Spg037770 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg037770
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Cytochrome P450
Location	scaffold27: 81543 .. 81979 (+)
RNA-Seq Expression	Spg037770
Synteny	Spg037770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGACGGCAATGGTCCGCCGGCAAGCTCGTTCTGATCTTGGATGCAGTACATTGGAATCCTGAAGCACCACCACGAACGCTACCGCGCGTTCACCTGCGGTGCGGTAAGGCACCACCCAGTTGTGCCAGCAGCCAACTCCGGCGTGTCAGCTTAGTTATCCTCATCAAGCCACTTACTTAATGTCTAGCTTCCCAACAGGTAGACGGTTCCTTTTCCCCCAGATCAATGAAGAAGGGAGAAGTCAGTTGATTCTTCCGAATCACCGAAAGCGAAGCGCTATGCCGGGGCGGGGGGACGGGACAAGAAACGGCTCCGAAGAAAGCGATTTTGGTTCCCAATGTTTCTCCACGCCCAACGAGATGCGTCAACCTCGGGATGCTTTACTCCTAACCCCACAAGGTTCCGAGACGGAGCTTAACCTGAGTCTCGGTTAA

mRNA sequence

ATGGGACGGCAATGGTCCGCCGGCAAGCTCGTTCTGATCTTGGATGCAGTACATTGGAATCCTGAAGCACCACCACGAACGCTACCGCGCGTTCACCTGCGGTGCGGTAGACGGTTCCTTTTCCCCCAGATCAATGAAGAAGGGAGAAGTCAGTTGATTCTTCCGAATCACCGAAAGCGAAGCGCTATGCCGGGGCGGGGGGACGGGACAAGAAACGGCTCCGAAGAAAGCGATTTTGGTTCCCAATGTTTCTCCACGCCCAACGAGATGCGTCAACCTCGGGATGCTTTACTCCTAACCCCACAAGGTTCCGAGACGGAGCTTAACCTGAGTCTCGGTTAA

Coding sequence (CDS)

ATGGGACGGCAATGGTCCGCCGGCAAGCTCGTTCTGATCTTGGATGCAGTACATTGGAATCCTGAAGCACCACCACGAACGCTACCGCGCGTTCACCTGCGGTGCGGTAGACGGTTCCTTTTCCCCCAGATCAATGAAGAAGGGAGAAGTCAGTTGATTCTTCCGAATCACCGAAAGCGAAGCGCTATGCCGGGGCGGGGGGACGGGACAAGAAACGGCTCCGAAGAAAGCGATTTTGGTTCCCAATGTTTCTCCACGCCCAACGAGATGCGTCAACCTCGGGATGCTTTACTCCTAACCCCACAAGGTTCCGAGACGGAGCTTAACCTGAGTCTCGGTTAA

Protein sequence

MGRQWSAGKLVLILDAVHWNPEAPPRTLPRVHLRCGRRFLFPQINEEGRSQLILPNHRKRSAMPGRGDGTRNGSEESDFGSQCFSTPNEMRQPRDALLLTPQGSETELNLSLG

Homology

[Close]

BLAST of Spg037770 vs. NCBI nr
Match: TYK24171.1 (hypothetical protein E5676_scaffold75540G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 224.9 bits (572), Expect = 3.4e-55
Identity = 108/113 (95.58%), Postives = 109/113 (96.46%), Query Frame = 0


Query: 1   MGRQWSAGKLVLILDAVHWNPEAPPRTLPRVHLRCGRRFLFPQINEEGRSQLILPNHRKR 60
           MGRQWSAGKLVLILDAVHWNPEAPPRTLPRV+LRCGRRFLFPQINEEGRSQLI  NHRKR
Sbjct: 1   MGRQWSAGKLVLILDAVHWNPEAPPRTLPRVNLRCGRRFLFPQINEEGRSQLIRKNHRKR 60

Query: 61  SAMPGRGDGTRNGSEESDFGSQCFSTPNEMRQPRDALLLTPQGSETELNLSLG 114
           SAMPGRGDG RNGSEES FGSQCFSTPNEMRQPRDALLLTPQGSETELNLSLG
Sbjct: 61  SAMPGRGDGRRNGSEESYFGSQCFSTPNEMRQPRDALLLTPQGSETELNLSLG 113

[Close]

BLAST of Spg037770 vs. NCBI nr
Match: KAG6585932.1 (hypothetical protein SDJN03_18665, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 222.2 bits (565), Expect = 2.2e-54
Identity = 107/113 (94.69%), Postives = 107/113 (94.69%), Query Frame = 0


Query: 1   MGRQWSAGKLVLILDAVHWNPEAPPRTLPRVHLRCGRRFLFPQINEEGRSQLILPNHRKR 60
           MGRQWSAGKLVLILDAVHWNPEAPPR LPRVHLRCGRRFLFPQINEEGRS  ILPN RKR
Sbjct: 1   MGRQWSAGKLVLILDAVHWNPEAPPRKLPRVHLRCGRRFLFPQINEEGRSVCILPNPRKR 60

Query: 61  SAMPGRGDGTRNGSEESDFGSQCFSTPNEMRQPRDALLLTPQGSETELNLSLG 114
           SAMPGRGDGTRNGSEES FGSQCF TPNEMRQPRDALLLTPQGSETELNLSLG
Sbjct: 61  SAMPGRGDGTRNGSEESYFGSQCFFTPNEMRQPRDALLLTPQGSETELNLSLG 113

[Close]

BLAST of Spg037770 vs. NCBI nr
Match: KAA0062690.1 (hypothetical protein E6C27_scaffold47124G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 222.2 bits (565), Expect = 2.2e-54
Identity = 107/112 (95.54%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 1   MGRQWSAGKLVLILDAVHWNPEAPPRTLPRVHLRCGRRFLFPQINEEGRSQLILPNHRKR 60
           MGRQWSAGKLVLILDAVHWNPEAPPRTLPRV+LRCGRRFLFPQINEEGRSQLI  NHRKR
Sbjct: 1   MGRQWSAGKLVLILDAVHWNPEAPPRTLPRVNLRCGRRFLFPQINEEGRSQLIRKNHRKR 60

Query: 61  SAMPGRGDGTRNGSEESDFGSQCFSTPNEMRQPRDALLLTPQGSETELNLSL 113
           SAMPGRGDG RNGSEES FGSQCFSTPNEMRQPRDALLLTPQGSETELNLSL
Sbjct: 61  SAMPGRGDGRRNGSEESYFGSQCFSTPNEMRQPRDALLLTPQGSETELNLSL 112

[Close]

BLAST of Spg037770 vs. NCBI nr
Match: KAF3772033.1 (hypothetical protein EJ110_NYTH58923 [Nymphaea thermarum])

HSP 1 Score: 197.6 bits (501), Expect = 5.8e-47
Identity = 96/113 (84.96%), Postives = 105/113 (92.92%), Query Frame = 0


Query: 1   MGRQWSAGKLVLILDAVHWNPEAPPRTLPRVHLRCGRRFLFPQINEEGRSQLILPNHRKR 60
           MGRQWSAGKLVLILDAVHWNP+APPRTLPRV L   RRFLFP+IN+EGRSQLILP +RKR
Sbjct: 1   MGRQWSAGKLVLILDAVHWNPDAPPRTLPRVRL---RRFLFPRINKEGRSQLILPKNRKR 60

Query: 61  SAMPGRGDGTRNGSEESDFGSQCFSTPNEMRQPRDALLLTPQGSETELNLSLG 114
           SAMPGRGDG RN SE+ ++GSQCFSTPNE+RQPRDALLLTP+GSETELNLSLG
Sbjct: 61  SAMPGRGDGKRNCSEDQNWGSQCFSTPNEIRQPRDALLLTPKGSETELNLSLG 110

[Close]

BLAST of Spg037770 vs. NCBI nr
Match: GER45593.1 (cytochrome P450 [Striga asiatica])

HSP 1 Score: 189.1 bits (479), Expect = 2.1e-44
Identity = 94/119 (78.99%), Postives = 100/119 (84.03%), Query Frame = 0


Query: 1   MGRQWSAGKLVLILDAVHWNPEAPPRTLPRVHLRCGR------RFLFPQINEEGRSQLIL 60
           MGRQWSAGKLVLILDAVHWNPEAPPRTLPRVHLRCG+           +INEEGR + IL
Sbjct: 1   MGRQWSAGKLVLILDAVHWNPEAPPRTLPRVHLRCGKAPPSCASSQLRRINEEGRRKWIL 60

Query: 61  PNHRKRSAMPGRGDGTRNGSEESDFGSQCFSTPNEMRQPRDALLLTPQGSETELNLSLG 114
           P +RKRSAMPGRGDG R GSEE ++GSQCFST NEMR PRDALLLTPQGSETELNLSLG
Sbjct: 61  PKNRKRSAMPGRGDGKRKGSEERNWGSQCFSTLNEMRHPRDALLLTPQGSETELNLSLG 119

[Close]

BLAST of Spg037770 vs. ExPASy TrEMBL
Match: A0A5D3DKM4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75540G00010 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.6e-55
Identity = 108/113 (95.58%), Postives = 109/113 (96.46%), Query Frame = 0


Query: 1   MGRQWSAGKLVLILDAVHWNPEAPPRTLPRVHLRCGRRFLFPQINEEGRSQLILPNHRKR 60
           MGRQWSAGKLVLILDAVHWNPEAPPRTLPRV+LRCGRRFLFPQINEEGRSQLI  NHRKR
Sbjct: 1   MGRQWSAGKLVLILDAVHWNPEAPPRTLPRVNLRCGRRFLFPQINEEGRSQLIRKNHRKR 60

Query: 61  SAMPGRGDGTRNGSEESDFGSQCFSTPNEMRQPRDALLLTPQGSETELNLSLG 114
           SAMPGRGDG RNGSEES FGSQCFSTPNEMRQPRDALLLTPQGSETELNLSLG
Sbjct: 61  SAMPGRGDGRRNGSEESYFGSQCFSTPNEMRQPRDALLLTPQGSETELNLSLG 113

[Close]

BLAST of Spg037770 vs. ExPASy TrEMBL
Match: A0A5A7V623 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold47124G00010 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.1e-54
Identity = 107/112 (95.54%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 1   MGRQWSAGKLVLILDAVHWNPEAPPRTLPRVHLRCGRRFLFPQINEEGRSQLILPNHRKR 60
           MGRQWSAGKLVLILDAVHWNPEAPPRTLPRV+LRCGRRFLFPQINEEGRSQLI  NHRKR
Sbjct: 1   MGRQWSAGKLVLILDAVHWNPEAPPRTLPRVNLRCGRRFLFPQINEEGRSQLIRKNHRKR 60

Query: 61  SAMPGRGDGTRNGSEESDFGSQCFSTPNEMRQPRDALLLTPQGSETELNLSL 113
           SAMPGRGDG RNGSEES FGSQCFSTPNEMRQPRDALLLTPQGSETELNLSL
Sbjct: 61  SAMPGRGDGRRNGSEESYFGSQCFSTPNEMRQPRDALLLTPQGSETELNLSL 112

[Close]

BLAST of Spg037770 vs. ExPASy TrEMBL
Match: A0A5A7QJT0 (Cytochrome P450 OS=Striga asiatica OX=4170 GN=STAS_22566 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.0e-44
Identity = 94/119 (78.99%), Postives = 100/119 (84.03%), Query Frame = 0


Query: 1   MGRQWSAGKLVLILDAVHWNPEAPPRTLPRVHLRCGR------RFLFPQINEEGRSQLIL 60
           MGRQWSAGKLVLILDAVHWNPEAPPRTLPRVHLRCG+           +INEEGR + IL
Sbjct: 1   MGRQWSAGKLVLILDAVHWNPEAPPRTLPRVHLRCGKAPPSCASSQLRRINEEGRRKWIL 60

Query: 61  PNHRKRSAMPGRGDGTRNGSEESDFGSQCFSTPNEMRQPRDALLLTPQGSETELNLSLG 114
           P +RKRSAMPGRGDG R GSEE ++GSQCFST NEMR PRDALLLTPQGSETELNLSLG
Sbjct: 61  PKNRKRSAMPGRGDGKRKGSEERNWGSQCFSTLNEMRHPRDALLLTPQGSETELNLSLG 119

[Close]

BLAST of Spg037770 vs. ExPASy TrEMBL
Match: A0A2J6KH98 (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_7X25881 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.5e-43
Identity = 93/113 (82.30%), Postives = 95/113 (84.07%), Query Frame = 0


Query: 1   MGRQWSAGKLVLILDAVHWNPEAPPRTLPRVHLRCGRRFLFPQINEEGRSQLILPNHRKR 60
           MGRQWSAGKLVLILDAVHWNPEAPPRTLPRV LRC           EGRS LILP +RKR
Sbjct: 1   MGRQWSAGKLVLILDAVHWNPEAPPRTLPRVRLRC-----------EGRSHLILPKNRKR 60

Query: 61  SAMPGRGDGTRNGSEESDFGSQCFSTPNEMRQPRDALLLTPQGSETELNLSLG 114
           SAMPGRGDG RNGSEE + GSQCFST NEMRQPRDALLLTPQGSETELNLSLG
Sbjct: 61  SAMPGRGDGKRNGSEERNLGSQCFSTLNEMRQPRDALLLTPQGSETELNLSLG 102

[Close]

BLAST of Spg037770 vs. ExPASy TrEMBL
Match: A0A2J6KVD5 (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_5X16081 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.0e-41
Identity = 95/145 (65.52%), Postives = 98/145 (67.59%), Query Frame = 0


Query: 1   MGRQWSAGKLVLILDAVHWNPEAPPRTLPRVHLRCGRR---------------------- 60
           MGRQWS GKL LILDAVHWNPEAPPRTL  V LRCG+                       
Sbjct: 1   MGRQWSTGKLFLILDAVHWNPEAPPRTLSCVRLRCGKAPPCCASSQLRCVSLVILIKPLT 60

Query: 61  ----------FLFPQINEEGRSQLILPNHRKRSAMPGRGDGTRNGSEESDFGSQCFSTPN 114
                        PQINEEGRS LILP +RKRSAMPGRGDG RNGSEE + GSQCFST N
Sbjct: 61  WCLVSQLVDGSFSPQINEEGRSHLILPKNRKRSAMPGRGDGKRNGSEERNLGSQCFSTLN 120

The following BLAST results are available for this feature:

BLAST of Spg037770 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK24171.1	3.4e-55	95.58	hypothetical protein E5676_scaffold75540G00010 [Cucumis melo var. makuwa]	[more]
KAG6585932.1	2.2e-54	94.69	hypothetical protein SDJN03_18665, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0062690.1	2.2e-54	95.54	hypothetical protein E6C27_scaffold47124G00010 [Cucumis melo var. makuwa]	[more]
KAF3772033.1	5.8e-47	84.96	hypothetical protein EJ110_NYTH58923 [Nymphaea thermarum]	[more]
GER45593.1	2.1e-44	78.99	cytochrome P450 [Striga asiatica]	[more]

BLAST of Spg037770 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg037770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DKM4	1.6e-55	95.58	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7V623	1.1e-54	95.54	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7QJT0	1.0e-44	78.99	Cytochrome P450 OS=Striga asiatica OX=4170 GN=STAS_22566 PE=4 SV=1	[more]
A0A2J6KH98	2.5e-43	82.30	Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_7X25881 PE=4 SV=1	[more]
A0A2J6KVD5	1.0e-41	65.52	Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_5X16081 PE=4 SV=1	[more]

BLAST of Spg037770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg037770.1	Spg037770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003964	RNA-directed DNA polymerase activity