Spg038442 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg038442
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	UBA domain-containing protein
Location	scaffold12: 1323009 .. 1325651 (-)
RNA-Seq Expression	Spg038442
Synteny	Spg038442

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAAATCTAGGGACTAAAGTTGTAATTTAACTTAAATAATAAGGACTTAATTGAAAAAAACATATATTTAGACTGTATAAAAGTGGGAGGCCTTTATTGCAAATTAACAACAAAGCATTTCTAAATTCTACTTCTCTACAAAGCATTCAACTTGGATTGTCCACCGTCTTTCCCTCTCTCTCTCTCTCTCTCTCCTTCTGCTTTCTTCTTCTGTTCTCCAATGGCGTACGATTACAGAAACAAGCCCGCCCACTACGACGCTCATCCGCCGATGTACGGCCCAACCGCTTCATCCTCCCCATCTCCGTCACTCCATCCCATGTATGCACAGTCTATGTACCCGAGGATCGGTCAACAAGCTCATTCACCGGCGCCTCCGGTCGCCAGACTCTCATCCCACCACCATTCTTCTTCCCCTTCTCCCTCTCCTCCCTCCTCTTGTAAGTCCTCCTCCTTCGATCTCACTTGATTATGGGTTCTTGATGAATTGCTTAGTTTCCTAGTCTTTGCGAATTTCAGAAATGGATTTAGGGTTTTCTTGAATTGTTTGCTTGATTGTACAGCAGGATTGGGCATCAGGGTTACCATTAAACCGGAATATCTGATTACTCTGCCGGTGAGTTTTTGATTTTGAGTTCCTTCGAGTTGTTCGATTACTGTTATGAATGTGAGTCGGATCATGACGACTTTCTGGTCCTTTTATTTGGTTAATGGAAATGTTTGCTTCGGATTTTAATGGCTTGACCTTTTCTTTTAGCCTCAATTGTCGCCACAAATTGGAGATATTCCTCGGAGCAATTTCCAATTTGATTTTGAGTTTGAGAAAAAGGTTTTAGCTGAAGCAGAGAAAGAAAATCCGAATTGGAATCGGTTTGGGTTGGAACATCCTCCTTCTAAACCAGTAGAGTCGACATCTTCAATGGTAACGTCTCCCTTTTATTTTTTGTTTTCTTCTTTTTTCTTCATCAGGGCTTCTTGATATAATTTTAGCCTTTGGGTCGATTTCTTTCCTTGACATCATGTATCATATATATTTTTCCTTAGCAAGTGTATTGTTAATGGTTTGCACGTTAAAGTTCTGTGTTTCTTGTATAAAAAAATGTATTTTGTGTTAATTGTCTCTTGAAGAAGAAGGAAAATCTACTCGATTCTAGTTGATTGCCTTCTTCTTAGAATGGTATAATATGGTATGTCTCACGGATTCAGTTCCCTGATTCCTTTTGGAGGTCTACATTTCAGAATCTATACACTTGTCGTTATGAGTATGCATTTTTCATTGTAGGGTTCTATTGGAGATCCAGTTGTGAGCAAGTATGTTGCATCTGGCTTGAGTCGGGAAGCTGTTTCATTTGCAGTTGCTAATTATGGAGACAATCCCACCAAGGTAATTATGAATGATCTTTTTTTTTTTTGAGAAGAGAAACAATTCATTTCATTCGTAATTATGAATGATCGGTGGATTGTGGAGTGACATCCTAGGGAGATGGAATCTGATCTTATTGTAATGTATTATATTTATGCATTTGGTATATACTTGATATGATTTATCGCATATTAGATGATAGCATGTGTATAGAGCTTGCAGGATTAACTTTACTTCTCCCACTACTGTAATTCAGTTGCTCAAGATCCTGGGATGGAGGATCTATTCACTCTGATGTTATCTTATAGTTTATCCAATTCCACGTCAATGTTTTGCTACGAACATTCTAATATCTATTTGGTTTACCTCACCTTTTATAAGGTTAAAATATACTTTGTTGCCTCGCCTTTGAAGAGCTTAAAATGTAGTTTTGTTCTCTAAAGTTTATTCTTGTTTCTTAGCCTCGCCTTTCATAAGGTTAAAATATATTTTGTTGCCTCACCTTTGAAGAGGTTAAAATGTAGTTTTGTTCTCTAAAGTTTATTCTTGTTTCTTAGGGTCAGTTTGGAATGACTTTCTAGTTGTTTAAAAAAGTGTTTTTAAGTGCAAAAAAAAGTGTTTTTAAACACTTAAAAAGTCATTCCAAATGGGCACTTAATCCGGTCTCCAAACAACTTAGTCTCCAAGTTTTAATAAGTTCCAATATCATTCCATCTTGTAAAGTACTTCATTCTATGATGTGTCGCATGTCTATTGTTAGTTTTTGGCTTGGCTTTGCTGACTGACTCCAAATAATTTTGTAGGTTCAGGAATTTGTGAAAGGCTACACACTCCTACGAGAAATGGGATTCTCATCCAACAAGGTGGTCGAGGCATTACTCATGTATGACAATGACACTGATAAGGCTGTAGCTCATTTTCTTGGCGGTACGTCTTAATTGAGAATTGTGGAAATGATTGTGTCAAGAATTCTGTTGTACTTCAACTATGGCATCTTTGTATATGACAATAGAGGCCTCTTGAGATTGTAAATGTGATAAAAGAATATAGGCGTTTATAGATAGTGTCTATTCATTTACCTGATGGTGTTTCACCAGTACTTGCAGACTATACGTTATATTTTATATATATGCCTTTGGTTCAAATTCTATTGCAGAATTAACTAATAGGCTGATGGCAAGTTCAATGGTCAAATTACCATACTTTCCTACTTGGAATTTGGTTTTGATTGATATTTTTGGAGCAATATGATAAATGATCCATATGTTAGAC

mRNA sequence

ATGGCGTACGATTACAGAAACAAGCCCGCCCACTACGACGCTCATCCGCCGATGTACGGCCCAACCGCTTCATCCTCCCCATCTCCGTCACTCCATCCCATGTATGCACAGTCTATGTACCCGAGGATCGGTCAACAAGCTCATTCACCGGCGCCTCCGGTCGCCAGACTCTCATCCCACCACCATTCTTCTTCCCCTTCTCCCTCTCCTCCCTCCTCTTCAGGATTGGGCATCAGGGTTACCATTAAACCGGAATATCTGATTACTCTGCCGCCTCAATTGTCGCCACAAATTGGAGATATTCCTCGGAGCAATTTCCAATTTGATTTTGAGTTTGAGAAAAAGGTTTTAGCTGAAGCAGAGAAAGAAAATCCGAATTGGAATCGGTTTGGGTTGGAACATCCTCCTTCTAAACCAGTAGAGTCGACATCTTCAATGGGTTCTATTGGAGATCCAGTTGTGAGCAAGTATGTTGCATCTGGCTTGAGTCGGGAAGCTGTTTCATTTGCAGTTGCTAATTATGGAGACAATCCCACCAAGGTTCAGGAATTTGTGAAAGGCTACACACTCCTACGAGAAATGGGATTCTCATCCAACAAGGTGGTCGAGGCATTACTCATGTATGACAATGACACTGATAAGGCTGTAGCTCATTTTCTTGGCGGTACGTCTTAA

Coding sequence (CDS)

ATGGCGTACGATTACAGAAACAAGCCCGCCCACTACGACGCTCATCCGCCGATGTACGGCCCAACCGCTTCATCCTCCCCATCTCCGTCACTCCATCCCATGTATGCACAGTCTATGTACCCGAGGATCGGTCAACAAGCTCATTCACCGGCGCCTCCGGTCGCCAGACTCTCATCCCACCACCATTCTTCTTCCCCTTCTCCCTCTCCTCCCTCCTCTTCAGGATTGGGCATCAGGGTTACCATTAAACCGGAATATCTGATTACTCTGCCGCCTCAATTGTCGCCACAAATTGGAGATATTCCTCGGAGCAATTTCCAATTTGATTTTGAGTTTGAGAAAAAGGTTTTAGCTGAAGCAGAGAAAGAAAATCCGAATTGGAATCGGTTTGGGTTGGAACATCCTCCTTCTAAACCAGTAGAGTCGACATCTTCAATGGGTTCTATTGGAGATCCAGTTGTGAGCAAGTATGTTGCATCTGGCTTGAGTCGGGAAGCTGTTTCATTTGCAGTTGCTAATTATGGAGACAATCCCACCAAGGTTCAGGAATTTGTGAAAGGCTACACACTCCTACGAGAAATGGGATTCTCATCCAACAAGGTGGTCGAGGCATTACTCATGTATGACAATGACACTGATAAGGCTGTAGCTCATTTTCTTGGCGGTACGTCTTAA

Protein sequence

MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSMYPRIGQQAHSPAPPVARLSSHHHSSSPSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQIGDIPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSSNKVVEALLMYDNDTDKAVAHFLGGTS

Homology

[Close]

BLAST of Spg038442 vs. NCBI nr
Match: XP_022958203.1 (uncharacterized protein LOC111459499 [Cucurbita moschata])

HSP 1 Score: 412.5 bits (1059), Expect = 2.3e-111
Identity = 206/226 (91.15%), Postives = 213/226 (94.25%), Query Frame = 0


Query: 1   MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSMYPRIGQQAHSPAPPVARLSSH 60
           MAYDYRNKP +Y+AHPPMYGP ASSSPSPS+HPMY QSMYPRIGQQ HSPAPPVAR+SSH
Sbjct: 1   MAYDYRNKPGYYNAHPPMYGPAASSSPSPSIHPMYTQSMYPRIGQQGHSPAPPVARVSSH 60

Query: 61  HHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQIGDIPRSNFQFDFEFEKKVLA 120
           HHSSS  PSPS PSSSGLGIRVTIKPEY IT PPQLSPQ+GDIPRSNFQFDFEFEKKVLA
Sbjct: 61  HHSSSAAPSPSSPSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLA 120

Query: 121 EAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNP 180
           EAEKE PNWNRFGLEHPPS+PVES+SSMGS GDPVVSKYVASGLSREAVS AVANYGDNP
Sbjct: 121 EAEKETPNWNRFGLEHPPSRPVESSSSMGSPGDPVVSKYVASGLSREAVSLAVANYGDNP 180

Query: 181 TKVQEFVKGYTLLREMGFSSNKVVEALLMYDNDTDKAVAHFLGGTS 225
           TKVQEFVKGYTLLREMGF SNKVVEALLMYDNDTDKAVAHFLGGTS
Sbjct: 181 TKVQEFVKGYTLLREMGFPSNKVVEALLMYDNDTDKAVAHFLGGTS 226

[Close]

BLAST of Spg038442 vs. NCBI nr
Match: KAG7035731.1 (hypothetical protein SDJN02_02529 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 412.5 bits (1059), Expect = 2.3e-111
Identity = 206/226 (91.15%), Postives = 213/226 (94.25%), Query Frame = 0


Query: 1   MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSMYPRIGQQAHSPAPPVARLSSH 60
           MAYDYRNKP +Y+AHPPMYGP ASSSPSPS+HPMY QSMYPRIGQQ HSPAPPVAR+SSH
Sbjct: 44  MAYDYRNKPGYYNAHPPMYGPAASSSPSPSIHPMYTQSMYPRIGQQGHSPAPPVARVSSH 103

Query: 61  HHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQIGDIPRSNFQFDFEFEKKVLA 120
           HHSSS  PSPS PSSSGLGIRVTIKPEY IT PPQLSPQ+GDIPRSNFQFDFEFEKKVLA
Sbjct: 104 HHSSSAAPSPSSPSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLA 163

Query: 121 EAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNP 180
           EAEKE PNWNRFGLEHPPS+PVES+SSMGS GDPVVSKYVASGLSREAVS AVANYGDNP
Sbjct: 164 EAEKETPNWNRFGLEHPPSRPVESSSSMGSPGDPVVSKYVASGLSREAVSLAVANYGDNP 223

Query: 181 TKVQEFVKGYTLLREMGFSSNKVVEALLMYDNDTDKAVAHFLGGTS 225
           TKVQEFVKGYTLLREMGF SNKVVEALLMYDNDTDKAVAHFLGGTS
Sbjct: 224 TKVQEFVKGYTLLREMGFPSNKVVEALLMYDNDTDKAVAHFLGGTS 269

[Close]

BLAST of Spg038442 vs. NCBI nr
Match: XP_023534738.1 (uncharacterized protein LOC111796216 [Cucurbita pepo subsp. pepo] >XP_023534739.1 uncharacterized protein LOC111796216 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 411.4 bits (1056), Expect = 5.1e-111
Identity = 205/226 (90.71%), Postives = 213/226 (94.25%), Query Frame = 0


Query: 1   MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSMYPRIGQQAHSPAPPVARLSSH 60
           MAYDYRNKP +Y+AHPPMYGP ASSSPSPS+HPMY QSMYPRIGQQ HSPAPPVAR+SSH
Sbjct: 1   MAYDYRNKPGYYNAHPPMYGPAASSSPSPSIHPMYTQSMYPRIGQQGHSPAPPVARVSSH 60

Query: 61  HHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQIGDIPRSNFQFDFEFEKKVLA 120
           HHSSS  PSPS PSSSGLGIRVTIKPEY IT PPQLSPQ+GDIPRSNFQFDFEFEKKVLA
Sbjct: 61  HHSSSAAPSPSSPSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLA 120

Query: 121 EAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNP 180
           EAEKE PNWNRFGLEHPPS+PVES+SSMGS GDPVV+KYVASGLSREAVS AVANYGDNP
Sbjct: 121 EAEKETPNWNRFGLEHPPSRPVESSSSMGSPGDPVVNKYVASGLSREAVSLAVANYGDNP 180

Query: 181 TKVQEFVKGYTLLREMGFSSNKVVEALLMYDNDTDKAVAHFLGGTS 225
           TKVQEFVKGYTLLREMGF SNKVVEALLMYDNDTDKAVAHFLGGTS
Sbjct: 181 TKVQEFVKGYTLLREMGFPSNKVVEALLMYDNDTDKAVAHFLGGTS 226

[Close]

BLAST of Spg038442 vs. NCBI nr
Match: XP_022995350.1 (velvet complex subunit B [Cucurbita maxima])

HSP 1 Score: 409.5 bits (1051), Expect = 1.9e-110
Identity = 204/226 (90.27%), Postives = 212/226 (93.81%), Query Frame = 0


Query: 1   MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSMYPRIGQQAHSPAPPVARLSSH 60
           MAYDYRNKP +Y+AHPPMYGP ASSSPSPS+HPMY QSMYPRIGQQ HSPAPPV R+SSH
Sbjct: 1   MAYDYRNKPGYYNAHPPMYGPAASSSPSPSIHPMYTQSMYPRIGQQGHSPAPPVPRVSSH 60

Query: 61  HHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQIGDIPRSNFQFDFEFEKKVLA 120
           HHSSS  PSPS PSSSGLGIRVTIKPEY IT PPQLSPQ+GDIPRSNFQFDFEFEKKVLA
Sbjct: 61  HHSSSAAPSPSSPSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLA 120

Query: 121 EAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNP 180
           EAEKE PNWNRFGLEHPPS+PVES+SSMGS GDPVV+KYVASGLSREAVS AVANYGDNP
Sbjct: 121 EAEKETPNWNRFGLEHPPSRPVESSSSMGSPGDPVVNKYVASGLSREAVSLAVANYGDNP 180

Query: 181 TKVQEFVKGYTLLREMGFSSNKVVEALLMYDNDTDKAVAHFLGGTS 225
           TKVQEFVKGYTLLREMGF SNKVVEALLMYDNDTDKAVAHFLGGTS
Sbjct: 181 TKVQEFVKGYTLLREMGFPSNKVVEALLMYDNDTDKAVAHFLGGTS 226

[Close]

BLAST of Spg038442 vs. NCBI nr
Match: KAG6605766.1 (Ubiquitin-conjugating enzyme E2 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 409.1 bits (1050), Expect = 2.5e-110
Identity = 204/224 (91.07%), Postives = 211/224 (94.20%), Query Frame = 0


Query: 1   MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSMYPRIGQQAHSPAPPVARLSSH 60
           MAYDYRNKP +Y+AHPPMYGP ASSSPSPS+HPMY QSMYPRIGQQ HSPAPPVAR+SSH
Sbjct: 44  MAYDYRNKPGYYNAHPPMYGPAASSSPSPSIHPMYTQSMYPRIGQQGHSPAPPVARVSSH 103

Query: 61  HHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQIGDIPRSNFQFDFEFEKKVLA 120
           HHSSS  PSPS PSSSGLGIRVTIKPEY IT PPQLSPQ+GDIPRSNFQFDFEFEKKVLA
Sbjct: 104 HHSSSAAPSPSSPSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLA 163

Query: 121 EAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNP 180
           EAEKE PNWNRFGLEHPPS+PVES+SSMGS GDPVVSKYVASGLSREAVS AVANYGDNP
Sbjct: 164 EAEKETPNWNRFGLEHPPSRPVESSSSMGSPGDPVVSKYVASGLSREAVSLAVANYGDNP 223

Query: 181 TKVQEFVKGYTLLREMGFSSNKVVEALLMYDNDTDKAVAHFLGG 223
           TKVQEFVKGYTLLREMGF SNKVVEALLMYDNDTDKAVAHFLGG
Sbjct: 224 TKVQEFVKGYTLLREMGFPSNKVVEALLMYDNDTDKAVAHFLGG 267

[Close]

BLAST of Spg038442 vs. ExPASy TrEMBL
Match: A0A6J1H2H7 (uncharacterized protein LOC111459499 OS=Cucurbita moschata OX=3662 GN=LOC111459499 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.1e-111
Identity = 206/226 (91.15%), Postives = 213/226 (94.25%), Query Frame = 0


Query: 1   MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSMYPRIGQQAHSPAPPVARLSSH 60
           MAYDYRNKP +Y+AHPPMYGP ASSSPSPS+HPMY QSMYPRIGQQ HSPAPPVAR+SSH
Sbjct: 1   MAYDYRNKPGYYNAHPPMYGPAASSSPSPSIHPMYTQSMYPRIGQQGHSPAPPVARVSSH 60

Query: 61  HHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQIGDIPRSNFQFDFEFEKKVLA 120
           HHSSS  PSPS PSSSGLGIRVTIKPEY IT PPQLSPQ+GDIPRSNFQFDFEFEKKVLA
Sbjct: 61  HHSSSAAPSPSSPSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLA 120

Query: 121 EAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNP 180
           EAEKE PNWNRFGLEHPPS+PVES+SSMGS GDPVVSKYVASGLSREAVS AVANYGDNP
Sbjct: 121 EAEKETPNWNRFGLEHPPSRPVESSSSMGSPGDPVVSKYVASGLSREAVSLAVANYGDNP 180

Query: 181 TKVQEFVKGYTLLREMGFSSNKVVEALLMYDNDTDKAVAHFLGGTS 225
           TKVQEFVKGYTLLREMGF SNKVVEALLMYDNDTDKAVAHFLGGTS
Sbjct: 181 TKVQEFVKGYTLLREMGFPSNKVVEALLMYDNDTDKAVAHFLGGTS 226

[Close]

BLAST of Spg038442 vs. ExPASy TrEMBL
Match: A0A6J1K3U0 (velvet complex subunit B OS=Cucurbita maxima OX=3661 GN=LOC111490923 PE=4 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 9.3e-111
Identity = 204/226 (90.27%), Postives = 212/226 (93.81%), Query Frame = 0


Query: 1   MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSMYPRIGQQAHSPAPPVARLSSH 60
           MAYDYRNKP +Y+AHPPMYGP ASSSPSPS+HPMY QSMYPRIGQQ HSPAPPV R+SSH
Sbjct: 1   MAYDYRNKPGYYNAHPPMYGPAASSSPSPSIHPMYTQSMYPRIGQQGHSPAPPVPRVSSH 60

Query: 61  HHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQIGDIPRSNFQFDFEFEKKVLA 120
           HHSSS  PSPS PSSSGLGIRVTIKPEY IT PPQLSPQ+GDIPRSNFQFDFEFEKKVLA
Sbjct: 61  HHSSSAAPSPSSPSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLA 120

Query: 121 EAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNP 180
           EAEKE PNWNRFGLEHPPS+PVES+SSMGS GDPVV+KYVASGLSREAVS AVANYGDNP
Sbjct: 121 EAEKETPNWNRFGLEHPPSRPVESSSSMGSPGDPVVNKYVASGLSREAVSLAVANYGDNP 180

Query: 181 TKVQEFVKGYTLLREMGFSSNKVVEALLMYDNDTDKAVAHFLGGTS 225
           TKVQEFVKGYTLLREMGF SNKVVEALLMYDNDTDKAVAHFLGGTS
Sbjct: 181 TKVQEFVKGYTLLREMGFPSNKVVEALLMYDNDTDKAVAHFLGGTS 226

[Close]

BLAST of Spg038442 vs. ExPASy TrEMBL
Match: A0A0A0KNB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139700 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 3.7e-107
Identity = 201/224 (89.73%), Postives = 207/224 (92.41%), Query Frame = 0


Query: 1   MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSMYPRIGQQAHSPAPPVARLSSH 60
           MAYD+RN   HYD+H PMY  TASSSPSPS HPMY+ SMYPRIGQQA S  PPVARLSSH
Sbjct: 1   MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSH 60

Query: 61  HHSSSPSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQIGDIPRSNFQFDFEFEKKVLAEA 120
           H+SSSPSPSP SSSGLGIRVTIKPEY IT PPQLSPQ+GDIPRSNFQFDFEFEKKVLAEA
Sbjct: 61  HYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLAEA 120

Query: 121 EKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTK 180
           EKE PNWNRFGLEHPP KPVESTSSMGSIGDPVVSKYVASGL+REAVSFAVANYGDNPTK
Sbjct: 121 EKEAPNWNRFGLEHPPPKPVESTSSMGSIGDPVVSKYVASGLNREAVSFAVANYGDNPTK 180

Query: 181 VQEFVKGYTLLREMGFSSNKVVEALLMYDNDTDKAVAHFLGGTS 225
           VQEFVKGYTLLREMGFSS KVVEALLMYDNDTDKAVAHFLGGTS
Sbjct: 181 VQEFVKGYTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS 224

[Close]

BLAST of Spg038442 vs. ExPASy TrEMBL
Match: A0A1S3AUG0 (uncharacterized protein LOC103482940 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482940 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.2e-103
Identity = 197/224 (87.95%), Postives = 203/224 (90.62%), Query Frame = 0


Query: 1   MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSMYPRIGQQAHSPAPPVARLSSH 60
           MAYD+RN   HYD+H PMY  TASS+PSPS HPMY+QSMYPRIGQQA S  PPVARLSSH
Sbjct: 1   MAYDFRNNSGHYDSH-PMYASTASSTPSPSPHPMYSQSMYPRIGQQAPSSTPPVARLSSH 60

Query: 61  HHSSSPSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQIGDIPRSNFQFDFEFEKKVLAEA 120
           HHSSSPS SP SSSGLGIRVTIKPEY IT PPQLSPQ+GDIPRSNF FDFEFEKKVLAEA
Sbjct: 61  HHSSSPSSSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFHFDFEFEKKVLAEA 120

Query: 121 EKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTK 180
           EKE PNWNRFGLE  P KPVESTSSMGSIGDP VSKYVASGL+REAVSFAVANYGDNPTK
Sbjct: 121 EKEAPNWNRFGLEQLPPKPVESTSSMGSIGDPTVSKYVASGLNREAVSFAVANYGDNPTK 180

Query: 181 VQEFVKGYTLLREMGFSSNKVVEALLMYDNDTDKAVAHFLGGTS 225
           VQEFVKGYTLLREMGFSS KVVEALLMYDNDTDKAVAHFLGGTS
Sbjct: 181 VQEFVKGYTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS 223

[Close]

BLAST of Spg038442 vs. ExPASy TrEMBL
Match: A0A6J1DVL2 (uncharacterized protein LOC111023918 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023918 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 9.3e-103
Identity = 193/226 (85.40%), Postives = 204/226 (90.27%), Query Frame = 0


Query: 1   MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSM--YPRIGQQAHSPAPPVARLS 60
           MAYDYRNKP HYD+HPPMYGP AS+SPSPSLHPMY  SM  YPRIGQQ HSPAPPVAR+S
Sbjct: 1   MAYDYRNKPGHYDSHPPMYGPPASASPSPSLHPMYGHSMSLYPRIGQQGHSPAPPVARIS 60

Query: 61  SHHHSSSPSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQIGDIPRSNFQFDFEFEKKVLA 120
           SHHHSS  SPSPPSSSGLGI VTIKPEY IT PPQLSPQI DIPRSNFQFDFEFEKKVLA
Sbjct: 61  SHHHSS--SPSPPSSSGLGIGVTIKPEYRITPPPQLSPQIRDIPRSNFQFDFEFEKKVLA 120

Query: 121 EAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNP 180
           EAEKE  NW+RFGL++ P+KP E TS+MGS+GDPV SKY+ASGL+REAV FAVANYGDNP
Sbjct: 121 EAEKETQNWSRFGLDNLPAKPGEPTSTMGSLGDPVASKYIASGLNREAVRFAVANYGDNP 180

Query: 181 TKVQEFVKGYTLLREMGFSSNKVVEALLMYDNDTDKAVAHFLGGTS 225
           TKVQEF KGYTLLREMGFSSNKVVEALLMYDNDTDKAVAHFL GTS
Sbjct: 181 TKVQEFAKGYTLLREMGFSSNKVVEALLMYDNDTDKAVAHFLSGTS 224

[Close]

BLAST of Spg038442 vs. TAIR 10
Match: AT5G53330.1 (Ubiquitin-associated/translation elongation factor EF1B protein )

HSP 1 Score: 240.4 bits (612), Expect = 1.4e-63
Identity = 139/232 (59.91%), Postives = 167/232 (71.98%), Query Frame = 0


Query: 1   MAYDYRNKPAHYDAHPPMYGPTASSSPSPSL-HPMYAQSMYPRIGQQAHSPAP----PVA 60
           M YDYRNK        PMYGP  S+SPSPS  HPMY    YP+IGQQ   P P    P  
Sbjct: 1   MDYDYRNKSGGPSYPRPMYGP-PSTSPSPSSNHPMYG---YPKIGQQT-GPGPQFFSPPE 60

Query: 61  RLSSHHHSSSPSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQIGDIPRSNFQFDFEFEKK 120
           R SS  H++SP      SSG+GIRV +KPEY IT PPQL P++GDI RS+FQFDF  E+K
Sbjct: 61  RNSSFQHNTSP------SSGIGIRVNLKPEYRITPPPQLLPRVGDIHRSSFQFDFGLERK 120

Query: 121 VLAEAEKENPNWNRFGLEHPPSKPVE-STSSMGSIG--DPVVSKYVASGLSREAVSFAVA 180
           VLAEAEK+NP+W++FG E+PP+K  E S SS+G +   D VV KY ASGL+REAV+ AVA
Sbjct: 121 VLAEAEKDNPDWSKFGSENPPAKFHEPSPSSVGQMQGVDHVVMKYTASGLNREAVNIAVA 180

Query: 181 NYGDNPTKVQEFVKGYTLLREMGFSSNKVVEALLMYDNDTDKAVAHFLGGTS 225
           NYGDNPTKVQEF  G+T +REMGF +N V +AL M++NDTDKA+AH L G+S
Sbjct: 181 NYGDNPTKVQEFANGFTAIREMGFPTNAVADALFMFENDTDKALAHLLHGSS 221

The following BLAST results are available for this feature:

BLAST of Spg038442 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958203.1	2.3e-111	91.15	uncharacterized protein LOC111459499 [Cucurbita moschata]	[more]
KAG7035731.1	2.3e-111	91.15	hypothetical protein SDJN02_02529 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023534738.1	5.1e-111	90.71	uncharacterized protein LOC111796216 [Cucurbita pepo subsp. pepo] >XP_023534739....	[more]
XP_022995350.1	1.9e-110	90.27	velvet complex subunit B [Cucurbita maxima]	[more]
KAG6605766.1	2.5e-110	91.07	Ubiquitin-conjugating enzyme E2 10, partial [Cucurbita argyrosperma subsp. soror...	[more]

BLAST of Spg038442 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg038442 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H2H7	1.1e-111	91.15	uncharacterized protein LOC111459499 OS=Cucurbita moschata OX=3662 GN=LOC1114594...	[more]
A0A6J1K3U0	9.3e-111	90.27	velvet complex subunit B OS=Cucurbita maxima OX=3661 GN=LOC111490923 PE=4 SV=1	[more]
A0A0A0KNB8	3.7e-107	89.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139700 PE=4 SV=1	[more]
A0A1S3AUG0	3.2e-103	87.95	uncharacterized protein LOC103482940 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1DVL2	9.3e-103	85.40	uncharacterized protein LOC111023918 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Spg038442 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53330.1	1.4e-63	59.91	Ubiquitin-associated/translation elongation factor EF1B protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR042575	Ubiquitin-associated protein 1, C-terminal	GENE3D	1.20.120.1920	UBAP1 SOUBA domain	coord: 151..222 e-value: 2.5E-7 score: 32.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..76
None	No IPR available	PANTHER	PTHR15960:SF7	SUBFAMILY NOT NAMED	coord: 1..222
IPR038870	Ubiquitin-associated protein 1	PANTHER	PTHR15960	LD44032P	coord: 1..222
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 180..222 score: 8.908232
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 180..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg038442.1	Spg038442.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043162	ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
cellular_component	GO:0000813	ESCRT I complex
molecular_function	GO:0043130	ubiquitin binding
molecular_function	GO:0005515	protein binding