Spg038577 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg038577
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	stress-induced protein KIN2-like
Location	scaffold12: 527123 .. 527840 (-)
RNA-Seq Expression	Spg038577
Synteny	Spg038577

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTCTACGAAACAAAATGGCGGACAACCCTCAGAAGATGAACTACCATATTGGAGAAGCGAAGGGCCAAGCACAGGTTCTTTATCACAACTATTTGTACTTAGCCACATTATTATTTTATTAAATGAGTTATGTTTTATTTTTAATAGTTAGTTGTACAAGCAGTACTATCCTAATATTAATTGTTTACTGATCTGATTGGATATACATGGTAATTTCTTAAAAAAGATTCCATACAATTTTTGTCTTAATTTTAAGAATAAGGGATGGTTGATAACATATTAATTAATTTGTGTAATTATATAGGAGAAAGCAAGCAATATGATGGACAAGGCAAGTGATGCAGCCCAATCAGCCAAGGAGTCGATGCAAGAAGCAGGACAACAAATGAAGGCCAAAGCACAGGGTGCAGCTGACGCTGTCAAGGATGCCACTGGCATGAATAAATAAAACCTTCCCATTTTCTATTATTCCATTTTTAGGGTTCTCCCAATGGCTTTGGTTCATTTTTATTTTTTCTTAGGCACTTATGTGTAAGGGCTTTTTTTTCCTTCCCTTTTGTGTGCAAGGAAAATCAAAAGCTCTTCTTTGAGCCTTTTCTCCCATTAAGAATGAGGGCTATTATTTTATTATTATGATTATTATATATATATATATATATATATATATATATATATATTGGAAAATAGAATAAGGGCTGATTTTATATGGATCAAAT

mRNA sequence

ATGGCGGACAACCCTCAGAAGATGAACTACCATATTGGAGAAGCGAAGGGCCAAGCACAGGAGAAAGCAAGCAATATGATGGACAAGGCAAGTGATGCAGCCCAATCAGCCAAGGAGTCGATGCAAGAAGCAGGACAACAAATGAAGGCCAAAGCACAGGGTGCAGCTGACGCTGTCAAGGATGCCACTGGCATGAATAAATAA

Coding sequence (CDS)

ATGGCGGACAACCCTCAGAAGATGAACTACCATATTGGAGAAGCGAAGGGCCAAGCACAGGAGAAAGCAAGCAATATGATGGACAAGGCAAGTGATGCAGCCCAATCAGCCAAGGAGTCGATGCAAGAAGCAGGACAACAAATGAAGGCCAAAGCACAGGGTGCAGCTGACGCTGTCAAGGATGCCACTGGCATGAATAAATAA

Protein sequence

MADNPQKMNYHIGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQMKAKAQGAADAVKDATGMNK

Homology

[Close]

BLAST of Spg038577 vs. NCBI nr
Match: XP_008437025.1 (PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0043490.1 stress-induced protein KIN2-like [Cucumis melo var. makuwa])

HSP 1 Score: 115.2 bits (287), Expect = 2.2e-22
Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  MADNPQKMNYHIGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQMKAKAQGAADAVK 60
          MADN QKM+YH+GEAKGQAQEKASNMMDKASD AQSAKESMQEAGQQMKAKAQGAADAVK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Spg038577 vs. NCBI nr
Match: XP_022159716.1 (stress-induced protein KIN2-like [Momordica charantia])

HSP 1 Score: 112.1 bits (279), Expect = 1.9e-21
Identity = 62/67 (92.54%), Postives = 64/67 (95.52%), Query Frame = 0


Query: 1  MADNPQKMNYHIGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQMKAKAQGAADAVK 60
          MADN QKM+YH GEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQ+KAKAQG ADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQVKAKAQGVADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Spg038577 vs. NCBI nr
Match: XP_022159706.1 (stress-induced protein KIN2-like [Momordica charantia])

HSP 1 Score: 112.1 bits (279), Expect = 1.9e-21
Identity = 62/67 (92.54%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  MADNPQKMNYHIGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQMKAKAQGAADAVK 60
          MADN QKM+YH GEAKGQAQEKASNMMDKASDAAQSAKES+QEAGQQ+KAKAQGAADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESVQEAGQQVKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Spg038577 vs. NCBI nr
Match: XP_004152387.1 (stress-induced protein KIN2 [Cucumis sativus] >KGN50291.1 hypothetical protein Csa_000602 [Cucumis sativus])

HSP 1 Score: 111.7 bits (278), Expect = 2.5e-21
Identity = 61/67 (91.04%), Postives = 64/67 (95.52%), Query Frame = 0


Query: 1  MADNPQKMNYHIGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQMKAKAQGAADAVK 60
          MADN +KM+YHIGEAKGQAQEKASN+MDKA D AQSAKESMQEAGQQMKAKAQGAADAVK
Sbjct: 1  MADNSEKMSYHIGEAKGQAQEKASNLMDKAGDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Spg038577 vs. NCBI nr
Match: GAV60064.1 (hypothetical protein CFOL_v3_03595 [Cephalotus follicularis])

HSP 1 Score: 107.8 bits (268), Expect = 3.6e-20
Identity = 60/67 (89.55%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MADNPQKMNYHIGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQMKAKAQGAADAVK 60
          MADN QKM+YH GEAKGQAQEKA  MMDKAS+AAQSAKESMQE GQQMKAKAQGAADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKAGTMMDKASNAAQSAKESMQETGQQMKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Spg038577 vs. ExPASy Swiss-Prot
Match: P31169 (Stress-induced protein KIN2 OS=Arabidopsis thaliana OX=3702 GN=KIN2 PE=2 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 3.7e-04
Identity = 27/61 (44.26%), Postives = 41/61 (67.21%), Query Frame = 0


Query: 7  KMNYHIGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQMKAKAQGAADAVKDATGMN 66
          K  +  G+A G+A+EK++ ++DKA DAA +A  S Q+AG+ +   A G  + VKD TG+N
Sbjct: 6  KNAFQAGQAAGKAEEKSNVLLDKAKDAAAAAGASAQQAGKSISDAAVGGVNFVKDKTGLN 65

Query: 67 K 68
          K
Sbjct: 66 K 66

[Close]

BLAST of Spg038577 vs. ExPASy TrEMBL
Match: A0A5A7TJP0 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00300 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.1e-22
Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  MADNPQKMNYHIGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQMKAKAQGAADAVK 60
          MADN QKM+YH+GEAKGQAQEKASNMMDKASD AQSAKESMQEAGQQMKAKAQGAADAVK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Spg038577 vs. ExPASy TrEMBL
Match: A0A1S3ASP1 (stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103482578 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.1e-22
Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  MADNPQKMNYHIGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQMKAKAQGAADAVK 60
          MADN QKM+YH+GEAKGQAQEKASNMMDKASD AQSAKESMQEAGQQMKAKAQGAADAVK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Spg038577 vs. ExPASy TrEMBL
Match: A0A6J1E4Q8 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026049 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 9.2e-22
Identity = 62/67 (92.54%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  MADNPQKMNYHIGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQMKAKAQGAADAVK 60
          MADN QKM+YH GEAKGQAQEKASNMMDKASDAAQSAKES+QEAGQQ+KAKAQGAADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESVQEAGQQVKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Spg038577 vs. ExPASy TrEMBL
Match: A0A6J1E4S0 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026055 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 9.2e-22
Identity = 62/67 (92.54%), Postives = 64/67 (95.52%), Query Frame = 0


Query: 1  MADNPQKMNYHIGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQMKAKAQGAADAVK 60
          MADN QKM+YH GEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQ+KAKAQG ADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQVKAKAQGVADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Spg038577 vs. ExPASy TrEMBL
Match: A0A0A0KRE1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165860 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-21
Identity = 61/67 (91.04%), Postives = 64/67 (95.52%), Query Frame = 0


Query: 1  MADNPQKMNYHIGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQMKAKAQGAADAVK 60
          MADN +KM+YHIGEAKGQAQEKASN+MDKA D AQSAKESMQEAGQQMKAKAQGAADAVK
Sbjct: 1  MADNSEKMSYHIGEAKGQAQEKASNLMDKAGDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Spg038577 vs. TAIR 10
Match: AT5G38760.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 82.8 bits (203), Expect = 1.1e-16
Identity = 45/67 (67.16%), Postives = 57/67 (85.07%), Query Frame = 0


Query: 1  MADNPQKMNYHIGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQMKAKAQGAADAVK 60
          M+ N Q +++  G+AKGQ QEKAS MMDKAS+AAQSAKES++E GQQ+K KAQGA ++VK
Sbjct: 1  MSSNSQNISFQAGQAKGQTQEKASTMMDKASNAAQSAKESLKETGQQIKEKAQGATESVK 60

Query: 61 DATGMNK 68
          +ATGMNK
Sbjct: 61 NATGMNK 67

[Close]

BLAST of Spg038577 vs. TAIR 10
Match: AT5G53820.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 80.9 bits (198), Expect = 4.4e-16
Identity = 42/67 (62.69%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 1  MADNPQKMNYHIGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQMKAKAQGAADAVK 60
          M++N Q M+++ G+AKGQ QEKASN++DKAS+AAQSAKES+QE GQQ+K KAQGA++ +K
Sbjct: 1  MSNNSQSMSFNAGQAKGQTQEKASNLIDKASNAAQSAKESIQEGGQQLKQKAQGASETIK 60

Query: 61 DATGMNK 68
          + TG++K
Sbjct: 61 EKTGISK 67

[Close]

BLAST of Spg038577 vs. TAIR 10
Match: AT3G02480.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 78.2 bits (191), Expect = 2.8e-15
Identity = 43/65 (66.15%), Postives = 50/65 (76.92%), Query Frame = 0


Query: 3  DNPQKMNYHIGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQMKAKAQGAADAVKDA 62
          DN Q  +Y  G+A GQ +EKA  MMDKA DAA SA++S+Q+ GQQMK KAQGAAD VKD 
Sbjct: 2  DNKQNASYQAGQATGQTKEKAGGMMDKAKDAAASAQDSLQQTGQQMKEKAQGAADVVKDK 61

Query: 63 TGMNK 68
          TGMNK
Sbjct: 62 TGMNK 66

[Close]

BLAST of Spg038577 vs. TAIR 10
Match: AT5G15970.1 (stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6) )

HSP 1 Score: 45.1 bits (105), Expect = 2.7e-05
Identity = 27/61 (44.26%), Postives = 41/61 (67.21%), Query Frame = 0


Query: 7  KMNYHIGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQMKAKAQGAADAVKDATGMN 66
          K  +  G+A G+A+EK++ ++DKA DAA +A  S Q+AG+ +   A G  + VKD TG+N
Sbjct: 6  KNAFQAGQAAGKAEEKSNVLLDKAKDAAAAAGASAQQAGKSISDAAVGGVNFVKDKTGLN 65

Query: 67 K 68
          K
Sbjct: 66 K 66

[Close]

BLAST of Spg038577 vs. TAIR 10
Match: AT5G15960.1 (stress-responsive protein (KIN1) / stress-induced protein (KIN1) )

HSP 1 Score: 42.0 bits (97), Expect = 2.2e-04
Identity = 25/61 (40.98%), Postives = 38/61 (62.30%), Query Frame = 0


Query: 7  KMNYHIGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQMKAKAQGAADAVKDATGMN 66
          K  +  G+  G+A+EK++ ++DKA DAA  A    Q+AG+ +   A G  + VKD TG+N
Sbjct: 6  KNAFQAGQTAGKAEEKSNVLLDKAKDAAAGAGAGAQQAGKSVSDAAAGGVNFVKDKTGLN 65

Query: 67 K 68
          K
Sbjct: 66 K 66

The following BLAST results are available for this feature:

BLAST of Spg038577 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437025.1	2.2e-22	94.03	PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0043490.1 stress-...	[more]
XP_022159716.1	1.9e-21	92.54	stress-induced protein KIN2-like [Momordica charantia]	[more]
XP_022159706.1	1.9e-21	92.54	stress-induced protein KIN2-like [Momordica charantia]	[more]
XP_004152387.1	2.5e-21	91.04	stress-induced protein KIN2 [Cucumis sativus] >KGN50291.1 hypothetical protein C...	[more]
GAV60064.1	3.6e-20	89.55	hypothetical protein CFOL_v3_03595 [Cephalotus follicularis]	[more]

BLAST of Spg038577 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P31169	3.7e-04	44.26	Stress-induced protein KIN2 OS=Arabidopsis thaliana OX=3702 GN=KIN2 PE=2 SV=1	[more]

BLAST of Spg038577 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TJP0	1.1e-22	94.03	Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3ASP1	1.1e-22	94.03	stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103482578 PE=4 SV...	[more]
A0A6J1E4Q8	9.2e-22	92.54	stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026049 ...	[more]
A0A6J1E4S0	9.2e-22	92.54	stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026055 ...	[more]
A0A0A0KRE1	1.2e-21	91.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165860 PE=4 SV=1	[more]

BLAST of Spg038577 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38760.1	1.1e-16	67.16	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G53820.1	4.4e-16	62.69	Late embryogenesis abundant protein (LEA) family protein	[more]
AT3G02480.1	2.8e-15	66.15	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G15970.1	2.7e-05	44.26	stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsi...	[more]
AT5G15960.1	2.2e-04	40.98	stress-responsive protein (KIN1) / stress-induced protein (KIN1)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 27..47
None	No IPR available	GENE3D	1.20.120.20	Apolipoprotein	coord: 2..65 e-value: 1.2E-5 score: 27.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..67
None	No IPR available	PANTHER	PTHR34191:SF15	BNAA01G32930D PROTEIN	coord: 1..67
IPR039624	Stress-induced protein KIN1/KIN2	PANTHER	PTHR34191	LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN	coord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg038577.1	Spg038577.1	mRNA