Spg038607 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg038607
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	THO complex subunit 4D-like
Location	scaffold12: 2359744 .. 2372731 (+)
RNA-Seq Expression	Spg038607
Synteny	Spg038607

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAATTTAGGGTTCAATTCAATGAATTGGAAAATGGATATAATTTATCAAGTTCAAGGGTATTTTTTCCCCAAAATATTAAATATGGGGAAGGGCAATTTAGATATTTCACTTGTAATCGTAGGTCAAGTAGTCAAGAGGTTATATTTATAAAATCAGGAAGATAGGATCAAATTTCAATAATTTATCCGTTTAAAAAAAAAATAAAAATTCAATAATTTATCAAAAAACGCAATTTGTGAGGAAACAAAGGAAAGAAGAAAAAAAGGTTCGATGAAAAAAATATCGTCGTCTTAGTCCCGAAGGAAAAGTCTCTCTCAGGCCGCCGCCGCCGCAGCCGCAGCCGCCGCCTCTCGCCTGAAGAATCTCTGTTTCTCTCGTACAAGCCCTAAAAATCCCACACGCACGTACCGCTTTCCGTCATCATCCCTTCGGAAATCCTCTCCTTGATCTTGTTGAAATCTTTATCTTCTCTCTCTCTTTCTCCCTCGGAAGTTCGACCGACCGTTTCTAGGGATCATCTTCAGGTAACTTTTATTCCTCGCTTTCCGTTTTTTTTGAACTTCATTTACGTGGATTTGTTATGGCGTTATACTGTTCGATAATTTGTCAATCGGAGTCTTGAATGGGGATGTTTTTGTTTCCTGAGAAGACGTTTATACGAATATGAATGATGTTGTGTGATTATAGATCTTGAAAGTGTTGAAGTCGAGTGAGAATGTGATTTCTTGTTTCCTGCATAAAATGTTTCGTTACTATTTATCGTTCTATGTGCTCTTTTTTGGCTTTTGGGTTTTAGATATTATTTTAACAAGTGGTGGTGAATATAGATATTATTTTAGCTCTTGGATGCTTATTTTCTTTCGTATGCTCATATTTCCTGCTTTTGGGTTTTAGATCTGAAATCGGAAGTTAACTGGACTCAGGACCGTCTTATTATAATCTGACTACTTATGGGCGTGGATATTGGAGTTGGAATAATCATTGACTGGCGTTTTTTGAAAAAAATGTTATTATTACTGTTTTTATAATATGTTTACGATTATACGTTTTGTTTGTATTACTTCCAAAGTTCAAATTATCGGAAGGCTACAGGACGATCTTACACAAAACGTAACGAAGAAACGATAATTACATTATTTCATTCTCCTACCTTTTATCATCGAGACTATATTATTATTTTTTAATTATAAAATCATAATTATGGTCCATGTAAAAGAACCTTAAAGCTCATGGTGGAGTTTAGATGGAAAAGAAAGAGACTTACAAACTTAGGATGGGGTTGTTTAGCATGATAACATACAAAAACAACACAATGATTGAATTATTTAATTCTTTCAATAACAAAGAGCCCACAACATGGTAAAAACAGTCTTCATGATCTCATAATCACAATTTATAGATCCAAGCAATAACTGAATATGACTTCTTCCATTTTTCTCCATTATTGTACTTATATTTCCTCTACTTTAGCTCATTTTCATAGTCCTGATCTATAAGGGTGAATGAAGATGAGGCTTTATTTATTGTCTTTGATATAATCATTATGTTTTGTAATCCTTGACTATGCATTTTTATGAATGTCTTATTTAAATTCAGGCTTATGCCTCAAATTGTCTCAATGTTTATTCATGGCCTTATTATTAATTTTACCTTTACTAGTGTTATGAAGCTCATTTGCACTTCTATTTGCATTTTTATGTAGTTCTATCTTCTTCTGGTCTGATCCATGTGTTAAGTTAAATACATAATAATCTAGAACGTATTTTTGGTTGGTGGGGTATGTTAAAATTAGCTTACCTCAAATTGTTATAGAAATATCTATTTTGGCACTTCAGAGTCTTGGTTGGGCTGTGGTGGGGTGTGTGTTTTTGTTGAAGATGGATGTTGAGTAGGATGAGCAGGTCAATTTGAATACATATTACAGCTGACACATTAAATGAAGTATTGATTTATTAAGTTTCATGCAAGTAATAGTATCAATGTATCATAATGTGTAAATTTTATCTTACCTTTCTGCAGGACTCCCTTTTTATAATTCTTTGAAATCTATTTCTTCTTATCAAACCGATGGCTACTCCTTTAGATATGTCACTTGAGGATGTGATAAAGAAGAATAACCGTGAGAAGCTTAGAGCACGAGGTAGGGCCCGTCGTGGGCGTGGAGCAGGTGGGTCTTTTAATGGTGGAAGAGGAGTAGTGATAGGGTCAGTTCGTAGAGGTCCTCTCAGCATAAATGCACGCCCATCTGCTTACTCAATTAGCAAGGCAAGCTTCAAACTGTGATGTTTAATGCATATGCTTGAGAACCTGATATTCATTGAAAATACATGCTCATGGGGATCTCAAATAACACTATAGTAACTCTAACAGAAGAGGATCAGTAGAATTGTTGTTCCATGGAGAACCTCATTGTGGCTCACCCTCTTATCCGAATCGTCTTCTGGTGTATTTGTACCATTATCTTTGCAAATATTGAATACGTGTGGGTTATCTGGGTTATTTTCAAAGGACTTTCAAGAGTGGAGAATTATATTCTTGTCGATTTATAAGCTGATATGTGTTTTCCCCGTCTGGATTCTTATCTGCATGCTTTCATCAGCCTCCACGCAGAATGAAGAATGTTCAATGGCAGCATGATTTATTTGAAGATAGTCTTAGAGCTTCAGGGATTTCTGGAATTGAAATTGGCACAAAGTTGTACGTTTCCAACTTGGATTATGGGGTGACCAAAGAAGATATAAGGGTACAACTCAAGCCATATATATTTGACTAAAGATGCTTTCTCTTCATTTTTGATTAATATTCTCTTGGAACCTGACGGTGAACTCAGGAGTTGTTCTCTGAGATTGGAGACCTGAAAAGATTTGCAATTCATTATGACAAAAATGGCCGTCCAAGTGTGAGTTCCTACTTGTCTTGTAAAAATGTGCAGTAATGTGTTGCTGTTTGGCTTTCTCTGGAATCAAGTATTAATATTGTTTTGGTAGCCAGAACTGTGTGACTATTTAATCAATATTTTCTTTTGGTGGATTTGGCTTTACTTCAGAAGATGGAGAGTGCTGGAAAAAACTATTACAACGAACTTGTTACTAGAATACATGTAATTTACGCCTGGAACTTTTAGTTAATAAATTATGTGTGTATATATATATATATAGCATGTTTTTATATATCAAATATATAATTTCTCTTCAATGATCAAATTTAAAATTTCTCTTCAATGATCAAATTTAAAATTTCTCTTCAATGATCTATTATTTTATTTCACGAAGAAAATTGGACTTCAAAGTACTTGATTGTTTATTAGTAATATTTGGTGCGAAAAACTCAGTCCATGAATTAAAGTATGGATGAAAGCAATCTTATTTTAAGTAAAAAATATGTTGTATTTTTAATTAACTTGTACTGGTTAGGGTCAGCGCAATTAATTTTTAAAAGAAGTTTGAACCTAGTTAGTTTCAATTCATTTCAATCTAGATATCTCAAAAATCTTGTTAATCCAATCCAACCCATTAAGGTTTTTAGGGTTGAGCTTTTTCCCCTTCCTTAAGGACTTCAACCTATCTGCAAACAAGTGCAATGTAAGAGATTGTGGTTTCATATGTGGTGGTGCCATGGCCTCATTCTTTAGTGCGTATTGTTCCTTGACCGTGTGTTCTAATTCTTGCTCTTCTTGCTTGTCTTTGCTTATCATTGTTATTCATATTTTGTTTCTTTTAAGTTAGCATGCGATTTATAAGCACACATGATAATTATTGTACTCCTGTTTTAAATGCGTTCTTAATGGTTAGCCCAATCAAGCTTTAGTTGGCTGATAAACTTTCCATTGTTTATTAAAGGGCTCGGCAGAGGTGGTATATACTCGTAGAAGTGATGCATTTGCTGCTCTGAAGCGTTATAACAATGTGTTACTGGATGGGAAGCCAATGAAGATTGAAATGCTTGGTGATAATGCTGAAATACCGGTTTCTGCACGTATAAATGTTACTGGAGTGAATGGAAGAAGCAGGAGGACAGTTGTTCTAACGTATGTAGTATTCTAGTTACTTTTCTCTCTTCCTTTTTGTCCTTTTTCTTATTTAATTTTAACATCTTTATAACTAATTATTGTGCCCCTGGGGGATAGAAAGCTACTGTACATTGTTCTATTTCTTGATCATTTTTATCCGGCTACTTTTAAGTTGCTTCTTATTCTCTAAAGGGAAATTGTCATTGCCTAATTCCCAATGGTTAAATGGCCGGGATTTCAGGCCAATTAGTCATATCAGTAGTGTTTGTAAAAATTTTTCAAGGGTGCTTCTAGATTGGCTGAAGAAGGTTCTCCCTTTAACAATTCTCCAAATTTGCTTTCATCGATAAACTTGCCAGATTAACAGACTCCGTTTTTATAGCCAATGAAATAGCTGATGCTGATAAGGAGCAAAACTCAAGGATAAATCTTGAAGGTTCGACATGGAAGAGACCTGTGAGCTTAGTTAGTTAGGACTTCAATTCAAAGACTTTGAGAAGAAAGGTTCTGAGCCAAATGAGCTAGGTGGATGCTTGATTGTTTCACCTATATCTGATTTTCTATCTTTATCAATGCGAGGCCTATAGGATGGTTTAAAGTTTCAAAATTCTTCAATAAGGCGACTCTCTATCTGTGTAGTATTAGAATAAATTCCAAGATGTAGTGATGGGATTCCATAAATCAGCAATAAGAGCCTCCTTTTTCAGTGAGAGATGATATAGCGCAGGGTAATTTGTTTGGAGATTAGATGCTCCTATCCGAACATCCTTCCAAAACAGTGTTTTATTTCCTTTTCCAACAATAGAGTTTGTATGACTGTAAACAAGCTGCTGTAATTTATCTATAAATTTCCATGGGCCTTTTACCTGGTTTCTGATTATAGTGAGTTGCTCCATATTTAGAAGCAATAATTTTCCTCCAAAGAGCATCTTTTTCTTTGTAGATTCGCCAAACCCATTTTTCCTGGAGGGACACGTTTTTCTTATGCAAATTATAAATACCCAATCCTCTCCTTCCTCAATCGGAGCAACTTTTCAATAGCCTTTGTAACCTTATTAGGAGCCGCTAACGCGAGCATAGTTTAACTGGTAAAAACTTGTATTAATAACCAACCAAGAGGTTTGTGGTTCAAATCCCCCTACTCATTTTTTTTTTTTTTGAGAGAACACCAACTTTCATTGAGAAAAAAATGAAAGAATACAAGGGCATTAAAAAAAAAGCCCACAAAAGGGAACCCCACTAAAGAAAGAGGCTCCAATCAAGGTAAAATAAGACCTATTGAATAGTTACAAAATGCCTTTGAAACCGAAGCCCAAGCCCAGAGAGAAACATTATATCTAATGAGGGCTGAAACCTCAGATGGGGGCATCTCTACACCTCTAAAAGTCCTATTATTCCTCTCTCCCCATAAACCCCATAAAACAACACACACCCCGACAAGCCAAAGCTCCCTCCCTTTGTCTCTAAAAGGCAGATGGTGGAGGAACTCCTCGATCATCTCTCTTAGAACTCTGAAACTCCTGCCCTGCACCCAAAAGCCTCAAAGAACAAACTCCAGATTGTGTGAGCAAAGATACAACTCCACAATAAAGGATCCAAATCTTCCTCCGCCTTTCGACATAGAATGCAATAGAACGGACCCACCAACAAAGGCATCTTTCTTGTGAGATTATTGAAGGTATTAACTCTTCCATGAATAACTTGCCAGGTAAAGAATCTAACATTCTTAGGAATTTTTACCCCCATAGAATAAAGAAGGAACTACATGAGAAGCCCTTAGAAGGGCTAAGACTCCACCTACGAATATCCCTCCCCCTCCCTAAACTGAAGCTCTCCAATCAAGGCAAGAGAGCTACAACCTCCACTACTTCCCTATCGACCAAAGAACATTGGAAACCCAAAGAATAAGAAAGAGAGCCCCCGAGAACCATGATAATCTAAAAATCATCTTGTTTTTCATGGTGGACGTGGACAATCGATAGAGATTAGAAAACTTGGAGCAGAGGGAACTATCTCCCACCCACTTGTCCTCCCAAAAATAAATATCCCTCCCATCTCCCACAATACAATGAACTAGACTCGAAAAAATCGGGGGCTTCCATGGATTCCTGGCCATGCCTGTGAGCCCATCCATCAACCACTGATAGGGATGATAGCCGTACTTACTAACAATTATTTGATGCCATAAGGAAGTTGATGTTAGGCCTCCAATTATCTTGCAATATGCTCGAAGGGGTAAAAAGGGAAATGCAGACCCAACATTCCCTGCAGAATCGGTTTAGAAGTTGGTGCGCAATGGGAGGGGACCAGCTATGCCTTTATTTCCGTTATGCTTTTGTCATATAAATAGTCTCTTTTGTAATAGTCGTTTTTAGGTTTTACTTTGGTAAATAGCTGAAAGCTATAGGAGAAAGGAGAGATTATCGGCCCTCTCGAATTGGCCGGGAGCTTTTGTAATCGTTTAGCTCTCTCTGATTATCAATACAACTTGTGAGGATACCTCACAACTTGGTATCAGAGCACGTTCACCCTGGGAAGACTAGGCAAAATGGCACAGAAAAGGATCGAGGAAAGACTGGATGTAACGGACACTGAGCTGGAAGGAATGAAGAAGGAAATGCAGAAGTTACCTGCGATCGAGAGGAACTTAGCGAAGCTTTCGCAAACTTCTGAGGAAACGGTCAAGGCTCTGGCGGCGATTGCGAGCGAGATGGTTCACTGGCGAACCAAATCTCCTTCCTCCGGCGTCACAGAGGCATCGGGTTCGAAAGGGAAGGAAAAAGAGAGTGACACACAAAATGAGTTGAGCAACCTGAATGAGGACGCACCTCCTTCAGCTACGAGTGGAAGTGTGAAGAAAGAACCTATCGGAGGAACCGGTAGCGAACGCCTTAAGTTTAGAAAGGTGGAGATGCCAGTGTTTGGAGGCGATGACCCGGATTCGTGGCTCTTCAGAGCGGACAGGTACTTTCAATTATATCAGGTTACTGACCATGAAAAACTTGTTGTTGCAGTAGTGAGTTTAGAGGGCGAGGCTCTCAACTGGTACAAGATAATTGGAGGCCTAACATCACCATCGAGGCTCTCAACTGGAACAAGTCGTTAGCAATGACTCCGGCAGGTTTACTTCAGCCGTTAGAGGTACCTACCAGGATTTGGGAACATATCACGATGGATTTCATAGAGGGACTACCACGCTCTGAAGGCTGTGATGCGATATTAGTAGTGGTGGACCGCTTAAGTAAGTATGGTCATTTCTTAGCTTTGAAACACCCGTTCACCGCCAAAACTGTAGCAGCCAAGTTCATTCAAGAAATTGTGCGCCTACACGGGTATCCGGGCTCGATAATCTCAGACAGGGACAAAATTTTCATCAGTCACTTTTGGACTGAACTCTTTCGGATGCAAGGAACTAAGTTGAAGCGTAGCACCTCTTATCATCCGCAAACGGATGGACAGACCGAAGCGGTAAACAAATGTGTAGAGCATTTCCTAAGGTGCTTTTGTGGGGAGAGACCTAGGAAGTGGTTCCAGTGGATAGGTTGGGCTGAATACTGGTACAACACCACATTCCATATATCCATTGGAATCACTCCCTTCCAGGCGGTTTATGGAAGACCACCACCGCCCCTCATCTCCTACGGCGAACAGGTAACAACCAATTCCACCTTGGAACAGCAGTTGGTGGAAAGAGATGTGGCCCTGGGAGTTATAAGGGAAAATATGCGCCTTGCACAAGAAAGAATGAAGAAATTTGCTGATAAACACAGAAGAGAAGTGGAATTCGAGGCAGGCGACATGGTATTTCTTAAACTTCGGCCTTATAGACAGACATCCTTGGCCAACCGCCGGAACGAGAAGCTGTCTCCTAAATACTTCGGGCCCTACGAGATAGAAGAACGAATTGGGAAGGTTGCCTACCGTCTGAAACTGCCACCAACGTCCAGTGTGCACCCAGTGTTCCATGTATCTCAGCTCAAGAAGATGTTGGGGAACAATAATGTTGTGCAACCAATTCCACCTCCAATAACTGAGAATTTTGAGTGGCAGGCAGAACCAGACGACATTTATGCTTGTAGAAAGAACCAGGACAGTGGGGAAACAGAGTTGTTAGTTAGCTGGAAGCATCTACCGGAACATGAAGCGACTTGGGTGCTTTTATCAGCTTTTCGAGAAAAATTTCCCACTTACCACCTTGAGGACAAGGTGTCTTTGACCCCCGATGGTGATGTTAGGCCTCCAATTATCTTGCAATATGCTCGAAGGGGTAAAAAGGGAAATGCAGACCCAACATTCCCTGCAGAATCGGTTTAGAAGTTGGTGTGCAATGGGAGGGGACCAGCTATGCCTTTATTTCCGTTATGCTTTTATCATATAAATAGTCTCTTTTGTAATAGTCGTTTTTAGGTTTTACTTTGGTAAATAGCTGAAAGCTATAGGAGAAAGGAGAGATTACCGGCCCTCTCGAATTGGCCGGGAGCTTTTGTAATCGTTTAGCTCTTTCTCTGATTATCAATACAACTTGTGAGGATACCTCACAGTTGACTCAAGTGGGAACCGCCATAGCCATTTAACTAGCAGAGCTCTATTTCTCAAATTCAGATTCCCTAATTCTAGACCACCAAGACCCAACAAGTTTGCTCACCGTCTCCCATCTAAGTGCCCCCCCCCCCCCCCCCATGTTGTAACCTTATTAGGAGCAAGAAATAATGAGAAATAAATTGGAAAATTAGCGAGGGTAGCTTGTATACGAGTGTCTTCCACCTTTAGATATGTGTGACGCCCCCAATTATATAAATGTTGCTCCACTTTTTCAATAATCGGAATCCAAAAGTTTGAAGATTGAGGATTGCTCTTTAGAGGGAGACCCAAAATGTAGTTGACCAAGATCCAAGCTTACATCCAAAGGAGGATGCGAGAATCGAAGCTTGTTGTGTGCTGATTCCAATGACCAAAAATTCAGTTTTGAGGCAATTAATATTTAATCCCGATGCTTCCTCAAAAGAGTGGATAGTTTTGAAGAGATTATCAAGCAAGGTTTCATTGGGGTAGGAAAACAGTATAGTATCATTGATAAACTGAAGGTGCGTAAAGGATAAGGATGGTGAGGCCACTCCAACCTAGAAACCTTCGATGAGGCATGGTTGTTCTGTTAGTATAAATGTCCTACTTAAGCAATCAACCACAAAGATGAATAGGAAAGGAGGGAGGGGATCGCCTTAACGAAGACCTTTAGAAGCATGAAGTTTCCTCGTAGGTTTACCATTAATGATGGTGAAATAATCTGCAGAAGAGAGGCAACCTCTAATCCATTTTCTCCATATTTGCCTGAACCCCTTTGTTAGAAGAATCTCGTCAAGAAAATCCCAATCGACCATATCAAAAGCCTTTTCAATGTCAAGTTTGATGACAACCTCTTTCTTTTTCTTATGATTCCATTCATCAATTATCTCATTGACAATGAGTGATGCATCAAGGATTTGGCAATTGACAGTAAGTTCTTTAAACACATTACTTACATTGTTCTCCCTTGGTGTAAATCTTACCTGCTGTTTAGTTCCTATAGTCTCACTCCTCTTATTGCTCAATGGAAGCGTTTTTTTTTTTAAATAAAAAAATTTAATTTCTTTGACATTATTTGCCTTCTTTTTTAATCATCTTATCAAGAAAGGAATCGGAATCGATGTTTCTCATAGAAAAAAAGACAGACGAAAAGAAAGTAAAGAAGTTTGGGAATATGAACTCTTTGGATACTCACAGATATATAACAAAAGAGACGCTTTTCATTGATAGATGAAAAGAAAGAAAGAAGTTTAGGAATACAAACCCCCGATGGGAGTGAAAGAACAAACAACTGAACCAATAAAGTACAAATCTCCCAAAATTACAACTGCCAAAATAAAACATTGAAGAACAAAGTATACCTAAGGGAGAAGAAAACATGCAAAATAATCCCAGAAGTAAAGCCTTCGATTTGAAAAGCCACAGAAGCCAAAACACAATCCATCCAAATGCAAAACCAGCATCAAAACTGACCACCCAAAGCTCTGGAAAAGAGATCCATGAAGACTTTGGTGAGAGAGATTGTTTCAAATTCCTTCGAAGCTACTGAACAGCACGGTGAATCATTTAAAACAAACCCCTATTCCGATAAGGGACCTGTTGCATGCTTGAAAAATTTGGAAGTCCTTTGGATCTTCGAACATGTGCTCAGCACCGAAGAAAGATGAAAAAGCCTTATTTCGCTTGGATCTTTGGGAAGGCCTCTAGAAGAATTTCAGCTTCTGAATTGAAGCTGCTCACACTAATTGGATCGTCGCTAAAATCAAAACTCCTCTAATTCACCTCTAAAAACAACTTCATCAGTTTAATTACTAGTACCTTGAGAAAAGGGGTGGATCTCTTTTGAGAACTCCTTTAACAGCCCAATAGATTTTGAAATACCCTTAGATGAACTCAATCAACCAAACCCAGGAGAAGGGTAGCCATCTTTTTTGAATTGTTTTCTTCGGCTGTAGATGAGAGGGAAAGGCTCCATTGAGATCACCTTGGACATAATACTAATTTGACATGTATTTCCAAGATTTAGTGTTCATCGGAGTAACTTAACCTGTAGTTTGTTATAATATAATCTCTACCTGCTATCTCAGACTGGAAGAGTCTGATAGGTTGGTTATGTTATTTCGATGTTTAACTTAACCTATAGTTTGTTATAAACGCCCTTTTCATCTAAATAGTATTTTCAGTTCCATTCTATGTAAAATCACTAAAAAGAAGTTCCATTTCGAGTAGCTTTCTAAAAATCCACTTCGAATGTAATGTAACTATACTAGACACGCAAATTCTTCCAGAACTGGTCTAAACTAGCATCGGCAGATTGCAGTCAAGTTACTTCTTAAAATGTGACTATCTTCTCAAGATTCGTTTTTGTGCAAACTGTGTCCCCCTTTCTTTTACGTGCTCTCCTTTAAAAATCGTGTTTCTTGAAATGATTGATGAATACAAAATAAAATTTCCTACAGATGTTGAGTAATATTAATATTTGTTGGGTATATGCAGGTCTGAATCTGGTCGTACCGGTAACTCCAACGCGGTCAACCCTTTTCCTGGGTAAGTTCAATAGTGGAGTAACTGGGTTTTATTATTTCTATAATTATTATATTTTGGCATTGTTTTACTGCATTCTAGTTGGATTGGTTTTGGAAGTCATTTGTTCCTAGTATTGTTATCTCTGGTTTTCTTAGGGATGTTGCAATTAAGAGTTGAAATTTTTTTAACCTGTTTGGAGGTCAGGCTAATGAATCGTTTTCCCTCTATAGTTCTTTTATAAAAATATCTTTTATGTAAAAAATTATTTGGTAAGATAATATTTAAACATTTCTTAGAATAAAAAAGAAAAAGCGGAAAACAGATGATGGTAGTGCATGTCCAATGTTTTCGTGTGTTTTAAAAGTTTTCTAAATTAACTGTTTATATAATGCCTTCTAATACGGAGAAGAAAGTCATGAAAACACGAACGAAAATATATATATATATATTTGTAGTTTTTATAATTTCAAATAATAAGAAACAGTTTTAAAATATTAGTTTTGATGGGATTTTGTGCCTTAGTGGCAGTATGGCCGCACCCAGCAATTTTAAAATATTAGTTATTTCAATTCAAAAGGGAGGGAAGGAGTTCTAAAAGAATAGTTTCTAAATTCATATGAGCATTAAGGTATATACTCTTAACCATGAGGTCAAAGATTTAAATCTCCACCCCACGTTTGCAAAATATTTTTCAAATAAATGTTTTTCTAGGTGTGGTCATGAATGCGATTTGCTTCATAGTTTCTTTGTTTTTTTTTGACAACATGTGGAGTGGAGGAATTCGAATCATTGATCTCTTGGTCATCAGTACAAGCTTTATGCCGGTTGAGCTTTGCTCATGTTGGCAGCGATTTGCTTCATAGTTATGAGATGGGGTTGTAGGTTTAAATCTTTGTCCATATTTATGATGTCATATATATTTTCAAAAAAAGGAAGTGATATTGTCTGCATGGTGTTCATTTGATAAGAGTCTAAAAATGCACGTCAGGAGTTGGAAATAGAGCAAGATGAGTTAACTTTGGTTAAATTGGTAAAAGTAAAACAAGTTTTTGTAGCAGTATGGTCTTATTGAAGTTTTTGGAATCTGTACAGTCCAAGCCATCGTGGAGGGCTGAGGAATGGCCGTGGCCGTGGGCGAGGAGGCTGGAGTCGTGGTCTAGGAGGTCTAGGTGGAGGAGGCCGGGGCCGAGGGCGTGGTCGTGGTCGTGGCCGTGGTCAGGGCCAGGGAAGAAAGAAACCCGTGGAGAAGTCCTCAGATGAACTTGACAAGGAGCTTGAAAACTATCATGCAGAAGCCATGCAAACCTGAGGAACCTTGGAATATGCAAAAACAGAAGTACAATTATATGTTAGCTGTAAGATTATATGTTACATTCTCGGGCTGATTATTTTGTTATCATTAGTAGTTTCCATGTTTCCCTTTTCCTCTTCAGTAGACTAGATTGTATTTCCTGTTAATGGAAAATGATGCTGTTTGATGACCCTCTGTTATCGAAACTTCTACCTTTCCGGTCGATCCTGAACGAACCAAGTGTGAGGCTCAATGTCTACAAGCCTCACAAACTCATGCCCGGTGATCCATTGCTTTCTCAAATAGGTAAATTGCTTTTTGTATAAAGGGTTTCATGTCTAGTTGGTTATACAATGTTGAAAATGGGGAGTACCTTGTATTTATGGGACCTATTCTTCAACACGCTGTTGTTCTAGTACTCGATATCTTCCATTGGCCCCCGAGAATCTCTAAGTCGTACTGTCAATTTCTCTTGCTCTTCTTTCCTCGATCTTGACTCTGATCGTTTTCTTATCTCCACCCTAAAAATGTCTTCAACTTGTGTTTGATCAATCTAAATTAAAAGGTGATTGAATGGGTAAAGGTAAGATTTTGGCC

mRNA sequence

ATGGCTACTCCTTTAGATATGTCACTTGAGGATGTGATAAAGAAGAATAACCGTGAGAAGCTTAGAGCACGAGGTAGGGCCCGTCGTGGGCGTGGAGCAGGTGGGTCTTTTAATGGTGGAAGAGGAGTAGTGATAGGGTCAGTTCGTAGAGGTCCTCTCAGCATAAATGCACGCCCATCTGCTTACTCAATTAGCAAGCCTCCACGCAGAATGAAGAATGTTCAATGGCAGCATGATTTATTTGAAGATAGTCTTAGAGCTTCAGGGATTTCTGGAATTGAAATTGGCACAAAGTTGTACGTTTCCAACTTGGATTATGGGGTGACCAAAGAAGATATAAGGGAGTTGTTCTCTGAGATTGGAGACCTGAAAAGATTTGCAATTCATTATGACAAAAATGGCCGTCCAAGTGGCTCGGCAGAGGTGGTATATACTCGTAGAAGTGATGCATTTGCTGCTCTGAAGCGTTATAACAATGTGTTACTGGATGGGAAGCCAATGAAGATTGAAATGCTTGGTGATAATGCTGAAATACCGGTTTCTGCACGTATAAATGTTACTGGAGTGAATGGAAGAAGCAGGAGGACAGTTGTTCTAACATTAACAGACTCCGTTTTTATAGCCAATGAAATAGCTGATGCTGATAAGGAGCAAAACTCAAGGATAAATCTTGAAGGTTCGACATGGAAGAGACCTAGCACGTTCACCCTGGGAAGACTAGGCAAAATGGCACAGAAAAGGATCGAGGAAAGACTGGATGTAACGGACACTGAGCTGGAAGGAATGAAGAAGGAAATGCAGAAGTTACCTGCGATCGAGAGGAACTTAGCGAAGCTTTCGCAAACTTCTGAGGAAACGGTCAAGGCTCTGGCGGCGATTGCGAGCGAGATGGTTCACTGGCGAACCAAATCTCCTTCCTCCGGCGTCACAGAGGCATCGGGTTCGAAAGGGAAGGAAAAAGAGAGTGACACACAAAATGAGTCTGAATCTGGTCGTACCGGTAACTCCAACGCGGTCAACCCTTTTCCTGGTCCAAGCCATCGTGGAGGGCTGAGGAATGGCCGTGGCCGTGGGCGAGGAGGCTGGAGTCGTGGTCTAGGAGGTCTAGGTGGAGGAGGCCGGGGCCGAGGGCGTGGTCGTGGTCGTGGCCGTGGTCAGGGCCAGGGAAGAAAGAAACCCGTGGAGAAGTCCTCAGATGAACTTGACAAGGAGCTTGAAAACTATCATGCAGAAGCCATGCAAACCTGA

Coding sequence (CDS)

ATGGCTACTCCTTTAGATATGTCACTTGAGGATGTGATAAAGAAGAATAACCGTGAGAAGCTTAGAGCACGAGGTAGGGCCCGTCGTGGGCGTGGAGCAGGTGGGTCTTTTAATGGTGGAAGAGGAGTAGTGATAGGGTCAGTTCGTAGAGGTCCTCTCAGCATAAATGCACGCCCATCTGCTTACTCAATTAGCAAGCCTCCACGCAGAATGAAGAATGTTCAATGGCAGCATGATTTATTTGAAGATAGTCTTAGAGCTTCAGGGATTTCTGGAATTGAAATTGGCACAAAGTTGTACGTTTCCAACTTGGATTATGGGGTGACCAAAGAAGATATAAGGGAGTTGTTCTCTGAGATTGGAGACCTGAAAAGATTTGCAATTCATTATGACAAAAATGGCCGTCCAAGTGGCTCGGCAGAGGTGGTATATACTCGTAGAAGTGATGCATTTGCTGCTCTGAAGCGTTATAACAATGTGTTACTGGATGGGAAGCCAATGAAGATTGAAATGCTTGGTGATAATGCTGAAATACCGGTTTCTGCACGTATAAATGTTACTGGAGTGAATGGAAGAAGCAGGAGGACAGTTGTTCTAACATTAACAGACTCCGTTTTTATAGCCAATGAAATAGCTGATGCTGATAAGGAGCAAAACTCAAGGATAAATCTTGAAGGTTCGACATGGAAGAGACCTAGCACGTTCACCCTGGGAAGACTAGGCAAAATGGCACAGAAAAGGATCGAGGAAAGACTGGATGTAACGGACACTGAGCTGGAAGGAATGAAGAAGGAAATGCAGAAGTTACCTGCGATCGAGAGGAACTTAGCGAAGCTTTCGCAAACTTCTGAGGAAACGGTCAAGGCTCTGGCGGCGATTGCGAGCGAGATGGTTCACTGGCGAACCAAATCTCCTTCCTCCGGCGTCACAGAGGCATCGGGTTCGAAAGGGAAGGAAAAAGAGAGTGACACACAAAATGAGTCTGAATCTGGTCGTACCGGTAACTCCAACGCGGTCAACCCTTTTCCTGGTCCAAGCCATCGTGGAGGGCTGAGGAATGGCCGTGGCCGTGGGCGAGGAGGCTGGAGTCGTGGTCTAGGAGGTCTAGGTGGAGGAGGCCGGGGCCGAGGGCGTGGTCGTGGTCGTGGCCGTGGTCAGGGCCAGGGAAGAAAGAAACCCGTGGAGAAGTCCTCAGATGAACTTGACAAGGAGCTTGAAAACTATCATGCAGAAGCCATGCAAACCTGA

Protein sequence

MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSFNGGRGVVIGSVRRGPLSINARPSAYSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEIGDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNAEIPVSARINVTGVNGRSRRTVVLTLTDSVFIANEIADADKEQNSRINLEGSTWKRPSTFTLGRLGKMAQKRIEERLDVTDTELEGMKKEMQKLPAIERNLAKLSQTSEETVKALAAIASEMVHWRTKSPSSGVTEASGSKGKEKESDTQNESESGRTGNSNAVNPFPGPSHRGGLRNGRGRGRGGWSRGLGGLGGGGRGRGRGRGRGRGQGQGRKKPVEKSSDELDKELENYHAEAMQT

Homology

[Close]

BLAST of Spg038607 vs. NCBI nr
Match: XP_023527122.1 (THO complex subunit 4D [Cucurbita pepo subsp. pepo])

HSP 1 Score: 458.8 bits (1179), Expect = 5.1e-125
Identity = 276/422 (65.40%), Postives = 282/422 (66.82%), Query Frame = 0


Query: 1   MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSFNGGRGVVIGSVRRGPLSINARPS 60
           MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGS+NGGR VVIGSVRRGPL INARPS
Sbjct: 1   MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSYNGGRAVVIGSVRRGPLGINARPS 60

Query: 61  AYSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120
           A+SISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI
Sbjct: 61  AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120

Query: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNAEIPV 180
           GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNA+ PV
Sbjct: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNADTPV 180

Query: 181 SARINVTGVNGRSRRTVVLTLTDSVFIANEIADADKEQNSRINLEGSTWKRPSTFTLGRL 240
           SARINVTGVNGRSRRTVVLT                                        
Sbjct: 181 SARINVTGVNGRSRRTVVLT---------------------------------------- 240

Query: 241 GKMAQKRIEERLDVTDTELEGMKKEMQKLPAIERNLAKLSQTSEETVKALAAIASEMVHW 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 295

Query: 301 RTKSPSSGVTEASGSKGKEKESDTQNESESGRTGNSNAVNPFPGPSHRGGLRN--GRGRG 360
                                      SESGRTG+SNAVNPFPGPSHRGGLR+  GRGRG
Sbjct: 301 ---------------------------SESGRTGSSNAVNPFPGPSHRGGLRSGRGRGRG 295

Query: 361 RGGWSRGLG-----GLGGGGRGRGRGRGRGRGQGQGRKKPVEKSSDELDKELENYHAEAM 416
           RGGWSRGLG     GLGGGGRGRGRG G GRG+GQGRKKPVEKSS ELDKELENYHAEAM
Sbjct: 361 RGGWSRGLGGGGGRGLGGGGRGRGRGSGSGRGRGQGRKKPVEKSSAELDKELENYHAEAM 295

[Close]

BLAST of Spg038607 vs. NCBI nr
Match: XP_022935328.1 (THO complex subunit 4D-like [Cucurbita moschata] >XP_022935329.1 THO complex subunit 4D-like [Cucurbita moschata] >XP_022935330.1 THO complex subunit 4D-like [Cucurbita moschata])

HSP 1 Score: 456.8 bits (1174), Expect = 1.9e-124
Identity = 275/422 (65.17%), Postives = 282/422 (66.82%), Query Frame = 0


Query: 1   MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSFNGGRGVVIGSVRRGPLSINARPS 60
           MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGS+NGGR VVIGSVRRGPL INARPS
Sbjct: 1   MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSYNGGRAVVIGSVRRGPLGINARPS 60

Query: 61  AYSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120
           A+SISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI
Sbjct: 61  AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120

Query: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNAEIPV 180
           GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNA+ PV
Sbjct: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNADTPV 180

Query: 181 SARINVTGVNGRSRRTVVLTLTDSVFIANEIADADKEQNSRINLEGSTWKRPSTFTLGRL 240
           SARINVTGVNGRSRRTVVLT                                        
Sbjct: 181 SARINVTGVNGRSRRTVVLT---------------------------------------- 240

Query: 241 GKMAQKRIEERLDVTDTELEGMKKEMQKLPAIERNLAKLSQTSEETVKALAAIASEMVHW 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 295

Query: 301 RTKSPSSGVTEASGSKGKEKESDTQNESESGRTGNSNAVNPFPGPSHRGGLRN--GRGRG 360
                                      SESGRTG+S+AVNPFPGPSHRGGLR+  GRGRG
Sbjct: 301 ---------------------------SESGRTGSSHAVNPFPGPSHRGGLRSGRGRGRG 295

Query: 361 RGGWSRGLG-----GLGGGGRGRGRGRGRGRGQGQGRKKPVEKSSDELDKELENYHAEAM 416
           RGGWSRGLG     GLGGGGRGRGRG G GRG+GQGRKKPVEKSS ELDKELENYHAEAM
Sbjct: 361 RGGWSRGLGGGGGRGLGGGGRGRGRGSGSGRGRGQGRKKPVEKSSAELDKELENYHAEAM 295

[Close]

BLAST of Spg038607 vs. NCBI nr
Match: XP_022982649.1 (THO complex subunit 4D-like [Cucurbita maxima] >XP_022982650.1 THO complex subunit 4D-like [Cucurbita maxima] >XP_022982651.1 THO complex subunit 4D-like [Cucurbita maxima])

HSP 1 Score: 454.1 bits (1167), Expect = 1.3e-123
Identity = 276/432 (63.89%), Postives = 282/432 (65.28%), Query Frame = 0


Query: 1   MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSFNGGRGVVIGSVRRGPLSINARPS 60
           MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGS+NGGR VVIGSVRRGPL INARPS
Sbjct: 1   MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSYNGGRAVVIGSVRRGPLGINARPS 60

Query: 61  AYSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120
           A+SISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI
Sbjct: 61  AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120

Query: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNAEIPV 180
           GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNA+ PV
Sbjct: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNADTPV 180

Query: 181 SARINVTGVNGRSRRTVVLTLTDSVFIANEIADADKEQNSRINLEGSTWKRPSTFTLGRL 240
           SARINVTGVNGRSRRTVVLT                                        
Sbjct: 181 SARINVTGVNGRSRRTVVLT---------------------------------------- 240

Query: 241 GKMAQKRIEERLDVTDTELEGMKKEMQKLPAIERNLAKLSQTSEETVKALAAIASEMVHW 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 300

Query: 301 RTKSPSSGVTEASGSKGKEKESDTQNESESGRTGNSNAVNPFPGPSHRGGLRNGRGRGRG 360
                                      SESGRTG+SNAVNPFPGPSHRGGLR+GRGRGRG
Sbjct: 301 ---------------------------SESGRTGSSNAVNPFPGPSHRGGLRSGRGRGRG 305

Query: 361 GWSRGLGGLGG-----------GGRGRGRGR------GRGRGQGQGRKKPVEKSSDELDK 416
           GWSRGLGG GG           GGRGRGRGR      G GRG+GQGRKKPVEKSS ELDK
Sbjct: 361 GWSRGLGGGGGRGLGGGGGRGLGGRGRGRGRGSGSGSGSGRGRGQGRKKPVEKSSAELDK 305

[Close]

BLAST of Spg038607 vs. NCBI nr
Match: XP_038896761.1 (THO complex subunit 4D-like [Benincasa hispida])

HSP 1 Score: 451.1 bits (1159), Expect = 1.1e-122
Identity = 268/415 (64.58%), Postives = 276/415 (66.51%), Query Frame = 0


Query: 1   MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSFNGGRGVVIGSVRRGPLSINARPS 60
           MATPLDMSLEDVIKK+NREKLRARGRARRGRGAGGSFNGGRGVV+GSVRRGPL INAR S
Sbjct: 1   MATPLDMSLEDVIKKSNREKLRARGRARRGRGAGGSFNGGRGVVVGSVRRGPLGINARAS 60

Query: 61  AYSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120
           AYSI KPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGV+KEDIRELFSEI
Sbjct: 61  AYSIRKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVSKEDIRELFSEI 120

Query: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNAEIPV 180
           GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDG+PMKIEMLGDNAE+PV
Sbjct: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGRPMKIEMLGDNAEMPV 180

Query: 181 SARINVTGVNGRSRRTVVLTLTDSVFIANEIADADKEQNSRINLEGSTWKRPSTFTLGRL 240
           SARINVTGVNGRSRRTVVLT                                        
Sbjct: 181 SARINVTGVNGRSRRTVVLT---------------------------------------- 240

Query: 241 GKMAQKRIEERLDVTDTELEGMKKEMQKLPAIERNLAKLSQTSEETVKALAAIASEMVHW 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 285

Query: 301 RTKSPSSGVTEASGSKGKEKESDTQNESESGRTGNSNAVNPFPGPSHRGGLRNGRGRGRG 360
                                       ESGRT +SN VNPFPGPSHRGGLRNGRGRGRG
Sbjct: 301 ---------------------------PESGRTASSNVVNPFPGPSHRGGLRNGRGRGRG 285

Query: 361 GWSRGLGGLGGGGRGRGRGRGRGRGQGQGRKKPVEKSSDELDKELENYHAEAMQT 416
           GW+RG G  GGGG   GRGRGRGRG+GQGRKKPVEKSSDELDKELENYHAEAMQT
Sbjct: 361 GWNRGQGVGGGGG---GRGRGRGRGRGQGRKKPVEKSSDELDKELENYHAEAMQT 285

[Close]

BLAST of Spg038607 vs. NCBI nr
Match: KAG6581189.1 (THO complex subunit 4C, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 447.2 bits (1149), Expect = 1.5e-121
Identity = 275/438 (62.79%), Postives = 282/438 (64.38%), Query Frame = 0


Query: 1   MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSFNGGRGVVIGSVRRGPLSINARPS 60
           MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGS+NGG+ VVIGSVRRGPL INARPS
Sbjct: 1   MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSYNGGKAVVIGSVRRGPLGINARPS 60

Query: 61  AYSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120
           A+SISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI
Sbjct: 61  AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120

Query: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNAEIPV 180
           GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNA+ PV
Sbjct: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNADTPV 180

Query: 181 SARINVTGVNGRSRRTVVLTLTDSVFIANEIADADKEQNSRINLEGSTWKRPSTFTLGRL 240
           SARINVTGVNGRSRRTVVLT                                        
Sbjct: 181 SARINVTGVNGRSRRTVVLT---------------------------------------- 240

Query: 241 GKMAQKRIEERLDVTDTELEGMKKEMQKLPAIERNLAKLSQTSEETVKALAAIASEMVHW 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 300

Query: 301 RTKSPSSGVTEASGSKGKEKESDTQNESESGRTGNSNAVNPFPGPSHRGGLRN--GRGRG 360
                                      SESGRTG+SNAVNPFPGPSHRGGLR+  GRGRG
Sbjct: 301 ---------------------------SESGRTGSSNAVNPFPGPSHRGGLRSGRGRGRG 311

Query: 361 RGGWSRGLG-------------GLGGGGRGRGR--------GRGRGRGQGQGRKKPVEKS 416
           RGGWSRGLG             GLGGGGRGRGR        G G GRG+GQGRKKPVEKS
Sbjct: 361 RGGWSRGLGGGGGRGLGGGGGRGLGGGGRGRGRGSGSGSGSGSGSGRGRGQGRKKPVEKS 311

[Close]

BLAST of Spg038607 vs. ExPASy Swiss-Prot
Match: Q6NQ72 (THO complex subunit 4D OS=Arabidopsis thaliana OX=3702 GN=ALY4 PE=1 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.3e-59
Identity = 170/420 (40.48%), Postives = 224/420 (53.33%), Query Frame = 0


Query: 1   MATPLDMSLEDVIKKNNREKLRARGRAR-RGRGAGGSFNGGRGVVIGSVRRGPLSINARP 60
           M+  L+M+L++++K+    +   RG +R RGRG GG   GGRG   G  RRGPL++NARP
Sbjct: 1   MSGALNMTLDEIVKRGKTARSGGRGISRGRGRGRGG---GGRGA--GPARRGPLAVNARP 60

Query: 61  SAYSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSE 120
           S+++I+KP RR++++ WQ  LFED LRA+G SG+E+GT+L+V+NLD GVT EDIRELFSE
Sbjct: 61  SSFTINKPVRRVRSLPWQSGLFEDGLRAAGASGVEVGTRLHVTNLDQGVTNEDIRELFSE 120

Query: 121 IGDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDN--AE 180
           IG+++R+AIHYDKNGRPSG+AEVVY RRSDAF ALK+YNNVLLDG+PM++E+LG N  +E
Sbjct: 121 IGEVERYAIHYDKNGRPSGTAEVVYPRRSDAFQALKKYNNVLLDGRPMRLEILGGNNSSE 180

Query: 181 IPVSAR--INVTGVNGRSRRTVVLTLTDSVFIANEIADADKEQNSRINLEGSTWKRPSTF 240
            P+S R  +NVTG+NGR +RTVV                                     
Sbjct: 181 APLSGRVNVNVTGLNGRLKRTVV------------------------------------- 240

Query: 241 TLGRLGKMAQKRIEERLDVTDTELEGMKKEMQKLPAIERNLAKLSQTSEETVKALAAIAS 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 287

Query: 301 EMVHWRTKSPSSGVTEASGSKGKEKESDTQNESESGRTGNSNAVNPFPGPSHRGGLRNGR 360
                        + +  G +G+ +          GR G      P P  S R  + N +
Sbjct: 301 -------------IQQGGGGRGRVR---------GGRGGR----GPAPTVSRRLPIHNQQ 287

Query: 361 GRGRGGWSRGLGGLGGGGRGRGRGRGRGRGQGQGRKKPVEKSSDELDKELENYHAEAMQT 416
           G   GG   G GG    GRG G GRGRG G+G G KKPVEKS+ +LDK+LE+YHA+AM T
Sbjct: 361 G---GGMRGGRGGFRARGRGNG-GRGRGGGRGNG-KKPVEKSAADLDKDLESYHADAMNT 287

[Close]

BLAST of Spg038607 vs. ExPASy Swiss-Prot
Match: Q94EH8 (THO complex subunit 4C OS=Arabidopsis thaliana OX=3702 GN=ALY3 PE=1 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.7e-54
Identity = 166/426 (38.97%), Postives = 222/426 (52.11%), Query Frame = 0


Query: 1   MATPLDMSLEDVIKKNNREKLRA-----RGRARR-GRGAGGS---FNGGRGVVIGSVRRG 60
           M+  L+M+L++++KK+  E+  A     +G +R+ GRG GG      GGRG   G VRRG
Sbjct: 1   MSDALNMTLDEIVKKSKSERSAAARSGGKGVSRKSGRGRGGPNGVVGGGRGG--GPVRRG 60

Query: 61  PLSINARP-SAYSISKPPRRMKNVQW--QHDLFEDSLRASGISGIEIGTKLYVSNLDYGV 120
           PL++N RP S++SI+K  RR +++ W  Q+DL+E++LRA G+SG+E+GT +Y++NLD GV
Sbjct: 61  PLAVNTRPSSSFSINKLARRKRSLPWQNQNDLYEETLRAVGVSGVEVGTTVYITNLDQGV 120

Query: 121 TKEDIRELFSEIGDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMK 180
           T EDIREL++EIG+LKR+AIHYDKNGRPSGSAEVVY RRSDA  A+++YNNVLLDG+PMK
Sbjct: 121 TNEDIRELYAEIGELKRYAIHYDKNGRPSGSAEVVYMRRSDAIQAMRKYNNVLLDGRPMK 180

Query: 181 IEMLGDNAE-IPVSARINVTGVNGRSRRTVVLTLTDSVFIANEIADADKEQNSRINLEGS 240
           +E+LG N E  PV+AR+NVTG+NGR +R        SVFI   +                
Sbjct: 181 LEILGGNTESAPVAARVNVTGLNGRMKR--------SVFIGQGVRG-------------- 240

Query: 241 TWKRPSTFTLGRLGKMAQKRIEERLDVTDTELEGMKKEMQKLPAIERNLAKLSQTSEETV 300
                     GR+G+                                             
Sbjct: 241 ----------GRVGR--------------------------------------------- 292

Query: 301 KALAAIASEMVHWRTKSPSSGVTEASGSKGKEKESDTQNESESGRTGNSNAVNPFPGPSH 360
                                    SG  G+      QN+                    
Sbjct: 301 ----------------------GRGSGPSGRRLPLQ-QNQ-------------------- 292

Query: 361 RGGLRNGRGRGRGGWSRGLGGLGGGGRGRGRGRGRGRGQGQGRKKPVEKSSDELDKELEN 414
                      +GG + G GG  G GRG G GRG   G G+G KKPVEKS+ +LDK+LE+
Sbjct: 361 -----------QGGVTAGRGGFRGRGRGNGGGRGNKSG-GRGGKKPVEKSAADLDKDLES 292

[Close]

BLAST of Spg038607 vs. ExPASy Swiss-Prot
Match: Q8L719 (THO complex subunit 4B OS=Arabidopsis thaliana OX=3702 GN=ALY2 PE=1 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 4.0e-40
Identity = 95/191 (49.74%), Postives = 124/191 (64.92%), Query Frame = 0


Query: 1   MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSFNGGRGVVIGSVRRGPLSINARPS 60
           M+  LDMSL+D+I K+NR+   +RGR   G G      GG G   G  RR    + AR +
Sbjct: 1   MSGGLDMSLDDII-KSNRKPTGSRGRGGIGGGNNTGGRGGSGSNSGPSRRFANRVGARTA 60

Query: 61  AYSISKPPRRMKNVQWQHDLF--EDSLRAS----------GISGIEIGTKLYVSNLDYGV 120
            YS     ++  +  WQ+D+F  + S+ A+          G S IE GTKLY+SNLDYGV
Sbjct: 61  PYSRPIQQQQAHDAMWQNDVFATDASVAAAFGHHQTAVVGGGSSIETGTKLYISNLDYGV 120

Query: 121 TKEDIRELFSEIGDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMK 180
           + EDI+ELFSE+GDLKR+ IHYD++GR  G+AEVV++RR DA AA+KRYNNV LDGK MK
Sbjct: 121 SNEDIKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFSRRGDALAAVKRYNNVQLDGKLMK 180

HSP 2 Score: 27.7 bits (60), Expect = 3.8e+02
Identity = 44/91 (48.35%), Postives = 53/91 (58.24%), Query Frame = 0


Query: 330 SGRTGNSNAVNPFPGPSHRGGLRNGRGRGRGGW---SRGLGGLGGGGRGRGRG-RGR-GR 389
           +G  GN N    F G  +     N RGRGRGG+    RG GG GGG    GRG RGR GR
Sbjct: 205 NGILGNFN--ENFNGNFNGNFNGNFRGRGRGGFMGRPRG-GGFGGGNFRGGRGARGRGGR 264

Query: 390 GQGQGRKKPVEKSSDELDKELENYHAEAMQT 416
           G G GR +    S+++LD EL+ YH EAM+T
Sbjct: 265 GSG-GRGRDENVSAEDLDAELDKYHKEAMET 291

[Close]

BLAST of Spg038607 vs. ExPASy Swiss-Prot
Match: Q8L773 (THO complex subunit 4A OS=Arabidopsis thaliana OX=3702 GN=ALY1 PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.4e-37
Identity = 87/181 (48.07%), Postives = 116/181 (64.09%), Query Frame = 0


Query: 1   MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSFNGGRGVVIGSVRRGPLSINARPS 60
           M+T LDMSL+D+I KN     ++RG A   RG G     G      + R  P   + R +
Sbjct: 1   MSTGLDMSLDDMIAKNR----KSRGGAGPARGTGSGSGPG-----PTRRNNPNRKSTRSA 60

Query: 61  AYSISKPPRRMKNVQWQHDLF----EDSLRASGISGIEIGTKLYVSNLDYGVTKEDIREL 120
            Y  +K P       W HD+F    ED       +GIE GTKLY+SNLDYGV  EDI+EL
Sbjct: 61  PYQSAKAPES----TWGHDMFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNEDIKEL 120

Query: 121 FSEIGDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNA 178
           F+E+G+LKR+ +H+D++GR  G+AEVVY+RR DA AA+K+YN+V LDGKPMKIE++G N 
Sbjct: 121 FAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIVGTNL 168

HSP 2 Score: 23.9 bits (50), Expect = 5.5e+03
Identity = 52/149 (34.90%), Postives = 71/149 (47.65%), Query Frame = 0


Query: 285 ETVKALAAIASEM----VHWRTKSPSSGVTEASGSK------GKEKESDTQNESESGR-- 344
           E +K L A   E+    VH+     S G  E   S+        +K +D Q + +  +  
Sbjct: 102 EDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIE 161

Query: 345 -TGNSNAVNPFPGPSHRGGLRNGR----GRGRGGWSRGLGGLGGGGRGRGRGRGRGRGQG 404
             G +      P      G  NG     G+GRGG  RG GG GGGGRG   G GRGR  G
Sbjct: 162 IVGTNLQTAAAPSGRPANGNSNGAPWRGGQGRGGQQRG-GGRGGGGRG---GGGRGRRPG 221

Query: 405 QGRKKPVEK-SSDELDKELENYHAEAMQT 416
           +G   P EK S+++LD +L+ YH+  M+T
Sbjct: 222 KG---PAEKISAEDLDADLDKYHSGDMET 243

[Close]

BLAST of Spg038607 vs. ExPASy Swiss-Prot
Match: B5FXN8 (THO complex subunit 4 OS=Taeniopygia guttata OX=59729 GN=ALYREF PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 9.0e-32
Identity = 83/185 (44.86%), Postives = 118/185 (63.78%), Query Frame = 0


Query: 1   MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSFNG---GRGVVIGS------VRRG 60
           MA  +DMSL+D+IK N  ++  +RG  R GRG GG+  G   GRG V G       VR  
Sbjct: 1   MADKMDMSLDDIIKLNRSQRGASRG-GRGGRGRGGTARGGGPGRGGVGGGRAGGGPVRNR 60

Query: 61  PLSINA----RPSAYSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYG 120
           P+        RP+ YS    P+++   +WQHDLF+    A   +G+E G KL VSNLD+G
Sbjct: 61  PVMARGGGRNRPAPYS---RPKQLPE-KWQHDLFDSGFGAG--AGVETGGKLLVSNLDFG 120

Query: 121 VTKEDIRELFSEIGDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPM 173
           V+  DI+ELF+E G LK+ A+HYD++GR  G+A+V + R++DA  A+K+YN V LDG+PM
Sbjct: 121 VSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPM 178

HSP 2 Score: 28.5 bits (62), Expect = 2.2e+02
Identity = 30/63 (47.62%), Postives = 39/63 (61.90%), Query Frame = 0


Query: 352 RNGRGRGRGGWSRG---LGGLGGGGRGRG-RGRGRGRGQGQGRKKPVEKSSDELDKELEN 411
           R  +   RGG +R    LGG GGGG  RG RG  RGRG+G GR    + S++ELD +L+ 
Sbjct: 187 RPAQSVNRGGMTRNRGVLGGFGGGGNRRGTRGGNRGRGRGAGRTSKQQLSAEELDAQLDA 246

[Close]

BLAST of Spg038607 vs. ExPASy TrEMBL
Match: A0A6J1FAB9 (THO complex subunit 4D-like OS=Cucurbita moschata OX=3662 GN=LOC111442248 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 9.4e-125
Identity = 275/422 (65.17%), Postives = 282/422 (66.82%), Query Frame = 0


Query: 1   MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSFNGGRGVVIGSVRRGPLSINARPS 60
           MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGS+NGGR VVIGSVRRGPL INARPS
Sbjct: 1   MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSYNGGRAVVIGSVRRGPLGINARPS 60

Query: 61  AYSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120
           A+SISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI
Sbjct: 61  AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120

Query: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNAEIPV 180
           GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNA+ PV
Sbjct: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNADTPV 180

Query: 181 SARINVTGVNGRSRRTVVLTLTDSVFIANEIADADKEQNSRINLEGSTWKRPSTFTLGRL 240
           SARINVTGVNGRSRRTVVLT                                        
Sbjct: 181 SARINVTGVNGRSRRTVVLT---------------------------------------- 240

Query: 241 GKMAQKRIEERLDVTDTELEGMKKEMQKLPAIERNLAKLSQTSEETVKALAAIASEMVHW 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 295

Query: 301 RTKSPSSGVTEASGSKGKEKESDTQNESESGRTGNSNAVNPFPGPSHRGGLRN--GRGRG 360
                                      SESGRTG+S+AVNPFPGPSHRGGLR+  GRGRG
Sbjct: 301 ---------------------------SESGRTGSSHAVNPFPGPSHRGGLRSGRGRGRG 295

Query: 361 RGGWSRGLG-----GLGGGGRGRGRGRGRGRGQGQGRKKPVEKSSDELDKELENYHAEAM 416
           RGGWSRGLG     GLGGGGRGRGRG G GRG+GQGRKKPVEKSS ELDKELENYHAEAM
Sbjct: 361 RGGWSRGLGGGGGRGLGGGGRGRGRGSGSGRGRGQGRKKPVEKSSAELDKELENYHAEAM 295

[Close]

BLAST of Spg038607 vs. ExPASy TrEMBL
Match: A0A6J1J564 (THO complex subunit 4D-like OS=Cucurbita maxima OX=3661 GN=LOC111481464 PE=4 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 6.1e-124
Identity = 276/432 (63.89%), Postives = 282/432 (65.28%), Query Frame = 0


Query: 1   MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSFNGGRGVVIGSVRRGPLSINARPS 60
           MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGS+NGGR VVIGSVRRGPL INARPS
Sbjct: 1   MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSYNGGRAVVIGSVRRGPLGINARPS 60

Query: 61  AYSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120
           A+SISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI
Sbjct: 61  AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120

Query: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNAEIPV 180
           GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNA+ PV
Sbjct: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNADTPV 180

Query: 181 SARINVTGVNGRSRRTVVLTLTDSVFIANEIADADKEQNSRINLEGSTWKRPSTFTLGRL 240
           SARINVTGVNGRSRRTVVLT                                        
Sbjct: 181 SARINVTGVNGRSRRTVVLT---------------------------------------- 240

Query: 241 GKMAQKRIEERLDVTDTELEGMKKEMQKLPAIERNLAKLSQTSEETVKALAAIASEMVHW 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 300

Query: 301 RTKSPSSGVTEASGSKGKEKESDTQNESESGRTGNSNAVNPFPGPSHRGGLRNGRGRGRG 360
                                      SESGRTG+SNAVNPFPGPSHRGGLR+GRGRGRG
Sbjct: 301 ---------------------------SESGRTGSSNAVNPFPGPSHRGGLRSGRGRGRG 305

Query: 361 GWSRGLGGLGG-----------GGRGRGRGR------GRGRGQGQGRKKPVEKSSDELDK 416
           GWSRGLGG GG           GGRGRGRGR      G GRG+GQGRKKPVEKSS ELDK
Sbjct: 361 GWSRGLGGGGGRGLGGGGGRGLGGRGRGRGRGSGSGSGSGRGRGQGRKKPVEKSSAELDK 305

[Close]

BLAST of Spg038607 vs. ExPASy TrEMBL
Match: A0A1S3C452 (THO complex subunit 4D OS=Cucumis melo OX=3656 GN=LOC103496802 PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 1.6e-119
Identity = 264/415 (63.61%), Postives = 269/415 (64.82%), Query Frame = 0


Query: 1   MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSFNGGRGVVIGSVRRGPLSINARPS 60
           M TPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSFNGGRGVVIGSVRRGPL INAR S
Sbjct: 1   MTTPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSFNGGRGVVIGSVRRGPLGINARAS 60

Query: 61  AYSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120
           AYSI KPP RMKNVQWQHDLFEDSLRASGISGI+IGTKLYVSNLDYGVTKEDIRELFSEI
Sbjct: 61  AYSIRKPPHRMKNVQWQHDLFEDSLRASGISGIQIGTKLYVSNLDYGVTKEDIRELFSEI 120

Query: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNAEIPV 180
           GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNAE+PV
Sbjct: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNAEMPV 180

Query: 181 SARINVTGVNGRSRRTVVLTLTDSVFIANEIADADKEQNSRINLEGSTWKRPSTFTLGRL 240
           SARINVTG NGR+RRTVVLT                                        
Sbjct: 181 SARINVTGTNGRNRRTVVLT---------------------------------------- 240

Query: 241 GKMAQKRIEERLDVTDTELEGMKKEMQKLPAIERNLAKLSQTSEETVKALAAIASEMVHW 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 285

Query: 301 RTKSPSSGVTEASGSKGKEKESDTQNESESGRTGNSNAVNPFPGPSHRGGLRNGRGRGRG 360
                                       ESGR    N VNPFPGPSHRGGLRN RGRGRG
Sbjct: 301 ---------------------------PESGRNATFNVVNPFPGPSHRGGLRNARGRGRG 285

Query: 361 GWSRGLGGLGGGGRGRGRGRGRGRGQGQGRKKPVEKSSDELDKELENYHAEAMQT 416
            W+RG+ GLGG G GRGRGRGRGR  GQGRKKPVEKSSDELDKELENYHAEAMQT
Sbjct: 361 AWTRGV-GLGGSGGGRGRGRGRGR--GQGRKKPVEKSSDELDKELENYHAEAMQT 285

[Close]

BLAST of Spg038607 vs. ExPASy TrEMBL
Match: A0A6J1CP51 (THO complex subunit 4D-like OS=Momordica charantia OX=3673 GN=LOC111013262 PE=4 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 1.0e-115
Identity = 260/415 (62.65%), Postives = 271/415 (65.30%), Query Frame = 0


Query: 1   MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSFNGGRGVVIGSVRRGPLSINARPS 60
           MATPLDMSLED+IKKNNREKLRARGRARRGRGAGGSFNGGR VVIGS+RRGPLSIN RPS
Sbjct: 1   MATPLDMSLEDMIKKNNREKLRARGRARRGRGAGGSFNGGR-VVIGSIRRGPLSINTRPS 60

Query: 61  AYSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120
           A+SISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI
Sbjct: 61  AFSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120

Query: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNAEIPV 180
           GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIE+LGDNAE+PV
Sbjct: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEILGDNAEMPV 180

Query: 181 SARINVTGVNGRSRRTVVLTLTDSVFIANEIADADKEQNSRINLEGSTWKRPSTFTLGRL 240
           SARINVTG+NGRSRRTVVLT                                        
Sbjct: 181 SARINVTGLNGRSRRTVVLT---------------------------------------- 240

Query: 241 GKMAQKRIEERLDVTDTELEGMKKEMQKLPAIERNLAKLSQTSEETVKALAAIASEMVHW 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 281

Query: 301 RTKSPSSGVTEASGSKGKEKESDTQNESESGRTGNSNAVNPFPGPSHRGGLRNGRGRGRG 360
                                      SESGRT +S  VN FPGPS+RG LR GRGRGRG
Sbjct: 301 ---------------------------SESGRTDSSTVVNHFPGPSNRGALR-GRGRGRG 281

Query: 361 GWSRGLGGLGGGGRGRGRGRGRGRGQGQGRKKPVEKSSDELDKELENYHAEAMQT 416
           GWSRG G +GG     GRGRGRGRG+G GRKK VEKSSDELDK+LENYHAEAMQT
Sbjct: 361 GWSRGQGQVGG-----GRGRGRGRGRGLGRKKTVEKSSDELDKDLENYHAEAMQT 281

[Close]

BLAST of Spg038607 vs. ExPASy TrEMBL
Match: A0A0A0L717 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G302100 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 3.6e-100
Identity = 189/200 (94.50%), Postives = 194/200 (97.00%), Query Frame = 0


Query: 1   MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSFNGGRGVVIGSVRRGPLSINARPS 60
           M TPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSFNGGRGVVIGSVRRGPL INAR S
Sbjct: 1   MTTPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSFNGGRGVVIGSVRRGPLGINARAS 60

Query: 61  AYSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEI 120
           AYSI KPP RMKNVQWQHDLFEDSLRASGISGI+IGTKLYVSNLDYGVTKEDI+ELFSEI
Sbjct: 61  AYSIRKPPHRMKNVQWQHDLFEDSLRASGISGIQIGTKLYVSNLDYGVTKEDIKELFSEI 120

Query: 121 GDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNAEIPV 180
           GD+KRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNAE+PV
Sbjct: 121 GDVKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNAEMPV 180

Query: 181 SARINVTGVNGRSRRTVVLT 201
           SARINVTG NGR+RRTVVLT
Sbjct: 181 SARINVTGTNGRNRRTVVLT 200

[Close]

BLAST of Spg038607 vs. TAIR 10
Match: AT5G37720.2 (ALWAYS EARLY 4 )

HSP 1 Score: 233.8 bits (595), Expect = 2.5e-61
Identity = 168/420 (40.00%), Postives = 221/420 (52.62%), Query Frame = 0


Query: 1   MATPLDMSLEDVIKKNNREKLRARGRAR-RGRGAGGSFNGGRGVVIGSVRRGPLSINARP 60
           M+  L+M+L++++K+    +   RG +R RGRG GG   GGRG   G  RRGPL++NARP
Sbjct: 1   MSGALNMTLDEIVKRGKTARSGGRGISRGRGRGRGG---GGRGA--GPARRGPLAVNARP 60

Query: 61  SAYSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSE 120
           S+++I+KP RR++++ WQ  LFED LRA+G SG+E+GT+L+V+NLD GVT EDIRELFSE
Sbjct: 61  SSFTINKPVRRVRSLPWQSGLFEDGLRAAGASGVEVGTRLHVTNLDQGVTNEDIRELFSE 120

Query: 121 IGDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDN--AE 180
           IG+++R+AIHYDKNGRPSG+AEVVY RRSDAF ALK+YNNVLLDG+PM++E+LG N  +E
Sbjct: 121 IGEVERYAIHYDKNGRPSGTAEVVYPRRSDAFQALKKYNNVLLDGRPMRLEILGGNNSSE 180

Query: 181 IPVSAR--INVTGVNGRSRRTVVLTLTDSVFIANEIADADKEQNSRINLEGSTWKRPSTF 240
            P+S R  +NVTG+NGR +RTVV                       I + G         
Sbjct: 181 APLSGRVNVNVTGLNGRLKRTVV-----------------------IQVRG--------- 240

Query: 241 TLGRLGKMAQKRIEERLDVTDTELEGMKKEMQKLPAIERNLAKLSQTSEETVKALAAIAS 300
             GR G+     +  RL + + +                                     
Sbjct: 241 --GRGGRGPAPTVSRRLPIHNQQ------------------------------------- 279

Query: 301 EMVHWRTKSPSSGVTEASGSKGKEKESDTQNESESGRTGNSNAVNPFPGPSHRGGLRNGR 360
                                                                GG+R GR
Sbjct: 301 ----------------------------------------------------GGGMRGGR 279

Query: 361 GRGRGGWSRGLGGLGGGGRGRGRGRGRGRGQGQGRKKPVEKSSDELDKELENYHAEAMQT 416
           G  R        G G GGRGRG GRG G       KKPVEKS+ +LDK+LE+YHA+AM T
Sbjct: 361 GGFRA------RGRGNGGRGRGGGRGNG-------KKPVEKSAADLDKDLESYHADAMNT 279

[Close]

BLAST of Spg038607 vs. TAIR 10
Match: AT5G37720.1 (ALWAYS EARLY 4 )

HSP 1 Score: 231.1 bits (588), Expect = 1.6e-60
Identity = 170/420 (40.48%), Postives = 224/420 (53.33%), Query Frame = 0


Query: 1   MATPLDMSLEDVIKKNNREKLRARGRAR-RGRGAGGSFNGGRGVVIGSVRRGPLSINARP 60
           M+  L+M+L++++K+    +   RG +R RGRG GG   GGRG   G  RRGPL++NARP
Sbjct: 1   MSGALNMTLDEIVKRGKTARSGGRGISRGRGRGRGG---GGRGA--GPARRGPLAVNARP 60

Query: 61  SAYSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSE 120
           S+++I+KP RR++++ WQ  LFED LRA+G SG+E+GT+L+V+NLD GVT EDIRELFSE
Sbjct: 61  SSFTINKPVRRVRSLPWQSGLFEDGLRAAGASGVEVGTRLHVTNLDQGVTNEDIRELFSE 120

Query: 121 IGDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDN--AE 180
           IG+++R+AIHYDKNGRPSG+AEVVY RRSDAF ALK+YNNVLLDG+PM++E+LG N  +E
Sbjct: 121 IGEVERYAIHYDKNGRPSGTAEVVYPRRSDAFQALKKYNNVLLDGRPMRLEILGGNNSSE 180

Query: 181 IPVSAR--INVTGVNGRSRRTVVLTLTDSVFIANEIADADKEQNSRINLEGSTWKRPSTF 240
            P+S R  +NVTG+NGR +RTVV                                     
Sbjct: 181 APLSGRVNVNVTGLNGRLKRTVV------------------------------------- 240

Query: 241 TLGRLGKMAQKRIEERLDVTDTELEGMKKEMQKLPAIERNLAKLSQTSEETVKALAAIAS 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 287

Query: 301 EMVHWRTKSPSSGVTEASGSKGKEKESDTQNESESGRTGNSNAVNPFPGPSHRGGLRNGR 360
                        + +  G +G+ +          GR G      P P  S R  + N +
Sbjct: 301 -------------IQQGGGGRGRVR---------GGRGGR----GPAPTVSRRLPIHNQQ 287

Query: 361 GRGRGGWSRGLGGLGGGGRGRGRGRGRGRGQGQGRKKPVEKSSDELDKELENYHAEAMQT 416
           G   GG   G GG    GRG G GRGRG G+G G KKPVEKS+ +LDK+LE+YHA+AM T
Sbjct: 361 G---GGMRGGRGGFRARGRGNG-GRGRGGGRGNG-KKPVEKSAADLDKDLESYHADAMNT 287

[Close]

BLAST of Spg038607 vs. TAIR 10
Match: AT1G66260.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 214.9 bits (546), Expect = 1.2e-55
Identity = 166/426 (38.97%), Postives = 222/426 (52.11%), Query Frame = 0


Query: 1   MATPLDMSLEDVIKKNNREKLRA-----RGRARR-GRGAGGS---FNGGRGVVIGSVRRG 60
           M+  L+M+L++++KK+  E+  A     +G +R+ GRG GG      GGRG   G VRRG
Sbjct: 1   MSDALNMTLDEIVKKSKSERSAAARSGGKGVSRKSGRGRGGPNGVVGGGRGG--GPVRRG 60

Query: 61  PLSINARP-SAYSISKPPRRMKNVQW--QHDLFEDSLRASGISGIEIGTKLYVSNLDYGV 120
           PL++N RP S++SI+K  RR +++ W  Q+DL+E++LRA G+SG+E+GT +Y++NLD GV
Sbjct: 61  PLAVNTRPSSSFSINKLARRKRSLPWQNQNDLYEETLRAVGVSGVEVGTTVYITNLDQGV 120

Query: 121 TKEDIRELFSEIGDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMK 180
           T EDIREL++EIG+LKR+AIHYDKNGRPSGSAEVVY RRSDA  A+++YNNVLLDG+PMK
Sbjct: 121 TNEDIRELYAEIGELKRYAIHYDKNGRPSGSAEVVYMRRSDAIQAMRKYNNVLLDGRPMK 180

Query: 181 IEMLGDNAE-IPVSARINVTGVNGRSRRTVVLTLTDSVFIANEIADADKEQNSRINLEGS 240
           +E+LG N E  PV+AR+NVTG+NGR +R        SVFI   +                
Sbjct: 181 LEILGGNTESAPVAARVNVTGLNGRMKR--------SVFIGQGVRG-------------- 240

Query: 241 TWKRPSTFTLGRLGKMAQKRIEERLDVTDTELEGMKKEMQKLPAIERNLAKLSQTSEETV 300
                     GR+G+                                             
Sbjct: 241 ----------GRVGR--------------------------------------------- 292

Query: 301 KALAAIASEMVHWRTKSPSSGVTEASGSKGKEKESDTQNESESGRTGNSNAVNPFPGPSH 360
                                    SG  G+      QN+                    
Sbjct: 301 ----------------------GRGSGPSGRRLPLQ-QNQ-------------------- 292

Query: 361 RGGLRNGRGRGRGGWSRGLGGLGGGGRGRGRGRGRGRGQGQGRKKPVEKSSDELDKELEN 414
                      +GG + G GG  G GRG G GRG   G G+G KKPVEKS+ +LDK+LE+
Sbjct: 361 -----------QGGVTAGRGGFRGRGRGNGGGRGNKSG-GRGGKKPVEKSAADLDKDLES 292

[Close]

BLAST of Spg038607 vs. TAIR 10
Match: AT1G66260.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 214.9 bits (546), Expect = 1.2e-55
Identity = 166/426 (38.97%), Postives = 222/426 (52.11%), Query Frame = 0


Query: 1   MATPLDMSLEDVIKKNNREKLRA-----RGRARR-GRGAGGS---FNGGRGVVIGSVRRG 60
           M+  L+M+L++++KK+  E+  A     +G +R+ GRG GG      GGRG   G VRRG
Sbjct: 1   MSDALNMTLDEIVKKSKSERSAAARSGGKGVSRKSGRGRGGPNGVVGGGRGG--GPVRRG 60

Query: 61  PLSINARP-SAYSISKPPRRMKNVQW--QHDLFEDSLRASGISGIEIGTKLYVSNLDYGV 120
           PL++N RP S++SI+K  RR +++ W  Q+DL+E++LRA G+SG+E+GT +Y++NLD GV
Sbjct: 61  PLAVNTRPSSSFSINKLARRKRSLPWQNQNDLYEETLRAVGVSGVEVGTTVYITNLDQGV 120

Query: 121 TKEDIRELFSEIGDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMK 180
           T EDIREL++EIG+LKR+AIHYDKNGRPSGSAEVVY RRSDA  A+++YNNVLLDG+PMK
Sbjct: 121 TNEDIRELYAEIGELKRYAIHYDKNGRPSGSAEVVYMRRSDAIQAMRKYNNVLLDGRPMK 180

Query: 181 IEMLGDNAE-IPVSARINVTGVNGRSRRTVVLTLTDSVFIANEIADADKEQNSRINLEGS 240
           +E+LG N E  PV+AR+NVTG+NGR +R        SVFI   +                
Sbjct: 181 LEILGGNTESAPVAARVNVTGLNGRMKR--------SVFIGQGVRG-------------- 240

Query: 241 TWKRPSTFTLGRLGKMAQKRIEERLDVTDTELEGMKKEMQKLPAIERNLAKLSQTSEETV 300
                     GR+G+                                             
Sbjct: 241 ----------GRVGR--------------------------------------------- 292

Query: 301 KALAAIASEMVHWRTKSPSSGVTEASGSKGKEKESDTQNESESGRTGNSNAVNPFPGPSH 360
                                    SG  G+      QN+                    
Sbjct: 301 ----------------------GRGSGPSGRRLPLQ-QNQ-------------------- 292

Query: 361 RGGLRNGRGRGRGGWSRGLGGLGGGGRGRGRGRGRGRGQGQGRKKPVEKSSDELDKELEN 414
                      +GG + G GG  G GRG G GRG   G G+G KKPVEKS+ +LDK+LE+
Sbjct: 361 -----------QGGVTAGRGGFRGRGRGNGGGRGNKSG-GRGGKKPVEKSAADLDKDLES 292

[Close]

BLAST of Spg038607 vs. TAIR 10
Match: AT5G02530.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 167.2 bits (422), Expect = 2.9e-41
Identity = 95/191 (49.74%), Postives = 124/191 (64.92%), Query Frame = 0


Query: 1   MATPLDMSLEDVIKKNNREKLRARGRARRGRGAGGSFNGGRGVVIGSVRRGPLSINARPS 60
           M+  LDMSL+D+I K+NR+   +RGR   G G      GG G   G  RR    + AR +
Sbjct: 1   MSGGLDMSLDDII-KSNRKPTGSRGRGGIGGGNNTGGRGGSGSNSGPSRRFANRVGARTA 60

Query: 61  AYSISKPPRRMKNVQWQHDLF--EDSLRAS----------GISGIEIGTKLYVSNLDYGV 120
            YS     ++  +  WQ+D+F  + S+ A+          G S IE GTKLY+SNLDYGV
Sbjct: 61  PYSRPIQQQQAHDAMWQNDVFATDASVAAAFGHHQTAVVGGGSSIETGTKLYISNLDYGV 120

Query: 121 TKEDIRELFSEIGDLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMK 180
           + EDI+ELFSE+GDLKR+ IHYD++GR  G+AEVV++RR DA AA+KRYNNV LDGK MK
Sbjct: 121 SNEDIKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFSRRGDALAAVKRYNNVQLDGKLMK 180

HSP 2 Score: 27.7 bits (60), Expect = 2.7e+01
Identity = 44/91 (48.35%), Postives = 53/91 (58.24%), Query Frame = 0


Query: 330 SGRTGNSNAVNPFPGPSHRGGLRNGRGRGRGGW---SRGLGGLGGGGRGRGRG-RGR-GR 389
           +G  GN N    F G  +     N RGRGRGG+    RG GG GGG    GRG RGR GR
Sbjct: 205 NGILGNFN--ENFNGNFNGNFNGNFRGRGRGGFMGRPRG-GGFGGGNFRGGRGARGRGGR 264

Query: 390 GQGQGRKKPVEKSSDELDKELENYHAEAMQT 416
           G G GR +    S+++LD EL+ YH EAM+T
Sbjct: 265 GSG-GRGRDENVSAEDLDAELDKYHKEAMET 291

The following BLAST results are available for this feature:

BLAST of Spg038607 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023527122.1	5.1e-125	65.40	THO complex subunit 4D [Cucurbita pepo subsp. pepo]	[more]
XP_022935328.1	1.9e-124	65.17	THO complex subunit 4D-like [Cucurbita moschata] >XP_022935329.1 THO complex sub...	[more]
XP_022982649.1	1.3e-123	63.89	THO complex subunit 4D-like [Cucurbita maxima] >XP_022982650.1 THO complex subun...	[more]
XP_038896761.1	1.1e-122	64.58	THO complex subunit 4D-like [Benincasa hispida]	[more]
KAG6581189.1	1.5e-121	62.79	THO complex subunit 4C, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Spg038607 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NQ72	2.3e-59	40.48	THO complex subunit 4D OS=Arabidopsis thaliana OX=3702 GN=ALY4 PE=1 SV=1	[more]
Q94EH8	1.7e-54	38.97	THO complex subunit 4C OS=Arabidopsis thaliana OX=3702 GN=ALY3 PE=1 SV=1	[more]
Q8L719	4.0e-40	49.74	THO complex subunit 4B OS=Arabidopsis thaliana OX=3702 GN=ALY2 PE=1 SV=1	[more]
Q8L773	1.4e-37	48.07	THO complex subunit 4A OS=Arabidopsis thaliana OX=3702 GN=ALY1 PE=1 SV=1	[more]
B5FXN8	9.0e-32	44.86	THO complex subunit 4 OS=Taeniopygia guttata OX=59729 GN=ALYREF PE=2 SV=1	[more]

BLAST of Spg038607 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FAB9	9.4e-125	65.17	THO complex subunit 4D-like OS=Cucurbita moschata OX=3662 GN=LOC111442248 PE=4 S...	[more]
A0A6J1J564	6.1e-124	63.89	THO complex subunit 4D-like OS=Cucurbita maxima OX=3661 GN=LOC111481464 PE=4 SV=...	[more]
A0A1S3C452	1.6e-119	63.61	THO complex subunit 4D OS=Cucumis melo OX=3656 GN=LOC103496802 PE=4 SV=1	[more]
A0A6J1CP51	1.0e-115	62.65	THO complex subunit 4D-like OS=Momordica charantia OX=3673 GN=LOC111013262 PE=4 ...	[more]
A0A0A0L717	3.6e-100	94.50	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G302100 PE=4 SV...	[more]

BLAST of Spg038607 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G37720.2	2.5e-61	40.00	ALWAYS EARLY 4	[more]
AT5G37720.1	1.6e-60	40.48	ALWAYS EARLY 4	[more]
AT1G66260.1	1.2e-55	38.97	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G66260.2	1.2e-55	38.97	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G02530.1	2.9e-41	49.74	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 245..282
None	No IPR available	COILS	Coil	Coil	coord: 398..415
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 300..415
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 388..409
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 328..342
None	No IPR available	PANTHER	PTHR19965	RNA AND EXPORT FACTOR BINDING PROTEIN	coord: 1..204
None	No IPR available	PANTHER	PTHR19965:SF33	THO COMPLEX SUBUNIT 4C	coord: 358..415
None	No IPR available	PANTHER	PTHR19965:SF33	THO COMPLEX SUBUNIT 4C	coord: 1..204
None	No IPR available	PANTHER	PTHR19965	RNA AND EXPORT FACTOR BINDING PROTEIN	coord: 358..415
None	No IPR available	CDD	cd12680	RRM_THOC4	coord: 97..171 e-value: 3.49623E-41 score: 138.541
IPR025715	Chromatin target of PRMT1 protein, C-terminal	SMART	SM01218	FoP_duplication_2	coord: 343..415 e-value: 1.4E-11 score: 54.4
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 98..170 e-value: 8.3E-19 score: 78.5
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 99..167 e-value: 1.6E-14 score: 53.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 97..174 score: 15.203922
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 94..173 e-value: 2.5E-21 score: 77.7
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 31..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg038607.1	Spg038607.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding