Spg038112 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg038112
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Allyl alcohol dehydrogenase-like protein
Location	scaffold12: 40378855 .. 40379151 (+)
RNA-Seq Expression	Spg038112
Synteny	Spg038112

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCTTCTCTCATGGTGGAAAGGCGATTCTGCACCAGCGGAGTCCAATTCGAAGTCGCAGTCTCCTCAGAAAACTGTCTCTCAGCCGGCCGAAGTCCCTGGCCTCAACGGCGCCGTCGAAGTCCCCCGACCGGCCGCCACTGTGACGGTCTTCGAGTTCGGCTCCGTCTCCTCTTCCTCCGATAAGGTCACGCTCGCCGGTTACTGCCCCGTCTCCGACGACCTCGAGCCCTGCCGCTGGGAGATTCTGCCGGCGAGCGGCTCCGAGGCGCCTCTTTTTCGCGTCGTCTTTTGA

mRNA sequence

ATGGGTCTTCTCTCATGGTGGAAAGGCGATTCTGCACCAGCGGAGTCCAATTCGAAGTCGCAGTCTCCTCAGAAAACTGTCTCTCAGCCGGCCGAAGTCCCTGGCCTCAACGGCGCCGTCGAAGTCCCCCGACCGGCCGCCACTGTGACGGTCTTCGAGTTCGGCTCCGTCTCCTCTTCCTCCGATAAGGTCACGCTCGCCGGTTACTGCCCCGTCTCCGACGACCTCGAGCCCTGCCGCTGGGAGATTCTGCCGGCGAGCGGCTCCGAGGCGCCTCTTTTTCGCGTCGTCTTTTGA

Coding sequence (CDS)

ATGGGTCTTCTCTCATGGTGGAAAGGCGATTCTGCACCAGCGGAGTCCAATTCGAAGTCGCAGTCTCCTCAGAAAACTGTCTCTCAGCCGGCCGAAGTCCCTGGCCTCAACGGCGCCGTCGAAGTCCCCCGACCGGCCGCCACTGTGACGGTCTTCGAGTTCGGCTCCGTCTCCTCTTCCTCCGATAAGGTCACGCTCGCCGGTTACTGCCCCGTCTCCGACGACCTCGAGCCCTGCCGCTGGGAGATTCTGCCGGCGAGCGGCTCCGAGGCGCCTCTTTTTCGCGTCGTCTTTTGA

Protein sequence

MGLLSWWKGDSAPAESNSKSQSPQKTVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSSSSDKVTLAGYCPVSDDLEPCRWEILPASGSEAPLFRVVF

Homology

[Close]

BLAST of Spg038112 vs. NCBI nr
Match: XP_022972011.1 (uncharacterized protein LOC111470658 [Cucurbita maxima])

HSP 1 Score: 183.7 bits (465), Expect = 7.5e-43
Identity = 89/98 (90.82%), Postives = 92/98 (93.88%), Query Frame = 0


Query: 1  MGLLSWWKGDSAPAESNSKSQSPQKTVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSSS 60
          MGLLSWWKG SAP+ESNSKSQ P K VSQPAEVPGLNGAVEVPRPAATVTVFEFGSVS+S
Sbjct: 1  MGLLSWWKGGSAPSESNSKSQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSAS 60

Query: 61 SDKVTLAGYCPVSDDLEPCRWEILPASGSEAPLFRVVF 99
          SD VTL GYCPVSDDLEPCRWEILPASGS+APLFRVVF
Sbjct: 61 SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 98

[Close]

BLAST of Spg038112 vs. NCBI nr
Match: XP_038886991.1 (uncharacterized protein LOC120077159 [Benincasa hispida] >XP_038886992.1 uncharacterized protein LOC120077159 [Benincasa hispida])

HSP 1 Score: 183.7 bits (465), Expect = 7.5e-43
Identity = 89/98 (90.82%), Postives = 92/98 (93.88%), Query Frame = 0


Query: 1  MGLLSWWKGDSAPAESNSKSQSPQKTVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSSS 60
          MGLLSWWKG S P++SNSK   PQK VSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSSS
Sbjct: 1  MGLLSWWKGQSPPSDSNSKPPPPQKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSSS 60

Query: 61 SDKVTLAGYCPVSDDLEPCRWEILPASGSEAPLFRVVF 99
          SDKVTLAGYCPVSDDLEPCRWEILPASGS+APLFRVVF
Sbjct: 61 SDKVTLAGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 98

[Close]

BLAST of Spg038112 vs. NCBI nr
Match: XP_022952897.1 (uncharacterized protein LOC111455443 [Cucurbita moschata] >KAG7011515.1 hypothetical protein SDJN02_26421, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 181.8 bits (460), Expect = 2.9e-42
Identity = 88/98 (89.80%), Postives = 91/98 (92.86%), Query Frame = 0


Query: 1  MGLLSWWKGDSAPAESNSKSQSPQKTVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSSS 60
          MGLLSWWKG SAP+ESNSK Q P K VSQPAEVPGLNGAVEVPRPAATVTVFEFGSVS+S
Sbjct: 1  MGLLSWWKGGSAPSESNSKPQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSAS 60

Query: 61 SDKVTLAGYCPVSDDLEPCRWEILPASGSEAPLFRVVF 99
          SD VTL GYCPVSDDLEPCRWEILPASGS+APLFRVVF
Sbjct: 61 SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 98

[Close]

BLAST of Spg038112 vs. NCBI nr
Match: XP_023554244.1 (uncharacterized protein LOC111811567 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 179.9 bits (455), Expect = 1.1e-41
Identity = 87/98 (88.78%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 1  MGLLSWWKGDSAPAESNSKSQSPQKTVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSSS 60
          MGLLSWWKG SAP+ESNSK Q P K VSQP EVPGLNGAVEVPRPAATVTVFEFGSVS+S
Sbjct: 1  MGLLSWWKGGSAPSESNSKPQPPPKNVSQPPEVPGLNGAVEVPRPAATVTVFEFGSVSAS 60

Query: 61 SDKVTLAGYCPVSDDLEPCRWEILPASGSEAPLFRVVF 99
          SD VTL GYCPVSDDLEPCRWEILPASGS+APLFRVVF
Sbjct: 61 SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 98

[Close]

BLAST of Spg038112 vs. NCBI nr
Match: XP_022157409.1 (uncharacterized protein LOC111024112 [Momordica charantia])

HSP 1 Score: 173.3 bits (438), Expect = 1.0e-39
Identity = 85/98 (86.73%), Postives = 91/98 (92.86%), Query Frame = 0


Query: 1  MGLLSWWKGDSAPAESNSKSQSPQKTVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSSS 60
          MGLLSWWKG++AP+ESNSK Q P   VSQPAEVPGLNGAVEVPRP  +VTVFEFGSVSSS
Sbjct: 1  MGLLSWWKGEAAPSESNSKPQPPLXNVSQPAEVPGLNGAVEVPRP-GSVTVFEFGSVSSS 60

Query: 61 SDKVTLAGYCPVSDDLEPCRWEILPASGSEAPLFRVVF 99
          SDKVTLAGYCPVSDDLEPCRWEILPA+GS+APLFRVVF
Sbjct: 61 SDKVTLAGYCPVSDDLEPCRWEILPATGSDAPLFRVVF 97

[Close]

BLAST of Spg038112 vs. ExPASy TrEMBL
Match: A0A6J1I4S4 (uncharacterized protein LOC111470658 OS=Cucurbita maxima OX=3661 GN=LOC111470658 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.6e-43
Identity = 89/98 (90.82%), Postives = 92/98 (93.88%), Query Frame = 0


Query: 1  MGLLSWWKGDSAPAESNSKSQSPQKTVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSSS 60
          MGLLSWWKG SAP+ESNSKSQ P K VSQPAEVPGLNGAVEVPRPAATVTVFEFGSVS+S
Sbjct: 1  MGLLSWWKGGSAPSESNSKSQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSAS 60

Query: 61 SDKVTLAGYCPVSDDLEPCRWEILPASGSEAPLFRVVF 99
          SD VTL GYCPVSDDLEPCRWEILPASGS+APLFRVVF
Sbjct: 61 SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 98

[Close]

BLAST of Spg038112 vs. ExPASy TrEMBL
Match: A0A6J1GLN4 (uncharacterized protein LOC111455443 OS=Cucurbita moschata OX=3662 GN=LOC111455443 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.4e-42
Identity = 88/98 (89.80%), Postives = 91/98 (92.86%), Query Frame = 0


Query: 1  MGLLSWWKGDSAPAESNSKSQSPQKTVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSSS 60
          MGLLSWWKG SAP+ESNSK Q P K VSQPAEVPGLNGAVEVPRPAATVTVFEFGSVS+S
Sbjct: 1  MGLLSWWKGGSAPSESNSKPQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSAS 60

Query: 61 SDKVTLAGYCPVSDDLEPCRWEILPASGSEAPLFRVVF 99
          SD VTL GYCPVSDDLEPCRWEILPASGS+APLFRVVF
Sbjct: 61 SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 98

[Close]

BLAST of Spg038112 vs. ExPASy TrEMBL
Match: A0A6J1DWE4 (uncharacterized protein LOC111024112 OS=Momordica charantia OX=3673 GN=LOC111024112 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.9e-40
Identity = 85/98 (86.73%), Postives = 91/98 (92.86%), Query Frame = 0


Query: 1  MGLLSWWKGDSAPAESNSKSQSPQKTVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSSS 60
          MGLLSWWKG++AP+ESNSK Q P   VSQPAEVPGLNGAVEVPRP  +VTVFEFGSVSSS
Sbjct: 1  MGLLSWWKGEAAPSESNSKPQPPLXNVSQPAEVPGLNGAVEVPRP-GSVTVFEFGSVSSS 60

Query: 61 SDKVTLAGYCPVSDDLEPCRWEILPASGSEAPLFRVVF 99
          SDKVTLAGYCPVSDDLEPCRWEILPA+GS+APLFRVVF
Sbjct: 61 SDKVTLAGYCPVSDDLEPCRWEILPATGSDAPLFRVVF 97

[Close]

BLAST of Spg038112 vs. ExPASy TrEMBL
Match: A0A5D3E692 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004090 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.6e-38
Identity = 80/99 (80.81%), Postives = 90/99 (90.91%), Query Frame = 0


Query: 1  MGLLSWWKGDSAPAESNSK-SQSPQKTVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSS 60
          MGLLSWWKG S P++S SK  Q P K +SQPAEVPGLNGA+EVPRPAA+VTVFEFGSV++
Sbjct: 1  MGLLSWWKGQSPPSDSTSKPPQPPSKNLSQPAEVPGLNGALEVPRPAASVTVFEFGSVTA 60

Query: 61 SSDKVTLAGYCPVSDDLEPCRWEILPASGSEAPLFRVVF 99
          SSDKVTLAGYCPVSDD EPCRWEI+PASGS+APLFR+VF
Sbjct: 61 SSDKVTLAGYCPVSDDFEPCRWEIMPASGSDAPLFRIVF 99

[Close]

BLAST of Spg038112 vs. ExPASy TrEMBL
Match: A0A1S3CQC7 (uncharacterized protein LOC103503504 OS=Cucumis melo OX=3656 GN=LOC103503504 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.6e-38
Identity = 80/99 (80.81%), Postives = 90/99 (90.91%), Query Frame = 0


Query: 1  MGLLSWWKGDSAPAESNSK-SQSPQKTVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSS 60
          MGLLSWWKG S P++S SK  Q P K +SQPAEVPGLNGA+EVPRPAA+VTVFEFGSV++
Sbjct: 1  MGLLSWWKGQSPPSDSTSKPPQPPSKNLSQPAEVPGLNGALEVPRPAASVTVFEFGSVTA 60

Query: 61 SSDKVTLAGYCPVSDDLEPCRWEILPASGSEAPLFRVVF 99
          SSDKVTLAGYCPVSDD EPCRWEI+PASGS+APLFR+VF
Sbjct: 61 SSDKVTLAGYCPVSDDFEPCRWEIMPASGSDAPLFRIVF 99

[Close]

BLAST of Spg038112 vs. TAIR 10
Match: AT3G59840.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 72 Blast hits to 72 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 122.5 bits (306), Expect = 1.9e-28
Identity = 58/98 (59.18%), Postives = 71/98 (72.45%), Query Frame = 0


Query: 1  MGLLSWWKGDSAPAESNSKSQSPQKTVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSSS 60
          MG+LSW+ G   P++S +      +        PG+NGA+EVPRP    TVFEFGSV+++
Sbjct: 1  MGILSWFTGSPKPSQSETSKPEMIQMPKSETPAPGMNGAIEVPRP-DRATVFEFGSVAAT 60

Query: 61 SDKVTLAGYCPVSDDLEPCRWEILPASGSEAPLFRVVF 99
           D+VTLAGYCPVSDDLEPCRWEILPA G +AP FRVVF
Sbjct: 61 GDRVTLAGYCPVSDDLEPCRWEILPADGKDAPQFRVVF 97

The following BLAST results are available for this feature:

BLAST of Spg038112 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022972011.1	7.5e-43	90.82	uncharacterized protein LOC111470658 [Cucurbita maxima]	[more]
XP_038886991.1	7.5e-43	90.82	uncharacterized protein LOC120077159 [Benincasa hispida] >XP_038886992.1 unchara...	[more]
XP_022952897.1	2.9e-42	89.80	uncharacterized protein LOC111455443 [Cucurbita moschata] >KAG7011515.1 hypothet...	[more]
XP_023554244.1	1.1e-41	88.78	uncharacterized protein LOC111811567 [Cucurbita pepo subsp. pepo]	[more]
XP_022157409.1	1.0e-39	86.73	uncharacterized protein LOC111024112 [Momordica charantia]	[more]

BLAST of Spg038112 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg038112 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I4S4	3.6e-43	90.82	uncharacterized protein LOC111470658 OS=Cucurbita maxima OX=3661 GN=LOC111470658...	[more]
A0A6J1GLN4	1.4e-42	89.80	uncharacterized protein LOC111455443 OS=Cucurbita moschata OX=3662 GN=LOC1114554...	[more]
A0A6J1DWE4	4.9e-40	86.73	uncharacterized protein LOC111024112 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A5D3E692	1.6e-38	80.81	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CQC7	1.6e-38	80.81	uncharacterized protein LOC103503504 OS=Cucumis melo OX=3656 GN=LOC103503504 PE=...	[more]

BLAST of Spg038112 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G59840.1	1.9e-28	59.18	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..31

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg038112.1	Spg038112.1	mRNA