Spg037896 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg037896
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	60S ribosomal protein L37a
Location	scaffold12: 40013098 .. 40015418 (-)
RNA-Seq Expression	Spg037896
Synteny	Spg037896

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGGATCAAGGCGACCCGCTTTGTTCGACCCGTTTTAACCGGGCCTCTGGCCTTATTATTGTAAAGGAAAATTTCTATTCTAGGGTTTCTCAGATTCAAGTTCTTCACACTTTCACCAAATCTTCTTCCGGAGATCTTGTGTCAGCCAAGCAGCAATGGTAATTCCTCTCCCTTCGATTCATTGGGCGTTAAAATTTTCGACTCTCTCTGTTTCTGCGAAGAGATTTTTCTCTGAAAATTATTCACTTTATTTGTTCTTACTCTTCTGTTGGACATACTTTGTCTTGTTCTTGCTATCGGAAATTAAATTGTTTTCTTGAAGAATTTGAGGTGTGCTCCTTTTTTTTCTAATAGGTGAAATTCTGCCCCGTTTTATGAAATTTCCATGATTCGGGTTGACTGTTATGTTTCTATTGGGCACCGGAATATTGTATTGTTAATTTCTGTTCAACTGTTCTAGTTATGTTTGTTTTTTATTGAAGGTAACCTGAGTGATCGAGCTTCTGTTACCGTCTTTTTTTCCTTAAAATTGGAATTGGTGACATTGGATTACAGCAGTACAGGATCATAGCTTGTATAGATAGGAAAAGAGAATGCAATAAGTCTTGGAATTTGTAAATGTATGACGACTCACTAGTATTTTGGTTTAAATTTATCTTTGACAACCGTGTTGAACTCCAAAGGTGGTTATTATCTGTAGCCTTATTAAGTGTCATCACTGTCTGACTGATGCTCCATAAAAGGATTAAGTGCTTTTTGATGCAATTAACGTGTATTTGAACTTTGAAGTTTGGTGGTTTTGGTTGTTGATATGGTTGGGGTGTGGAAACTGCCAAGAGTTCAGTAGAATTGTGTTGCTTGCCTCCAACTTAGTTGTTTCTCTTACCCTAAACCCTAAACCCTAAACCCTGGATTTCTTCTACTATGTATTGAAATGCTTAACATTCTTTTGGTTAGAATTGACTATCGAGTATTTCATTCATATTTTTTGATGTACTATGTTTTAGACTGATGAATTTCTTTTTACACAGACAAAGAGAACCAAGAAGGCAGGCATTGTTGGAAAATATGGTAATATTTGAAAATTCAGTTTACGCTTGATATTTTTAGTATCTTGGAGTTCACATGACTATTTTTCCAGAGAGAGTTTGTTTTCTATTATCGTTATTCTGCATCTATTCCAGTAATCCAGTCTGAAGCTATTTACTTTTATCCTGCCCTAGATACCATCCAGGGAATTTTCAATGAGTTTCTTGATTCCTCTGATAGAATACTACCCTAGTATCCTGTTTGAGCCCTATTGTTTTCTAGTAGTTTTATCTGTTTGGTTTTCTTTTTAGAAAAGTCATGGACGACTTTTAGAGATATAGTGATAAGTCACAGAGGTTATTAGGACCAAAGAAAGAGTTTCCTCTTTAGAAACCAAACCTTCAAAACGAATTGCCTGTCTTGGGACTAAAAATAAAATGGCACCATTGATACGATGGCTTTGGTGGTCAGATTTCCTTAAAAATGTTTTGTGAAATGTGGCACGAGCACAATATACATCAAAATCATCAGCAAACCGAATCGCTTGATCTTTGAAGATCTCTGCATGGTATTGGGATTATGAGTCCAGATCTGTGTACACTCTAGCTGGCTCACTAGTTTGCATGGAGAATCTTCTATTTCCTTCTTCTTCTCATAACTTTGGGCGATAACAGGTACCCGATACGGTGCCAGTCTGAGAAAGCAGATTAAGAAGATGGAAGTCAGTCAGCACAGTAAATACTTCTGTGAGTTCTGTGGAAAGGCAAGTAGTTTTCCTTATTTTACCCAAGTTTTCGTTTCCTAGTCACTTCTTCATGTTCCAATTATATGCTTCCCCATTGCAGTATGCAGTGAAGAGGAAGGCAGTCGGAATTTGGGGCTGCAAAGATTGTGGTAAAGTGAAAGCCGGCGGTGCCTACACTCTCAAGTAACTATACATCTTATTTTTCTTTGGTTTTTTCTTCATTTTTTGTTATATAAATTTAAATGACTTTCATCTTGATGTTATTTTTGGTGCCTTTGGCAGCACTGCTAGTGCTGTGACAGTGAGAAGCACTATCAGGAGGCTGAGAGAACAGACTGAAAGTTAAATCCATCTTCACTGCTTATTTAACCCTTTTTTGAAGGAAAAAGATTGCTCCCTCTCTAGACTTCTCTTCATATCAATGTTGTAGGAATTGGTTATTTAATGTTAAGTGAAACTGATCCTTTTCTCCCCTTGATATACTGGCCAATATCTTGTAATGGATTCTATTGATCTTCAATTGAGTTTTACTTGAGTTACATATTTG

mRNA sequence

CCGGATCAAGGCGACCCGCTTTGTTCGACCCGTTTTAACCGGGCCTCTGGCCTTATTATTGTAAAGGAAAATTTCTATTCTAGGGTTTCTCAGATTCAAGTTCTTCACACTTTCACCAAATCTTCTTCCGGAGATCTTGTGTCAGCCAAGCAGCAATGTTATGTTTGTTTTTTATTGAAGACAAAGAGAACCAAGAAGGCAGGCATTGTTGGAAAATATGGTACCCGATACGGTGCCAGTCTGAGAAAGCAGATTAAGAAGATGGAAGTCAGTCAGCACAGTAAATACTTCTGTGAGTTCTGTGGAAAGGCAAGTAGTTTTCCTTATTTTACCCAATATGCAGTGAAGAGGAAGGCAGTCGGAATTTGGGGCTGCAAAGATTGTGGTAAAGTGAAAGCCGGCGGTGCCTACACTCTCAACACTGCTAGTGCTGTGACAGTGAGAAGCACTATCAGGAGGCTGAGAGAACAGACTGAAAGTTAA

Coding sequence (CDS)

CCGGATCAAGGCGACCCGCTTTGTTCGACCCGTTTTAACCGGGCCTCTGGCCTTATTATTGTAAAGGAAAATTTCTATTCTAGGGTTTCTCAGATTCAAGTTCTTCACACTTTCACCAAATCTTCTTCCGGAGATCTTGTGTCAGCCAAGCAGCAATGTTATGTTTGTTTTTTATTGAAGACAAAGAGAACCAAGAAGGCAGGCATTGTTGGAAAATATGGTACCCGATACGGTGCCAGTCTGAGAAAGCAGATTAAGAAGATGGAAGTCAGTCAGCACAGTAAATACTTCTGTGAGTTCTGTGGAAAGGCAAGTAGTTTTCCTTATTTTACCCAATATGCAGTGAAGAGGAAGGCAGTCGGAATTTGGGGCTGCAAAGATTGTGGTAAAGTGAAAGCCGGCGGTGCCTACACTCTCAACACTGCTAGTGCTGTGACAGTGAGAAGCACTATCAGGAGGCTGAGAGAACAGACTGAAAGTTAA

Protein sequence

PDQGDPLCSTRFNRASGLIIVKENFYSRVSQIQVLHTFTKSSSGDLVSAKQQCYVCFLLKTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

Homology

[Close]

BLAST of Spg037896 vs. NCBI nr
Match: KAG6571778.1 (SNF2 domain-containing protein CLASSY 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 193.7 bits (491), Expect = 1.2e-45
Identity = 105/136 (77.21%), Postives = 109/136 (80.15%), Query Frame = 0


Query: 25   FYSRVSQIQVLHTFTKSSSGDLVSAKQQCYVCFLLKTKRTKKAGIVGKYGTRYGASLRKQ 84
            F    S +QVL TFTKSS GD+V  + +        TKRTKKAGIVGKYGTRYGASLRKQ
Sbjct: 1111 FMEGSSLVQVLPTFTKSSPGDIVVGRAE-------MTKRTKKAGIVGKYGTRYGASLRKQ 1170

Query: 85   IKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASA 144
            IKKMEVSQHSKYFCEFCGK         YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASA
Sbjct: 1171 IKKMEVSQHSKYFCEFCGK---------YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASA 1230

Query: 145  VTVRSTIRRLREQTES 161
            VTVRSTIRRLREQTES
Sbjct: 1231 VTVRSTIRRLREQTES 1230

[Close]

BLAST of Spg037896 vs. NCBI nr
Match: KAF1873427.1 (hypothetical protein Lal_00027465, partial [Lupinus albus])

HSP 1 Score: 185.3 bits (469), Expect = 4.2e-43
Identity = 100/127 (78.74%), Postives = 104/127 (81.89%), Query Frame = 0


Query: 45  DLVSAKQQCYV-----------CFLLKTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQH 104
           DLVSA   C++            FL KTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQH
Sbjct: 40  DLVSAGAICWIHVRIEMNEMMKKFLPKTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQH 99

Query: 105 SKYFCEFCGKAS-SFPYFTQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIR 160
           SK+FCEFCGK   SF    +YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIR
Sbjct: 100 SKFFCEFCGKVGLSFFVNVEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIR 159

[Close]

BLAST of Spg037896 vs. NCBI nr
Match: KDO85434.1 (hypothetical protein CISIN_1g045338mg [Citrus sinensis])

HSP 1 Score: 183.3 bits (464), Expect = 1.6e-42
Identity = 99/128 (77.34%), Postives = 103/128 (80.47%), Query Frame = 0


Query: 38  FTKSSSGDLVSAKQQC-----YVCFLLKTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQ 97
           F+ ++   L S +QQ       VCF   TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQ
Sbjct: 16  FSSATLISLYSQQQQVRFLEFLVCFCKMTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQ 75

Query: 98  HSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIR 157
           HSKYFCEFCGK         YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIR
Sbjct: 76  HSKYFCEFCGK---------YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIR 134

Query: 158 RLREQTES 161
           RLREQTES
Sbjct: 136 RLREQTES 134

[Close]

BLAST of Spg037896 vs. NCBI nr
Match: XP_006464390.2 (60S ribosomal protein L37a [Citrus sinensis])

HSP 1 Score: 183.3 bits (464), Expect = 1.6e-42
Identity = 99/128 (77.34%), Postives = 103/128 (80.47%), Query Frame = 0


Query: 38  FTKSSSGDLVSAKQQC-----YVCFLLKTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQ 97
           F+ ++   L S +QQ       VCF   TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQ
Sbjct: 35  FSSATLISLYSQQQQVRFLEFLVCFCKMTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQ 94

Query: 98  HSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIR 157
           HSKYFCEFCGK         YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIR
Sbjct: 95  HSKYFCEFCGK---------YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIR 153

Query: 158 RLREQTES 161
           RLREQTES
Sbjct: 155 RLREQTES 153

[Close]

BLAST of Spg037896 vs. NCBI nr
Match: OVA06874.1 (Ribosomal protein L37ae [Macleaya cordata])

HSP 1 Score: 182.2 bits (461), Expect = 3.6e-42
Identity = 92/99 (92.93%), Postives = 94/99 (94.95%), Query Frame = 0


Query: 61  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAV 120
           TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGKAS F +   YAVKRKAV
Sbjct: 2   TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHAKYFCEFCGKASHFSH-PYYAVKRKAV 61

Query: 121 GIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 160
           GIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
Sbjct: 62  GIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 99

[Close]

BLAST of Spg037896 vs. ExPASy Swiss-Prot
Match: Q9XHE4 (60S ribosomal protein L37a OS=Gossypium hirsutum OX=3635 GN=RPL37A PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.7e-42
Identity = 90/100 (90.00%), Postives = 90/100 (90.00%), Query Frame = 0


Query: 61  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAV 120
           TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK         YAVKRKAV
Sbjct: 2   TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK---------YAVKRKAV 61

Query: 121 GIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 161
           GIWGCK CGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 62  GIWGCKACGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of Spg037896 vs. ExPASy Swiss-Prot
Match: P0DKK1 (60S ribosomal protein L37a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0679700 PE=1 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.2e-42
Identity = 88/100 (88.00%), Postives = 91/100 (91.00%), Query Frame = 0


Query: 61  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAV 120
           TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK         +AVKRKAV
Sbjct: 2   TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK---------FAVKRKAV 61

Query: 121 GIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 161
           GIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Sbjct: 62  GIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 92

[Close]

BLAST of Spg037896 vs. ExPASy Swiss-Prot
Match: P0DKK2 (60S ribosomal protein L37a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0557000 PE=1 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.2e-42
Identity = 88/100 (88.00%), Postives = 91/100 (91.00%), Query Frame = 0


Query: 61  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAV 120
           TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK         +AVKRKAV
Sbjct: 2   TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK---------FAVKRKAV 61

Query: 121 GIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 161
           GIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Sbjct: 62  GIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 92

[Close]

BLAST of Spg037896 vs. ExPASy Swiss-Prot
Match: Q9ZRS8 (60S ribosomal protein L37a OS=Pseudotsuga menziesii OX=3357 GN=RPL37A PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.8e-41
Identity = 87/99 (87.88%), Postives = 89/99 (89.90%), Query Frame = 0


Query: 61  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAV 120
           TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+FCEFCGK         +AVKRKAV
Sbjct: 2   TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGK---------FAVKRKAV 61

Query: 121 GIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 160
           GIWGCKDCGKVKAGGAYTLNT SAVTVRSTIRRLREQTE
Sbjct: 62  GIWGCKDCGKVKAGGAYTLNTPSAVTVRSTIRRLREQTE 91

[Close]

BLAST of Spg037896 vs. ExPASy Swiss-Prot
Match: Q9SRK6 (Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL37AB PE=3 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 4.1e-41
Identity = 86/100 (86.00%), Postives = 89/100 (89.00%), Query Frame = 0


Query: 61  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAV 120
           TKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGK         Y+VKRK V
Sbjct: 2   TKRTKKARIVGKYGTRYGASLRKQIKKMEVSQHNKYFCEFCGK---------YSVKRKVV 61

Query: 121 GIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 161
           GIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTES
Sbjct: 62  GIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of Spg037896 vs. ExPASy TrEMBL
Match: A0A6A5MJL7 (Uncharacterized protein (Fragment) OS=Lupinus albus OX=3870 GN=Lal_00027465 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 2.0e-43
Identity = 100/127 (78.74%), Postives = 104/127 (81.89%), Query Frame = 0


Query: 45  DLVSAKQQCYV-----------CFLLKTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQH 104
           DLVSA   C++            FL KTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQH
Sbjct: 40  DLVSAGAICWIHVRIEMNEMMKKFLPKTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQH 99

Query: 105 SKYFCEFCGKAS-SFPYFTQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIR 160
           SK+FCEFCGK   SF    +YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIR
Sbjct: 100 SKFFCEFCGKVGLSFFVNVEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIR 159

[Close]

BLAST of Spg037896 vs. ExPASy TrEMBL
Match: A0A067H0Q3 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g045338mg PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 7.8e-43
Identity = 99/128 (77.34%), Postives = 103/128 (80.47%), Query Frame = 0


Query: 38  FTKSSSGDLVSAKQQC-----YVCFLLKTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQ 97
           F+ ++   L S +QQ       VCF   TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQ
Sbjct: 16  FSSATLISLYSQQQQVRFLEFLVCFCKMTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQ 75

Query: 98  HSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIR 157
           HSKYFCEFCGK         YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIR
Sbjct: 76  HSKYFCEFCGK---------YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIR 134

Query: 158 RLREQTES 161
           RLREQTES
Sbjct: 136 RLREQTES 134

[Close]

BLAST of Spg037896 vs. ExPASy TrEMBL
Match: A0A200Q8W6 (Ribosomal protein L37ae OS=Macleaya cordata OX=56857 GN=BVC80_497g29 PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.7e-42
Identity = 92/99 (92.93%), Postives = 94/99 (94.95%), Query Frame = 0


Query: 61  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAV 120
           TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGKAS F +   YAVKRKAV
Sbjct: 2   TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHAKYFCEFCGKASHFSH-PYYAVKRKAV 61

Query: 121 GIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 160
           GIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
Sbjct: 62  GIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 99

[Close]

BLAST of Spg037896 vs. ExPASy TrEMBL
Match: V4U3T0 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10022898mg PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.9e-42
Identity = 93/105 (88.57%), Postives = 95/105 (90.48%), Query Frame = 0


Query: 56  CFLLKTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAV 115
           C +L+TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK         YAV
Sbjct: 26  CRVLQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK---------YAV 85

Query: 116 KRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 161
           KRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 86  KRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 121

[Close]

BLAST of Spg037896 vs. ExPASy TrEMBL
Match: A0A2H5PZX9 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_182790 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.9e-42
Identity = 93/105 (88.57%), Postives = 95/105 (90.48%), Query Frame = 0


Query: 56  CFLLKTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAV 115
           C +L+TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK         YAV
Sbjct: 26  CRVLQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK---------YAV 85

Query: 116 KRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 161
           KRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 86  KRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 121

[Close]

BLAST of Spg037896 vs. TAIR 10
Match: AT3G10950.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 169.1 bits (427), Expect = 2.9e-42
Identity = 86/100 (86.00%), Postives = 89/100 (89.00%), Query Frame = 0


Query: 61  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAV 120
           TKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGK         Y+VKRK V
Sbjct: 2   TKRTKKARIVGKYGTRYGASLRKQIKKMEVSQHNKYFCEFCGK---------YSVKRKVV 61

Query: 121 GIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 161
           GIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTES
Sbjct: 62  GIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of Spg037896 vs. TAIR 10
Match: AT3G60245.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 166.4 bits (420), Expect = 1.9e-41
Identity = 84/98 (85.71%), Postives = 86/98 (87.76%), Query Frame = 0


Query: 62  KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVG 121
           KRTKK GIVGKYGTRYGAS+RKQIKKMEVSQHSKYFCEFCGK         Y VKRKAVG
Sbjct: 3   KRTKKVGIVGKYGTRYGASIRKQIKKMEVSQHSKYFCEFCGK---------YGVKRKAVG 62

Query: 122 IWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 160
           IWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQ E
Sbjct: 63  IWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQIE 91

The following BLAST results are available for this feature:

BLAST of Spg037896 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571778.1	1.2e-45	77.21	SNF2 domain-containing protein CLASSY 3, partial [Cucurbita argyrosperma subsp. ...	[more]
KAF1873427.1	4.2e-43	78.74	hypothetical protein Lal_00027465, partial [Lupinus albus]	[more]
KDO85434.1	1.6e-42	77.34	hypothetical protein CISIN_1g045338mg [Citrus sinensis]	[more]
XP_006464390.2	1.6e-42	77.34	60S ribosomal protein L37a [Citrus sinensis]	[more]
OVA06874.1	3.6e-42	92.93	Ribosomal protein L37ae [Macleaya cordata]	[more]

BLAST of Spg037896 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XHE4	1.7e-42	90.00	60S ribosomal protein L37a OS=Gossypium hirsutum OX=3635 GN=RPL37A PE=3 SV=1	[more]
P0DKK1	2.2e-42	88.00	60S ribosomal protein L37a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g06...	[more]
P0DKK2	2.2e-42	88.00	60S ribosomal protein L37a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g05...	[more]
Q9ZRS8	1.8e-41	87.88	60S ribosomal protein L37a OS=Pseudotsuga menziesii OX=3357 GN=RPL37A PE=3 SV=1	[more]
Q9SRK6	4.1e-41	86.00	Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL37AB...	[more]

BLAST of Spg037896 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A5MJL7	2.0e-43	78.74	Uncharacterized protein (Fragment) OS=Lupinus albus OX=3870 GN=Lal_00027465 PE=3...	[more]
A0A067H0Q3	7.8e-43	77.34	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g045338mg PE=3 SV=1	[more]
A0A200Q8W6	1.7e-42	92.93	Ribosomal protein L37ae OS=Macleaya cordata OX=56857 GN=BVC80_497g29 PE=3 SV=1	[more]
V4U3T0	2.9e-42	88.57	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10022898mg PE=3 ...	[more]
A0A2H5PZX9	2.9e-42	88.57	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_182790 PE=3 SV=1	[more]

BLAST of Spg037896 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10950.1	2.9e-42	86.00	Zinc-binding ribosomal protein family protein	[more]
AT3G60245.1	1.9e-41	85.71	Zinc-binding ribosomal protein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011331	Ribosomal protein L37ae/L37e	GENE3D	2.20.25.30		coord: 60..160 e-value: 4.8E-41 score: 140.8
IPR002674	Ribosomal protein L37ae	TIGRFAM	TIGR00280	TIGR00280	coord: 62..159 e-value: 3.3E-29 score: 99.0
IPR002674	Ribosomal protein L37ae	PFAM	PF01780	Ribosomal_L37ae	coord: 63..156 e-value: 4.9E-34 score: 116.3
IPR002674	Ribosomal protein L37ae	HAMAP	MF_00327	Ribosomal_L37Ae	coord: 63..140 score: 18.872284
None	No IPR available	PANTHER	PTHR48132:SF2	60S RIBOSOMAL PROTEIN L37A-2	coord: 51..160
None	No IPR available	PANTHER	PTHR48132	ZGC:171772	coord: 51..160
IPR011332	Zinc-binding ribosomal protein	SUPERFAMILY	57829	Zn-binding ribosomal proteins	coord: 69..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg037896.1	Spg037896.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0080188	gene silencing by RNA-directed DNA methylation
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0022626	cytosolic ribosome
cellular_component	GO:0005840	ribosome
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003735	structural constituent of ribosome