Spg038283 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg038283
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ribosomal protein L15
Location	scaffold12: 39529938 .. 39532077 (-)
RNA-Seq Expression	Spg038283
Synteny	Spg038283

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTCTTTCCGATCCAATGGGTACTCTCTACTTCTCTAGGGTTTTTCGTTAACACATTCGAACGATTCTCTTTTATCGTTTCAATTTACGGCTAGTATGAAGATGTTGTTCACAGTTTCCGAATCCATACTCTTGCTGATTGTTTTCACTCTTGTTCATACATTCGAAGTATCTTTCAGTTTTTGTTTAAGGAGAAGTTTAGATTGTTATGTGTATTTCTTTGTTGAAATCGAAAGTGTTCTTTCTTTTTTGCTGAATGTTTGTGTTTCGTTTTTGGAATTTGGAAAATAGGGGCGTACAAGTACGTGTCGGAGCTATGGAGGAAGAAGCAATCCGATGTGATGAGGTTTCTACAGAGGGTGAGATGCTGGGAGTATCGCCAACATCCATCCATTGTCCGTGTCACTCACCCCACTCGCCCTGATAAGGCTCGCCGTCTCGGTTACAAGGCCAAGCAGGTAAGATCTTCGACCATTTTGAGAGTCAGATGTTCATACAAGTCTTACTGTTTCGGGATATGTTTTTGAGCTCTTCATTTGATGATTGCTGAAACTTGTGTGCTATTTCTGTTGCACTACACTTAGAACGATTAGAAGAGTTTTCCCTAGGTGATTTGATTAGCATGTATTCAGTTATCATGTCCCTAAGGGTTTTTTTTTGCGCTGGATAAGTGGTATCTTGATGCGCTTACTTCCCTCTCTGTGGATTTTGTGTATAATGATTGGATACTTCCTGAGACCAGCTAAATTGAACTAAATATCGGTCACCCAACCAAGCAAATTCTCTTCATATGAATGTTGCTTTTGTCAAGGTCCGATACAGTTCAATCCCTTTTGTTATCTATTTCAAGTTTTCTTCCTGTAGTTTTTGTTTATAAGTTCTAGAGTTCCGTTTAATTTTGTAGGTGTAGCATAGATGCTTTGATGGTTTCGTACCCATTTTCCATAGGGAGTGGTTATTCGCATCTGCCATGATTTTGATAGGGTTGGAATGTTTTTACAGTTTTTAGTGTTCGGTCTGATTACTGCGCATTGTTGTAATCATAACTCAAGTAGCATCTTTTTTCACAAAAAAGAAAATATGATTATGTTGTAACCAACCATTTTTACTAATGAACTATACTTTTTGGTTGAGCTATATTTTATTGGGTATAGTGAATATACTTTTCTTTTCAGATTCAAATGGTTAACATAAGAAATTGGTTGCAGGGTTATGTGGTTTACAGAGTCCGTGTGAGGCGTGGTGGTAGGAAGAGGCCAGTTCCCAAGGGTATTGTGTATGGAAAGCCAACCAACCAGGGTGTTACCCAATTGAAGTTCCAGCGCAGCAAGAGATCAGTTGCAGAAGAACGAGCAGGACGAAAGTTGGGCGGTCTGAGGGTTCTCAACTCATACTGGATCAACGAGGTCTACACCTTTTTATTTCCTTTAGATAACCCAATAGGACCAGATAAATGGATGTGAAATTGAGATCGCACCCTTGTTATAACCTGTTAAATCCTTGCATATCATTCTCTTTTGTGCCTATCTTTCTGACCTTCTCGAAATTGAACAGGATTCAACTTACAAGTACTATGAGGTGATCTTGATCGATGTTGCCCACAATGCCGTTCGCAATGACCCAAGAATCAACTGGATCTGCAATCCAGTCCACAAGCACAGGGAGCTGAGAGGACTTACATCCGCCGGCAAGAAATACAGGGGACTCCGTGGAAAAGGACACTTGCACCACAAGGCCAGGCCTTCTCGCAGAGCAACCTGGAAGAGGAACAACACTCTCTCCCTCCGTCGTTACCGTTGATTTTGGTGATGTTTCTCTCTGTTTTGGTATCGTTATTATCTGCATTTTGTTTGGAGAATTTAGTGGAAGATACTACTTCGATCTAGAATTTTTCGAACTTAATATTTTACATTGAGAATTGTCAGGATTTTTCTAAACTAAGTGATAATTTTTGTTTATTGCAGCCTCTGTTTTTTATATCTCATAACAATTTTTGTTGGACCCGTTTGGTTGGAAGTTGTTTTGGATCCTTGAGATTTAGATGTCTGAAATAGTTGTATTTTATTATTCATGCATTTTAGAAAGACCAGTATATTTACATGAAAATTTTCGCCTATTATCAATATAATAGTGTCACAAG

mRNA sequence

ATGGGGGCGTACAAGTACGTGTCGGAGCTATGGAGGAAGAAGCAATCCGATGTGATGAGGTTTCTACAGAGGGTGAGATGCTGGGAGTATCGCCAACATCCATCCATTGTCCGTGTCACTCACCCCACTCGCCCTGATAAGGCTCGCCGTCTCGGTTACAAGGCCAAGCAGGGTTATGTGGTTTACAGAGTCCGTGTGAGGCGTGGTGGTAGGAAGAGGCCAGTTCCCAAGGGTATTGTGTATGGAAAGCCAACCAACCAGGGTGTTACCCAATTGAAGTTCCAGCGCAGCAAGAGATCAGTTGCAGAAGAACGAGCAGGACGAAAGTTGGGCGGTCTGAGGGTTCTCAACTCATACTGGATCAACGAGGATTCAACTTACAAGTACTATGAGGTGATCTTGATCGATGTTGCCCACAATGCCGTTCGCAATGACCCAAGAATCAACTGGATCTGCAATCCAGTCCACAAGCACAGGGAGCTGAGAGGACTTACATCCGCCGGCAAGAAATACAGGGGACTCCGTGGAAAAGGACACTTGCACCACAAGGCCAGGCCTTCTCGCAGAGCAACCTGGAAGAGGAACAACACTCTCTCCCTCCGTCGTTACCGTTGA

Coding sequence (CDS)

ATGGGGGCGTACAAGTACGTGTCGGAGCTATGGAGGAAGAAGCAATCCGATGTGATGAGGTTTCTACAGAGGGTGAGATGCTGGGAGTATCGCCAACATCCATCCATTGTCCGTGTCACTCACCCCACTCGCCCTGATAAGGCTCGCCGTCTCGGTTACAAGGCCAAGCAGGGTTATGTGGTTTACAGAGTCCGTGTGAGGCGTGGTGGTAGGAAGAGGCCAGTTCCCAAGGGTATTGTGTATGGAAAGCCAACCAACCAGGGTGTTACCCAATTGAAGTTCCAGCGCAGCAAGAGATCAGTTGCAGAAGAACGAGCAGGACGAAAGTTGGGCGGTCTGAGGGTTCTCAACTCATACTGGATCAACGAGGATTCAACTTACAAGTACTATGAGGTGATCTTGATCGATGTTGCCCACAATGCCGTTCGCAATGACCCAAGAATCAACTGGATCTGCAATCCAGTCCACAAGCACAGGGAGCTGAGAGGACTTACATCCGCCGGCAAGAAATACAGGGGACTCCGTGGAAAAGGACACTTGCACCACAAGGCCAGGCCTTCTCGCAGAGCAACCTGGAAGAGGAACAACACTCTCTCCCTCCGTCGTTACCGTTGA

Protein sequence

MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYYEVILIDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNNTLSLRRYR

Homology

[Close]

BLAST of Spg038283 vs. NCBI nr
Match: XP_022141052.1 (60S ribosomal protein L15-2 [Momordica charantia] >XP_022154831.1 60S ribosomal protein L15-2 [Momordica charantia])

HSP 1 Score: 420.2 bits (1079), Expect = 9.9e-114
Identity = 203/204 (99.51%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILIDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYYEVIL+DVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

[Close]

BLAST of Spg038283 vs. NCBI nr
Match: XP_022941772.1 (60S ribosomal protein L15 [Cucurbita moschata] >XP_022991671.1 60S ribosomal protein L15 [Cucurbita maxima] >KAG6600187.1 60S ribosomal protein L15, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030848.1 60S ribosomal protein L15, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 418.7 bits (1075), Expect = 2.9e-113
Identity = 202/204 (99.02%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILIDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKY+EVIL+DVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYFEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

[Close]

BLAST of Spg038283 vs. NCBI nr
Match: XP_022922395.1 (60S ribosomal protein L15-2-like [Cucurbita moschata] >XP_022957930.1 60S ribosomal protein L15-2-like [Cucurbita moschata] >XP_022972988.1 60S ribosomal protein L15-2-like [Cucurbita maxima] >XP_023521483.1 60S ribosomal protein L15-2 [Cucurbita pepo subsp. pepo] >XP_023533846.1 60S ribosomal protein L15-2 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023533847.1 60S ribosomal protein L15-2 isoform X2 [Cucurbita pepo subsp. pepo] >KAG6579403.1 60S ribosomal protein L15, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016881.1 60S ribosomal protein L15, partial [Cucurbita argyrosperma subsp. argyrosperma] >KAG6606168.1 60S ribosomal protein L15, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 418.3 bits (1074), Expect = 3.8e-113
Identity = 202/204 (99.02%), Postives = 203/204 (99.51%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRV HPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILIDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYYEVIL+DVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

[Close]

BLAST of Spg038283 vs. NCBI nr
Match: XP_004146916.1 (60S ribosomal protein L15-1 [Cucumis sativus] >XP_011650580.1 60S ribosomal protein L15-1 [Cucumis sativus] >XP_011650582.1 60S ribosomal protein L15-1 [Cucumis sativus] >KGN53150.1 hypothetical protein Csa_014815 [Cucumis sativus] >KGN56283.1 hypothetical protein Csa_009879 [Cucumis sativus] >KGN56284.1 hypothetical protein Csa_011281 [Cucumis sativus])

HSP 1 Score: 417.2 bits (1071), Expect = 8.4e-113
Identity = 201/204 (98.53%), Postives = 203/204 (99.51%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRV HPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120

Query: 121 INEDSTYKYYEVILIDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYYEVIL+DVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

[Close]

BLAST of Spg038283 vs. NCBI nr
Match: XP_038894199.1 (60S ribosomal protein L15-2-like [Benincasa hispida])

HSP 1 Score: 416.4 bits (1069), Expect = 1.4e-112
Identity = 202/204 (99.02%), Postives = 203/204 (99.51%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILIDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYYEVILIDVAHNAVRNDPRI+WIC PVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYYEVILIDVAHNAVRNDPRISWICKPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

[Close]

BLAST of Spg038283 vs. ExPASy Swiss-Prot
Match: O65082 (60S ribosomal protein L15-2 OS=Picea mariana OX=3335 GN=SB62 PE=2 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 1.9e-107
Identity = 184/204 (90.20%), Postives = 195/204 (95.59%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKY+ ELW+KKQSDVMRFLQRVRCWEYRQ P IVR+THPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYIEELWKKKQSDVMRFLQRVRCWEYRQLPGIVRITHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKP NQG+TQLKFQRS RSVAEERAGRKLGGLRVLNSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPKNQGITQLKFQRSLRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILIDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           IN+DSTYKYYEV+L+D AH  +RNDPRINWICN VHKHRELRGLTSAGKKYRGLRG+GHL
Sbjct: 121 INQDSTYKYYEVVLVDQAHTVIRNDPRINWICNAVHKHRELRGLTSAGKKYRGLRGRGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           +HKARPS+RATWKRNNTLSLRRYR
Sbjct: 181 YHKARPSKRATWKRNNTLSLRRYR 204

[Close]

BLAST of Spg038283 vs. ExPASy Swiss-Prot
Match: O23515 (60S ribosomal protein L15-1 OS=Arabidopsis thaliana OX=3702 GN=RPL15A PE=2 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 3.2e-107
Identity = 187/204 (91.67%), Postives = 196/204 (96.08%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVR+  PTRPDKARRLGYKAKQG+V
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLVRPTRPDKARRLGYKAKQGFV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120

Query: 121 INEDSTYKYYEVILIDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           +NEDSTYKYYE+IL+D AHNAVRNDPRINWICNPVHKHRELRGLTS GKK RGLRGKGH 
Sbjct: 121 LNEDSTYKYYEIILVDPAHNAVRNDPRINWICNPVHKHRELRGLTSEGKKNRGLRGKGHN 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           +HK RPSRRATWK+NN+LSLRRYR
Sbjct: 181 NHKNRPSRRATWKKNNSLSLRRYR 204

[Close]

BLAST of Spg038283 vs. ExPASy Swiss-Prot
Match: Q8VYF1 (60S ribosomal protein L15-2 OS=Arabidopsis thaliana OX=3702 GN=RPL15B PE=2 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 5.5e-107
Identity = 186/204 (91.18%), Postives = 196/204 (96.08%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVR+  PTRPDKARRLGYKAKQG+V
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLVRPTRPDKARRLGYKAKQGFV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120

Query: 121 INEDSTYKYYEVILIDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           +NEDSTYKYYE+IL+D AHNAVRNDPRINWICNPVHKHRELRGLTS GKK RGLRGKGH 
Sbjct: 121 LNEDSTYKYYEIILVDPAHNAVRNDPRINWICNPVHKHRELRGLTSEGKKNRGLRGKGHN 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           +HK RPSRRATWK+NN++SLRRYR
Sbjct: 181 NHKNRPSRRATWKKNNSISLRRYR 204

[Close]

BLAST of Spg038283 vs. ExPASy Swiss-Prot
Match: O82528 (60S ribosomal protein L15 OS=Petunia hybrida OX=4102 GN=RPL15 PE=2 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 9.4e-107
Identity = 188/204 (92.16%), Postives = 195/204 (95.59%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAY YVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVRVT PTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYTYVSELWRKKQSDVMRFLQRVRCWEYRQLPSIVRVTRPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRV+RGGRKRPVPKGIVYGKPTNQGVTQLKFQR+KRSVAEERAGRKLGGLRVLNSYW
Sbjct: 61  VYRVRVKRGGRKRPVPKGIVYGKPTNQGVTQLKFQRTKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILIDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKY+EVIL+D AH A+RNDPRINWICNPVHKHRELRGLTSAGKKYRGLRG+GHL
Sbjct: 121 INEDSTYKYFEVILVDQAHAAIRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGRGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           H+KA PSRRA WKRN TLSL RYR
Sbjct: 181 HNKAPPSRRANWKRNQTLSLPRYR 204

[Close]

BLAST of Spg038283 vs. ExPASy Swiss-Prot
Match: O65050 (60S ribosomal protein L15-1 OS=Picea mariana OX=3335 GN=SB61 PE=2 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 1.4e-105
Identity = 182/204 (89.22%), Postives = 195/204 (95.59%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKY+ ELW+KKQSDVMRFLQRVRCWE+RQ P IVRVT P+RPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYIEELWKKKQSDVMRFLQRVRCWEFRQLPGIVRVTRPSRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKP NQG+TQLKFQRS RSVAEERAGRKLGGLRVLNSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPKNQGITQLKFQRSLRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILIDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           IN+DSTYKYYE+IL+D AH+A+R DPRINWICN VHKHRELRGLTSAGKKYRGLRG+GHL
Sbjct: 121 INQDSTYKYYEIILVDQAHSAIRKDPRINWICNAVHKHRELRGLTSAGKKYRGLRGRGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           +HKARPS+RATWKRNNTLSLRRYR
Sbjct: 181 YHKARPSKRATWKRNNTLSLRRYR 204

[Close]

BLAST of Spg038283 vs. ExPASy TrEMBL
Match: A0A6J1CIS0 (Ribosomal protein L15 OS=Momordica charantia OX=3673 GN=LOC111011546 PE=3 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 4.8e-114
Identity = 203/204 (99.51%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILIDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYYEVIL+DVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

[Close]

BLAST of Spg038283 vs. ExPASy TrEMBL
Match: A0A6J1JRE5 (Ribosomal protein L15 OS=Cucurbita maxima OX=3661 GN=LOC111488214 PE=3 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.4e-113
Identity = 202/204 (99.02%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILIDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKY+EVIL+DVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYFEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

[Close]

BLAST of Spg038283 vs. ExPASy TrEMBL
Match: A0A6J1FNE6 (Ribosomal protein L15 OS=Cucurbita moschata OX=3662 GN=LOC111447041 PE=3 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.4e-113
Identity = 202/204 (99.02%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILIDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKY+EVIL+DVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYFEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

[Close]

BLAST of Spg038283 vs. ExPASy TrEMBL
Match: A0A6J1H209 (Ribosomal protein L15 OS=Cucurbita moschata OX=3662 GN=LOC111459317 PE=3 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 1.8e-113
Identity = 202/204 (99.02%), Postives = 203/204 (99.51%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRV HPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILIDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYYEVIL+DVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

[Close]

BLAST of Spg038283 vs. ExPASy TrEMBL
Match: A0A6J1IBQ7 (Ribosomal protein L15 OS=Cucurbita maxima OX=3661 GN=LOC111471514 PE=3 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 1.8e-113
Identity = 202/204 (99.02%), Postives = 203/204 (99.51%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRV HPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILIDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYYEVIL+DVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

[Close]

BLAST of Spg038283 vs. TAIR 10
Match: AT4G16720.1 (Ribosomal protein L23/L15e family protein )

HSP 1 Score: 389.0 bits (998), Expect = 2.3e-108
Identity = 187/204 (91.67%), Postives = 196/204 (96.08%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVR+  PTRPDKARRLGYKAKQG+V
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLVRPTRPDKARRLGYKAKQGFV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120

Query: 121 INEDSTYKYYEVILIDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           +NEDSTYKYYE+IL+D AHNAVRNDPRINWICNPVHKHRELRGLTS GKK RGLRGKGH 
Sbjct: 121 LNEDSTYKYYEIILVDPAHNAVRNDPRINWICNPVHKHRELRGLTSEGKKNRGLRGKGHN 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           +HK RPSRRATWK+NN+LSLRRYR
Sbjct: 181 NHKNRPSRRATWKKNNSLSLRRYR 204

[Close]

BLAST of Spg038283 vs. TAIR 10
Match: AT4G17390.1 (Ribosomal protein L23/L15e family protein )

HSP 1 Score: 388.3 bits (996), Expect = 3.9e-108
Identity = 186/204 (91.18%), Postives = 196/204 (96.08%), Query Frame = 0


Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVR+  PTRPDKARRLGYKAKQG+V
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLVRPTRPDKARRLGYKAKQGFV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120

Query: 121 INEDSTYKYYEVILIDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           +NEDSTYKYYE+IL+D AHNAVRNDPRINWICNPVHKHRELRGLTS GKK RGLRGKGH 
Sbjct: 121 LNEDSTYKYYEIILVDPAHNAVRNDPRINWICNPVHKHRELRGLTSEGKKNRGLRGKGHN 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           +HK RPSRRATWK+NN++SLRRYR
Sbjct: 181 NHKNRPSRRATWKKNNSISLRRYR 204

The following BLAST results are available for this feature:

BLAST of Spg038283 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141052.1	9.9e-114	99.51	60S ribosomal protein L15-2 [Momordica charantia] >XP_022154831.1 60S ribosomal ...	[more]
XP_022941772.1	2.9e-113	99.02	60S ribosomal protein L15 [Cucurbita moschata] >XP_022991671.1 60S ribosomal pro...	[more]
XP_022922395.1	3.8e-113	99.02	60S ribosomal protein L15-2-like [Cucurbita moschata] >XP_022957930.1 60S riboso...	[more]
XP_004146916.1	8.4e-113	98.53	60S ribosomal protein L15-1 [Cucumis sativus] >XP_011650580.1 60S ribosomal prot...	[more]
XP_038894199.1	1.4e-112	99.02	60S ribosomal protein L15-2-like [Benincasa hispida]	[more]

BLAST of Spg038283 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65082	1.9e-107	90.20	60S ribosomal protein L15-2 OS=Picea mariana OX=3335 GN=SB62 PE=2 SV=1	[more]
O23515	3.2e-107	91.67	60S ribosomal protein L15-1 OS=Arabidopsis thaliana OX=3702 GN=RPL15A PE=2 SV=1	[more]
Q8VYF1	5.5e-107	91.18	60S ribosomal protein L15-2 OS=Arabidopsis thaliana OX=3702 GN=RPL15B PE=2 SV=1	[more]
O82528	9.4e-107	92.16	60S ribosomal protein L15 OS=Petunia hybrida OX=4102 GN=RPL15 PE=2 SV=1	[more]
O65050	1.4e-105	89.22	60S ribosomal protein L15-1 OS=Picea mariana OX=3335 GN=SB61 PE=2 SV=1	[more]

BLAST of Spg038283 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CIS0	4.8e-114	99.51	Ribosomal protein L15 OS=Momordica charantia OX=3673 GN=LOC111011546 PE=3 SV=1	[more]
A0A6J1JRE5	1.4e-113	99.02	Ribosomal protein L15 OS=Cucurbita maxima OX=3661 GN=LOC111488214 PE=3 SV=1	[more]
A0A6J1FNE6	1.4e-113	99.02	Ribosomal protein L15 OS=Cucurbita moschata OX=3662 GN=LOC111447041 PE=3 SV=1	[more]
A0A6J1H209	1.8e-113	99.02	Ribosomal protein L15 OS=Cucurbita moschata OX=3662 GN=LOC111459317 PE=3 SV=1	[more]
A0A6J1IBQ7	1.8e-113	99.02	Ribosomal protein L15 OS=Cucurbita maxima OX=3661 GN=LOC111471514 PE=3 SV=1	[more]

BLAST of Spg038283 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16720.1	2.3e-108	91.67	Ribosomal protein L23/L15e family protein	[more]
AT4G17390.1	3.9e-108	91.18	Ribosomal protein L23/L15e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000439	Ribosomal protein L15e	SMART	SM01384	Ribosomal_L15e_2	coord: 2..193 e-value: 3.7E-143 score: 491.6
IPR000439	Ribosomal protein L15e	PFAM	PF00827	Ribosomal_L15e	coord: 2..190 e-value: 4.3E-91 score: 303.8
IPR000439	Ribosomal protein L15e	PANTHER	PTHR11847	RIBOSOMAL PROTEIN L15	coord: 1..204
IPR024794	Ribosomal protein L15e core domain superfamily	GENE3D	3.40.1120.10	Ribosomal protein l15e	coord: 1..204 e-value: 2.4E-117 score: 391.8
None	No IPR available	PANTHER	PTHR11847:SF25	RIBOSOMAL PROTEIN L15	coord: 1..204
IPR020925	Ribosomal protein L15e, conserved site	PROSITE	PS01194	RIBOSOMAL_L15E	coord: 46..69
IPR012678	Ribosomal protein L23/L15e core domain superfamily	SUPERFAMILY	54189	Ribosomal proteins S24e, L23 and L15e	coord: 1..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg038283.1	Spg038283.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome