Spg037916 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg037916
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	ras-related protein RABH1b
Location	scaffold12: 40329689 .. 40334315 (+)
RNA-Seq Expression	Spg037916
Synteny	Spg037916

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGGCACGCATTTTAGATCCTTAGCGAGTAGAGCGAAACTGAGCAGAATCCAGATCAAAGAAAGGAAGAACAAACTGGGCCAAAGGCCAGAGTTTCCATTGCAACTGACCTCGGCCTCATCGTCCCATTCAGAAATCTCCATCTCCATCGATAATTCTTCCTCTGTCGGAAAGGCTAATCAGAGATCTCTGCGGAAATGGCACCGACGTCAGCTCTGGCGAAGTATAAGCTGGTCTTTCTCGGAGACCAGTCTGTAGGAAAAACCAGCATCATTACACGCTTCATGTACGATAAATTCGATAATACTTATCAGGTAATTCCCTGCTGAATCGTCAATTGTGTAGATCCTTGTTTGTATCACACGTTGCGGCCGGATCGGTTCGGAAACTGTCACTGAATGTCTGATCCTGTCGTCTTCATCTTTAATTTTGATTTCTGTTGTTTTCATCTGCAGTTTTCCTTTGATTATATGCGGCTTTCTTTTTCTTGTTGCGTCTGGTTGTGTCATTGAGGAGGACGAGGACTCGGTGTTCATGTTTTTAGATCTTTTGGTTTTTATTCATAGGCGATCAGCATTTTCTTTGCTCACTGTGTATTTGTTTCAATATATTGGTTCTTAGTCAAGAGTTCAGTAATTAAGCAGAGTTAAGTCATGATTCTGACCTTGTTGCTTCCGGGTGAATTATGTCCAGATTTTAGCGTTGTTTGTTGCCAACAACATCAGTCTGTAGTAGTAGTATATCGAGTAAGCTTTGCAGGATTAGGATCGAAATGAGGAAGAGGGCGGATTCTCTTTGTTGCCTCGCTTTCAGCTAATTCAAATTTAGATCGTTATTCAGGAATCATGCTCTAACTTTTGTGGACTGAAAAGCTTTTTGGTCTTTACTTCCCCTATTTTACTTTGTTGGATTATTTGAAGAATACGTTGGGCTGTATTTGTATGATAAACAACCACTGTTTCATGACCCCGCATGTCAAATATTTAGTCCCTACCTCATGGAGTTGCGTGGGCATTGCTAATAATTCAATTGCTAACTTGATAGTGCAATTATGTGCTCCTTCCATGTATGGTAAAGATGCTTTGGTTGTCTGACACATTGACGAAGATTTATGATCATTTTCATGTTCAATTTGTAATTTTAATTACATCAAGTTGTTGCACAATGCACAGTATGATTTATTAAACACGAGGTGTCTAATGGATGGTAGATATATAGTTCCATGTCTCTTAGTATTTGTCTTTCTTTTTCTTTTTAATTTCTGCTGGATACTATGAAGCTCTTTTTAAATTTCAGTTTCAAATTCAATCCTCACATTCACCTCTTGCAATATATTAATTTCTATGCCATTGTTCAGGCTACAATTGGTATTGATTTTCTCTCAAAAACTATGTATCTTGAAGATCGCACTGTCCGACTGCAATTGTGGTAAGATACATTACATTTTACAGTTGTTCATATAAAGGTGACTACTTTCTATTGGTTTTACTAATTCACATTACTCTTCTACAAGAATTATAATTGAATCACATTTTGTGTTTGTATATTAAGCATGTAATTTATTTATTTTTCCTTGTGAAAGGAAGAACTTATTTGATTTATTTGCTTGAGTCCATGGTATAAATGATAGATTTCAACAACGTAAGTTTCATGGAAACAACCCAATAATCACTATTCCTCCTAGATTGAAACTGTTCTCTTTTGAAACTTGGAAATGAACTGCTAGGTGAAGTCCCTTGAGGAGGAAATCCAAAAATTCTGCATTTGGAATTCCTTTTTTGAAGGAATATTCCAAAAAATGATTGAACTGGTATGCTGTTCCCATCTGTAGACCGTAGACGTGGGAGACTCATTTGCTGCAATTAATGCTCTCTAACGTAGTATTCAGAATGAATTTATTAGAAATTTGAAAAAATATATTAGAAATTTCTTTTGGGAGGGATCAAATGAGAAACAAAGGGAAGAAAACACGATTAAAAGGTTTGAACAAATCTGCATCAGGGCAATGCCCCAAAAATAATGCGATCTCATAAAACAAAAAACAAAAACCTCTAGAAAGATTCTATTTTTCTTTTGAACCATAAAGTATAAGTAAAAGCTCCAATAAAACTCATCTCCAACAAAAAAAATTTGTCAAAACAAATGGGGAGCCATTTCATCGGAGTTTCATGGCTTCTTTTTGGGTTCTCTCGCGAGTCTTTTCTATTACAATCCTTTCTTTCTGAACATGGCTAGTTGGAGAGCCTTTATTATTATTATTTTGACTCCTAGGCCTGTCCACTTTTTGCCTTTTGTATCTGCTTCCACTCAAGGTTGAAAGGAGATACAGAAAAGCTCTCATGAACAAAAAATGGTGAATAATTATATAAGATTTTAGAAAACTAGACAAGGAACTAATTAGCTTCTATAAGAACTTCATTTAGAAACTAAGTAACGAGCAATATTTAATATATCTCTGCCATCTTTACATTTTCCATCAAATAAAAAATAATGATACAGTGTCCTAATCTAATTTGTCCTTTGTTTTGATGAGCAAGCACATCTTGTAAGATAATGTATTAATTTTGACTTTTGTGCACATAAATTTATGATACTTCTAATTCTATTTAATTGGAGCGACCAACTTTTCTTCATTTGTCCTTCCCAGAATAATTCGTTTTTCTGTACATTTTTAATTTTACGTCACTTTGTTTCTCAGGGACACTGCTGGACAGGAAAGATTCAGAAGTCTAATACCAAGCTATATCAGGGACTCATCTGTCGCTGTCATCGTTTATGATGTTGCAAGTATGGAATCTGAAATTTTCTATAGAATGAGAATAATTAAGCAAACCACTTGAAAATGTGTATTCTTTCCATGTGGATTTTTCATGGTTGATATTGTGATAAAATGTTTTGTATTCTCCTGGGGTGGATCTGGGTTTTGATATCGGAGCCTTTTAGGTTCTTAATCTCATATAATTACTAGATTGCATGCTGCGGAATCATTTCTGCTCCATGATGTGCTCAAAGGATTATTTTTAACTGTTTTCATCCTGTTGCTGCTTAGGCCGGCAGACTTTCCTAAACACTTCAAAATGGATTGAAGAGGTGCGCACTGAGAGGGGCAGTGATGTCATTATAGTGCTTGTTGGGAACAAAACAGATCTTGTGGAGAAGAGGTATTAGTTGGCCATGGATTTTGTTTCATGTGCACATTCTATCTCATCTGTAATTAGTTATGTCGGTAGCAAGGTTATGTCCAGAACTTTATAACAATTGTTTTCTTTTTGGAAAAAAAGTAGTTTGTTGTTGGCCACTCATTTTGCTATATGATTTCTGAATATAGCTTTCAAAATCAATCAAGCTTTGAATTTCATCTAGTTAAATATTGAACTTGGATGACCAATAAAATTAATATATTATAGAAGTTAATGAAATTAGAAGAAGAAACAAGTTCTTATAAAGTAAAAGTAGCAGGAAATACTTTTTAATTTAATATAGATCGTTTCTAATTTTTAAGAAATGGTACCAAATGGTTCCGACTAATTTACAATCAGCAGTCTGGGCTAATAAATATCATTACTAGGTGTATCTTTAGTGGATAATCTTACATTTATACTATATGTCTTGTGTGGTGTAAGAGTCAAATATTATGTTCATATAGAACATGATGCTGTGATCTACTGCTGTTCTTAATCCTATATTTTCAAAGAGAAAGAAGGTTTTAATTTTGATAAGCTTTTCTTTTTCTTTTTCTTTTTACATTACCAAGAAGTTTAGTCTTGTTTGGCATATTGCTTCACCATCTTCTCATATGCATGATTACTAGGCAAGTCTCTATAGAGGAAGGAGAAGCCAAAGCCCGTGAACTAAACGTCATGTTTATCGAAACTAGTGCAAAAGCTGGATTCAATATCAAGGTAAACTAATGATGCTTGCTTGGGAAATTGACGCAGAAGCTTTAGAATTACTTAATTCTTTGACAACGATTAAACTAAACTTTTGAAAAACCGCAATTTTCTTCTTAGTTTACGTTTACGGTCTTTCTAATGGCCAACCCAACCCTTTGCAGGCACTTTTCCGAAAAATTGCTGCAGCATTGCCGGGAATGGAAACTCTCTCTTCTACAAAACAAGAAGATATGGTCGATGTTAACCTGAAGTCCACAGGCAGTGGTGCAGCACAATCCCAGCCGCAGTCCGGTGGATGCGCCTGCTAATGAAGGCCGACATGAGGAATCACTCTTTCTTGCCTTTTGCTTTCAACACCTCAACCGTCTAGAACTGTGAGCATTCAGGTACGAGATGTGGTTATATCTTATCTATCAATGCTTGCTTGAGCTTCGTAAAATGTAATTGGTGGCAAGAGTAGACGACGACTGTTATTTTATGGAGTAATTTGATGTATTAGTGGAGTCAGTCATTATTTGGGTTTTGGGATTGATTTGGGAGAGATGTGTAAAAAATAGAAAATTATCTATCGGACTCGATTACAGAATTTTGCTTGTCTTGTAAGTTGTAATTTCATCCCTAGATATTCTGCAAATTTCATCTGTTTTTACAATGGATTACTGCCCTTGGTTCATATTAAATTCTGGCGTTCGTGTATGCCATGGTCTTATTTGGTTCATCAAGCTTTTGGTGGC

mRNA sequence

ATGGCACCGACGTCAGCTCTGGCGAAGTATAAGCTGGTCTTTCTCGGAGACCAGTCTGTAGGAAAAACCAGCATCATTACACGCTTCATGTACGATAAATTCGATAATACTTATCAGTTTTCCTTTGATTATATGCGGCTTTCTTTTTCTTATTTTAGCGTTGTTTGTTGCCAACAACATCAGTCTGTAGTAGTAGTATATCGAGCTACAATTGGTATTGATTTTCTCTCAAAAACTATGTATCTTGAAGATCGCACTGTCCGACTGCAATTGTGGGACACTGCTGGACAGGAAAGATTCAGAAGTCTAATACCAAGCTATATCAGGGACTCATCTGTCGCTGTCATCGTTTATGATGTTGCAAGCCGGCAGACTTTCCTAAACACTTCAAAATGGATTGAAGAGGTGCGCACTGAGAGGGGCAGTGATGTCATTATAGTGCTTGTTGGGAACAAAACAGATCTTGTGGAGAAGAGGCAAGTCTCTATAGAGGAAGGAGAAGCCAAAGCCCGTGAACTAAACGTCATGTTTATCGAAACTAGTGCAAAAGCTGGATTCAATATCAAGGCACTTTTCCGAAAAATTGCTGCAGCATTGCCGGGAATGGAAACTCTCTCTTCTACAAAACAAGAAGATATGGTCGATGTTAACCTGAAGTCCACAGGCAGTGGTGCAGCACAATCCCAGCCGCAGTCCGGTGGATGCGCCTGCTAA

Coding sequence (CDS)

ATGGCACCGACGTCAGCTCTGGCGAAGTATAAGCTGGTCTTTCTCGGAGACCAGTCTGTAGGAAAAACCAGCATCATTACACGCTTCATGTACGATAAATTCGATAATACTTATCAGTTTTCCTTTGATTATATGCGGCTTTCTTTTTCTTATTTTAGCGTTGTTTGTTGCCAACAACATCAGTCTGTAGTAGTAGTATATCGAGCTACAATTGGTATTGATTTTCTCTCAAAAACTATGTATCTTGAAGATCGCACTGTCCGACTGCAATTGTGGGACACTGCTGGACAGGAAAGATTCAGAAGTCTAATACCAAGCTATATCAGGGACTCATCTGTCGCTGTCATCGTTTATGATGTTGCAAGCCGGCAGACTTTCCTAAACACTTCAAAATGGATTGAAGAGGTGCGCACTGAGAGGGGCAGTGATGTCATTATAGTGCTTGTTGGGAACAAAACAGATCTTGTGGAGAAGAGGCAAGTCTCTATAGAGGAAGGAGAAGCCAAAGCCCGTGAACTAAACGTCATGTTTATCGAAACTAGTGCAAAAGCTGGATTCAATATCAAGGCACTTTTCCGAAAAATTGCTGCAGCATTGCCGGGAATGGAAACTCTCTCTTCTACAAAACAAGAAGATATGGTCGATGTTAACCTGAAGTCCACAGGCAGTGGTGCAGCACAATCCCAGCCGCAGTCCGGTGGATGCGCCTGCTAA

Protein sequence

MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQFSFDYMRLSFSYFSVVCCQQHQSVVVVYRATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQSGGCAC

Homology

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BLAST of Spg037916 vs. NCBI nr
Match: XP_038889006.1 (ras-related protein RABH1b [Benincasa hispida])

HSP 1 Score: 383.3 bits (983), Expect = 1.6e-102
Identity = 208/237 (87.76%), Postives = 208/237 (87.76%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQFSFDYMRLSFSYFSVVCCQQH 60
           MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQ                     
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQ--------------------- 60

Query: 61  QSVVVVYRATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120
                   ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV
Sbjct: 61  --------ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120

Query: 121 ASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIET 180
           ASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIET
Sbjct: 121 ASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIET 180

Query: 181 SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQSGGCAC 238
           SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQSGGCAC
Sbjct: 181 SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQSGGCAC 208

[Close]

BLAST of Spg037916 vs. NCBI nr
Match: XP_022996115.1 (ras-related protein RABH1b [Cucurbita maxima])

HSP 1 Score: 381.7 bits (979), Expect = 4.5e-102
Identity = 206/237 (86.92%), Postives = 208/237 (87.76%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQFSFDYMRLSFSYFSVVCCQQH 60
           MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQ                     
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQ--------------------- 60

Query: 61  QSVVVVYRATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120
                   ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV
Sbjct: 61  --------ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120

Query: 121 ASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIET 180
           ASRQTF+NTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVS+EEGEAKARELNVMFIET
Sbjct: 121 ASRQTFVNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSVEEGEAKARELNVMFIET 180

Query: 181 SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQSGGCAC 238
           SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQSGGCAC
Sbjct: 181 SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQSGGCAC 208

[Close]

BLAST of Spg037916 vs. NCBI nr
Match: XP_004148503.1 (ras-related protein RABH1b [Cucumis sativus] >XP_008465921.1 PREDICTED: ras-related protein RABH1b [Cucumis melo] >KAA0038529.1 ras-related protein RABH1b-like isoform X1 [Cucumis melo var. makuwa] >KGN60432.1 hypothetical protein Csa_001061 [Cucumis sativus] >TYK31126.1 ras-related protein RABH1b-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 380.9 bits (977), Expect = 7.8e-102
Identity = 207/237 (87.34%), Postives = 207/237 (87.34%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQFSFDYMRLSFSYFSVVCCQQH 60
           MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQ                     
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQ--------------------- 60

Query: 61  QSVVVVYRATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120
                   ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV
Sbjct: 61  --------ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120

Query: 121 ASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIET 180
           ASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIET
Sbjct: 121 ASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIET 180

Query: 181 SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQSGGCAC 238
           SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQS GCAC
Sbjct: 181 SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQSSGCAC 208

[Close]

BLAST of Spg037916 vs. NCBI nr
Match: XP_022958673.1 (ras-related protein RABH1b [Cucurbita moschata] >XP_023533385.1 ras-related protein RABH1b [Cucurbita pepo subsp. pepo] >KAG6606223.1 Ras-related protein RABH1b, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 380.2 bits (975), Expect = 1.3e-101
Identity = 205/237 (86.50%), Postives = 208/237 (87.76%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQFSFDYMRLSFSYFSVVCCQQH 60
           MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQ                     
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQ--------------------- 60

Query: 61  QSVVVVYRATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120
                   ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV
Sbjct: 61  --------ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120

Query: 121 ASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIET 180
           ASRQTF+NTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVS+EEGEAKARELNVMFIET
Sbjct: 121 ASRQTFVNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSVEEGEAKARELNVMFIET 180

Query: 181 SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQSGGCAC 238
           SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKS+GSGAAQSQPQSGGCAC
Sbjct: 181 SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSSGSGAAQSQPQSGGCAC 208

[Close]

BLAST of Spg037916 vs. NCBI nr
Match: KAG7036170.1 (Ras-related protein RABH1b, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 380.2 bits (975), Expect = 1.3e-101
Identity = 205/237 (86.50%), Postives = 208/237 (87.76%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQFSFDYMRLSFSYFSVVCCQQH 60
           MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQ                     
Sbjct: 45  MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQ--------------------- 104

Query: 61  QSVVVVYRATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120
                   ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV
Sbjct: 105 --------ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 164

Query: 121 ASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIET 180
           ASRQTF+NTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVS+EEGEAKARELNVMFIET
Sbjct: 165 ASRQTFVNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSVEEGEAKARELNVMFIET 224

Query: 181 SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQSGGCAC 238
           SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKS+GSGAAQSQPQSGGCAC
Sbjct: 225 SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSSGSGAAQSQPQSGGCAC 252

[Close]

BLAST of Spg037916 vs. ExPASy Swiss-Prot
Match: O80501 (Ras-related protein RABH1b OS=Arabidopsis thaliana OX=3702 GN=RABH1B PE=1 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 1.6e-97
Identity = 192/237 (81.01%), Postives = 202/237 (85.23%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQFSFDYMRLSFSYFSVVCCQQH 60
           MAP SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQ                     
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQ--------------------- 60

Query: 61  QSVVVVYRATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120
                   ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV
Sbjct: 61  --------ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120

Query: 121 ASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIET 180
           ASRQ+FLNT+KWI+EVRTERGSDVI+VLVGNKTDLV+KRQVSIEE EAKARELNVMFIET
Sbjct: 121 ASRQSFLNTTKWIDEVRTERGSDVIVVLVGNKTDLVDKRQVSIEEAEAKARELNVMFIET 180

Query: 181 SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQSGGCAC 238
           SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKS+ + A+ +Q QSGGC+C
Sbjct: 181 SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSSNANASLAQQQSGGCSC 208

[Close]

BLAST of Spg037916 vs. ExPASy Swiss-Prot
Match: Q9LFT9 (Ras-related protein RABH1e OS=Arabidopsis thaliana OX=3702 GN=RABH1E PE=2 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 1.3e-91
Identity = 185/237 (78.06%), Postives = 194/237 (81.86%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQFSFDYMRLSFSYFSVVCCQQH 60
           MA  S LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQ                     
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQ--------------------- 60

Query: 61  QSVVVVYRATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120
                   ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV
Sbjct: 61  --------ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120

Query: 121 ASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIET 180
           A+RQ+FLNTSKWIE+VRTERGSDVIIVLVGNKTDLV+KRQVSIEEG+ KAR+  V+FIET
Sbjct: 121 ANRQSFLNTSKWIEDVRTERGSDVIIVLVGNKTDLVDKRQVSIEEGDNKARDYGVIFIET 180

Query: 181 SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQSGGCAC 238
           SAKAGFNIK LFRKIAAALPGMETLSSTKQEDMVDVNLK T S +AQ + Q GGCAC
Sbjct: 181 SAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLK-TSSNSAQGEQQRGGCAC 207

[Close]

BLAST of Spg037916 vs. ExPASy Swiss-Prot
Match: Q9SID8 (Ras-related protein RABH1d OS=Arabidopsis thaliana OX=3702 GN=RABH1D PE=3 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 9.6e-87
Identity = 176/237 (74.26%), Postives = 186/237 (78.48%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQFSFDYMRLSFSYFSVVCCQQH 60
           MA  S LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQ                     
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQ--------------------- 60

Query: 61  QSVVVVYRATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120
                   ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYDV
Sbjct: 61  --------ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDV 120

Query: 121 ASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIET 180
           A+R +FLNTSKWIEEVR ER  DVIIVLVGNKTDLVEKRQVSIEEG++K RE  VMFIET
Sbjct: 121 ANRLSFLNTSKWIEEVRNERAGDVIIVLVGNKTDLVEKRQVSIEEGDSKGREYGVMFIET 180

Query: 181 SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQSGGCAC 238
           SAKAGFNIK LFRKIAAALPGME+ S+TK EDMVDVNLK T S ++Q   Q G C+C
Sbjct: 181 SAKAGFNIKPLFRKIAAALPGMESYSNTKNEDMVDVNLKPT-SNSSQGDQQGGACSC 207

[Close]

BLAST of Spg037916 vs. ExPASy Swiss-Prot
Match: Q9SMR4 (Ras-related protein RABH1c OS=Arabidopsis thaliana OX=3702 GN=RABH1C PE=1 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 8.7e-80
Identity = 169/244 (69.26%), Postives = 187/244 (76.64%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQFSFDYMRLSFSYFSVVCCQQH 60
           MA  S LAK+KLVFLGDQSVGKTSIITRFMYDKFD TYQ                     
Sbjct: 1   MASVSPLAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQ--------------------- 60

Query: 61  QSVVVVYRATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120
                    TIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVA++VYDV
Sbjct: 61  --------PTIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIVVYDV 120

Query: 121 ASRQTFLNTSKWIEEVRTERG-SDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIE 180
           ++RQTFLNTSKWIE+V  ERG S+VIIVLVGNKTDLVEKRQVSI EGE K +E  VMFIE
Sbjct: 121 SNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTDLVEKRQVSISEGEDKGKEYGVMFIE 180

Query: 181 TSAKAGFNIKALFRKIAAALPGMETLS-STKQEDMVDVNLKSTGSGAAQSQPQ-----SG 238
           TSAK  FNIKALFRKIAAALPG+++ S +TK +DMVDVNLK+T S ++Q + Q      G
Sbjct: 181 TSAKENFNIKALFRKIAAALPGVDSYSLATKSDDMVDVNLKTT-SNSSQGEQQGGAGGGG 214

[Close]

BLAST of Spg037916 vs. ExPASy Swiss-Prot
Match: P20340 (Ras-related protein Rab-6A OS=Homo sapiens OX=9606 GN=RAB6A PE=1 SV=3)

HSP 1 Score: 288.1 bits (736), Expect = 9.0e-77
Identity = 153/232 (65.95%), Postives = 177/232 (76.29%), Query Frame = 0


Query: 7   LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQFSFDYMRLSFSYFSVVCCQQHQSVVVV 66
           L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQ                           
Sbjct: 11  LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQ--------------------------- 70

Query: 67  YRATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTF 126
             ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDS+VAV+VYD+ +  +F
Sbjct: 71  --ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSF 130

Query: 127 LNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGF 186
             T+KWI++VRTERGSDVII+LVGNKTDL +KRQVSIEEGE KA+ELNVMFIETSAKAG+
Sbjct: 131 QQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGY 190

Query: 187 NIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQS-GGCAC 238
           N+K LFR++AAALPGME+     +EDM+D+ L+       Q QP S GGC+C
Sbjct: 191 NVKQLFRRVAAALPGMESTQDRSREDMIDIKLEK-----PQEQPVSEGGCSC 208

[Close]

BLAST of Spg037916 vs. ExPASy TrEMBL
Match: A0A6J1K5U1 (ras-related protein RABH1b OS=Cucurbita maxima OX=3661 GN=LOC111491433 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 2.2e-102
Identity = 206/237 (86.92%), Postives = 208/237 (87.76%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQFSFDYMRLSFSYFSVVCCQQH 60
           MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQ                     
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQ--------------------- 60

Query: 61  QSVVVVYRATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120
                   ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV
Sbjct: 61  --------ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120

Query: 121 ASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIET 180
           ASRQTF+NTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVS+EEGEAKARELNVMFIET
Sbjct: 121 ASRQTFVNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSVEEGEAKARELNVMFIET 180

Query: 181 SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQSGGCAC 238
           SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQSGGCAC
Sbjct: 181 SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQSGGCAC 208

[Close]

BLAST of Spg037916 vs. ExPASy TrEMBL
Match: A0A5A7TB19 (Ras-related protein RABH1b-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004050 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 3.8e-102
Identity = 207/237 (87.34%), Postives = 207/237 (87.34%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQFSFDYMRLSFSYFSVVCCQQH 60
           MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQ                     
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQ--------------------- 60

Query: 61  QSVVVVYRATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120
                   ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV
Sbjct: 61  --------ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120

Query: 121 ASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIET 180
           ASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIET
Sbjct: 121 ASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIET 180

Query: 181 SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQSGGCAC 238
           SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQS GCAC
Sbjct: 181 SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQSSGCAC 208

[Close]

BLAST of Spg037916 vs. ExPASy TrEMBL
Match: A0A0A0LI95 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G910690 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 3.8e-102
Identity = 207/237 (87.34%), Postives = 207/237 (87.34%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQFSFDYMRLSFSYFSVVCCQQH 60
           MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQ                     
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQ--------------------- 60

Query: 61  QSVVVVYRATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120
                   ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV
Sbjct: 61  --------ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120

Query: 121 ASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIET 180
           ASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIET
Sbjct: 121 ASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIET 180

Query: 181 SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQSGGCAC 238
           SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQS GCAC
Sbjct: 181 SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQSSGCAC 208

[Close]

BLAST of Spg037916 vs. ExPASy TrEMBL
Match: A0A1S3CQC2 (ras-related protein RABH1b OS=Cucumis melo OX=3656 GN=LOC103503500 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 3.8e-102
Identity = 207/237 (87.34%), Postives = 207/237 (87.34%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQFSFDYMRLSFSYFSVVCCQQH 60
           MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQ                     
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQ--------------------- 60

Query: 61  QSVVVVYRATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120
                   ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV
Sbjct: 61  --------ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120

Query: 121 ASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIET 180
           ASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIET
Sbjct: 121 ASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIET 180

Query: 181 SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQSGGCAC 238
           SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQS GCAC
Sbjct: 181 SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQSSGCAC 208

[Close]

BLAST of Spg037916 vs. ExPASy TrEMBL
Match: A0A6J1H3Q8 (ras-related protein RABH1b OS=Cucurbita moschata OX=3662 GN=LOC111459827 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 6.4e-102
Identity = 205/237 (86.50%), Postives = 208/237 (87.76%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQFSFDYMRLSFSYFSVVCCQQH 60
           MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQ                     
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQ--------------------- 60

Query: 61  QSVVVVYRATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120
                   ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV
Sbjct: 61  --------ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120

Query: 121 ASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIET 180
           ASRQTF+NTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVS+EEGEAKARELNVMFIET
Sbjct: 121 ASRQTFVNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSVEEGEAKARELNVMFIET 180

Query: 181 SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQSGGCAC 238
           SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKS+GSGAAQSQPQSGGCAC
Sbjct: 181 SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSSGSGAAQSQPQSGGCAC 208

[Close]

BLAST of Spg037916 vs. TAIR 10
Match: AT2G44610.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 357.1 bits (915), Expect = 1.1e-98
Identity = 192/237 (81.01%), Postives = 202/237 (85.23%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQFSFDYMRLSFSYFSVVCCQQH 60
           MAP SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQ                     
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQ--------------------- 60

Query: 61  QSVVVVYRATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120
                   ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV
Sbjct: 61  --------ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120

Query: 121 ASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIET 180
           ASRQ+FLNT+KWI+EVRTERGSDVI+VLVGNKTDLV+KRQVSIEE EAKARELNVMFIET
Sbjct: 121 ASRQSFLNTTKWIDEVRTERGSDVIVVLVGNKTDLVDKRQVSIEEAEAKARELNVMFIET 180

Query: 181 SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQSGGCAC 238
           SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKS+ + A+ +Q QSGGC+C
Sbjct: 181 SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSSNANASLAQQQSGGCSC 208

[Close]

BLAST of Spg037916 vs. TAIR 10
Match: AT5G10260.1 (RAB GTPase homolog H1E )

HSP 1 Score: 337.4 bits (864), Expect = 9.2e-93
Identity = 185/237 (78.06%), Postives = 194/237 (81.86%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQFSFDYMRLSFSYFSVVCCQQH 60
           MA  S LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQ                     
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQ--------------------- 60

Query: 61  QSVVVVYRATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120
                   ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV
Sbjct: 61  --------ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120

Query: 121 ASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIET 180
           A+RQ+FLNTSKWIE+VRTERGSDVIIVLVGNKTDLV+KRQVSIEEG+ KAR+  V+FIET
Sbjct: 121 ANRQSFLNTSKWIEDVRTERGSDVIIVLVGNKTDLVDKRQVSIEEGDNKARDYGVIFIET 180

Query: 181 SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQSGGCAC 238
           SAKAGFNIK LFRKIAAALPGMETLSSTKQEDMVDVNLK T S +AQ + Q GGCAC
Sbjct: 181 SAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLK-TSSNSAQGEQQRGGCAC 207

[Close]

BLAST of Spg037916 vs. TAIR 10
Match: AT2G22290.1 (RAB GTPase homolog H1D )

HSP 1 Score: 321.2 bits (822), Expect = 6.8e-88
Identity = 176/237 (74.26%), Postives = 186/237 (78.48%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQFSFDYMRLSFSYFSVVCCQQH 60
           MA  S LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQ                     
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQ--------------------- 60

Query: 61  QSVVVVYRATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120
                   ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYDV
Sbjct: 61  --------ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDV 120

Query: 121 ASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIET 180
           A+R +FLNTSKWIEEVR ER  DVIIVLVGNKTDLVEKRQVSIEEG++K RE  VMFIET
Sbjct: 121 ANRLSFLNTSKWIEEVRNERAGDVIIVLVGNKTDLVEKRQVSIEEGDSKGREYGVMFIET 180

Query: 181 SAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQSGGCAC 238
           SAKAGFNIK LFRKIAAALPGME+ S+TK EDMVDVNLK T S ++Q   Q G C+C
Sbjct: 181 SAKAGFNIKPLFRKIAAALPGMESYSNTKNEDMVDVNLKPT-SNSSQGDQQGGACSC 207

[Close]

BLAST of Spg037916 vs. TAIR 10
Match: AT4G39890.1 (RAB GTPase homolog H1C )

HSP 1 Score: 298.1 bits (762), Expect = 6.2e-81
Identity = 169/244 (69.26%), Postives = 187/244 (76.64%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQFSFDYMRLSFSYFSVVCCQQH 60
           MA  S LAK+KLVFLGDQSVGKTSIITRFMYDKFD TYQ                     
Sbjct: 1   MASVSPLAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQ--------------------- 60

Query: 61  QSVVVVYRATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV 120
                    TIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVA++VYDV
Sbjct: 61  --------PTIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIVVYDV 120

Query: 121 ASRQTFLNTSKWIEEVRTERG-SDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIE 180
           ++RQTFLNTSKWIE+V  ERG S+VIIVLVGNKTDLVEKRQVSI EGE K +E  VMFIE
Sbjct: 121 SNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTDLVEKRQVSISEGEDKGKEYGVMFIE 180

Query: 181 TSAKAGFNIKALFRKIAAALPGMETLS-STKQEDMVDVNLKSTGSGAAQSQPQ-----SG 238
           TSAK  FNIKALFRKIAAALPG+++ S +TK +DMVDVNLK+T S ++Q + Q      G
Sbjct: 181 TSAKENFNIKALFRKIAAALPGVDSYSLATKSDDMVDVNLKTT-SNSSQGEQQGGAGGGG 214

[Close]

BLAST of Spg037916 vs. TAIR 10
Match: AT5G64990.1 (RAB GTPase homolog H1A )

HSP 1 Score: 272.7 bits (696), Expect = 2.8e-73
Identity = 151/228 (66.23%), Postives = 165/228 (72.37%), Query Frame = 0


Query: 10  YKLVFLGDQSVGKTSIITRFMYDKFDNTYQFSFDYMRLSFSYFSVVCCQQHQSVVVVYRA 69
           YKLVFLGDQ VGKTSIIT FMY KFD +YQ                             A
Sbjct: 8   YKLVFLGDQGVGKTSIITCFMYGKFDTSYQ-----------------------------A 67

Query: 70  TIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNT 129
           TIGIDFLSKT   EDRT RLQLWDTAGQERF+SL+PSYIRDSSVAVIVYDVAS+Q+F+NT
Sbjct: 68  TIGIDFLSKTTRYEDRTFRLQLWDTAGQERFKSLVPSYIRDSSVAVIVYDVASKQSFINT 127

Query: 130 SKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIK 189
           SKWIEEVR ERGS VIIVLVGNKTDLV KRQVSIEEGE KARE   +F+ETSAKAGFNIK
Sbjct: 128 SKWIEEVRAERGSYVIIVLVGNKTDLVNKRQVSIEEGENKAREFGALFMETSAKAGFNIK 187

Query: 190 ALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQSGGCAC 238
            LF KI +AL G E +S TKQED+VDVNLK     +  +  Q   C+C
Sbjct: 188 PLFCKITSALQGNEAVSWTKQEDLVDVNLKPLMFSSQANHQQESNCSC 206

The following BLAST results are available for this feature:

BLAST of Spg037916 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889006.1	1.6e-102	87.76	ras-related protein RABH1b [Benincasa hispida]	[more]
XP_022996115.1	4.5e-102	86.92	ras-related protein RABH1b [Cucurbita maxima]	[more]
XP_004148503.1	7.8e-102	87.34	ras-related protein RABH1b [Cucumis sativus] >XP_008465921.1 PREDICTED: ras-rela...	[more]
XP_022958673.1	1.3e-101	86.50	ras-related protein RABH1b [Cucurbita moschata] >XP_023533385.1 ras-related prot...	[more]
KAG7036170.1	1.3e-101	86.50	Ras-related protein RABH1b, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Spg037916 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80501	1.6e-97	81.01	Ras-related protein RABH1b OS=Arabidopsis thaliana OX=3702 GN=RABH1B PE=1 SV=1	[more]
Q9LFT9	1.3e-91	78.06	Ras-related protein RABH1e OS=Arabidopsis thaliana OX=3702 GN=RABH1E PE=2 SV=1	[more]
Q9SID8	9.6e-87	74.26	Ras-related protein RABH1d OS=Arabidopsis thaliana OX=3702 GN=RABH1D PE=3 SV=1	[more]
Q9SMR4	8.7e-80	69.26	Ras-related protein RABH1c OS=Arabidopsis thaliana OX=3702 GN=RABH1C PE=1 SV=1	[more]
P20340	9.0e-77	65.95	Ras-related protein Rab-6A OS=Homo sapiens OX=9606 GN=RAB6A PE=1 SV=3	[more]

BLAST of Spg037916 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K5U1	2.2e-102	86.92	ras-related protein RABH1b OS=Cucurbita maxima OX=3661 GN=LOC111491433 PE=4 SV=1	[more]
A0A5A7TB19	3.8e-102	87.34	Ras-related protein RABH1b-like isoform X1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0LI95	3.8e-102	87.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G910690 PE=4 SV=1	[more]
A0A1S3CQC2	3.8e-102	87.34	ras-related protein RABH1b OS=Cucumis melo OX=3656 GN=LOC103503500 PE=4 SV=1	[more]
A0A6J1H3Q8	6.4e-102	86.50	ras-related protein RABH1b OS=Cucurbita moschata OX=3662 GN=LOC111459827 PE=4 SV...	[more]

BLAST of Spg037916 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44610.1	1.1e-98	81.01	Ras-related small GTP-binding family protein	[more]
AT5G10260.1	9.2e-93	78.06	RAB GTPase homolog H1E	[more]
AT2G22290.1	6.8e-88	74.26	RAB GTPase homolog H1D	[more]
AT4G39890.1	6.2e-81	69.26	RAB GTPase homolog H1C	[more]
AT5G64990.1	2.8e-73	66.23	RAB GTPase homolog H1A	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 177..199 score: 36.17 coord: 10..31 score: 41.61 coord: 142..155 score: 53.75 coord: 80..102 score: 48.05
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 7..202 e-value: 8.1E-22 score: 88.5
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 48..237 e-value: 0.0011 score: 4.2
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 10..202 e-value: 5.6E-73 score: 258.4
None	No IPR available	PFAM	PF08477	Roc	coord: 11..42 e-value: 3.4E-7 score: 30.5
None	No IPR available	PANTHER	PTHR24073:SF1132	GTP-BINDING PROTEIN RAB6	coord: 1..237
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 1..237
None	No IPR available	PROSITE	PS51419	RAB	coord: 2..237 score: 29.328678
None	No IPR available	PROSITE	PS51420	RHO	coord: 3..205 score: 10.500298
None	No IPR available	CDD	cd01861	Rab6	coord: 10..199 e-value: 5.88027E-110 score: 311.093
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 12..201 e-value: 3.0E-13 score: 49.5
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 64..198 e-value: 1.0E-44 score: 152.0
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 5..237 score: 17.023996
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 5..231 e-value: 1.4E-62 score: 212.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..211
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 9..195 e-value: 2.0E-22 score: 77.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg037916.1	Spg037916.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
biological_process	GO:0042147	retrograde transport, endosome to Golgi
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding