Spg038071 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg038071
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	PH domain-containing protein
Location	scaffold12: 40175207 .. 40177807 (-)
RNA-Seq Expression	Spg038071
Synteny	Spg038071

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTGCTTCAGGTTAATCATAGTTGTTTCAATCGCAGCCATCCTTCTTTCCAATCCTTCTTGAAGTAAGGATGCACCATTGAATATTGAGATCAACATCTTGTAACCTAGGATTGAAATGTTGATGTTGATCAGTTGATGAAATGTGGAGGTCTCAACTTTGCAGAAATATCAATATTGACGGATATTTTTGGAAAGATTTTGGGAACTGAGAAACTTATAAAAAGTATTTCAATTAATAAATAAGTATTTTACACTTCTTAAATAAGTTAAAATCTTATTGTTAGTAATTATATTCATATGGGTGATTTTTTGTTGATATTTTATATATCTCATTGATATTTATTTGATCTATTAGAAATATCGGTTGACTCTTTGAATACTCTGATTTACGGATATATTAATATGTCAATGGATATTTTGTAACTTCCCACAAGCAAGAATTTAGTGTTCCCTATCTTGCGGAGCTTTTCCCTTTAACATCCAAAGCTAAGGGTTGAAAGTGGCCTCTGATACCACTTTGGTGCAGAGAAATAAAGATATTTTTCACAATATTCTGATTACAATAGAATTGGTGGGCTTTTACATGATAAGTTGATTGTTCCCCTTGTCATGATTGTTAACACGTCTATTTATGTCTTAAACAGGTAATTAATTTTTATTTATTTATTTTTTATTTTGAACTTGAAAGAGAACTTATCTGATTGTTTGAACTTTGACTTTAGGTTACAAGGTTTTTATGTCATTAAATACGTTATTCAAATCAGGTTCCATGGAGCAGACTTGGTAAAGATCCCGTCATAGTGTATTTAGATAGAATTTTCATACTAGCTGAGCCTGCTACGGAGGTTGAAGGACGTAGTGAAGATGCTATCCAAGAGGTCAAGAAAACTAGAGTTCGGGTAAGATTCTTTTTTTGGTGAAGAAATCATAATACCAGATAGATGTCTAATTTTTTCACTCTTAATATGGAGCAGGAAATGGAAATCAAACTATTGGAGAGGATGCAGCGAACAAAGACAGAAATGGTATGTCTACTGTAAGCACTATGGGTCATTTCGAATCCTTCTTATATGGTGGTTGCTTTAAAGTTTTTACATCAATAATGTAAAAGGGATGTAGGTTTTTTCCTATATATCTGAATCGAGTTTTCCCCAATAACCGCCCATGAATTCCAATGTGCATGGGCTAAACCATTAAGGTATTGACTTTTCATGGTAAATATGTTGAAGTTGCATTGCACTTGTGAGACACAGGGCCATCGTGCTTAGATATTGTTGAGTATACCTTGAAAACCTGCCCCTTTTTTCAAATATAAAAAAAAAAAAAAAGAAAAAGAAGAAAAGAAAGAATAAGTAGAAACAAATCATTTATCTAATGTAGGAAACTCTGTCCCTTTATTTTTTCAGACAGTTGCACAGGAAGTCACACCCAAGTCTTCCAGGATATTGGTGTTCAGACTTTAGCCATTTCTTCTGCATCTCTAGCTTTCTTAACTCTGGTTACAGATATTAAAAGAAATAATGGTTAACTTAAATAGCTGCTGCTTTTTAAATTTTCCATTTTTTTTTTGCAAGAACATAAATAGCATTTCTTATGGGTAGTTAGAACTGAATCTTTTGAACATATTTCATTATTTCTTTTCCATCAGCATACTGAATGGCTTTCATCTATTATTAAAAAAAATAAATTATACTATTCTAAACCAAAATACAAATCTTCAACTGCATGTATGTTTTGTTTATTGAGGTGCAAAAAACTATATTGACATTAAGAGAATATCAGAAGTAACTAGACGAGGAGTTTTGAACAAGAAAACTCAAAATATGGTTCAACATTAAACAGAATAAGGGGATATTTCCAAAGTATCTGCAAAATATCTGCAAAAATGGCTTGTCATTATTCTGTTGATGAAGATTAAAAAATATCCAAATGATTATTTCACTTTTTAATGATGTGCAAAAAAATTAAAAGTTTTTTGTGTGCCTGGTGTCTGATTGAACTTATCTTCTAGGATGAAATGTGCTTGGGCTTGATGAGGCGATTGGTTTAAGTTCGGTTCTTTTTCTAATGTTTGATGCTAGTGCAACTATATGTGAAACGTTACTTTACATCCTTATATTTTTAGAGCCCGAAGTTCAGAATTCCTGTTTTCCTTCCTCTTGATCGATATTTTTAGTGCAACCATACGTGAAATATTTTTGTTTTGCATGACTTTAATTCTCTTTACCCTTTCTTCTGGATATTTTCAAGAATAATTCGTGGTTGGGATCACTGATCGGCACAATAATTGGAAATTTAAAGCTTTCAATATCAAACATTCACATCAGATACGAGGATATTGAAAGGTAAAAATAACGTCTCTACCTCATGTGCTTGATTGGTTTGTTGAATAGCATAAGTTTCCATTTGCAGCAATCCTGGTCATCCATTTGCAGCTGGTGTAAGTCTAGAAAAACTTTCAGCTGTTACAGTTGATGATGATGGGAAGGAGACTTTTATAACAGGTGGTGCACTTGATCGTATTCAGAAGGTTTGCTTCGCTCATTTCATTTATTTAATGTCATTTTCCCCCTTCCCTCCTCTGTACCAAACATGA

mRNA sequence

ATGGACTGCTTCAGACTTGGTAAAGATCCCGTCATAGTGTATTTAGATAGAATTTTCATACTAGCTGAGCCTGCTACGGAGGTTGAAGGACGTAGTGAAGATGCTATCCAAGAGGTCAAGAAAACTAGAGTTCGGGAAATGGAAATCAAACTATTGGAGAGGATGCAGCGAACAAAGACAGAAATGGTATGTCTACTTTGCACAGGAAGTCACACCCAAGTCTTCCAGGATATTGGTGTTCAGACTTTAGCCATTTCTTCTGCATCTCTAGCTTTCTTAACTCTGAATAATTCGTGGTTGGGATCACTGATCGGCACAATAATTGGAAATTTAAAGCTTTCAATATCAAACATTCACATCAGATACGAGGATATTGAAAGCAATCCTGGTCATCCATTTGCAGCTGGTGTAAGTCTAGAAAAACTTTCAGCTGTTACAGTTGATGATGATGGGAAGGAGACTTTTATAACAGGTGGTGCACTTGATCGTATTCAGAAGGTTTGCTTCGCTCATTTCATTTATTTAATGTCATTTTCCCCCTTCCCTCCTCTGTACCAAACATGA

Coding sequence (CDS)

ATGGACTGCTTCAGACTTGGTAAAGATCCCGTCATAGTGTATTTAGATAGAATTTTCATACTAGCTGAGCCTGCTACGGAGGTTGAAGGACGTAGTGAAGATGCTATCCAAGAGGTCAAGAAAACTAGAGTTCGGGAAATGGAAATCAAACTATTGGAGAGGATGCAGCGAACAAAGACAGAAATGGTATGTCTACTTTGCACAGGAAGTCACACCCAAGTCTTCCAGGATATTGGTGTTCAGACTTTAGCCATTTCTTCTGCATCTCTAGCTTTCTTAACTCTGAATAATTCGTGGTTGGGATCACTGATCGGCACAATAATTGGAAATTTAAAGCTTTCAATATCAAACATTCACATCAGATACGAGGATATTGAAAGCAATCCTGGTCATCCATTTGCAGCTGGTGTAAGTCTAGAAAAACTTTCAGCTGTTACAGTTGATGATGATGGGAAGGAGACTTTTATAACAGGTGGTGCACTTGATCGTATTCAGAAGGTTTGCTTCGCTCATTTCATTTATTTAATGTCATTTTCCCCCTTCCCTCCTCTGTACCAAACATGA

Protein sequence

MDCFRLGKDPVIVYLDRIFILAEPATEVEGRSEDAIQEVKKTRVREMEIKLLERMQRTKTEMVCLLCTGSHTQVFQDIGVQTLAISSASLAFLTLNNSWLGSLIGTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQKVCFAHFIYLMSFSPFPPLYQT

Homology

[Close]

BLAST of Spg038071 vs. NCBI nr
Match: XP_038888106.1 (uncharacterized protein LOC120078006 isoform X2 [Benincasa hispida])

HSP 1 Score: 228.8 bits (582), Expect = 3.9e-56
Identity = 125/163 (76.69%), Postives = 127/163 (77.91%), Query Frame = 0


Query: 5   RLGKDPVIVYLDRIFILAEPATEVEGRSEDAIQEVKKTRVREMEIKLLERMQRTKTEMVC 64
           RLG+DPVIVYLDRIF+LAEPATEVEG SED IQEVKKTRVREMEIKLLERMQRTKTEM  
Sbjct: 72  RLGQDPVIVYLDRIFLLAEPATEVEGHSEDGIQEVKKTRVREMEIKLLERMQRTKTEM-- 131

Query: 65  LLCTGSHTQVFQDIGVQTLAISSASLAFLTLNNSWLGSLIGTIIGNLKLSISNIHIRYED 124
                                          NNSWLGSLI TIIGNLKLSISNIHIRYED
Sbjct: 132 -------------------------------NNSWLGSLISTIIGNLKLSISNIHIRYED 191

Query: 125 IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQKV 168
           IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQKV
Sbjct: 192 IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQKV 201

[Close]

BLAST of Spg038071 vs. NCBI nr
Match: XP_038888105.1 (uncharacterized protein LOC120078006 isoform X1 [Benincasa hispida])

HSP 1 Score: 228.8 bits (582), Expect = 3.9e-56
Identity = 125/163 (76.69%), Postives = 127/163 (77.91%), Query Frame = 0


Query: 5   RLGKDPVIVYLDRIFILAEPATEVEGRSEDAIQEVKKTRVREMEIKLLERMQRTKTEMVC 64
           RLG+DPVIVYLDRIF+LAEPATEVEG SED IQEVKKTRVREMEIKLLERMQRTKTEM  
Sbjct: 72  RLGQDPVIVYLDRIFLLAEPATEVEGHSEDGIQEVKKTRVREMEIKLLERMQRTKTEM-- 131

Query: 65  LLCTGSHTQVFQDIGVQTLAISSASLAFLTLNNSWLGSLIGTIIGNLKLSISNIHIRYED 124
                                          NNSWLGSLI TIIGNLKLSISNIHIRYED
Sbjct: 132 -------------------------------NNSWLGSLISTIIGNLKLSISNIHIRYED 191

Query: 125 IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQKV 168
           IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQKV
Sbjct: 192 IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQKV 201

[Close]

BLAST of Spg038071 vs. NCBI nr
Match: XP_008465914.1 (PREDICTED: uncharacterized protein LOC103503494 isoform X1 [Cucumis melo])

HSP 1 Score: 225.7 bits (574), Expect = 3.3e-55
Identity = 122/162 (75.31%), Postives = 126/162 (77.78%), Query Frame = 0


Query: 5   RLGKDPVIVYLDRIFILAEPATEVEGRSEDAIQEVKKTRVREMEIKLLERMQRTKTEMVC 64
           RLG+DPVIVYLDRIF+LAEPATEVEG SED IQEVKKTR+REMEIKLLERMQRTKTEM  
Sbjct: 72  RLGQDPVIVYLDRIFLLAEPATEVEGHSEDVIQEVKKTRLREMEIKLLERMQRTKTEM-- 131

Query: 65  LLCTGSHTQVFQDIGVQTLAISSASLAFLTLNNSWLGSLIGTIIGNLKLSISNIHIRYED 124
                                          NNSWLGSL+ TIIGNLKLSISNIHIRYED
Sbjct: 132 -------------------------------NNSWLGSLVSTIIGNLKLSISNIHIRYED 191

Query: 125 IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQK 167
           IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQK
Sbjct: 192 IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQK 200

[Close]

BLAST of Spg038071 vs. NCBI nr
Match: TYK31119.1 (uncharacterized protein E5676_scaffold455G003970 [Cucumis melo var. makuwa])

HSP 1 Score: 225.7 bits (574), Expect = 3.3e-55
Identity = 122/162 (75.31%), Postives = 126/162 (77.78%), Query Frame = 0


Query: 5   RLGKDPVIVYLDRIFILAEPATEVEGRSEDAIQEVKKTRVREMEIKLLERMQRTKTEMVC 64
           RLG+DPVIVYLDRIF+LAEPATEVEG SED IQEVKKTR+REMEIKLLERMQRTKTEM  
Sbjct: 72  RLGQDPVIVYLDRIFLLAEPATEVEGHSEDVIQEVKKTRLREMEIKLLERMQRTKTEM-- 131

Query: 65  LLCTGSHTQVFQDIGVQTLAISSASLAFLTLNNSWLGSLIGTIIGNLKLSISNIHIRYED 124
                                          NNSWLGSL+ TIIGNLKLSISNIHIRYED
Sbjct: 132 -------------------------------NNSWLGSLVSTIIGNLKLSISNIHIRYED 191

Query: 125 IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQK 167
           IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQK
Sbjct: 192 IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQK 200

[Close]

BLAST of Spg038071 vs. NCBI nr
Match: XP_011652678.1 (uncharacterized protein LOC101212417 [Cucumis sativus])

HSP 1 Score: 225.7 bits (574), Expect = 3.3e-55
Identity = 122/162 (75.31%), Postives = 126/162 (77.78%), Query Frame = 0


Query: 5   RLGKDPVIVYLDRIFILAEPATEVEGRSEDAIQEVKKTRVREMEIKLLERMQRTKTEMVC 64
           RLG+DPVIVYLDRIF+LAEPATEVEG SED IQEVKKTRVREME+KLLERMQRTKTEM  
Sbjct: 72  RLGQDPVIVYLDRIFLLAEPATEVEGHSEDGIQEVKKTRVREMEMKLLERMQRTKTEM-- 131

Query: 65  LLCTGSHTQVFQDIGVQTLAISSASLAFLTLNNSWLGSLIGTIIGNLKLSISNIHIRYED 124
                                          NNSWLGSL+ TIIGNLKLSISNIHIRYED
Sbjct: 132 -------------------------------NNSWLGSLVSTIIGNLKLSISNIHIRYED 191

Query: 125 IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQK 167
           IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQK
Sbjct: 192 IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQK 200

[Close]

BLAST of Spg038071 vs. ExPASy Swiss-Prot
Match: Q54KX3 (Putative vacuolar protein sorting-associated protein 13F OS=Dictyostelium discoideum OX=44689 GN=vps13F PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.5e-05
Identity = 24/61 (39.34%), Postives = 40/61 (65.57%), Query Frame = 0


Query: 96  NNSWLGSLIGTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF 155
           ++S+   L   I+ NL++ I N+HIR+ED  +NP  P+  GV+LE L A + +++ K +F
Sbjct: 295 SSSFAEKLRNKIVDNLQIMIYNVHIRFEDSVTNPTTPYCFGVTLEHLLAQSSNEEWKPSF 354

Query: 156 I 157
           I
Sbjct: 355 I 355

[Close]

BLAST of Spg038071 vs. ExPASy Swiss-Prot
Match: Q07878 (Vacuolar protein sorting-associated protein 13 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=VPS13 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.2e-04
Identity = 41/155 (26.45%), Postives = 73/155 (47.10%), Query Frame = 0


Query: 6   LGKDPVIVYLDRIFILAEPATEVEGRSEDAIQ---EVKKTRVREMEIKLLERMQRTKTEM 65
           L   PV + ++  ++L  P +E     E+ I+    +K  +V E E+    R+  T++E 
Sbjct: 73  LKNKPVKIIIEDCYLLCSPRSEDHENDEEMIKRAFRLKMRKVSEWELTNQARILSTQSEN 132

Query: 66  VCLLCTGSHTQVFQDIGVQTLAISSASLAFLTLNNSWLGSLIGTIIGNLKLSISNIHIRY 125
                                   ++S +    N  ++ SL   II NL+++I NIH+RY
Sbjct: 133 -----------------------KTSSSSSEKNNAGFMQSLTTKIIDNLQVTIKNIHLRY 192

Query: 126 EDIES-NPGHPFAAGVSLEKLSAVTVDDDGKETFI 157
           ED++      P + G++L +LSAV+ D +   +FI
Sbjct: 193 EDMDGIFTTGPSSVGLTLNELSAVSTDSNWAPSFI 204

[Close]

BLAST of Spg038071 vs. ExPASy Swiss-Prot
Match: A1Z713 (Vacuolar protein sorting-associated protein 13 OS=Drosophila melanogaster OX=7227 GN=Vps13 PE=1 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 2.7e-04
Identity = 39/152 (25.66%), Postives = 70/152 (46.05%), Query Frame = 0


Query: 6   LGKDPVIVYLDRIFILAEPATEVEGRSEDAIQEVK-KTRVREMEIKLLERMQRTKTEMVC 65
           L   PVIV ++ +++L  P   V+  +E   +E K +  +++  +  LE  ++ + EM  
Sbjct: 74  LYSQPVIVNIEDLYVLVSPNNNVQYNAE---KEAKYEMDLKKAALDALEAARKKELEM-- 133

Query: 66  LLCTGSHTQVFQDIGVQTLAISSASLAFLTLNNSWLGSLIGTIIGNLKLSISNIHIRYED 125
                   Q   D G                   +   L   I+ NL++ I+N+H+RYED
Sbjct: 134 -------DQPKADAG-------------------FAEKLTAQIVNNLQVQITNVHLRYED 193

Query: 126 IESNPGHPFAAGVSLEKLSAVTVDDDGKETFI 157
             +  G PF+ G+SL +L   T D D ++ ++
Sbjct: 194 -TTTTGSPFSFGISLHELELYTTDCDWEKCYM 193

[Close]

BLAST of Spg038071 vs. ExPASy Swiss-Prot
Match: Q5THJ4 (Vacuolar protein sorting-associated protein 13D OS=Homo sapiens OX=9606 GN=VPS13D PE=1 SV=2)

HSP 1 Score: 46.2 bits (108), Expect = 4.7e-04
Identity = 17/42 (40.48%), Postives = 31/42 (73.81%), Query Frame = 0


Query: 102 SLIGTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLS 144
           S++  I+ N++L I ++H+R+ED  +NP HPFA G+ ++ +S
Sbjct: 139 SVVTRIVENIELKIQDVHLRFEDGVTNPSHPFAFGICIKNVS 180

[Close]

BLAST of Spg038071 vs. ExPASy Swiss-Prot
Match: Q96RL7 (Vacuolar protein sorting-associated protein 13A OS=Homo sapiens OX=9606 GN=VPS13A PE=1 SV=2)

HSP 1 Score: 45.8 bits (107), Expect = 6.1e-04
Identity = 40/139 (28.78%), Postives = 68/139 (48.92%), Query Frame = 0


Query: 10  PVIVYLDRIFILAEPATEVEGRSEDAIQEVKKTRVREMEIKLLERMQRTKTEMVCLLCTG 69
           PV   L+ I++L  P++ ++    D ++E K  ++ E + + L+R++  K ++V      
Sbjct: 78  PVEAVLEEIYLLIVPSSRIK---YDPLKEEK--QLMEAKQQELKRIEEAKQKVV---DQE 137

Query: 70  SHTQVFQDIGVQTLAISSASLAFLTLNNSWLGSLIGTIIGNLKLSISNIHIRYEDIESNP 129
            H    QD                    ++   L+  II NL++ IS+IHIRYED  +N 
Sbjct: 138 QHLPEKQD--------------------TFAEKLVTQIIKNLQVKISSIHIRYEDDITNR 188

Query: 130 GHPFAAGVSLEKLSAVTVD 149
             P + G+SL+ LS  T D
Sbjct: 198 DKPLSFGISLQNLSMQTTD 188

[Close]

BLAST of Spg038071 vs. ExPASy TrEMBL
Match: A0A5D3E5L1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003970 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.6e-55
Identity = 122/162 (75.31%), Postives = 126/162 (77.78%), Query Frame = 0


Query: 5   RLGKDPVIVYLDRIFILAEPATEVEGRSEDAIQEVKKTRVREMEIKLLERMQRTKTEMVC 64
           RLG+DPVIVYLDRIF+LAEPATEVEG SED IQEVKKTR+REMEIKLLERMQRTKTEM  
Sbjct: 72  RLGQDPVIVYLDRIFLLAEPATEVEGHSEDVIQEVKKTRLREMEIKLLERMQRTKTEM-- 131

Query: 65  LLCTGSHTQVFQDIGVQTLAISSASLAFLTLNNSWLGSLIGTIIGNLKLSISNIHIRYED 124
                                          NNSWLGSL+ TIIGNLKLSISNIHIRYED
Sbjct: 132 -------------------------------NNSWLGSLVSTIIGNLKLSISNIHIRYED 191

Query: 125 IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQK 167
           IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQK
Sbjct: 192 IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQK 200

[Close]

BLAST of Spg038071 vs. ExPASy TrEMBL
Match: A0A0A0LF94 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G911780 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.6e-55
Identity = 122/162 (75.31%), Postives = 126/162 (77.78%), Query Frame = 0


Query: 5   RLGKDPVIVYLDRIFILAEPATEVEGRSEDAIQEVKKTRVREMEIKLLERMQRTKTEMVC 64
           RLG+DPVIVYLDRIF+LAEPATEVEG SED IQEVKKTRVREME+KLLERMQRTKTEM  
Sbjct: 72  RLGQDPVIVYLDRIFLLAEPATEVEGHSEDGIQEVKKTRVREMEMKLLERMQRTKTEM-- 131

Query: 65  LLCTGSHTQVFQDIGVQTLAISSASLAFLTLNNSWLGSLIGTIIGNLKLSISNIHIRYED 124
                                          NNSWLGSL+ TIIGNLKLSISNIHIRYED
Sbjct: 132 -------------------------------NNSWLGSLVSTIIGNLKLSISNIHIRYED 191

Query: 125 IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQK 167
           IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQK
Sbjct: 192 IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQK 200

[Close]

BLAST of Spg038071 vs. ExPASy TrEMBL
Match: A0A1S3CPY5 (uncharacterized protein LOC103503494 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503494 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.6e-55
Identity = 122/162 (75.31%), Postives = 126/162 (77.78%), Query Frame = 0


Query: 5   RLGKDPVIVYLDRIFILAEPATEVEGRSEDAIQEVKKTRVREMEIKLLERMQRTKTEMVC 64
           RLG+DPVIVYLDRIF+LAEPATEVEG SED IQEVKKTR+REMEIKLLERMQRTKTEM  
Sbjct: 72  RLGQDPVIVYLDRIFLLAEPATEVEGHSEDVIQEVKKTRLREMEIKLLERMQRTKTEM-- 131

Query: 65  LLCTGSHTQVFQDIGVQTLAISSASLAFLTLNNSWLGSLIGTIIGNLKLSISNIHIRYED 124
                                          NNSWLGSL+ TIIGNLKLSISNIHIRYED
Sbjct: 132 -------------------------------NNSWLGSLVSTIIGNLKLSISNIHIRYED 191

Query: 125 IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQK 167
           IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQK
Sbjct: 192 IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQK 200

[Close]

BLAST of Spg038071 vs. ExPASy TrEMBL
Match: A0A1S3CQB7 (uncharacterized protein LOC103503494 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503494 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.6e-55
Identity = 122/162 (75.31%), Postives = 126/162 (77.78%), Query Frame = 0


Query: 5   RLGKDPVIVYLDRIFILAEPATEVEGRSEDAIQEVKKTRVREMEIKLLERMQRTKTEMVC 64
           RLG+DPVIVYLDRIF+LAEPATEVEG SED IQEVKKTR+REMEIKLLERMQRTKTEM  
Sbjct: 72  RLGQDPVIVYLDRIFLLAEPATEVEGHSEDVIQEVKKTRLREMEIKLLERMQRTKTEM-- 131

Query: 65  LLCTGSHTQVFQDIGVQTLAISSASLAFLTLNNSWLGSLIGTIIGNLKLSISNIHIRYED 124
                                          NNSWLGSL+ TIIGNLKLSISNIHIRYED
Sbjct: 132 -------------------------------NNSWLGSLVSTIIGNLKLSISNIHIRYED 191

Query: 125 IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQK 167
           IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQK
Sbjct: 192 IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQK 200

[Close]

BLAST of Spg038071 vs. ExPASy TrEMBL
Match: A0A6J1DYN3 (uncharacterized protein LOC111024248 OS=Momordica charantia OX=3673 GN=LOC111024248 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 5.1e-54
Identity = 117/162 (72.22%), Postives = 126/162 (77.78%), Query Frame = 0


Query: 5   RLGKDPVIVYLDRIFILAEPATEVEGRSEDAIQEVKKTRVREMEIKLLERMQRTKTEMVC 64
           RLG+DPVIVYLDRIF+LAEPATE++G SEDAIQEVKKTR+REMEIKLLERMQRTKTEM  
Sbjct: 72  RLGQDPVIVYLDRIFLLAEPATEIQGCSEDAIQEVKKTRIREMEIKLLERMQRTKTEM-- 131

Query: 65  LLCTGSHTQVFQDIGVQTLAISSASLAFLTLNNSWLGSLIGTIIGNLKLSISNIHIRYED 124
                                          NNSWLGSLI TIIGNLKLSISN+HIRYED
Sbjct: 132 -------------------------------NNSWLGSLISTIIGNLKLSISNVHIRYED 191

Query: 125 IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQK 167
           IESNPGHPFAAG+SLEKLSAVT+D+DG ETFITGGALDRIQK
Sbjct: 192 IESNPGHPFAAGISLEKLSAVTIDNDGNETFITGGALDRIQK 200

[Close]

BLAST of Spg038071 vs. TAIR 10
Match: AT4G17140.1 (pleckstrin homology (PH) domain-containing protein )

HSP 1 Score: 189.9 bits (481), Expect = 1.9e-48
Identity = 98/162 (60.49%), Postives = 117/162 (72.22%), Query Frame = 0


Query: 5   RLGKDPVIVYLDRIFILAEPATEVEGRSEDAIQEVKKTRVREMEIKLLERMQRTKTEMVC 64
           RLG++PV+VYLDRIF+LAEPAT+VEG SED+IQE K+  +REME KL+ER +R +TEM  
Sbjct: 72  RLGQEPVVVYLDRIFVLAEPATDVEGLSEDSIQEAKRNLIREMETKLVERARRLQTEM-- 131

Query: 65  LLCTGSHTQVFQDIGVQTLAISSASLAFLTLNNSWLGSLIGTIIGNLKLSISNIHIRYED 124
                                          N SW+GS+I TI+GNLKLSISNIHIRYED
Sbjct: 132 -------------------------------NKSWMGSVINTIVGNLKLSISNIHIRYED 191

Query: 125 IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQK 167
           +ESNPGHPF+AGV+LEKLSAVT+D+ GKETFITGG LD IQK
Sbjct: 192 LESNPGHPFSAGVTLEKLSAVTIDESGKETFITGGTLDSIQK 200

[Close]

BLAST of Spg038071 vs. TAIR 10
Match: AT4G17140.2 (pleckstrin homology (PH) domain-containing protein )

HSP 1 Score: 189.9 bits (481), Expect = 1.9e-48
Identity = 98/162 (60.49%), Postives = 117/162 (72.22%), Query Frame = 0


Query: 5   RLGKDPVIVYLDRIFILAEPATEVEGRSEDAIQEVKKTRVREMEIKLLERMQRTKTEMVC 64
           RLG++PV+VYLDRIF+LAEPAT+VEG SED+IQE K+  +REME KL+ER +R +TEM  
Sbjct: 72  RLGQEPVVVYLDRIFVLAEPATDVEGLSEDSIQEAKRNLIREMETKLVERARRLQTEM-- 131

Query: 65  LLCTGSHTQVFQDIGVQTLAISSASLAFLTLNNSWLGSLIGTIIGNLKLSISNIHIRYED 124
                                          N SW+GS+I TI+GNLKLSISNIHIRYED
Sbjct: 132 -------------------------------NKSWMGSVINTIVGNLKLSISNIHIRYED 191

Query: 125 IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQK 167
           +ESNPGHPF+AGV+LEKLSAVT+D+ GKETFITGG LD IQK
Sbjct: 192 LESNPGHPFSAGVTLEKLSAVTIDESGKETFITGGTLDSIQK 200

[Close]

BLAST of Spg038071 vs. TAIR 10
Match: AT4G17140.3 (pleckstrin homology (PH) domain-containing protein )

HSP 1 Score: 189.9 bits (481), Expect = 1.9e-48
Identity = 98/162 (60.49%), Postives = 117/162 (72.22%), Query Frame = 0


Query: 5   RLGKDPVIVYLDRIFILAEPATEVEGRSEDAIQEVKKTRVREMEIKLLERMQRTKTEMVC 64
           RLG++PV+VYLDRIF+LAEPAT+VEG SED+IQE K+  +REME KL+ER +R +TEM  
Sbjct: 72  RLGQEPVVVYLDRIFVLAEPATDVEGLSEDSIQEAKRNLIREMETKLVERARRLQTEM-- 131

Query: 65  LLCTGSHTQVFQDIGVQTLAISSASLAFLTLNNSWLGSLIGTIIGNLKLSISNIHIRYED 124
                                          N SW+GS+I TI+GNLKLSISNIHIRYED
Sbjct: 132 -------------------------------NKSWMGSVINTIVGNLKLSISNIHIRYED 191

Query: 125 IESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQK 167
           +ESNPGHPF+AGV+LEKLSAVT+D+ GKETFITGG LD IQK
Sbjct: 192 LESNPGHPFSAGVTLEKLSAVTIDESGKETFITGGTLDSIQK 200

[Close]

BLAST of Spg038071 vs. TAIR 10
Match: AT1G48090.1 (calcium-dependent lipid-binding family protein )

HSP 1 Score: 133.7 bits (335), Expect = 1.6e-31
Identity = 75/164 (45.73%), Postives = 100/164 (60.98%), Query Frame = 0


Query: 6   LGKDPVIVYLDRIFILAEPATE---VEGRSEDAIQEVKKTRVREMEIKLLERMQRTKTEM 65
           LGK+PVIV +DR+F+LA PA +   ++    + + E K  ++ E E   LE   ++K   
Sbjct: 92  LGKEPVIVLIDRVFVLAYPAPDDRTLKEEDREKLLETKLQQIEEAETATLEARAKSK--- 151

Query: 66  VCLLCTGSHTQVFQDIGVQTLAISSASLAFLTLNNSWLGSLIGTIIGNLKLSISNIHIRY 125
                 GS  Q                       NSWLGS+I TIIGNLK+SISN+HIRY
Sbjct: 152 -----LGSPPQ----------------------GNSWLGSIIATIIGNLKVSISNVHIRY 211

Query: 126 EDIESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQK 167
           ED  SNPGHPFAAG++L KL+AVT+D++G ETF T GALD+++K
Sbjct: 212 EDSTSNPGHPFAAGITLAKLAAVTMDEEGNETFDTSGALDKLRK 225

The following BLAST results are available for this feature:

BLAST of Spg038071 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888106.1	3.9e-56	76.69	uncharacterized protein LOC120078006 isoform X2 [Benincasa hispida]	[more]
XP_038888105.1	3.9e-56	76.69	uncharacterized protein LOC120078006 isoform X1 [Benincasa hispida]	[more]
XP_008465914.1	3.3e-55	75.31	PREDICTED: uncharacterized protein LOC103503494 isoform X1 [Cucumis melo]	[more]
TYK31119.1	3.3e-55	75.31	uncharacterized protein E5676_scaffold455G003970 [Cucumis melo var. makuwa]	[more]
XP_011652678.1	3.3e-55	75.31	uncharacterized protein LOC101212417 [Cucumis sativus]	[more]

BLAST of Spg038071 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54KX3	2.5e-05	39.34	Putative vacuolar protein sorting-associated protein 13F OS=Dictyostelium discoi...	[more]
Q07878	1.2e-04	26.45	Vacuolar protein sorting-associated protein 13 OS=Saccharomyces cerevisiae (stra...	[more]
A1Z713	2.7e-04	25.66	Vacuolar protein sorting-associated protein 13 OS=Drosophila melanogaster OX=722...	[more]
Q5THJ4	4.7e-04	40.48	Vacuolar protein sorting-associated protein 13D OS=Homo sapiens OX=9606 GN=VPS13...	[more]
Q96RL7	6.1e-04	28.78	Vacuolar protein sorting-associated protein 13A OS=Homo sapiens OX=9606 GN=VPS13...	[more]

BLAST of Spg038071 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E5L1	1.6e-55	75.31	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LF94	1.6e-55	75.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G911780 PE=4 SV=1	[more]
A0A1S3CPY5	1.6e-55	75.31	uncharacterized protein LOC103503494 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CQB7	1.6e-55	75.31	uncharacterized protein LOC103503494 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1DYN3	5.1e-54	72.22	uncharacterized protein LOC111024248 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]

BLAST of Spg038071 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17140.1	1.9e-48	60.49	pleckstrin homology (PH) domain-containing protein	[more]
AT4G17140.2	1.9e-48	60.49	pleckstrin homology (PH) domain-containing protein	[more]
AT4G17140.3	1.9e-48	60.49	pleckstrin homology (PH) domain-containing protein	[more]
AT1G48090.1	1.6e-31	45.73	calcium-dependent lipid-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR031646	Vacuolar protein sorting-associated protein 13, second N-terminal domain	PFAM	PF16908	VPS13	coord: 99..166 e-value: 7.1E-21 score: 75.1
None	No IPR available	PANTHER	PTHR45523:SF2	SUBFAMILY NOT NAMED	coord: 5..167
None	No IPR available	PANTHER	PTHR45523	TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED	coord: 5..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg038071.1	Spg038071.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0110165	cellular anatomical entity