Spg038082 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTTTAATAGTTTCGAAAACTGTGAAATCGCCACTGCGATTTATTGAGACTATATGCGATCAGTACTAGCATTTCACTTCCTTCTCCTCCTGCAATCTCGGCGGTTGTGGCCGCCGGAAGTTCCTCAACCGGTGGAATATCCGGCGGGCTATCGAACGACCGGCAGCGTGTGCAAACTTCCCAGTGGCTGCTGATTTCGAGAGGTAAAAATGTGGAATGTCAATGGCTAGGGTTTCTAGGGTTTTGAATCTTATGGTTTTCTTGTTTCACAGTAGCTTCCCTATCTCTTCTAGCTTCTAGAGCTTTGTTGAATGCTAAAATGTTTCTGTGCTGTTGGATGAATCTGTTTGAATCTTGTGAAAACTGTTGAGATGAATCTGTTTGGATGAAATTGTTTCTGGGCCTGTTAGATTAGTTGGGGGATTTTTGTTGGATGGTTGTGTAATGGGAATACTCTGCAATGATCAGAAGGGAATTGCATTTACATTTTGAGATTATTCATAGATTAATCTGTTAAATAAAATGAAAATAGCCAAATCCTTTTGACAGTTTTTTCTTCCAAATCTATGTAATTTTGGTAGGTTTCTCTGAGATTGGAGAAGTATGATTTACTTACATGTAATGAACTTCATTTTGTAGTTGAATTCTTTGCTGCTTTATATGAAATGGAGGAGAAGGTTATACTCTTATTGTGCTATACAGAGGGAGTGACTAACGATGGACCAAATGGTATATCCTTTAGAGGACCTCCATCGAAAGGAATTACATTTCAAGAAGGCAAGGGATTTGATGAGTTGAAAAAGAGGTTGAATGATGAATTTGACACTCTAGGAGGGCTTGGAGAGTTGGAAATAACTTATCGATGTCCTGCAAGTAATGTATCAAAGTCTACTCGATTTGTGCCTCTGCTCCTTCGAAATGATAATGACGTGAAGTTTATGACCACTATTGCCACTCATTTACAAGTTCCTAGTTGTGTAGAGTTGTATATTAAGAGATCTCAAACCTTTGCATCACAAATTCCAACCACAAGTCTAAAGAGAAAGTTGGACGCAAGTGAATTATTAAGTTTTCGTAATCGGCAGAATGCATATGAAGAATTTCCTAGATGGATGAACATGTTAGTACACACAAACAAAGGCACTCAAGTTCAATGGGATTTGATTTCGAGGGGCACGAGTGGTTATTATAAATTTAAACGAGTTTTTTGGTCGTTTGGTGCTGTGATTGAAGGTTTTGCATATTGTAGGCCATTCATACAAGTTGATGGTATCCCGTTATCCAATTACTATCATGATGGGCCTTTGTTGTTTGCCACATCTGTAGATTCAAATGGGTGTATATACCCTCTTGCTTTTGCAATTGTTGAGGAAGAAAGTGATGATAGTTGGTCATGGTTTTTGCGTATCTTGCGAACGCGGGTCACACAACGAGATGGTATATGTCTAATTTCAAATATGCATAAAGGTATTTTGTCGGTTGTAAATGATCCTAACAGCGGTTGGAAAGAGCCAAAAGCACATCATCGCTTATGCCTTCAACATATGGCAACTAGCTTTGATGGAACATATAAAAAGAAAGATCTGAAGGATTTAATGTATCGTGCAGGATGTCAACACCAGAAGCACAAGTATGAAAAATGTATGAATGAGTTAAAACAACTTAATCCAAGGTGCCTAAATTTCTTCACCCATGTAAGTACAGAAAAATGGACACAATCATATGATAATGGATATCGTTATGGTTGGTTGATCACAAACTTAGCTGAATGTATGAACGATGTTCTCGAGGGAGTTAGTAGGTTACCCATTGATGCAATAGTTAAATTAACGTTTCATCGTTGTGTAGAAATCTTCTGTCAACGTAAGGTTGGAATTTGTGTGGCATTGGGTAGGGGAGAGTCATACACAAAGTATGCAATGGAAAAGATAAGCAAGTGGAAGGAAAGAGCCAGTTCGCACACAGTAGTTACATTGGATAACATGAATGAAACTTTTGAAGTGGTCACAGGTAGTCATGGATCAACGTCCCCTAAAGGCCAAAACAAACAAACGGTTAGATTAAAGGATAAAACATGTACTTGCAATAAGTGGCAATCATTTGGGATTCCATGCTCTCATCTAATTGCAGTTTGTTTATATTGCCACATGGACTACTGGAAATTTGTTGAAGACTACTACAAATTGACAGTATACAAATCATGTTATACCCCTTCATTTAATCGTTTTGATCCTTTACCTGACAAATGTTGTTGGCCTAAAATGAACTTTATGATAGAGCATCCAAAGGGGTACTGGATGGGAGAATGCCATAAAGATACTTCACGCACTCGTAACGCGATCGATTGGGTAAAGGTCAGTACAAAAACTCGATGTGGACTATGTAAACAAGAAGGGCATAAGAGACGTTTTTGCCCAAGCCAGAAGAAAGGAGCTTCATCTTGCACAAATAACAAGAGCTAAGACTTACTTCCCCCTTTCATGCATATCAATGTTCATGATGATGTACTTATCATATGATTGTAATGGACTTCTTTTTGTTGTTAACTTTCCACAGGTTTAAAACCTCTGGTTCTTCCTTACACCATTAG ATGGAGGAGAAGGTTATACTCTTATTGTGCTATACAGAGGGAGTGACTAACGATGGACCAAATGGTATATCCTTTAGAGGACCTCCATCGAAAGGAATTACATTTCAAGAAGGCAAGGGATTTGATGAGTTGAAAAAGAGGTTGAATGATGAATTTGACACTCTAGGAGGGCTTGGAGAGTTGGAAATAACTTATCGATGTCCTGCAAGTAATGTATCAAAGTCTACTCGATTTGTGCCTCTGCTCCTTCGAAATGATAATGACGTGAAGTTTATGACCACTATTGCCACTCATTTACAAGTTCCTAGTTGTGTAGAGTTGTATATTAAGAGATCTCAAACCTTTGCATCACAAATTCCAACCACAAGTCTAAAGAGAAAGTTGGACGCAAGTGAATTATTAAGTTTTCGTAATCGGCAGAATGCATATGAAGAATTTCCTAGATGGATGAACATGTTTAAAACCTCTGGTTCTTCCTTACACCATTAG ATGGAGGAGAAGGTTATACTCTTATTGTGCTATACAGAGGGAGTGACTAACGATGGACCAAATGGTATATCCTTTAGAGGACCTCCATCGAAAGGAATTACATTTCAAGAAGGCAAGGGATTTGATGAGTTGAAAAAGAGGTTGAATGATGAATTTGACACTCTAGGAGGGCTTGGAGAGTTGGAAATAACTTATCGATGTCCTGCAAGTAATGTATCAAAGTCTACTCGATTTGTGCCTCTGCTCCTTCGAAATGATAATGACGTGAAGTTTATGACCACTATTGCCACTCATTTACAAGTTCCTAGTTGTGTAGAGTTGTATATTAAGAGATCTCAAACCTTTGCATCACAAATTCCAACCACAAGTCTAAAGAGAAAGTTGGACGCAAGTGAATTATTAAGTTTTCGTAATCGGCAGAATGCATATGAAGAATTTCCTAGATGGATGAACATGTTTAAAACCTCTGGTTCTTCCTTACACCATTAG MEEKVILLLCYTEGVTNDGPNGISFRGPPSKGITFQEGKGFDELKKRLNDEFDTLGGLGELEITYRCPASNVSKSTRFVPLLLRNDNDVKFMTTIATHLQVPSCVELYIKRSQTFASQIPTTSLKRKLDASELLSFRNRQNAYEEFPRWMNMFKTSGSSLHH Homology
BLAST of Spg038082 vs. NCBI nr
Match: PWA56593.1 (DNA-binding WRKY [Artemisia annua]) HSP 1 Score: 66.2 bits (160), Expect = 2.9e-07 Identity = 38/128 (29.69%), Postives = 65/128 (50.78%), Query Frame = 0
BLAST of Spg038082 vs. NCBI nr
Match: RVX08500.1 (hypothetical protein CK203_014195 [Vitis vinifera]) HSP 1 Score: 62.0 bits (149), Expect = 5.5e-06 Identity = 34/117 (29.06%), Postives = 57/117 (48.72%), Query Frame = 0
BLAST of Spg038082 vs. NCBI nr
Match: XP_023765763.1 (uncharacterized protein LOC111914214 [Lactuca sativa]) HSP 1 Score: 60.8 bits (146), Expect = 1.2e-05 Identity = 35/110 (31.82%), Postives = 60/110 (54.55%), Query Frame = 0
BLAST of Spg038082 vs. NCBI nr
Match: XP_042754022.1 (uncharacterized protein LOC111889720 isoform X1 [Lactuca sativa]) HSP 1 Score: 60.8 bits (146), Expect = 1.2e-05 Identity = 34/109 (31.19%), Postives = 57/109 (52.29%), Query Frame = 0
BLAST of Spg038082 vs. NCBI nr
Match: XP_023741643.1 (uncharacterized protein LOC111889720 isoform X2 [Lactuca sativa]) HSP 1 Score: 60.8 bits (146), Expect = 1.2e-05 Identity = 34/109 (31.19%), Postives = 57/109 (52.29%), Query Frame = 0
BLAST of Spg038082 vs. ExPASy TrEMBL
Match: A0A2U1M5P5 (DNA-binding WRKY OS=Artemisia annua OX=35608 GN=CTI12_AA415840 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 1.4e-07 Identity = 38/128 (29.69%), Postives = 65/128 (50.78%), Query Frame = 0
BLAST of Spg038082 vs. ExPASy TrEMBL
Match: A0A438JHT2 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_014195 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 2.6e-06 Identity = 34/117 (29.06%), Postives = 57/117 (48.72%), Query Frame = 0
BLAST of Spg038082 vs. ExPASy TrEMBL
Match: A0A2U1NKX3 (MuDR family transposase OS=Artemisia annua OX=35608 GN=CTI12_AA253070 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 1.3e-05 Identity = 32/109 (29.36%), Postives = 57/109 (52.29%), Query Frame = 0
BLAST of Spg038082 vs. ExPASy TrEMBL
Match: A0A2U1Q3T2 (MuDR family transposase OS=Artemisia annua OX=35608 GN=CTI12_AA052360 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 2.2e-05 Identity = 35/114 (30.70%), Postives = 57/114 (50.00%), Query Frame = 0
BLAST of Spg038082 vs. ExPASy TrEMBL
Match: A0A438HFK5 (SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_044939 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 1.4e-04 Identity = 27/110 (24.55%), Postives = 57/110 (51.82%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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