Spg038063 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg038063
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	DEAD-box ATP-dependent RNA helicase 10-like
Location	scaffold12: 43214097 .. 43223549 (+)
RNA-Seq Expression	Spg038063
Synteny	Spg038063

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCTTCTTCACGCCGTCTCCTCCTCCGTTTCAGCAGCTCAGTGTCGCCGCTGCCTCTCTTCCCTTCACTGCCACCGCCGCCGTCGTCCTTCTTCCGTTCGTGCCGCCGCCAGCTTCGTCGCCTCCCTCCTGGCGGTTTTGCACTGATTTTCTACTCGTTACTGGTATTCTCCCAATCTCCATCTATGTCTTTCTTCTCGCTTGAAAATTACAATTCTCTCCCTCAATTAACCAATACAACAATGATACTTTGAATATGTGGAAATAAGAGCACGAATCCACCCATATTTTTTAATTGGAACACGAATCAATGAAGTGGTAATAGTTCAATTAAATGAGTAGAGACATAAGTGCATCAAACCTGATTAAAAACATGAGTACAGACATATCTTTCGATTATTCATCAGGAGTAATAGTTCAATTAAATGGTAATGAACCAAGAACTCTGAATGTGGATTATTTCTCTTCTGCAACATAAGCTTCAACTACTAAATTTCATTAGCTAAAAAAACCCCCTAAATTTCAGAAATCCAGACAAAAGGCACACAATTTACAATAAAAGGGTAAACTTGACACAAAACTTTATCTCTTACTGTGGCTGTTAAATATACTATGATGGATAGATAGATTGATAGATACTAATTCTTTACCCTCTCATGTTAAATTTTTTTCCTCTGTCACTCTTCCAAGTCTCAAGTCAAGGTCTCCAACTCAAGTTTCTGTTTTGTTTTATTTTCCAGATTGAACGGTGGCAATGGAACAAGACAGCGAAGAAGAGGTAAAGACGTTTAAGAGTTTGGGGATATGTGAGCAATTGGTGGAGGCATGCGAGACTTTAGGCTGGAAAAATCCATCAAAGATTCAGGCTGAGGCCATTCCTCATGCCCTGGAAGGTTCTTTCTTTAGCTTATGCATTTTTTACTTAATTCATTTCCTCTATTCAAATATTTCTTTGATTCAGCCAATGCCAGAGTTAAATTTTCTTGTAACTGCTGTTAATTTTGGCGTTGCATGAAAGTTACACATCTTTTTATATAAATATTATGCCGGTAATATTGGATAGCTCTGGTTCTGTATGTGCGGGATAATATATTTTGACAAGCTGCTGCCCATTCTCTTTGCATTTTATAGTTTCTAAATCCGGAGGCAGCACAATCACCTAACTGCTGGATCTTGCTTTTTTAACAATCCATAAGGATCTAAGTATCTTTTTGTTGTAGTAGGTGTCTTTGAGAAATATGTTTGTATGTTAAATTTCTTAGTTCTCTCCATTAGAGCTATGCTTTCTTGCTTTTTACTTGCAAAACTATGTAAATTGATCAAATCAATGGTGCCATCTCAAGTGTTTGTGTCATATTTTTCTCCTATGTTCTTGAAGGGACAAATGATGGTGTTTTTATCGGGTGTTCCTAAAGGAACAAATGCTGGTGTCACATTAGTAGAACAGTTCTTCAGGCCGCTTGTAGACTCAGTTTGTAATAGTCATAAGTTCCTTTCTCGAGGCTAGTCTCTGCAGTGGGTTCTGTTGTTACTTGTGATGCATGACAATCTCTTCAAGGATGATAAGATTTCTATGACAAGCTTTCTTCAAAGGAAATGTGAGAAGTGGTTGAGAAATTTAGTATCACGATAAGCTACGATGTAAGTAGAATGATTACCTCATTGGTCCACGGACCTCTTGGTCATTAGTACAAGCTTTATGTCAGTTGAGCTCAATGTTTTAAAAGGCTATTGAGGCTTACGCCTTGAGGCTTGCCTCAAGGCAAAGCTCTAACTTTTAGCCTCGAGACTTACGCCTTCTTTGGACCATAAGAGGCTTACGCCTTTATAAAAACGCACCGAGGCTTACAGTCTCTACGCCTCATATAATGGTTAAAAGAGTAGTATTAATTTTCCCATTCCTTAAAAATATAAAGTTTTGAGTTTTAACAATTTGAAATATTACTACTTTTACCACTTAGGCTTTAAAAACATTGAAAATAAAAATTTATAGAAGAAGTCAATCCTATAAGTGATAATAGTAGTGAAGTTAAAGATATACCTGTAGAATTTTTGTTCAAGTAGCAATTCAAGGGGTGAATTTTATACTTTTACATAAGTATTATGTTTAGCATTACTTGTTCACACAAATTTAGGATTTATGTGATGTTTTTAATTAAAATTGAGGCTTATGCCTCAAGGCTTGTGCCTTGCCTCTTCAAGAGGAAAAGCCTCGAGGCCGCCTTTGGTCTTTTAAAACATTGGTTGAGCTATGGTTATGTTGGCACGATTACCTCATTGATCCTCGGTAGGCCAAACATGAAATTCCTCTAGAGATCTTCAATGGTGGGAAGACTAGCAATGGTGAATGTAATTTATTATTATGAACTTGCCCTTTGAAGCTTCGCATATAGGACACCTTCTGATAAATTTCTCCTACGCTAAGAAGCATAGATGCAATAAAGGCTAACATGAGCCTCATTCACTGGGTAGAGATCTCCACTCTCTCTAAGAAGTTGTAGGTTCAAATCCTCATCTTAGATGTGATGAAATATTTTTAAAAAATTGCAAGCACACGTGTAGACATGTGACTAGCACGTGACATGAAATTGACACACTATGGATATGGTGACATGTCGATTCAAAGGACACTATGCGTTAACCTATTACCTATACAAGTCCATTACCTAGATGGTACAAAATACAAGAATTTTCCAGTTGGGAGCTAGCTCCAACTCTTAAGATCTTTTTGTGAAAGTTATTCCTCTTCATTGTTATTGTTCTCCATTGTAGAGGCTTTTGTCCATAACCACTTTGGGTTTTGGGGCCTGCACTTCTTTATTCATTCATTCAATTATTGTATGGTTATAGTAGTAGAGCACAGGCTAGACTAGTATGCAAATTTTACAATGCAGGTCTAATGTTGATTTGCGGTGCCCCATCTTCCAGTTTTGTTTTTGCTTTGTTTTCACTATTCTTTCCTAACAACTTATGTTTATGGTATGATAATGTTTAACCTTATGACTCTTGTAATGCAGGAAAGGATTTAATTGGACTTGCACAAACTGGTTCTGGGAAAACTGGAGCTTTTGCTCTTCCCATTTTGCAAGCCCTTTTGGAAGCTCCTCAAGCCTTTTTTGCCTGTGTGCTCTCTCCCACAAGGTTTGCTTTTGACACCCAATTGTAGTAGAGTAGATGGATGACATGTACATAGACACGTCTTATCCTCAAAACAGAGAAGATTGATGTTTTTAGAAAGATTTTAGCCTGTCTATAACCTTCAATTATTTGTTGCTATTGTTATTCTTCAGGGAGCTTGCAATTCAGATTGCTGAGCAGTTTGAAGCTTTAGGGTCTGGCATTGGTATTAAGTGTGCAGTGGTAAGATTTTAGCTAATATAGTATACTGACTTGTAAGTTGCAATGCTGATTACAAATCACGAGGATATTATACTATACGTGAATAAAAAAATGCTTATATATGTATTAAATTACTATGTTTTAAACATTAAATAATGAAAAATCTAAGTAATTTATGCTCAAAATCATCCATTTCATGAGCAATATTTATATATTATAAATGAAATGGCTATTAAATATTATCCAAACCCTACATTAAATATATTGGAGGATATAGGGAAACATAATGCAATATATCCTTTATGCCTTTGTAATGAGGAAGAAGACTCGCATAGTGCTACTTATCAAGGCTAGTTAGCCATACCTTACAGCCTCAGGCCCTCAGCCCTTGGAGATATTTGTTATGCTATCTAAGGGGAGGTAAGTTAGTCGAGAGGATTATAGATGGGAGTTTGTTTATAGGAAGCTAGTTGCTTAATCTAGTTAGCATTGGTATATTCCAGTTGTGGAAAAAAGGCAGAGAGGGAGATGAGAGGTTATAGGGATATGAACTGATTGAGCTTTACAGATGGAGTGCGGCTCATGTAGGGGATTGCTGATTTGTATTTTGTCCAGGCACTTTATTCTGAATACAAAATCTAGTTGAACTCTTTACTTCAATATCTAAAAGCCATGACATAAGATACCTACCAAAATTGAGAAAGAGAGTCTAAGGTGAAAAAAAAGGCTTAACAAAAAAACTTTTTGAGGTTGTGAGGTCTCCTATTTTGCTTTTCTCATTAGTATTTTCCTCTTGAAGCCTTTTGTGCTTTTATATTTAGTAGAATTTGCTGATAATTATTTTATTTTTATCTATTGTAGGTTGTTGGAGGGGTAGACATGGTGCAACAAGCCATTAATTTGGCAAAACGGCCACATATTGTTGTAAGTCTCTGCGATATTTCTGCTTATCTTGAGCTTCATTCTATAGTGTGAATGTGACGTTCCATTTGAAAAATTGTCCTCTTCTAGACATTATCTTTTTGTTCTTGTGGAATATATAATAAAGTGATTTAGCCTCAAAGAAAGAATATTATCAAGTCATAAGCCTCTCCAGGTAAAATTATATGAATATTATACGAAAAATCTACTGGAAAATAGGTGATCCCATTAGTTAAAACAGATGTCCAAGTTAAATAAAGTTACTGCTGCTACTACTGGTAACTTCTGCAGTGAGTAGTTTTTTTTTTTTTGAATAAGAAACAAGGGAATGACTGTTTTCAAAAAATGATAACAATCTTATGATATTCAAAAAATGCGCGAGTAGTTAAACGTACAACTAGCACACATCAAAAAGCATCAACAATCTTATGATATTCACTGAAGTACTTTTGTCTACATAATCGTTCTATACACTATTTCCTTAACTTGTTTGTAACTAGTTCGATGATATGGAATGTTTTCTCATGACTTCTGCTGCTGCTTGTTTATCTAGCTATTTGTTTAAGATTTCAATTTCATTTATTTTGTTGTAGGTTGGCACACCTGGACGCCTTGTGGACCATCTATCAAATACAAAAGGCTTTTCCCTCCGCACATTGAAATATTTGGTGAGTTTTGTAAACAGTTGCCTTTGTAAACAATAAGCTTTCATGTAAAGTGGATATGTTTACTTGGTTGAAGTAATAATCTTGTACTTACTAGCCTATTTTGCCTGTTGAGCAGGTCCTTGATGAGGCAGACAGATTATTGAATGAAGACTTTGAAAAATCCATAGATGAAATTTTGAATGAAATTCCCCGTGAGAGGAGAACATATCTATTTTCTGCTACTATGACAAAAAAGGTGTATGTGAACATTTGTTTTGATTTTCCTTCTTTTTTGTCCATGGAGAACAAAATTTTTGTCGAGAATTAAGAATTAATTAAAAAAATTTCAAAAAGACAAGATTATCATGCTGTCATTCTTGTATCTTATGCAATGTTATAAGTGGGCATGGGAGATGCTAAGCATCATCATAAATGCGTGTGTGGTGGTGTGCATTAGGTTTTTTATTTTTATTTTAATTTTTTAAATAAAAATAAATAAGATTATAAAGAAATAAGAAAAAAGTAGCATAAAAGTCTATATATTTACAATCTCATGAGCTTTTCTCAGTTTTTTTTTTTTTCAATATCTCATTATCATAGTGCTATGTAAATCTTTTTGTATGTATTTATTTTTATTTTTCTTTTGTGCTCTTAAAAAAAAAGGCCATTAAGTGCTTCTGCTTCAGTTCCTTTACAAAGATCAATTGTCAATATTTATTTGTTTTCTTGGGTACATAGACATGAGACATCGTATCTGAATGAGTGTTTTCTGAACACTGGTAGTCTTATTTTTGGGTTTTGTAATGCTTAAAATTACTGACCAAGTTGAGATAATACTACAGGTTCGGAAACTTCAAAGGGCCTGCTTAAGGAATCCTGTTAAGGTATGATTGTGATTATCAAAGATCTAGTTTTCTTTTCTTGAGTTTGCTTAAATCTTAATTTTTCTTGGTCTTGAATTCTTTCAGATTGAAGCGGCAACCAAATATTCCACTGTAGACACACTGAAGCAGCAATATTGTTTTATCCCTGCGAAGTATAAGGTTTTCCTACTTCATGGTTTTTTATATTTGTTTGCGAGTCTAATCATATCGATTTTGCATATTTAAAGGATGCCATTTTTTTGTTCTTTTTCCCCTCGTGTGGAAGAAATCAAACTTAATCTTTTTTGTTAGGGGAAAAAGTATTTTGTTCTTGATACTTATCCTTTCTTTTCTTGTATTTTCCCCCAGTTGCCTTTTCCTTCTCTTCTTCCTCTACAGTTGAAAAACTATACATCCTTATCTCGTAACTAATAGTCACACAAAACTGTATTTTTTGAATAACTACTTTTGGCCTTTCTTCAAACAGCTGAAGACTGAGAGAGGGGGGCTAATTAGTTAATTTTATTGCATTTTAAGAGTTCTCTTGCCTGAGTAATTTACTTCGTGAGAAAGGCACATTGATTCCTAGCTTGCTATTTTTAACTTGTTACTTTGTTAGTTATCACTTTCATCATTGCTATATATTGGGGGAGGCTTCATACTATATTTGGGATATTCAAATGATTATCTTTTGTTTGGTATAATCTGGATGATTAGAAAGGAAAATGTCTGGATTTGTTTGGGGCATGGTAGATAATTGGGTGAGAATGAGGCTTCATGGATTCCCCTGAGTGTGATTGTTTGTTTTTCTTTTTTCTATGCTTTTTATTTTTTAAAATTTTTTAAAAAGATAAAGAACCAAGCTTTCATTGGTACGGTTGAAAAATGAAAGAATAGAAAAAGAAATGCGCACTGCAAATTAAGTTACTATTGGAAACTGATGGCAGTCCTCTACAACCAAAAAAAGAAAGAGTAGGAAAATAGAAAGGAGGAGGCTCTGTGTTTCAGTTTTTGAAAGGAAATACACTTGGTTATCGGGGAGGAGAGAGATTGGTGATTCAACTTTTGAAGGGAAACATTTTTTTACTGTCGGGTTTACTTTATTACATGTCATTTTGTACAGGAGTGTTATCTTGTCTATATCTTAACGGAAATGTCTGGTTCCACATCAATGGTCTTCACTCGCACTTGTGATGCTACTCGTCTTCTATCACTGGTTCTTCGAAATCTTGGATTAAGAGCCATTCCCATAAGTGGTCAGATGACACAGGTACTGTTGCGATATAACTCAGTGGTTTACAACTCTTTTCTCTAGGTATAAAATATTTGAAAGTTGAAAAAATAGTTGGAAGCCTATTTGTATATTTCATTTATCCACTAAGTTTTGTCTTATTAAAAAAATTTGGAAGTTGGGAAGAAAAGTTCTTTAACTTAGGGTCCGTCTGGAATACATTTTAATTTAAATGATTTTCAAGGATGCATTTTTTAAAAAACATTTTGTATAAAAATTGTTTAAAATTTAAACACTCATATGTTTGGTTGCATTTCTTCAGAAATGTTTTTATACACAAGTTATTGTTTACTTAAAAAGTCTTTTTTAAAAAGTTGGTTTCAAGTGTTTCTCTCAAAATTGTTTATTTATCAATCTCATTTTCTAATAAGTCATTTTTAGTGGTTGCCAAACACTAGAAATTTTTTCAAAATGATTTATTTTCAAAATTAAACACTTGAAAAGTTAAACCAAACACACCCTTAATCATTTTGTGGAATTATTCAATTTAGCTCTTTGTGTGGACCATGTCTTTGACAGGCAAAGAGATTAGGAGCCTTAAATAAGTTCAAGGCTGGAGAGTGCAACGTTCTCATCTGCACCGATGTGGCTAGCAGAGGACTTGATATTCCTTCTGTGGATATGGTCATAAATTATGATATTCCTTCAAATTCCAAGGTTCTCCTTTTGCAATTCTATGTATTTAGGTTTACTGTGCATCATTGTGGATTCTATGCCTTCTGCTGTTTGCATTAATTTCTGTATGTGATGTATCTTTCTTTTCCTTATATTCCAATTCAATATCTACATGCTTGGTAGTTTTTTTATTTAGAAGTTGTTTTCGGGCTCTTCTTTTCCCTTTCTTTCCGTGGCCTCAGAAGTCCTAGGTCTGTATAGCTTTCTTTCTAGTGTTTAGAAATTAAAAACTGCTTCCTTGTTTTCTGTGTTAAAGTTTAAAATGAAGAACTACTACTACCGTTTCAAGGTACAATATCCTCACTACTTTTGTTAATGATGATTGATGACATTGCGTGCCCGTTTAGGAACATTATTTCTGGAAGCAAATACTGGGATTCCTTTGGTCTGTTGATGAGGTCTTATGGAAGAAACTTCAACTCTTTTTTCCCCGTTATTTGCTTTTTGTTTTGGTGGTGGATGTTCAGAGTAGATTGATTGGTAATGGGGTTGAGAATGGAGTAGGTTATGTGGGTATTTTTTCCCCGTTATTTGCTTTTTGTTTTGGTGTGGATGTTCAGAGTAGATTGATTGGTAATGGGGTTGAGAATGGAGTAGCATAAGGGTTTAGACTTAGAGTGGGTATCAAATCAGTTTAGCCTTTCTATTCTGCAATTAGGTGCTGTTAAGGATTGGATGTGTCATCCTTTGTGTTCATTTATTTTTATTACTAATATCATATCTTTACTTTTAATTAAAATTACCCACATAATTTTACGAGGACCCAATTTCTAATATTTTATCTTATGTTGAAATACTCTTCTACTATTTGCGTTATCTCGGATGTATCTTGCGTACTCTGAAACTTTTGACGAATCCATTGAATACCTAAACGAAAAACCCACATGTTTGAGACTTGATGGAAATTGGCTTAGATGATAAAAAGATTAGGTCTCAACCTCTTACAATGTTCATCTAAGATGACTTTTATCTGCAGGATTACATCCATAGAGTGGGAAGAACAGCTCGTGCAGGTCGGTCTGGGGTTGCCATTTCGTTAGTTAATCAGTATGAGTTAGAGTGGTATATCCAGATAGAGAAGCTCATAGGTAACAAACGGATGACCATTTCTTTTTGCAGCAAAACACGACAGATCTATTTTTACTTATATATGACTGACTCTTTTAATATGTGGCAGGCAAAAAGCTTCCACAGTTTTCAGCTCAGGAAGAGGAAGTTTTGATGTTGTTAGAGCGTGTGACAGAGGCAAAAAGAATATCTCTTATGGTATTTGATTACTTAACTATGGTTATGACTTGATTACAATTTCTTTTAGGGTAGTTGAACTTTAAAATGTGTCTTAACACATAATTAATTGGGCTTTCAATTTTGATATCAAGAACTTAAAGAGAATGTAATGGATCCAGAAGACTTATTAGACATGAAAGGGAAAGTTTTGGGACCAAACTTATGATATTACTAGTCTTATTCTCAGATTATTCTGTATGTTTTGATGGGTTACAATTTACATAGCTTCTTTCTAACTGGCTCATTCATTTTTCTTTTCCTACATAGTTAATATGGTTATTGAACATGTGCAGAAAATTAAAGAAACTGGTGGCAAAAAGAGGAGGAGAGGTGGAGGGGATGACGACGACGACAACAATGACGTTGAAAAGTATCTGCGTCTCAAGACTGGAAAGAATGGGAAAATGTCCAAGAAGTTGAAAAGAAAATGA

mRNA sequence

ATGGTGCAACAAGCCATTAATTTGGCAAAACGGCCACATATTGTTGTTGGCACACCTGGACGCCTTGTGGACCATCTATCAAATACAAAAGGCTTTTCCCTCCGCACATTGAAATATTTGGTCCTTGATGAGGCAGACAGATTATTGAATGAAGACTTTGAAAAATCCATAGATGAAATTTTGAATGAAATTCCCCGTGAGAGGAGAACATATCTATTTTCTGCTACTATGACAAAAAAGGTTCGGAAACTTCAAAGGGCCTGCTTAAGGAATCCTGTTAAGATTGAAGCGGCAACCAAATATTCCACTGTAGACACACTGAAGCAGCAATATTGTTTTATCCCTGCGAAGTATAAGGAGTGTTATCTTGTCTATATCTTAACGGAAATGTCTGGTTCCACATCAATGGTCTTCACTCGCACTTGTGATGCTACTCGTCTTCTATCACTGGTTCTTCGAAATCTTGGATTAAGAGCCATTCCCATAAGTGGTCAGATGACACAGGCAAAGAGATTAGGAGCCTTAAATAAGTTCAAGGCTGGAGAGTGCAACGTTCTCATCTGCACCGATGTGGCTAGCAGAGGACTTGATATTCCTTCTGTGGATATGGTCATAAATTATGATATTCCTTCAAATTCCAAGGAACATTATTTCTGGAAGCAAATACTGGGATTCCTTTGGTCTGTTGATGAGGTCTTATGGAAGAAACTTCAACTCTTTTTTCCCCGTTATTTGCTTTTTGTTTTGGTGGTGGATGTTCAGAGTAGATTGATTGGTAATGGGGTTGAGAATGGAGATTACATCCATAGAGTGGGAAGAACAGCTCGTGCAGGTCGGTCTGGGGTTGCCATTTCGTTAGTTAATCAGTATGAGTTAGAGTGGTATATCCAGATAGAGAAGCTCATAGGCAAAAAGCTTCCACAGTTTTCAGCTCAGGAAGAGGAAGTTTTGATGTTGTTAGAGCGTGTGACAGAGGCAAAAAGAATATCTCTTATGAAAATTAAAGAAACTGGTGGCAAAAAGAGGAGGAGAGGTGGAGGGGATGACGACGACGACAACAATGACGTTGAAAAGTATCTGCGTCTCAAGACTGGAAAGAATGGGAAAATGTCCAAGAAGTTGAAAAGAAAATGA

Coding sequence (CDS)

ATGGTGCAACAAGCCATTAATTTGGCAAAACGGCCACATATTGTTGTTGGCACACCTGGACGCCTTGTGGACCATCTATCAAATACAAAAGGCTTTTCCCTCCGCACATTGAAATATTTGGTCCTTGATGAGGCAGACAGATTATTGAATGAAGACTTTGAAAAATCCATAGATGAAATTTTGAATGAAATTCCCCGTGAGAGGAGAACATATCTATTTTCTGCTACTATGACAAAAAAGGTTCGGAAACTTCAAAGGGCCTGCTTAAGGAATCCTGTTAAGATTGAAGCGGCAACCAAATATTCCACTGTAGACACACTGAAGCAGCAATATTGTTTTATCCCTGCGAAGTATAAGGAGTGTTATCTTGTCTATATCTTAACGGAAATGTCTGGTTCCACATCAATGGTCTTCACTCGCACTTGTGATGCTACTCGTCTTCTATCACTGGTTCTTCGAAATCTTGGATTAAGAGCCATTCCCATAAGTGGTCAGATGACACAGGCAAAGAGATTAGGAGCCTTAAATAAGTTCAAGGCTGGAGAGTGCAACGTTCTCATCTGCACCGATGTGGCTAGCAGAGGACTTGATATTCCTTCTGTGGATATGGTCATAAATTATGATATTCCTTCAAATTCCAAGGAACATTATTTCTGGAAGCAAATACTGGGATTCCTTTGGTCTGTTGATGAGGTCTTATGGAAGAAACTTCAACTCTTTTTTCCCCGTTATTTGCTTTTTGTTTTGGTGGTGGATGTTCAGAGTAGATTGATTGGTAATGGGGTTGAGAATGGAGATTACATCCATAGAGTGGGAAGAACAGCTCGTGCAGGTCGGTCTGGGGTTGCCATTTCGTTAGTTAATCAGTATGAGTTAGAGTGGTATATCCAGATAGAGAAGCTCATAGGCAAAAAGCTTCCACAGTTTTCAGCTCAGGAAGAGGAAGTTTTGATGTTGTTAGAGCGTGTGACAGAGGCAAAAAGAATATCTCTTATGAAAATTAAAGAAACTGGTGGCAAAAAGAGGAGGAGAGGTGGAGGGGATGACGACGACGACAACAATGACGTTGAAAAGTATCTGCGTCTCAAGACTGGAAAGAATGGGAAAATGTCCAAGAAGTTGAAAAGAAAATGA

Protein sequence

MVQQAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYLVYILTEMSGSTSMVFTRTCDATRLLSLVLRNLGLRAIPISGQMTQAKRLGALNKFKAGECNVLICTDVASRGLDIPSVDMVINYDIPSNSKEHYFWKQILGFLWSVDEVLWKKLQLFFPRYLLFVLVVDVQSRLIGNGVENGDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLLERVTEAKRISLMKIKETGGKKRRRGGGDDDDDNNDVEKYLRLKTGKNGKMSKKLKRK

Homology

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BLAST of Spg038063 vs. NCBI nr
Match: XP_038876108.1 (DEAD-box ATP-dependent RNA helicase 10 [Benincasa hispida])

HSP 1 Score: 581.6 bits (1498), Expect = 4.8e-162
Identity = 317/383 (82.77%), Postives = 321/383 (83.81%), Query Frame = 0


Query: 1   MVQQAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEI 60
           MVQQAINLAKRPHIVVGTPGRLVDHL+NTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEI
Sbjct: 118 MVQQAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEI 177

Query: 61  LNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKE 120
           LNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKE
Sbjct: 178 LNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKE 237

Query: 121 CYLVYILTEMSGSTSMVFTRTCDATRLLSLVLRNLGLRAIPISGQMTQAKRLGALNKFKA 180
           CYLVYILTEMSGSTSMVFTRTCDATRLLSL+LRNLGLRAIPISGQMTQAKRLGALNKFKA
Sbjct: 238 CYLVYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKA 297

Query: 181 GECNVLICTDVASRGLDIPSVDMVINYDIPSNSKEHYFWKQILGFLWSVDEVLWKKLQLF 240
           GECNVLICTDVASRGLDIPSVDMVINYDIPSNSK                          
Sbjct: 298 GECNVLICTDVASRGLDIPSVDMVINYDIPSNSK-------------------------- 357

Query: 241 FPRYLLFVLVVDVQSRLIGNGVENGDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK 300
                                    DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK
Sbjct: 358 -------------------------DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK 417

Query: 301 LIGKKLPQFSAQEEEVLMLLERVTEAKRISLMKIKETGGKKRRRGGGDDDDDNNDVEKYL 360
           LIGKKLPQFSAQEEEVLMLLERVTEAKRISLMKIKETGG+KRRRG  DDD+DNNDVEKYL
Sbjct: 418 LIGKKLPQFSAQEEEVLMLLERVTEAKRISLMKIKETGGRKRRRGEDDDDNDNNDVEKYL 449

Query: 361 RLKTGKN------GKMSKKLKRK 378
            LKTGK       GK SKKLKRK
Sbjct: 478 GLKTGKRAKMSNIGKTSKKLKRK 449

[Close]

BLAST of Spg038063 vs. NCBI nr
Match: XP_011654632.1 (DEAD-box ATP-dependent RNA helicase 10 [Cucumis sativus] >KGN49894.1 hypothetical protein Csa_000132 [Cucumis sativus])

HSP 1 Score: 580.9 bits (1496), Expect = 8.1e-162
Identity = 315/384 (82.03%), Postives = 323/384 (84.11%), Query Frame = 0


Query: 1   MVQQAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEI 60
           MVQQAINLAKRPH+VVGTPGRLVDHL+NTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEI
Sbjct: 117 MVQQAINLAKRPHVVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEI 176

Query: 61  LNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKE 120
           LNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKE
Sbjct: 177 LNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKE 236

Query: 121 CYLVYILTEMSGSTSMVFTRTCDATRLLSLVLRNLGLRAIPISGQMTQAKRLGALNKFKA 180
           CYLVYILTEMSGSTSMVFTRTCDATRLLSL+LRNLGLRAIPISGQMTQAKRLGALNKFKA
Sbjct: 237 CYLVYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKA 296

Query: 181 GECNVLICTDVASRGLDIPSVDMVINYDIPSNSKEHYFWKQILGFLWSVDEVLWKKLQLF 240
           GECN+LICTDVASRGLDIPSVDMVINYDIPSNSK                          
Sbjct: 297 GECNILICTDVASRGLDIPSVDMVINYDIPSNSK-------------------------- 356

Query: 241 FPRYLLFVLVVDVQSRLIGNGVENGDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK 300
                                    DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK
Sbjct: 357 -------------------------DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK 416

Query: 301 LIGKKLPQFSAQEEEVLMLLERVTEAKRISLMKIKETGGKKRRRGGGDDDD-DNNDVEKY 360
           LIGKKLPQFSAQEEEVLMLLERV EAKRISLMKIKETGG+KRRRGG DDDD +NNDVEKY
Sbjct: 417 LIGKKLPQFSAQEEEVLMLLERVAEAKRISLMKIKETGGRKRRRGGDDDDDNENNDVEKY 449

Query: 361 LRLKTG------KNGKMSKKLKRK 378
           LRLKTG      KNGK SKK+KR+
Sbjct: 477 LRLKTGKGGKMSKNGKTSKKMKRR 449

[Close]

BLAST of Spg038063 vs. NCBI nr
Match: XP_022957788.1 (DEAD-box ATP-dependent RNA helicase 10-like [Cucurbita moschata] >XP_022957789.1 DEAD-box ATP-dependent RNA helicase 10-like [Cucurbita moschata] >XP_022995218.1 DEAD-box ATP-dependent RNA helicase 10-like [Cucurbita maxima] >XP_022995219.1 DEAD-box ATP-dependent RNA helicase 10-like [Cucurbita maxima] >KAG7035728.1 DEAD-box ATP-dependent RNA helicase 10 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 580.1 bits (1494), Expect = 1.4e-161
Identity = 311/378 (82.28%), Postives = 322/378 (85.19%), Query Frame = 0


Query: 1   MVQQAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEI 60
           MVQQAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDF+KSIDEI
Sbjct: 118 MVQQAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFQKSIDEI 177

Query: 61  LNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKE 120
           L+EIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAA+KYSTVDTLKQ+YCFIPAKYKE
Sbjct: 178 LDEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQEYCFIPAKYKE 237

Query: 121 CYLVYILTEMSGSTSMVFTRTCDATRLLSLVLRNLGLRAIPISGQMTQAKRLGALNKFKA 180
           CYLVYILTEMSGSTSMVFTRTCDATRLLSL+LRNLGLRAIPISGQMTQAKRLGALNKFKA
Sbjct: 238 CYLVYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKA 297

Query: 181 GECNVLICTDVASRGLDIPSVDMVINYDIPSNSKEHYFWKQILGFLWSVDEVLWKKLQLF 240
           GECNVLICTDVASRGLDIPSVDMVINYDIPSNSK                          
Sbjct: 298 GECNVLICTDVASRGLDIPSVDMVINYDIPSNSK-------------------------- 357

Query: 241 FPRYLLFVLVVDVQSRLIGNGVENGDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK 300
                                    DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK
Sbjct: 358 -------------------------DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK 417

Query: 301 LIGKKLPQFSAQEEEVLMLLERVTEAKRISLMKIKETGGKKRRRGGGDDDD-DNNDVEKY 360
           LIGKKLPQFSAQEEEVLML +RV EAKRIS+MKIKE+GGKKRRRGGGDDDD D+NDVEKY
Sbjct: 418 LIGKKLPQFSAQEEEVLMLFDRVAEAKRISIMKIKESGGKKRRRGGGDDDDNDDNDVEKY 444

Query: 361 LRLKTGKNGKMSKKLKRK 378
           LRLK+GKNGKMSKK  +K
Sbjct: 478 LRLKSGKNGKMSKKFNKK 444

[Close]

BLAST of Spg038063 vs. NCBI nr
Match: XP_008437560.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 10 [Cucumis melo] >KAA0042572.1 DEAD-box ATP-dependent RNA helicase 10 [Cucumis melo var. makuwa] >TYK05976.1 DEAD-box ATP-dependent RNA helicase 10 [Cucumis melo var. makuwa])

HSP 1 Score: 578.9 bits (1491), Expect = 3.1e-161
Identity = 318/384 (82.81%), Postives = 323/384 (84.11%), Query Frame = 0


Query: 1   MVQQAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEI 60
           MVQQAINLAKRPHIVVGTPGRLVDHL+NTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEI
Sbjct: 118 MVQQAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEI 177

Query: 61  LNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKE 120
           LNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKE
Sbjct: 178 LNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKE 237

Query: 121 CYLVYILTEMSGSTSMVFTRTCDATRLLSLVLRNLGLRAIPISGQMTQAKRLGALNKFKA 180
           CYLVYILTEMSGSTSMVFTRTCDATRLLSL+LRNLGLRAIPISGQMTQAKRLGALNKFKA
Sbjct: 238 CYLVYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKA 297

Query: 181 GECNVLICTDVASRGLDIPSVDMVINYDIPSNSKEHYFWKQILGFLWSVDEVLWKKLQLF 240
           GECN+LICTDVASRGLDIPSVDMVINYDIPSNSK                          
Sbjct: 298 GECNILICTDVASRGLDIPSVDMVINYDIPSNSK-------------------------- 357

Query: 241 FPRYLLFVLVVDVQSRLIGNGVENGDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK 300
                                    DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK
Sbjct: 358 -------------------------DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK 417

Query: 301 LIGKKLPQFSAQEEEVLMLLERVTEAKRISLMKIKETGGKKRRRGGGDDDD-DNNDVEKY 360
           LIGKKLPQFSAQEEEVLMLLERVTEAKRISLMKIKETGGKKRRRGG D+DD DNNDVEKY
Sbjct: 418 LIGKKLPQFSAQEEEVLMLLERVTEAKRISLMKIKETGGKKRRRGGDDEDDNDNNDVEKY 449

Query: 361 LRLKTG------KNGKMSKKLKRK 378
           LR KTG      KNGK SKK+KRK
Sbjct: 478 LR-KTGKGGKMSKNGKTSKKMKRK 449

[Close]

BLAST of Spg038063 vs. NCBI nr
Match: XP_023534735.1 (DEAD-box ATP-dependent RNA helicase 10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 577.8 bits (1488), Expect = 6.9e-161
Identity = 310/378 (82.01%), Postives = 321/378 (84.92%), Query Frame = 0


Query: 1   MVQQAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEI 60
           MVQQAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDF+KSIDEI
Sbjct: 118 MVQQAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFQKSIDEI 177

Query: 61  LNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKE 120
           L+EIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAA+KYSTVDTLKQ+YCFIPAKYKE
Sbjct: 178 LDEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQEYCFIPAKYKE 237

Query: 121 CYLVYILTEMSGSTSMVFTRTCDATRLLSLVLRNLGLRAIPISGQMTQAKRLGALNKFKA 180
           CYLVYILTEMSGSTSMVFTRTCDATRLLSL+LRNLGLRAIPISGQMTQAKRLGALNKFKA
Sbjct: 238 CYLVYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKA 297

Query: 181 GECNVLICTDVASRGLDIPSVDMVINYDIPSNSKEHYFWKQILGFLWSVDEVLWKKLQLF 240
           GECNVLICTDVASRGLDIPSVDMVINYDIPSNSK                          
Sbjct: 298 GECNVLICTDVASRGLDIPSVDMVINYDIPSNSK-------------------------- 357

Query: 241 FPRYLLFVLVVDVQSRLIGNGVENGDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK 300
                                    DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK
Sbjct: 358 -------------------------DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK 417

Query: 301 LIGKKLPQFSAQEEEVLMLLERVTEAKRISLMKIKETGGKKRRRGGGDDDD-DNNDVEKY 360
           LIGKKLPQFSAQEEEVLML +RV EAKRIS+ KIKE+GGKKRRRGGGDDDD D+NDVEKY
Sbjct: 418 LIGKKLPQFSAQEEEVLMLFDRVAEAKRISITKIKESGGKKRRRGGGDDDDNDDNDVEKY 444

Query: 361 LRLKTGKNGKMSKKLKRK 378
           LRLK+GKNGKMSKK  +K
Sbjct: 478 LRLKSGKNGKMSKKFNKK 444

[Close]

BLAST of Spg038063 vs. ExPASy Swiss-Prot
Match: Q8GY84 (DEAD-box ATP-dependent RNA helicase 10 OS=Arabidopsis thaliana OX=3702 GN=RH10 PE=1 SV=2)

HSP 1 Score: 460.7 bits (1184), Expect = 1.6e-128
Identity = 250/384 (65.10%), Postives = 290/384 (75.52%), Query Frame = 0


Query: 2   VQQAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEIL 61
           +QQ I L KRPH++V TPGRL DH+S+TKGFSL++LKYLVLDEADRLLNEDFEKS+++IL
Sbjct: 130 MQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQIL 189

Query: 62  NEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKEC 121
            EIP ER+T+LFSATMTKKVRKLQRACLRNPVKIEAA+KYSTVDTLKQQY F+ AKYK+C
Sbjct: 190 EEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVAAKYKDC 249

Query: 122 YLVYILTEMSGSTSMVFTRTCDATRLLSLVLRNLGLRAIPISGQMTQAKRLGALNKFKAG 181
           YLVYIL+EM  STSM+FTRTCD TR L+LVLR+LG RAIPISGQMTQ+KRLGALNKFKAG
Sbjct: 250 YLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKFKAG 309

Query: 182 ECNVLICTDVASRGLDIPSVDMVINYDIPSNSKEHYFWKQILGFLWSVDEVLWKKLQLFF 241
           ECN+L+CTDVASRGLDIPSVD+VINYDIP+NSK                           
Sbjct: 310 ECNILVCTDVASRGLDIPSVDVVINYDIPTNSK--------------------------- 369

Query: 242 PRYLLFVLVVDVQSRLIGNGVENGDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKL 301
                                   DYIHRVGRTARAGRSGV ISLVNQYELEWYIQIEKL
Sbjct: 370 ------------------------DYIHRVGRTARAGRSGVGISLVNQYELEWYIQIEKL 429

Query: 302 IGKKLPQFSAQEEEVLMLLERVTEAKRISLMKIKETGGKKRRRGGGDDDDDNNDVEKYL- 361
           IGKKLP++ A+E+EVL LLERV EAK++S M +KE+GG+KRR   G+DD+++   E++L 
Sbjct: 430 IGKKLPEYPAEEDEVLSLLERVAEAKKLSAMNMKESGGRKRR---GEDDEES---ERFLG 456

Query: 362 --------RLKTGKNGKMSKKLKR 377
                        K+ K SKK KR
Sbjct: 490 GNKDRGNKERGGNKDKKSSKKFKR 456

[Close]

BLAST of Spg038063 vs. ExPASy Swiss-Prot
Match: A2XKG2 (DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sativa subsp. indica OX=39946 GN=RH10 PE=1 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 7.8e-107
Identity = 203/374 (54.28%), Postives = 262/374 (70.05%), Query Frame = 0


Query: 2   VQQAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEIL 61
           VQQA++LAKRPHIVVGTPGRL+DHL++TKGFSL  LKYLVLDEAD+LLN +F+K++D+IL
Sbjct: 152 VQQAVSLAKRPHIVVGTPGRLLDHLTDTKGFSLNKLKYLVLDEADKLLNVEFQKALDDIL 211

Query: 62  NEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKEC 121
           N IP+ERRT+LFSATMT KV KLQRACLRNPVK+E A+KYSTVDTL+Q++ F+PA YK+C
Sbjct: 212 NVIPKERRTFLFSATMTNKVSKLQRACLRNPVKVEVASKYSTVDTLRQEFYFVPADYKDC 271

Query: 122 YLVYILTEMSGSTSMVFTRTCDATRLLSLVLRNLGLRAIPISGQMTQAKRLGALNKFKAG 181
           +LV++L E+ GS  M+F RTC++TRLL+L LRNL  +AI ISGQM+Q KRLGALN+FK  
Sbjct: 272 FLVHVLNELPGSMIMIFVRTCESTRLLALTLRNLRFKAISISGQMSQDKRLGALNRFKTK 331

Query: 182 ECNVLICTDVASRGLDIPSVDMVINYDIPSNSKEHYFWKQILGFLWSVDEVLWKKLQLFF 241
           +CN+LICTDVASRGLDI  VD+VINYDIP NSK                           
Sbjct: 332 DCNILICTDVASRGLDIQGVDVVINYDIPMNSK--------------------------- 391

Query: 242 PRYLLFVLVVDVQSRLIGNGVENGDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKL 301
                                   DY+HRVGRTARAG +G A+SLVNQYE  W+  IEKL
Sbjct: 392 ------------------------DYVHRVGRTARAGNTGYAVSLVNQYEAMWFKMIEKL 451

Query: 302 IGKKLPQFSAQEEEVLMLLERVTEAKRISLMKIKETGGKKRRRGGGDDDDDNNDVEKYLR 361
           +G ++P       E+++L ER++++KRI+L  +KE GG K++R   +DD++  +      
Sbjct: 452 LGYEIPDRKVDNAEIMILRERISDSKRIALTTMKEGGGHKKKRRKNEDDEEEEE------ 464

Query: 362 LKTGKNGKMSKKLK 376
               +N  +S+K K
Sbjct: 512 ----RNAPVSRKSK 464

[Close]

BLAST of Spg038063 vs. ExPASy Swiss-Prot
Match: Q7Y183 (DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sativa subsp. japonica OX=39947 GN=RH10 PE=2 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 7.8e-107
Identity = 203/374 (54.28%), Postives = 262/374 (70.05%), Query Frame = 0


Query: 2   VQQAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEIL 61
           VQQA++LAKRPHIVVGTPGRL+DHL++TKGFSL  LKYLVLDEAD+LLN +F+K++D+IL
Sbjct: 152 VQQAVSLAKRPHIVVGTPGRLLDHLTDTKGFSLNKLKYLVLDEADKLLNVEFQKALDDIL 211

Query: 62  NEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKEC 121
           N IP+ERRT+LFSATMT KV KLQRACLRNPVK+E A+KYSTVDTL+Q++ F+PA YK+C
Sbjct: 212 NVIPKERRTFLFSATMTNKVSKLQRACLRNPVKVEVASKYSTVDTLRQEFYFVPADYKDC 271

Query: 122 YLVYILTEMSGSTSMVFTRTCDATRLLSLVLRNLGLRAIPISGQMTQAKRLGALNKFKAG 181
           +LV++L E+ GS  M+F RTC++TRLL+L LRNL  +AI ISGQM+Q KRLGALN+FK  
Sbjct: 272 FLVHVLNELPGSMIMIFVRTCESTRLLALTLRNLRFKAISISGQMSQDKRLGALNRFKTK 331

Query: 182 ECNVLICTDVASRGLDIPSVDMVINYDIPSNSKEHYFWKQILGFLWSVDEVLWKKLQLFF 241
           +CN+LICTDVASRGLDI  VD+VINYDIP NSK                           
Sbjct: 332 DCNILICTDVASRGLDIQGVDVVINYDIPMNSK--------------------------- 391

Query: 242 PRYLLFVLVVDVQSRLIGNGVENGDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKL 301
                                   DY+HRVGRTARAG +G A+SLVNQYE  W+  IEKL
Sbjct: 392 ------------------------DYVHRVGRTARAGNTGYAVSLVNQYEAMWFKMIEKL 451

Query: 302 IGKKLPQFSAQEEEVLMLLERVTEAKRISLMKIKETGGKKRRRGGGDDDDDNNDVEKYLR 361
           +G ++P       E+++L ER++++KRI+L  +KE GG K++R   +DD++  +      
Sbjct: 452 LGYEIPDRKVDNAEIMILRERISDSKRIALTTMKEGGGHKKKRRKNEDDEEEEE------ 464

Query: 362 LKTGKNGKMSKKLK 376
               +N  +S+K K
Sbjct: 512 ----RNAPVSRKSK 464

[Close]

BLAST of Spg038063 vs. ExPASy Swiss-Prot
Match: Q29S22 (Probable ATP-dependent RNA helicase DDX47 OS=Bos taurus OX=9913 GN=DDX47 PE=2 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 3.0e-98
Identity = 194/374 (51.87%), Postives = 257/374 (68.72%), Query Frame = 0


Query: 2   VQQAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEIL 61
           + Q++ LAK+PHIV+ TPGRL+DHL NTKGF+LR LKYLV+DEADR+LN DFE  +D+IL
Sbjct: 135 MSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 194

Query: 62  NEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKEC 121
             IPR+R+T+LFSATMTKKV+KLQRA L+NPVK   ++KY TV+ L+Q Y FIP+K+K+ 
Sbjct: 195 KVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDT 254

Query: 122 YLVYILTEMSGSTSMVFTRTCDATRLLSLVLRNLGLRAIPISGQMTQAKRLGALNKFKAG 181
           YLVYIL E++G++ M+F  TC+ T+  +L+LRNLG  AIP+ GQM+Q+KRLG+LNKFKA 
Sbjct: 255 YLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAK 314

Query: 182 ECNVLICTDVASRGLDIPSVDMVINYDIPSNSKEHYFWKQILGFLWSVDEVLWKKLQLFF 241
             ++L+ TDVASRGLDIP VD+V+N+DIP++SK                           
Sbjct: 315 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSK--------------------------- 374

Query: 242 PRYLLFVLVVDVQSRLIGNGVENGDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKL 301
                                   DYIHRVGRTARAGRSG AI+ V QY++E + +IE L
Sbjct: 375 ------------------------DYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHL 434

Query: 302 IGKKLPQFSAQEEEVLMLLERVTEAKRISLMKIKETGGKKRRRGGGDDDDDNNDVEKYLR 361
           IGKKLP F  Q++EV+ML ERVTEA+R + M+++E G KK+R    +D  DN+D E  + 
Sbjct: 435 IGKKLPVFPTQDDEVMMLTERVTEAQRFARMELREHGEKKKR--SREDVGDNDDTEGAIG 455

Query: 362 LKTGKNGKMSKKLK 376
           ++    G   KK K
Sbjct: 495 VRNKVAGGKMKKRK 455

[Close]

BLAST of Spg038063 vs. ExPASy Swiss-Prot
Match: Q9CWX9 (Probable ATP-dependent RNA helicase DDX47 OS=Mus musculus OX=10090 GN=Ddx47 PE=2 SV=2)

HSP 1 Score: 360.1 bits (923), Expect = 3.0e-98
Identity = 195/375 (52.00%), Postives = 257/375 (68.53%), Query Frame = 0


Query: 2   VQQAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEIL 61
           + Q++ LAK+PHIV+ TPGRL+DHL NTKGF+LR LKYLV+DEADR+LN DFE  +D+IL
Sbjct: 133 MSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 192

Query: 62  NEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKEC 121
             IPR+R+T+LFSATMTKKV+KLQRA L+NPVK   ++KY TV+ L+Q Y FIP+K+K+ 
Sbjct: 193 KVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDT 252

Query: 122 YLVYILTEMSGSTSMVFTRTCDATRLLSLVLRNLGLRAIPISGQMTQAKRLGALNKFKAG 181
           YLVYIL E++G++ M+F  TC+ T+  +L+LRNLG  AIP+ GQM+Q+KRLG+LNKFKA 
Sbjct: 253 YLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAK 312

Query: 182 ECNVLICTDVASRGLDIPSVDMVINYDIPSNSKEHYFWKQILGFLWSVDEVLWKKLQLFF 241
             ++L+ TDVASRGLDIP VD+V+N+DIP++SK                           
Sbjct: 313 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSK--------------------------- 372

Query: 242 PRYLLFVLVVDVQSRLIGNGVENGDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKL 301
                                   DYIHRVGRTARAGRSG AI+ V QY++E + +IE L
Sbjct: 373 ------------------------DYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHL 432

Query: 302 IGKKLPQFSAQEEEVLMLLERVTEAKRISLMKIKETGGKKRRRGGGDDDDDNNDVEKYLR 361
           IGKKLP F  Q+EEV+ML ERV EA+R + M+++E G KK+R+     DDD+ +    +R
Sbjct: 433 IGKKLPVFPTQDEEVMMLTERVNEAQRFARMELREHGEKKKRKREDAGDDDDKEGAIGVR 455

Query: 362 LKTGKNGKMSKKLKR 377
            K    GKM K+  R
Sbjct: 493 NKVA-GGKMKKRKGR 455

[Close]

BLAST of Spg038063 vs. ExPASy TrEMBL
Match: A0A0A0KM04 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139720 PE=3 SV=1)

HSP 1 Score: 580.9 bits (1496), Expect = 3.9e-162
Identity = 315/384 (82.03%), Postives = 323/384 (84.11%), Query Frame = 0


Query: 1   MVQQAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEI 60
           MVQQAINLAKRPH+VVGTPGRLVDHL+NTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEI
Sbjct: 117 MVQQAINLAKRPHVVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEI 176

Query: 61  LNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKE 120
           LNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKE
Sbjct: 177 LNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKE 236

Query: 121 CYLVYILTEMSGSTSMVFTRTCDATRLLSLVLRNLGLRAIPISGQMTQAKRLGALNKFKA 180
           CYLVYILTEMSGSTSMVFTRTCDATRLLSL+LRNLGLRAIPISGQMTQAKRLGALNKFKA
Sbjct: 237 CYLVYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKA 296

Query: 181 GECNVLICTDVASRGLDIPSVDMVINYDIPSNSKEHYFWKQILGFLWSVDEVLWKKLQLF 240
           GECN+LICTDVASRGLDIPSVDMVINYDIPSNSK                          
Sbjct: 297 GECNILICTDVASRGLDIPSVDMVINYDIPSNSK-------------------------- 356

Query: 241 FPRYLLFVLVVDVQSRLIGNGVENGDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK 300
                                    DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK
Sbjct: 357 -------------------------DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK 416

Query: 301 LIGKKLPQFSAQEEEVLMLLERVTEAKRISLMKIKETGGKKRRRGGGDDDD-DNNDVEKY 360
           LIGKKLPQFSAQEEEVLMLLERV EAKRISLMKIKETGG+KRRRGG DDDD +NNDVEKY
Sbjct: 417 LIGKKLPQFSAQEEEVLMLLERVAEAKRISLMKIKETGGRKRRRGGDDDDDNENNDVEKY 449

Query: 361 LRLKTG------KNGKMSKKLKRK 378
           LRLKTG      KNGK SKK+KR+
Sbjct: 477 LRLKTGKGGKMSKNGKTSKKMKRR 449

[Close]

BLAST of Spg038063 vs. ExPASy TrEMBL
Match: A0A6J1K797 (DEAD-box ATP-dependent RNA helicase 10-like OS=Cucurbita maxima OX=3661 GN=LOC111490827 PE=3 SV=1)

HSP 1 Score: 580.1 bits (1494), Expect = 6.7e-162
Identity = 311/378 (82.28%), Postives = 322/378 (85.19%), Query Frame = 0


Query: 1   MVQQAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEI 60
           MVQQAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDF+KSIDEI
Sbjct: 118 MVQQAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFQKSIDEI 177

Query: 61  LNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKE 120
           L+EIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAA+KYSTVDTLKQ+YCFIPAKYKE
Sbjct: 178 LDEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQEYCFIPAKYKE 237

Query: 121 CYLVYILTEMSGSTSMVFTRTCDATRLLSLVLRNLGLRAIPISGQMTQAKRLGALNKFKA 180
           CYLVYILTEMSGSTSMVFTRTCDATRLLSL+LRNLGLRAIPISGQMTQAKRLGALNKFKA
Sbjct: 238 CYLVYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKA 297

Query: 181 GECNVLICTDVASRGLDIPSVDMVINYDIPSNSKEHYFWKQILGFLWSVDEVLWKKLQLF 240
           GECNVLICTDVASRGLDIPSVDMVINYDIPSNSK                          
Sbjct: 298 GECNVLICTDVASRGLDIPSVDMVINYDIPSNSK-------------------------- 357

Query: 241 FPRYLLFVLVVDVQSRLIGNGVENGDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK 300
                                    DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK
Sbjct: 358 -------------------------DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK 417

Query: 301 LIGKKLPQFSAQEEEVLMLLERVTEAKRISLMKIKETGGKKRRRGGGDDDD-DNNDVEKY 360
           LIGKKLPQFSAQEEEVLML +RV EAKRIS+MKIKE+GGKKRRRGGGDDDD D+NDVEKY
Sbjct: 418 LIGKKLPQFSAQEEEVLMLFDRVAEAKRISIMKIKESGGKKRRRGGGDDDDNDDNDVEKY 444

Query: 361 LRLKTGKNGKMSKKLKRK 378
           LRLK+GKNGKMSKK  +K
Sbjct: 478 LRLKSGKNGKMSKKFNKK 444

[Close]

BLAST of Spg038063 vs. ExPASy TrEMBL
Match: A0A6J1H304 (DEAD-box ATP-dependent RNA helicase 10-like OS=Cucurbita moschata OX=3662 GN=LOC111459226 PE=3 SV=1)

HSP 1 Score: 580.1 bits (1494), Expect = 6.7e-162
Identity = 311/378 (82.28%), Postives = 322/378 (85.19%), Query Frame = 0


Query: 1   MVQQAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEI 60
           MVQQAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDF+KSIDEI
Sbjct: 118 MVQQAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFQKSIDEI 177

Query: 61  LNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKE 120
           L+EIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAA+KYSTVDTLKQ+YCFIPAKYKE
Sbjct: 178 LDEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQEYCFIPAKYKE 237

Query: 121 CYLVYILTEMSGSTSMVFTRTCDATRLLSLVLRNLGLRAIPISGQMTQAKRLGALNKFKA 180
           CYLVYILTEMSGSTSMVFTRTCDATRLLSL+LRNLGLRAIPISGQMTQAKRLGALNKFKA
Sbjct: 238 CYLVYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKA 297

Query: 181 GECNVLICTDVASRGLDIPSVDMVINYDIPSNSKEHYFWKQILGFLWSVDEVLWKKLQLF 240
           GECNVLICTDVASRGLDIPSVDMVINYDIPSNSK                          
Sbjct: 298 GECNVLICTDVASRGLDIPSVDMVINYDIPSNSK-------------------------- 357

Query: 241 FPRYLLFVLVVDVQSRLIGNGVENGDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK 300
                                    DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK
Sbjct: 358 -------------------------DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK 417

Query: 301 LIGKKLPQFSAQEEEVLMLLERVTEAKRISLMKIKETGGKKRRRGGGDDDD-DNNDVEKY 360
           LIGKKLPQFSAQEEEVLML +RV EAKRIS+MKIKE+GGKKRRRGGGDDDD D+NDVEKY
Sbjct: 418 LIGKKLPQFSAQEEEVLMLFDRVAEAKRISIMKIKESGGKKRRRGGGDDDDNDDNDVEKY 444

Query: 361 LRLKTGKNGKMSKKLKRK 378
           LRLK+GKNGKMSKK  +K
Sbjct: 478 LRLKSGKNGKMSKKFNKK 444

[Close]

BLAST of Spg038063 vs. ExPASy TrEMBL
Match: A0A5D3C6L0 (DEAD-box ATP-dependent RNA helicase 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00720 PE=3 SV=1)

HSP 1 Score: 578.9 bits (1491), Expect = 1.5e-161
Identity = 318/384 (82.81%), Postives = 323/384 (84.11%), Query Frame = 0


Query: 1   MVQQAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEI 60
           MVQQAINLAKRPHIVVGTPGRLVDHL+NTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEI
Sbjct: 118 MVQQAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEI 177

Query: 61  LNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKE 120
           LNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKE
Sbjct: 178 LNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKE 237

Query: 121 CYLVYILTEMSGSTSMVFTRTCDATRLLSLVLRNLGLRAIPISGQMTQAKRLGALNKFKA 180
           CYLVYILTEMSGSTSMVFTRTCDATRLLSL+LRNLGLRAIPISGQMTQAKRLGALNKFKA
Sbjct: 238 CYLVYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKA 297

Query: 181 GECNVLICTDVASRGLDIPSVDMVINYDIPSNSKEHYFWKQILGFLWSVDEVLWKKLQLF 240
           GECN+LICTDVASRGLDIPSVDMVINYDIPSNSK                          
Sbjct: 298 GECNILICTDVASRGLDIPSVDMVINYDIPSNSK-------------------------- 357

Query: 241 FPRYLLFVLVVDVQSRLIGNGVENGDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK 300
                                    DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK
Sbjct: 358 -------------------------DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK 417

Query: 301 LIGKKLPQFSAQEEEVLMLLERVTEAKRISLMKIKETGGKKRRRGGGDDDD-DNNDVEKY 360
           LIGKKLPQFSAQEEEVLMLLERVTEAKRISLMKIKETGGKKRRRGG D+DD DNNDVEKY
Sbjct: 418 LIGKKLPQFSAQEEEVLMLLERVTEAKRISLMKIKETGGKKRRRGGDDEDDNDNNDVEKY 449

Query: 361 LRLKTG------KNGKMSKKLKRK 378
           LR KTG      KNGK SKK+KRK
Sbjct: 478 LR-KTGKGGKMSKNGKTSKKMKRK 449

[Close]

BLAST of Spg038063 vs. ExPASy TrEMBL
Match: A0A1S3AUW6 (DEAD-box ATP-dependent RNA helicase 10 OS=Cucumis melo OX=3656 GN=LOC103482938 PE=3 SV=1)

HSP 1 Score: 578.9 bits (1491), Expect = 1.5e-161
Identity = 318/384 (82.81%), Postives = 323/384 (84.11%), Query Frame = 0


Query: 1   MVQQAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEI 60
           MVQQAINLAKRPHIVVGTPGRLVDHL+NTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEI
Sbjct: 118 MVQQAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEI 177

Query: 61  LNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKE 120
           LNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKE
Sbjct: 178 LNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKE 237

Query: 121 CYLVYILTEMSGSTSMVFTRTCDATRLLSLVLRNLGLRAIPISGQMTQAKRLGALNKFKA 180
           CYLVYILTEMSGSTSMVFTRTCDATRLLSL+LRNLGLRAIPISGQMTQAKRLGALNKFKA
Sbjct: 238 CYLVYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKA 297

Query: 181 GECNVLICTDVASRGLDIPSVDMVINYDIPSNSKEHYFWKQILGFLWSVDEVLWKKLQLF 240
           GECN+LICTDVASRGLDIPSVDMVINYDIPSNSK                          
Sbjct: 298 GECNILICTDVASRGLDIPSVDMVINYDIPSNSK-------------------------- 357

Query: 241 FPRYLLFVLVVDVQSRLIGNGVENGDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK 300
                                    DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK
Sbjct: 358 -------------------------DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK 417

Query: 301 LIGKKLPQFSAQEEEVLMLLERVTEAKRISLMKIKETGGKKRRRGGGDDDD-DNNDVEKY 360
           LIGKKLPQFSAQEEEVLMLLERVTEAKRISLMKIKETGGKKRRRGG D+DD DNNDVEKY
Sbjct: 418 LIGKKLPQFSAQEEEVLMLLERVTEAKRISLMKIKETGGKKRRRGGDDEDDNDNNDVEKY 449

Query: 361 LRLKTG------KNGKMSKKLKRK 378
           LR KTG      KNGK SKK+KRK
Sbjct: 478 LR-KTGKGGKMSKNGKTSKKMKRK 449

[Close]

BLAST of Spg038063 vs. TAIR 10
Match: AT5G60990.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 460.7 bits (1184), Expect = 1.1e-129
Identity = 250/384 (65.10%), Postives = 290/384 (75.52%), Query Frame = 0


Query: 2   VQQAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEIL 61
           +QQ I L KRPH++V TPGRL DH+S+TKGFSL++LKYLVLDEADRLLNEDFEKS+++IL
Sbjct: 130 MQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQIL 189

Query: 62  NEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKEC 121
            EIP ER+T+LFSATMTKKVRKLQRACLRNPVKIEAA+KYSTVDTLKQQY F+ AKYK+C
Sbjct: 190 EEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVAAKYKDC 249

Query: 122 YLVYILTEMSGSTSMVFTRTCDATRLLSLVLRNLGLRAIPISGQMTQAKRLGALNKFKAG 181
           YLVYIL+EM  STSM+FTRTCD TR L+LVLR+LG RAIPISGQMTQ+KRLGALNKFKAG
Sbjct: 250 YLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKFKAG 309

Query: 182 ECNVLICTDVASRGLDIPSVDMVINYDIPSNSKEHYFWKQILGFLWSVDEVLWKKLQLFF 241
           ECN+L+CTDVASRGLDIPSVD+VINYDIP+NSK                           
Sbjct: 310 ECNILVCTDVASRGLDIPSVDVVINYDIPTNSK--------------------------- 369

Query: 242 PRYLLFVLVVDVQSRLIGNGVENGDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKL 301
                                   DYIHRVGRTARAGRSGV ISLVNQYELEWYIQIEKL
Sbjct: 370 ------------------------DYIHRVGRTARAGRSGVGISLVNQYELEWYIQIEKL 429

Query: 302 IGKKLPQFSAQEEEVLMLLERVTEAKRISLMKIKETGGKKRRRGGGDDDDDNNDVEKYL- 361
           IGKKLP++ A+E+EVL LLERV EAK++S M +KE+GG+KRR   G+DD+++   E++L 
Sbjct: 430 IGKKLPEYPAEEDEVLSLLERVAEAKKLSAMNMKESGGRKRR---GEDDEES---ERFLG 456

Query: 362 --------RLKTGKNGKMSKKLKR 377
                        K+ K SKK KR
Sbjct: 490 GNKDRGNKERGGNKDKKSSKKFKR 456

[Close]

BLAST of Spg038063 vs. TAIR 10
Match: AT1G16280.1 (RNA helicase 36 )

HSP 1 Score: 195.3 bits (495), Expect = 8.9e-50
Identity = 133/382 (34.82%), Postives = 199/382 (52.09%), Query Frame = 0


Query: 1   MVQQAINLAKRPHIVVGTPGRLVDHLSNTKGFS--LRTLKYLVLDEADRLLNEDFEKSID 60
           M+ Q ++L  RPHIV+ TPGR+   L N           K+LVLDEADR+L+  F+  + 
Sbjct: 166 MLTQTMSLVSRPHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELR 225

Query: 61  EILNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKY 120
            I   +P+ R+T LFSATMT  ++ L           EA     TVDTL QQ+ F     
Sbjct: 226 TIFQCLPKSRQTLLFSATMTSNLQALLEHSSNKAYFYEAYEGLKTVDTLTQQFIFEDKDA 285

Query: 121 KECYLVYILTEMSGS---TSMVFTRTCDATRLLSLVLRNLGLRAIPISGQMTQAKRLGAL 180
           KE YLV+IL++M      ++M+F  TC   + LSL+L  L +  I +    +Q+ RL AL
Sbjct: 286 KELYLVHILSQMEDKGIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSAL 345

Query: 181 NKFKAGECNVLICTDVASRGLDIPSVDMVINYDIPSNSKEHYFWKQILGFLWSVDEVLWK 240
           +KFK+G+  +L+ TDVASRGLDIP+VD+VINYDIP +                       
Sbjct: 346 SKFKSGKVPILLATDVASRGLDIPTVDLVINYDIPRD----------------------- 405

Query: 241 KLQLFFPRYLLFVLVVDVQSRLIGNGVENGDYIHRVGRTARAGRSGVAISLVNQYELEWY 300
                 PR                      DY+HRVGRTARAGR G+A+S++ + +++  
Sbjct: 406 ------PR----------------------DYVHRVGRTARAGRGGLAVSIITETDVKLI 465

Query: 301 IQIEKLIGKKLPQFSAQEEEVLMLLERVTEAKRISLMKIKETGGKKRRRGGGDDDDDNND 360
            +IE+ +GKK+  ++ +     + + +V++AKR+++MK+ + G           +D   D
Sbjct: 466 HKIEEEVGKKMEPYNKKVITDSLEVTKVSKAKRVAMMKMLDNG----------FEDKVKD 486

Query: 361 VEKYLRLKTGKNGKMSKKLKRK 378
             K  R      G + K+ KR+
Sbjct: 526 RRKLKRKTLADKGLLKKRGKRQ 486

[Close]

BLAST of Spg038063 vs. TAIR 10
Match: AT5G65900.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 167.9 bits (424), Expect = 1.5e-41
Identity = 110/316 (34.81%), Postives = 159/316 (50.32%), Query Frame = 0


Query: 8   LAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNEIPRE 67
           LAK  +++V TPGRL+DHL NT GF  + LK+LV+DEADR+L ++FE+ + +ILN +P+ 
Sbjct: 273 LAKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKT 332

Query: 68  RRTYLFSATMTKKVRKLQRACLRNPVKIEA--ATKYSTVDTLKQQYCFIPAKYKECYLVY 127
           R+T LFSAT + KV  L R  L +PV I+     K  T + L+Q YC +P+  +  +L+ 
Sbjct: 333 RQTSLFSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCVVPSAMRLLFLLT 392

Query: 128 ILTEMSGSTS-MVFTRTCDATRLLSLVLRNLGLRAIPISGQMTQAKRLGALNKFKAGECN 187
            L    G    MVF  TC +T+  + + R +    + I G + Q KR     +F   E  
Sbjct: 393 FLKRFQGKKKIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGIDQNKRTPTFLQFIKAETG 452

Query: 188 VLICTDVASRGLDIPSVDMVINYDIPSNSKEHYFWKQILGFLWSVDEVLWKKLQLFFPRY 247
           +L+CT+VA+RGLD P VD ++ YD P N                                
Sbjct: 453 ILLCTNVAARGLDFPHVDWIVQYDPPDNPT------------------------------ 512

Query: 248 LLFVLVVDVQSRLIGNGVENGDYIHRVGRTARA-GRSGVAISLVNQYELEWYIQIEKLIG 307
                                DYIHRVGRTAR  G  G A+ ++   EL++   I+ L  
Sbjct: 513 ---------------------DYIHRVGRTARGEGAKGKALLVLTPQELKF---IQYLKA 534

Query: 308 KKLPQFSAQEEEVLML 320
            K+P    + EE  +L
Sbjct: 573 AKIPVEEHEFEEKKLL 534

[Close]

BLAST of Spg038063 vs. TAIR 10
Match: AT3G18600.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 160.6 bits (405), Expect = 2.4e-39
Identity = 86/215 (40.00%), Postives = 129/215 (60.00%), Query Frame = 0


Query: 4   QAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 63
           +A  +A   ++V+ TPGRL+DHL NTK F  + LK LV+DEADR+L E+FE+ +++IL  
Sbjct: 204 EAQRIASGSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKI 263

Query: 64  IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEA--ATKYSTVDTLKQQYCFIPAKYKEC 123
           +P+ R+T LFSAT T KV+ L R  L +PV ++     +  T + L+Q YC +P+K +  
Sbjct: 264 LPKTRQTALFSATQTSKVKDLARVSLTSPVHVDVDDGRRKVTNEGLEQGYCVVPSKQRLI 323

Query: 124 YLVYILTEMSGSTSMVFTRTCDATRLLSLVLRNLGLRAIPISGQMTQAKRLGALNKFKAG 183
            L+  L +      MVF  TC + +  + +++   +    I G M Q +R      F   
Sbjct: 324 LLISFLKKNLNKKIMVFFSTCKSVQFHTEIMKISDVDVSDIHGGMDQNRRTKTFFDFMKA 383

Query: 184 ECNVLICTDVASRGLDIPSVDMVINYDIPSNSKEH 217
           +  +L+CTDVA+RGLDIPSVD +I YD P    E+
Sbjct: 384 KKGILLCTDVAARGLDIPSVDWIIQYDPPDKPTEY 418

[Close]

BLAST of Spg038063 vs. TAIR 10
Match: AT4G16630.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 152.1 bits (383), Expect = 8.7e-37
Identity = 105/326 (32.21%), Postives = 151/326 (46.32%), Query Frame = 0


Query: 3   QQAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILN 62
           +Q + L   P IVV TPGR++DHL N+    L  L  L+LDEADRLL   F   I E++ 
Sbjct: 280 EQEVVLRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVR 339

Query: 63  EIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFI---PAKYK 122
             P+ R+T LFSATMT++V++L +  L  P+++ A         L ++   I       +
Sbjct: 340 LCPKRRQTMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQ 399

Query: 123 ECYLVYILTEMSGSTSMVFTRTCDATRLLSLVLRNLGLRAIPISGQMTQAKRLGALNKFK 182
           E  L+ + T    S  ++F+ T  A   L ++    GL+A  + G +TQA+RL +L  F+
Sbjct: 400 EAVLLSLCTRTFKSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFR 459

Query: 183 AGECNVLICTDVASRGLDIPSVDMVINYDIPSNSKEHYFWKQILGFLWSVDEVLWKKLQL 242
             E + LI TDVA+RGLDI  V  VINY  P                             
Sbjct: 460 KQEVDFLIATDVAARGLDIIGVQTVINYACPR---------------------------- 519

Query: 243 FFPRYLLFVLVVDVQSRLIGNGVENGDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIE 302
                                  E   Y+HRVGRTARAGR G A++ V   +      I 
Sbjct: 520 -----------------------EIDSYVHRVGRTARAGREGYAVTFVTDSDRSLLKVIA 554

Query: 303 KLIGKKLPQFSAQEEEVLMLLERVTE 326
           K +G KL      E+ ++   + + E
Sbjct: 580 KKVGSKLKSRVIPEQSIVKWSQIIDE 554

The following BLAST results are available for this feature:

BLAST of Spg038063 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876108.1	4.8e-162	82.77	DEAD-box ATP-dependent RNA helicase 10 [Benincasa hispida]	[more]
XP_011654632.1	8.1e-162	82.03	DEAD-box ATP-dependent RNA helicase 10 [Cucumis sativus] >KGN49894.1 hypothetica...	[more]
XP_022957788.1	1.4e-161	82.28	DEAD-box ATP-dependent RNA helicase 10-like [Cucurbita moschata] >XP_022957789.1...	[more]
XP_008437560.1	3.1e-161	82.81	PREDICTED: DEAD-box ATP-dependent RNA helicase 10 [Cucumis melo] >KAA0042572.1 D...	[more]
XP_023534735.1	6.9e-161	82.01	DEAD-box ATP-dependent RNA helicase 10-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Spg038063 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GY84	1.6e-128	65.10	DEAD-box ATP-dependent RNA helicase 10 OS=Arabidopsis thaliana OX=3702 GN=RH10 P...	[more]
A2XKG2	7.8e-107	54.28	DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sativa subsp. indica OX=39946 GN...	[more]
Q7Y183	7.8e-107	54.28	DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q29S22	3.0e-98	51.87	Probable ATP-dependent RNA helicase DDX47 OS=Bos taurus OX=9913 GN=DDX47 PE=2 SV...	[more]
Q9CWX9	3.0e-98	52.00	Probable ATP-dependent RNA helicase DDX47 OS=Mus musculus OX=10090 GN=Ddx47 PE=2...	[more]

BLAST of Spg038063 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KM04	3.9e-162	82.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139720 PE=3 SV=1	[more]
A0A6J1K797	6.7e-162	82.28	DEAD-box ATP-dependent RNA helicase 10-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1H304	6.7e-162	82.28	DEAD-box ATP-dependent RNA helicase 10-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A5D3C6L0	1.5e-161	82.81	DEAD-box ATP-dependent RNA helicase 10 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3AUW6	1.5e-161	82.81	DEAD-box ATP-dependent RNA helicase 10 OS=Cucumis melo OX=3656 GN=LOC103482938 P...	[more]

BLAST of Spg038063 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60990.1	1.1e-129	65.10	DEA(D/H)-box RNA helicase family protein	[more]
AT1G16280.1	8.9e-50	34.82	RNA helicase 36	[more]
AT5G65900.1	1.5e-41	34.81	DEA(D/H)-box RNA helicase family protein	[more]
AT3G18600.1	2.4e-39	40.00	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT4G16630.1	8.7e-37	32.21	DEA(D/H)-box RNA helicase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 146..278 e-value: 1.4E-25 score: 101.0
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 122..278 e-value: 1.0E-26 score: 93.5
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 122..317 score: 17.908318
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 104..324 e-value: 2.2E-45 score: 155.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..103 e-value: 1.5E-34 score: 120.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 7..299
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 5..84 e-value: 8.3E-21 score: 74.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 337..364
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 337..377
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 2..216
None	No IPR available	PANTHER	PTHR24031:SF728	BNAC02G41920D PROTEIN	coord: 2..216
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 264..366
None	No IPR available	PANTHER	PTHR24031:SF728	BNAC02G41920D PROTEIN	coord: 264..366
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 107..287 e-value: 2.94698E-49 score: 160.365
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 41..49
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 1..95 score: 18.927912

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg038063.1	Spg038063.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003724	RNA helicase activity