Spg038633 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg038633
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	stress-induced protein KIN2-like
Location	scaffold12: 523066 .. 523740 (-)
RNA-Seq Expression	Spg038633
Synteny	Spg038633

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTATTCTCTAAAAATAAAAATCCTTTCAAGTTTTCAACTATTTGTGAGTTTTTCTAAATTTCTTTAGAAAAGAAAATGGCAGACAACTCTCAACAGATGAGTTACCACATTGGAGAAGCCAAAGGCCAAGCACAGGTTCACTTTGCCACTATTAATGATTTTTAGCCATGTCATTATTTTTTAAAATAGGTCATGCTTTAAATATATATAGTTTTGTGATATAAGTGGTATATAATCCAAACATTATTTTTAATGAGGGGTTGTCTTGTTGAAAATTTTCATATTTATATTAGATTGCCTTTCAAGATTAAGGAGTGATTGGTAACATATATCGATTTGTGTGATTATGTAGGAGAAGGCGAGCAATGTGATGGACAAAGCAAGTGATGTAGCCCAATCGACCAAGGACTCAATACAAGAGGCAGGTCAACAGATAAAGGCCAAGGCACAGGGTGCAGTCGATGCTGTCAAGGATGCCACTGGCATGAACAATAAATGAAACTTTTCCATTTCCCACTTTTTTTTTTTTTTCTCCAAACGACTTGCTTCATTTTTCAAGTTTATTTTCCTTTTGTGTGTGGACAAACAAAAAAAAATAAAGCTCTAATGTGTCTTTTCTCTCCATAAGATGAATTAGGAGTAATTAAATATAGGCAAGACAATTCTTGATAAT

mRNA sequence

ATGGCAGACAACTCTCAACAGATGAGTTACCACATTGGAGAAGCCAAAGGCCAAGCACAGGAGAAGGCGAGCAATGTGATGGACAAAGCAAGTGATGTAGCCCAATCGACCAAGGACTCAATACAAGAGGCAGGTCAACAGATAAAGGCCAAGGCACAGGGTGCAGTCGATGCTGTCAAGGATGCCACTGGCATGAACAATAAATGA

Coding sequence (CDS)

ATGGCAGACAACTCTCAACAGATGAGTTACCACATTGGAGAAGCCAAAGGCCAAGCACAGGAGAAGGCGAGCAATGTGATGGACAAAGCAAGTGATGTAGCCCAATCGACCAAGGACTCAATACAAGAGGCAGGTCAACAGATAAAGGCCAAGGCACAGGGTGCAGTCGATGCTGTCAAGGATGCCACTGGCATGAACAATAAATGA

Protein sequence

MADNSQQMSYHIGEAKGQAQEKASNVMDKASDVAQSTKDSIQEAGQQIKAKAQGAVDAVKDATGMNNK

Homology

[Close]

BLAST of Spg038633 vs. NCBI nr
Match: XP_008437025.1 (PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0043490.1 stress-induced protein KIN2-like [Cucumis melo var. makuwa])

HSP 1 Score: 109.8 bits (273), Expect = 9.6e-21
Identity = 57/66 (86.36%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 1  MADNSQQMSYHIGEAKGQAQEKASNVMDKASDVAQSTKDSIQEAGQQIKAKAQGAVDAVK 60
          MADNSQ+MSYH+GEAKGQAQEKASN+MDKASD AQS K+S+QEAGQQ+KAKAQGA DAVK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMN 67
          DATGMN
Sbjct: 61 DATGMN 66

[Close]

BLAST of Spg038633 vs. NCBI nr
Match: XP_022159706.1 (stress-induced protein KIN2-like [Momordica charantia])

HSP 1 Score: 109.8 bits (273), Expect = 9.6e-21
Identity = 57/66 (86.36%), Postives = 62/66 (93.94%), Query Frame = 0


Query: 1  MADNSQQMSYHIGEAKGQAQEKASNVMDKASDVAQSTKDSIQEAGQQIKAKAQGAVDAVK 60
          MADNSQ+MSYH GEAKGQAQEKASN+MDKASD AQS K+S+QEAGQQ+KAKAQGA DAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESVQEAGQQVKAKAQGAADAVK 60

Query: 61 DATGMN 67
          DATGMN
Sbjct: 61 DATGMN 66

[Close]

BLAST of Spg038633 vs. NCBI nr
Match: XP_022159694.1 (stress-induced protein KIN2-like [Momordica charantia])

HSP 1 Score: 107.5 bits (267), Expect = 4.7e-20
Identity = 56/66 (84.85%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 1  MADNSQQMSYHIGEAKGQAQEKASNVMDKASDVAQSTKDSIQEAGQQIKAKAQGAVDAVK 60
          MADNS++MSYH GEAKGQAQEKASN+MDKASD AQSTK+S+QEAGQQ+KAKAQGA+DAVK
Sbjct: 1  MADNSRKMSYHAGEAKGQAQEKASNMMDKASDAAQSTKESVQEAGQQMKAKAQGALDAVK 60

Query: 61 DATGMN 67
          DATG N
Sbjct: 61 DATGTN 66

[Close]

BLAST of Spg038633 vs. NCBI nr
Match: XP_022159716.1 (stress-induced protein KIN2-like [Momordica charantia])

HSP 1 Score: 107.5 bits (267), Expect = 4.7e-20
Identity = 56/66 (84.85%), Postives = 61/66 (92.42%), Query Frame = 0


Query: 1  MADNSQQMSYHIGEAKGQAQEKASNVMDKASDVAQSTKDSIQEAGQQIKAKAQGAVDAVK 60
          MADNSQ+MSYH GEAKGQAQEKASN+MDKASD AQS K+S+QEAGQQ+KAKAQG  DAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQVKAKAQGVADAVK 60

Query: 61 DATGMN 67
          DATGMN
Sbjct: 61 DATGMN 66

[Close]

BLAST of Spg038633 vs. NCBI nr
Match: XP_004152387.1 (stress-induced protein KIN2 [Cucumis sativus] >KGN50291.1 hypothetical protein Csa_000602 [Cucumis sativus])

HSP 1 Score: 107.5 bits (267), Expect = 4.7e-20
Identity = 56/66 (84.85%), Postives = 62/66 (93.94%), Query Frame = 0


Query: 1  MADNSQQMSYHIGEAKGQAQEKASNVMDKASDVAQSTKDSIQEAGQQIKAKAQGAVDAVK 60
          MADNS++MSYHIGEAKGQAQEKASN+MDKA D AQS K+S+QEAGQQ+KAKAQGA DAVK
Sbjct: 1  MADNSEKMSYHIGEAKGQAQEKASNLMDKAGDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMN 67
          DATGMN
Sbjct: 61 DATGMN 66

[Close]

BLAST of Spg038633 vs. ExPASy TrEMBL
Match: A0A5A7TJP0 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00300 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.6e-21
Identity = 57/66 (86.36%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 1  MADNSQQMSYHIGEAKGQAQEKASNVMDKASDVAQSTKDSIQEAGQQIKAKAQGAVDAVK 60
          MADNSQ+MSYH+GEAKGQAQEKASN+MDKASD AQS K+S+QEAGQQ+KAKAQGA DAVK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMN 67
          DATGMN
Sbjct: 61 DATGMN 66

[Close]

BLAST of Spg038633 vs. ExPASy TrEMBL
Match: A0A6J1E4Q8 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026049 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.6e-21
Identity = 57/66 (86.36%), Postives = 62/66 (93.94%), Query Frame = 0


Query: 1  MADNSQQMSYHIGEAKGQAQEKASNVMDKASDVAQSTKDSIQEAGQQIKAKAQGAVDAVK 60
          MADNSQ+MSYH GEAKGQAQEKASN+MDKASD AQS K+S+QEAGQQ+KAKAQGA DAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESVQEAGQQVKAKAQGAADAVK 60

Query: 61 DATGMN 67
          DATGMN
Sbjct: 61 DATGMN 66

[Close]

BLAST of Spg038633 vs. ExPASy TrEMBL
Match: A0A1S3ASP1 (stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103482578 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.6e-21
Identity = 57/66 (86.36%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 1  MADNSQQMSYHIGEAKGQAQEKASNVMDKASDVAQSTKDSIQEAGQQIKAKAQGAVDAVK 60
          MADNSQ+MSYH+GEAKGQAQEKASN+MDKASD AQS K+S+QEAGQQ+KAKAQGA DAVK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMN 67
          DATGMN
Sbjct: 61 DATGMN 66

[Close]

BLAST of Spg038633 vs. ExPASy TrEMBL
Match: A0A0A0KRE1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165860 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.3e-20
Identity = 56/66 (84.85%), Postives = 62/66 (93.94%), Query Frame = 0


Query: 1  MADNSQQMSYHIGEAKGQAQEKASNVMDKASDVAQSTKDSIQEAGQQIKAKAQGAVDAVK 60
          MADNS++MSYHIGEAKGQAQEKASN+MDKA D AQS K+S+QEAGQQ+KAKAQGA DAVK
Sbjct: 1  MADNSEKMSYHIGEAKGQAQEKASNLMDKAGDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMN 67
          DATGMN
Sbjct: 61 DATGMN 66

[Close]

BLAST of Spg038633 vs. ExPASy TrEMBL
Match: A0A6J1E333 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026035 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.3e-20
Identity = 56/66 (84.85%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 1  MADNSQQMSYHIGEAKGQAQEKASNVMDKASDVAQSTKDSIQEAGQQIKAKAQGAVDAVK 60
          MADNS++MSYH GEAKGQAQEKASN+MDKASD AQSTK+S+QEAGQQ+KAKAQGA+DAVK
Sbjct: 1  MADNSRKMSYHAGEAKGQAQEKASNMMDKASDAAQSTKESVQEAGQQMKAKAQGALDAVK 60

Query: 61 DATGMN 67
          DATG N
Sbjct: 61 DATGTN 66

[Close]

BLAST of Spg038633 vs. TAIR 10
Match: AT5G38760.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 83.2 bits (204), Expect = 8.9e-17
Identity = 43/66 (65.15%), Postives = 55/66 (83.33%), Query Frame = 0


Query: 1  MADNSQQMSYHIGEAKGQAQEKASNVMDKASDVAQSTKDSIQEAGQQIKAKAQGAVDAVK 60
          M+ NSQ +S+  G+AKGQ QEKAS +MDKAS+ AQS K+S++E GQQIK KAQGA ++VK
Sbjct: 1  MSSNSQNISFQAGQAKGQTQEKASTMMDKASNAAQSAKESLKETGQQIKEKAQGATESVK 60

Query: 61 DATGMN 67
          +ATGMN
Sbjct: 61 NATGMN 66

[Close]

BLAST of Spg038633 vs. TAIR 10
Match: AT5G53820.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 81.3 bits (199), Expect = 3.4e-16
Identity = 41/66 (62.12%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 1  MADNSQQMSYHIGEAKGQAQEKASNVMDKASDVAQSTKDSIQEAGQQIKAKAQGAVDAVK 60
          M++NSQ MS++ G+AKGQ QEKASN++DKAS+ AQS K+SIQE GQQ+K KAQGA + +K
Sbjct: 1  MSNNSQSMSFNAGQAKGQTQEKASNLIDKASNAAQSAKESIQEGGQQLKQKAQGASETIK 60

Query: 61 DATGMN 67
          + TG++
Sbjct: 61 EKTGIS 66

[Close]

BLAST of Spg038633 vs. TAIR 10
Match: AT3G02480.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 75.5 bits (184), Expect = 1.9e-14
Identity = 39/64 (60.94%), Postives = 46/64 (71.88%), Query Frame = 0


Query: 3  DNSQQMSYHIGEAKGQAQEKASNVMDKASDVAQSTKDSIQEAGQQIKAKAQGAVDAVKDA 62
          DN Q  SY  G+A GQ +EKA  +MDKA D A S +DS+Q+ GQQ+K KAQGA D VKD 
Sbjct: 2  DNKQNASYQAGQATGQTKEKAGGMMDKAKDAAASAQDSLQQTGQQMKEKAQGAADVVKDK 61

Query: 63 TGMN 67
          TGMN
Sbjct: 62 TGMN 65

The following BLAST results are available for this feature:

BLAST of Spg038633 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437025.1	9.6e-21	86.36	PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0043490.1 stress-...	[more]
XP_022159706.1	9.6e-21	86.36	stress-induced protein KIN2-like [Momordica charantia]	[more]
XP_022159694.1	4.7e-20	84.85	stress-induced protein KIN2-like [Momordica charantia]	[more]
XP_022159716.1	4.7e-20	84.85	stress-induced protein KIN2-like [Momordica charantia]	[more]
XP_004152387.1	4.7e-20	84.85	stress-induced protein KIN2 [Cucumis sativus] >KGN50291.1 hypothetical protein C...	[more]

BLAST of Spg038633 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg038633 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TJP0	4.6e-21	86.36	Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A6J1E4Q8	4.6e-21	86.36	stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026049 ...	[more]
A0A1S3ASP1	4.6e-21	86.36	stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103482578 PE=4 SV...	[more]
A0A0A0KRE1	2.3e-20	84.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165860 PE=4 SV=1	[more]
A0A6J1E333	2.3e-20	84.85	stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026035 ...	[more]

BLAST of Spg038633 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38760.1	8.9e-17	65.15	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G53820.1	3.4e-16	62.12	Late embryogenesis abundant protein (LEA) family protein	[more]
AT3G02480.1	1.9e-14	60.94	Late embryogenesis abundant protein (LEA) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.120.20	Apolipoprotein	coord: 2..66 e-value: 4.2E-6 score: 28.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..68
None	No IPR available	PANTHER	PTHR34191:SF15	BNAA01G32930D PROTEIN	coord: 1..67
IPR039624	Stress-induced protein KIN1/KIN2	PANTHER	PTHR34191	LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN	coord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg038633.1	Spg038633.1	mRNA