSATTAYQV 92

[Close]
BLAST of Spg038669 vs. ExPASy TrEMBL
Match: A0A0A0KT48 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001720 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.1e-05
Identity = 32/53 (60.38%), Postives = 42/53 (79.25%), Query Frame = 0 

Query: 97  QKMSNLGLI--LVLLMLLLNSSTLEAVGVAGDYSRSDFPPGFVFGSGSTAYQL 148
           ++MSNLG+   L+LL+ LL +S+L+ V V  DY+RSDFPP FVFGS STAYQ+
Sbjct: 54  ERMSNLGVTIGLLLLLTLLFNSSLKVVAVIDDYTRSDFPPTFVFGSASTAYQV 106

[Close]
BLAST of Spg038669 vs. TAIR 10
Match: AT1G02850.1 (beta glucosidase 11 )

HSP 1 Score: 42.0 bits (97), Expect = 5.9e-04
Identity = 26/50 (52.00%), Postives = 35/50 (70.00%), Query Frame = 0 

Query: 99  MSNLGLILVLLMLLLNS-STLEAVGVAGDYSRSDFPPGFVFGSGSTAYQL 148
           +SN  + L LL L L + S+L+       YSR+DFPPGFVFGSG++AYQ+
Sbjct: 4   LSNSLMFLPLLALALTAVSSLK-------YSRNDFPPGFVFGSGTSAYQV 46

[Close]
BLAST of Spg038669 vs. TAIR 10
Match: AT1G02850.3 (beta glucosidase 11 )

HSP 1 Score: 42.0 bits (97), Expect = 5.9e-04
Identity = 26/50 (52.00%), Postives = 35/50 (70.00%), Query Frame = 0 

Query: 99  MSNLGLILVLLMLLLNS-STLEAVGVAGDYSRSDFPPGFVFGSGSTAYQL 148
           +SN  + L LL L L + S+L+       YSR+DFPPGFVFGSG++AYQ+
Sbjct: 4   LSNSLMFLPLLALALTAVSSLK-------YSRNDFPPGFVFGSGTSAYQV 46

[Close]
BLAST of Spg038669 vs. TAIR 10
Match: AT1G02850.2 (beta glucosidase 11 )

HSP 1 Score: 42.0 bits (97), Expect = 5.9e-04
Identity = 26/50 (52.00%), Postives = 35/50 (70.00%), Query Frame = 0 

Query: 99  MSNLGLILVLLMLLLNS-STLEAVGVAGDYSRSDFPPGFVFGSGSTAYQL 148
           +SN  + L LL L L + S+L+       YSR+DFPPGFVFGSG++AYQ+
Sbjct: 4   LSNSLMFLPLLALALTAVSSLK-------YSRNDFPPGFVFGSGTSAYQV 46

[Close]
BLAST of Spg038669 vs. TAIR 10
Match: AT1G02850.4 (beta glucosidase 11 )

HSP 1 Score: 42.0 bits (97), Expect = 5.9e-04
Identity = 26/50 (52.00%), Postives = 35/50 (70.00%), Query Frame = 0 

Query: 99  MSNLGLILVLLMLLLNS-STLEAVGVAGDYSRSDFPPGFVFGSGSTAYQL 148
           +SN  + L LL L L + S+L+       YSR+DFPPGFVFGSG++AYQ+
Sbjct: 4   LSNSLMFLPLLALALTAVSSLK-------YSRNDFPPGFVFGSGTSAYQV 46

[Close]
BLAST of Spg038669 vs. TAIR 10
Match: AT1G02850.5 (beta glucosidase 11 )

HSP 1 Score: 42.0 bits (97), Expect = 5.9e-04
Identity = 26/50 (52.00%), Postives = 35/50 (70.00%), Query Frame = 0 

Query: 99  MSNLGLILVLLMLLLNS-STLEAVGVAGDYSRSDFPPGFVFGSGSTAYQL 148
           +SN  + L LL L L + S+L+       YSR+DFPPGFVFGSG++AYQ+
Sbjct: 4   LSNSLMFLPLLALALTAVSSLK-------YSRNDFPPGFVFGSGTSAYQV 46

The following BLAST results are available for this feature:
BLAST of Spg038669 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038905447.11.6e-0671.43beta-glucosidase 11-like [Benincasa hispida][more]
XP_008454350.11.0e-0564.71PREDICTED: beta-glucosidase 11-like isoform X3 [Cucumis melo] >XP_008454351.1 PR... [more]
XP_008454349.11.0e-0564.71PREDICTED: beta-glucosidase 11-like isoform X2 [Cucumis melo][more]
XP_008454348.11.0e-0564.71PREDICTED: beta-glucosidase 11-like isoform X1 [Cucumis melo][more]
KAA0044373.11.0e-0564.71beta-glucosidase 11-like isoform X1 [Cucumis melo var. makuwa][more]
BLAST of Spg038669 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg038669 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BYD94.9e-0664.71beta-glucosidase 11-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103494776 PE=3... [more]
A0A5A7TLI14.9e-0664.71Beta-glucosidase 11-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A1S3BXW74.9e-0664.71beta-glucosidase 11-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494776 PE=3... [more]
A0A1S3BYH74.9e-0664.71beta-glucosidase 11-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494776 PE=3... [more]
A0A0A0KT481.1e-0560.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001720 PE=3 SV=1[more]
BLAST of Spg038669 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G02850.15.9e-0452.00beta glucosidase 11 [more]
AT1G02850.35.9e-0452.00beta glucosidase 11 [more]
AT1G02850.25.9e-0452.00beta glucosidase 11 [more]
AT1G02850.45.9e-0452.00beta glucosidase 11 [more]
AT1G02850.55.9e-0452.00beta glucosidase 11 [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg038669.1Spg038669.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds