Spg038089 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGCAACAAGAATTTCAAGTTCGCTTAATTCTGAATTCCACGAACAACGTCATTCTCGTCGCCTGATTCCATCTCTAACTCTTTTTTTCCTCTTACTCACCGCCGCCGTGCTTGGCAGCCCTTCCATGGCTGCCTCGGAGCCGCGGAGACGTCTAAATGAACGTTCCTCGAACAATCCGCCGCGGAAACAGAGGTTGGAGTCGGAATCTGGCGGCCGAAGGCGGAGAGACGATCGTCGATTTGAATCCGCGGCTCTCGAAGTTCTGACCGGACCGAAACCTATTTCGAACAATCCGCCGCGGAAACAGAGGCTTGAGTCGGAAGCTGGCGGCCGGAGGCGGAGAGACGATCGTCAACTTGAATCTACAACTCTCGAAGTTCCGAACGGAACGAGTCATGTTTCGAACAATCATCCGCGGAAACGGATGTCCGACTTGGAATCCGGCGGACGGCGGCGGAGAGAAGGTAGTCGATTTGAATCTGCGGCGCACGAAGTTCCGAGCGGGCCGAATCCGATTTCGAACTAA ATGGCCGCAACAAGAATTTCAAGTTCGCTTAATTCTGAATTCCACGAACAACGTCATTCTCGTCGCCTGATTCCATCTCTAACTCTTTTTTTCCTCTTACTCACCGCCGCCGTGCTTGGCAGCCCTTCCATGGCTGCCTCGGAGCCGCGGAGACGTCTAAATGAACGTTCCTCGAACAATCCGCCGCGGAAACAGAGGTTGGAGTCGGAATCTGGCGGCCGAAGGCGGAGAGACGATCGTCGATTTGAATCCGCGGCTCTCGAAGTTCTGACCGGACCGAAACCTATTTCGAACAATCCGCCGCGGAAACAGAGGCTTGAGTCGGAAGCTGGCGGCCGGAGGCGGAGAGACGATCGTCAACTTGAATCTACAACTCTCGAAGTTCCGAACGGAACGAGTCATGTTTCGAACAATCATCCGCGGAAACGGATGTCCGACTTGGAATCCGGCGGACGGCGGCGGAGAGAAGGTAGTCGATTTGAATCTGCGGCGCACGAAGTTCCGAGCGGGCCGAATCCGATTTCGAACTAA ATGGCCGCAACAAGAATTTCAAGTTCGCTTAATTCTGAATTCCACGAACAACGTCATTCTCGTCGCCTGATTCCATCTCTAACTCTTTTTTTCCTCTTACTCACCGCCGCCGTGCTTGGCAGCCCTTCCATGGCTGCCTCGGAGCCGCGGAGACGTCTAAATGAACGTTCCTCGAACAATCCGCCGCGGAAACAGAGGTTGGAGTCGGAATCTGGCGGCCGAAGGCGGAGAGACGATCGTCGATTTGAATCCGCGGCTCTCGAAGTTCTGACCGGACCGAAACCTATTTCGAACAATCCGCCGCGGAAACAGAGGCTTGAGTCGGAAGCTGGCGGCCGGAGGCGGAGAGACGATCGTCAACTTGAATCTACAACTCTCGAAGTTCCGAACGGAACGAGTCATGTTTCGAACAATCATCCGCGGAAACGGATGTCCGACTTGGAATCCGGCGGACGGCGGCGGAGAGAAGGTAGTCGATTTGAATCTGCGGCGCACGAAGTTCCGAGCGGGCCGAATCCGATTTCGAACTAA MAATRISSSLNSEFHEQRHSRRLIPSLTLFFLLLTAAVLGSPSMAASEPRRRLNERSSNNPPRKQRLESESGGRRRRDDRRFESAALEVLTGPKPISNNPPRKQRLESEAGGRRRRDDRQLESTTLEVPNGTSHVSNNHPRKRMSDLESGGRRRREGSRFESAAHEVPSGPNPISN Homology
BLAST of Spg038089 vs. NCBI nr
Match: XP_022931103.1 (uncharacterized protein LOC111437389 [Cucurbita moschata]) HSP 1 Score: 165.6 bits (418), Expect = 3.8e-37 Identity = 106/176 (60.23%), Postives = 119/176 (67.61%), Query Frame = 0
BLAST of Spg038089 vs. NCBI nr
Match: KAA0068203.1 (hypothetical protein E6C27_scaffold238G001890 [Cucumis melo var. makuwa] >TYK21123.1 hypothetical protein E5676_scaffold392G001030 [Cucumis melo var. makuwa]) HSP 1 Score: 135.2 bits (339), Expect = 5.5e-28 Identity = 112/245 (45.71%), Postives = 126/245 (51.43%), Query Frame = 0
BLAST of Spg038089 vs. NCBI nr
Match: KAE8650847.1 (hypothetical protein Csa_002136 [Cucumis sativus]) HSP 1 Score: 132.5 bits (332), Expect = 3.6e-27 Identity = 99/212 (46.70%), Postives = 113/212 (53.30%), Query Frame = 0
BLAST of Spg038089 vs. ExPASy TrEMBL
Match: A0A6J1EXF7 (uncharacterized protein LOC111437389 OS=Cucurbita moschata OX=3662 GN=LOC111437389 PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 1.8e-37 Identity = 106/176 (60.23%), Postives = 119/176 (67.61%), Query Frame = 0
BLAST of Spg038089 vs. ExPASy TrEMBL
Match: A0A0A0LE33 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G626150 PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 4.1e-29 Identity = 108/237 (45.57%), Postives = 128/237 (54.01%), Query Frame = 0
BLAST of Spg038089 vs. ExPASy TrEMBL
Match: A0A5D3DC24 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G001030 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 2.7e-28 Identity = 112/245 (45.71%), Postives = 126/245 (51.43%), Query Frame = 0
BLAST of Spg038089 vs. TAIR 10
Match: AT4G13195.1 (CLAVATA3/ESR-RELATED 44 ) HSP 1 Score: 41.6 bits (96), Expect = 7.7e-04 Identity = 22/38 (57.89%), Postives = 26/38 (68.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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