Spg037761 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg037761
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	DNA-directed RNA polymerase subunit beta''
Location	scaffold27: 106348 .. 116546 (-)
RNA-Seq Expression	Spg037761
Synteny	Spg037761

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGAATCTCTATCAGACGATTCTCTTTCTGTTCCTATATCTTTGATTTTTTCCATCTATAACGTTTTTGTTTTGGAATTCTTCCTATTAACTCATCATGATATCCTTCTCTCTAGAGCGACTGGCAAGTCATTCTCCTCTTCGAAGAAAGGGAAGCTAGTATTGAAAGAGGAACTAATACAGCCACGGTAGTCGAGTAGCACCTTTGGACGTCAAATCCTTATTTGACTCAGCAACTCCACAGCTATACTTGACTGACGTCGGCTCCATACCCTAAGTAAGTAGAGTGAAATTCTCTTTACAGAAAATCTAACTCTACTTAGGGGTGGTGAGACAGAGGGAGAGGCTGCCCTATACTAGGGGTAATCCCCATATTTCCTAGGTAGGACAATGGGGGTTATTATAAATAGTATATAATCGTATCCTTAGTATAGTTTCATACTGAGTCTATACGTGTTCCTAAGCAAACTCCCATTGGCTGGCGAGTGATTTTTATACCATTTAGTTTAGCTCGCTTGGCCTCCAAAAAAAGGGAACTGGAAACAAATCTTATCCTTTGACTTAGGACTGCAACTAGCCTGCCTATTCTCTCCTAGGGATAATTGTCTACCTCATAGGAAAAGTCTTCGTGGGTAAATCAAAAAGTTTGCCTATTTGACTAATAGTGCTTCTTTCTAACTAGCCTGTAACCACATGAAAGGAAACTAACAGGCTTTCCGGTATCACCATCGAAAGACTAGCAACCTGACAGTCCTAAGCAACCTGGAACCAACAACGTTACATATACCATACTGCTATAGAAGACATGAATACCAGTTAGACTACGGGACGCGTACACCCGAAATTGGTGAGCAACTTACTGCCCTTTAAGTCAAGAGCTAGTAGTACTATCAGCATCAGCAAAGGATATCGTAATTATGGTGAATACGTTTTTCTTGCTGCAGCCGTTTTCTTGGTGGGTAGTCGAATGAAGGTCTTAGAGATGGAACCGAAGCTTCTATAGTAGCAGGAGCTACAAGTAATGAAATAGCATCTGCCAATTCATTAATCACTAAACAGGAGATGGTTCTTTTCCTGTCTAATTAAACTGTCGACTTTGTAAATGCTTCAGTAGAAGACTCCCTTCACCGGGGAACCTCTCTTCCATTTTAGGCCGGAGGCAAAGAAGGAAGCCATTGTTAAGGTAACCAGAGAGGGGCGTAGGACTAGAGGGTGTCACCACTTCCCGTCCTAGAATCACGGGACATTCAGACTAGGAGGTCGCTCGTCCCCGCTCTCATAATCAGAATAAGCGGAGCCGTCTTGTCTTCAAGCGAGAACTCTGAAGTTCTTGATCACTGAATGCGATTAAGAGACAAAAGCATTTGCTTGCTTGAAGGTTCACTTACGAGATTCGATCTTTCTTGTTTGTAGTTAGTTATCTTTCTATTCTTTCCTCTCGTATAGCCGAGTGAAGTGCTTTTCATACTATGATTTGTCAACAGTGGAATTAGCGTATTATAGTAGTTGCAGTGATAAAAGAAGAAAGGTATGGAGTAGTAGCAGTCAATTCTATCTTTCTAGTAGCTCTTTGTTCAACTCTTATTTAGTGTAAAAACGATTTACATTATTGTTCTTATAAATAGTAACAGTTCTTTTCAACTCTCTTCCTCAATCCCTTCCATCTTCTGTAGGAGATGAGGTAATAACTTCAAATTCTCTGACTGGAAATTCTGCCTTTCCATCACCTCATAAGCTAATTCCGAGACTGAGACTAGAGTTGCAAATTAGACTCTTGAAGTTCCATTCGAACCCTCAACAGCAAGACCATACAGATGGCATCGAGAATCCCCTACCGAAGTGACTGAACCACCCCTTCTTGATCCGTTCTTTCCAGCGGAGGGAAGACTGACTTGATTTGATGTTTTAATCCTGAGCGTGATGCTATTTGATCGGTGATTATAGGAAGCCGCTAGGCGCGAATGCTTTCTTTCTATGAAATCCTGTTGCTATGGCTCACGAAGAGCAACGGGACAGTCACAGGCTGGCTTAAGAATCACTAACCTCCGACTCCCTAAACTTGGTGGGTGTGCCTGCTTCTTCCGACCTCTATCCAAACAAATCATCGAGGAAGTCAGGTAGGTAGGTTCCGGGTAGCACTTCAATGCGAAGCGCACCCTTCACCCACTGGCACGAGCCAAACTAGCTAAGCGCGAGGAAAGCTTCACCGCCCTCTTCCAGCTCGAGCTCACAGACCTCTCTGAGTCAATTCCAAATGGAACTCCAATCTTTCCCCTTTACGAATGATTCAGTGCTCTCTTCAACCGGCGAGTTTAGCCTTGTCAGTGCTCTCAGAAACCAGATCAATTAGGTCTGGATCGGCTCACTGAACACTTTCCCAATCGAAATGAATTCGAAAGGCGAGACACGACACTCACAACACGAGACTCGAATCGAGAATCAACCCCCTGGGTTACAGAGGGCGTTAGCTCAATTCATAGCCTTCCTTTCTTTACGAGATCAGGTCAAAAGAAAGAGTAGCACTAGCTGAGAAGAGTAAGCTTGCACATTGAGAGGCTTCCCCAATCAACATAGAGAAGGACAGTCGATAGAAGCAATCATCCGAAGAACCTTCCTTCACTATTGGTGCCCCATATTCTAATTAATAGCTATATGCTTTTCACAGGCAAGTAGTTCATGAAGAACCTGAGTTTTGGACCTTTTCAAGATAATTTTGAGTAGCACTACCTGTGAAGAGTCAGATTCCTAAGCAGTGGGAATAGCTTTTTCAAAGCTTTCGTGTGGTGGCTTTTGTCCCTAATGAGATGGGAGAGCAGCAAGCCAAACATAGTACTCCTCGGAGGGACCGTGTCATGTCAAATTCATAGCTAAGTTGTTGACCATCTATCTGTCCTAAAAGCAAGAGCTTGGAAAACGGGTGCCAGCAGTTCGGTTGAAACTCGGAATTAGGCCGCTAAGGGCACCCGGCCCATTCTCTTGTTTGCATATCCAAGAGGCTTAACGCTCTTGCTTTCGTTCTCTCTTTGATTCCTTCTTGCTAGAAGTGCTAGTGGGATTGCAGATATTGGTTGGGGAGGACTGGATACTCTCCCTACAATACAAGTCTGGAGTCTTGCACTTGCTCGTAAACTCAAAGGAAAATCTAAAATGATTGAAAATGGATAGTTTGTTCAATCTTAGTAAAAACTGTTATAATGAGTAGTGTAAGGCTAAGTGAAATAAGATATGCAAAGGCAATCCATCCTGTAAACCAGTTCAATTCAGTTCTTTTTTCATAGTGGTAGTTTGTTTGCCCTTCCCGACAGAGATCCTGTGTCCGTTGATGAATAATCAATCCATTCAGCCGAGAAGACGGACTTGCTGGTATCGTCAAATAGAGTATCAAAGGCTTATTCCGCTCTATTGGCAGGTTTCTCTTTTCATGAAGTAGCCCCTCATTCACAGATTACGGAGCTACCCAGCTTCTCTTAATGCCAAGTAGTAGAAAAGCCGCTTTCCCGAGCTCGCTTTATCGAGTTAACGAGGTAACAGAGCGGAACCTTGGGCAAAGACATACCCGGCATACTCAAATATGCAATTCTAGGAAATGGAAGGAATAGAGAGTGAATGGAGTTAATCTATAAGTCAATAAGGTACCGATGCACTCGTCTCGGGTTCACTTTTGTAGATCTTTTTTACCTGAGAAAGTCCCATGCTTAAACTTCCATTTAGATTTTTCTATCTCTAGAAGAAGGCAGGTATTAATACGACTAGTCCGAGAGTTAGCAAGGCAGGCCGGTGCCCCATAAAGCAGCATTTCCTGATACGCATACAGTGGTTGGTCCGGAAAGAGTGGTATATAGAAACTTTTCATCAAAGCGCGAATCTCTTCCGCCTGCTAACTCATTAAAGTGAACAAAGTCAACCGATACCTTAGCCTTGGGGGATTCCCCTGGGTACTTTAGCTAGCTATTCCTCGCATCGTTAATAGTTCTTCGCTAAACAAGAGACTAATGGAATCGCATCTGAGTCAACCTCTCTGAGGGAAGTCAAGGAGCCAATAGCCCTTCCTTCCTTTCTCTACTATTCGTGCACCTTAGGCTACAGAATTTACCTTTCGGCCTGGTCCTTTTCTTTAAGGTAAAGGGAAGGCAAGTCTCATTTGGTACTTTCTTCACGGCAAATAGAATAGGAGTTTTCCCGGCTGCTGCTAGAGAATAGGCAGTTGTTCACGACTCAGCTGCTAGCCTTTCGAAATCTCTTTGTCGAGATCACGAATCAGCAGCTATAGAAGGAGTTGTTCCAGAACCCGCAGGCAGAATAACCTTTGTTGTAAGAAGGGCTACTGGTATGACATCAATCACTCTTAGAGTCTTAGCTGGGAACTAAAGTCAAGCTTTCCCGTGTCGAGAAGGAGAGTTGCTAGTTTTTCTTTTTCTTTTTGACAGTTAAGTTAGCTCGAAAGGTATTTATCTTCCTCAGATACTTGACCTCGAAGGCAGGGATAGGGCTTTGGATACGAGACCTACAGGGATAGGGTTTTGCCATAAACCGGAGTTTATGAGTGAAGGCTACTTAGAACTGGCGAGAAGGTTGGCACAAAAGTTTTCAATCCTATGTACGGGTCAATCTAATCTCACATATCCTGCTATTTTCCACGGTAATTCTGATTTATTGGCAAAGAGGCGAAGAAATGGATTCATCATTCAATTTGAATCACTTCAAGAACGAGAAAAAGAACTACCACCCCCTTCCAGTATTTCGATTGAAATACCCATAAATGGTCTTTTTCGTAGAAGTAGAAAGAGTATTCTTGCTTATTTCGATGATCCTCAATACAGAAGAAAGAGTTCGGGAATTACTAAATATGGGACTATAGGGGTCCTAAAAAAAGAGGATTTGATTGAGTATCGAGGCGTCAAAGACTTTAAGCCAAAATACCAAATGCAAATGAAAGTGGATCGATTTTTTTTCATTCCCGAGGAAGTGCATATTTTACCTGAATCTTCTTCCATAATGGTACGGAACAACAGTATCATTGGAGTAGCTACACGACTAACTTTAAGTATAAGAAGCCGAGTAGGCGGATTGGTCCGAGTGGAGAAAAAAAAAAAAAGGATTGAACTCAAAATATTTTCTGGAGATATACATTTTCCTGGAGAGATGGATAAGATATCCCGACACAATGGCATCTTGATACCACCTGAAAGAGTAAAAAAAAATTCTAAGAAATCCAAAAAATGGAAAAATTGGATTTATGTCCAGTGGATCACACCTACCAAGAAAAAGTATTTTGTTTTTGTTCGACCTGTAATCATATATGAACTAGCCGACGGTATAAATTTAGTAACACTTTTCCCACAGGATCTATTGCAAGAAAGGGATAATCTGGAGCTTAGAGTTGTCAATTATATCCTTTATGGAAATGGCAAACCAATTCGGGGAATTTCTGGCACAAGCATTCAATTAGTTCGGACTTGTTTATTGTTGAATTGGGACCGAGACAAAAAAAGCTCTTCGATCGAAGAAGCCCGCGCTTCCTTTGTTGAAGTAAGTACAAATGGTCTGGTTCGAAATTTCCTCCGAATAGACTTAGTGAAATCCGATACTTCTTATATCAGAAAAAGGAAAGATCCGTCAGGTTCAGGATTGATCTTTAATAATGAGTCAGATCGCACCAATATCAATCCATTTTATTCTATTTATTCCAAGACAAGGGTTCCACAATCCCTTAGTCAAAATCAAGGAACTATTCGTACGTTGTTGAATAGAAATAAAGAACGCCAATCTTTGAGAATTTTGTCAGCATCGAATTGTTTGCAAATGGATCTATTCAACGATGTAAAAGATTATAATGTCATAAAAGAGTCAAGTAAAAAGGATCCTCTTGAAATTAGGAATTTGTTAGGCCCTTTAGGGGCGGCCCCTCAAATTGTGAATTTTTATTCATTTTCTCAGTTAATAACTCATAATCCGATCTCCCTAACTAAATATTTGCAACTTGACAATTTTAAACAGACTTTTCAAGTACTTAAATATTATTTAATGGATGAAAACGGGGGAATTTTGAATTCCGATCCATGCAGTAACATCGTTTTCAATACATTTAATTTGAATTGGCATTTTCTGCATCATAATTATCACAATAGTTATTGTGAAGAAACACCTACAAGAATTAGCCTTGGACTGTTTTTTTTTGAAAATGTATGTATAGCCAAAAATAGACCACACCTAAAATCGGGTCAAATTATAATTGTTCAAGTTGATTCTGTAGTAATAAGATCAGCTAAGCCTTATTTGGCCACTTCAGGAGCAACTGTTCATCGCCATTATGGAAAAATCCTTTACGAAGGAGATACCTTAGTTACATTTATATATGAAAAATCACGATCTGGTGATATAACGCAGGGTCTTCCAAAAGTGGAACAAGTATTAGAAGTGCGTTCGATTGATTCAATATCGATGAGCCTAGAAAAGAGAATTGAGGGTTGGAACGAGCGTATAACAAGAATTCTTGGAATTCCTTGGGGATTTTTGATTGGTGCTGAACTAACTATAGTGCAAAGTCGTATCTCTTTGGTTAATAAGATCCAAAAGGTTTCTCGATCCCAGGGGGTGGAGATCCATAATAGACATATATAAATTCTTGTACGTCAAATAACATCAAAAGTGTTGGTTTCAGAAGATGGAATGTCTAATGTTTTTTCACCTGGAGAACTAATTGGATTGTTGCGAGCGGAACGAACAGGGCGTGCTTTGGAAGAAGCGATCTGTTACCGAGCCGTATTATTGGGAATAACGAAAGCATCTCTAAATACTCAAAGTTTCATATCGGAAGCAAGTTTTCAAGAAACTGCTCGAGTTTTAGCAAAAGCCGCCCTCCGAGGTCGTATCGATTGGTTGAGAGGTCTGAAAGAGAACGTTGTTCTAGGAGGAATGATACCCGTTGGTACCGGATTCAGAGAATTAGCGCACCGTTCGAGGCAACATAACAATATTCCTTTAGAAACCCCCAAAAAAAAATTTTTCGAGGGGGAAATGAGAGATATTTTGTTCCACCACAAAGAATTATTTGATTTTTGCATTTCAACGAATTTACATGATACATCAGAACAAGCATTTCTAGGATTTAATGATTCATAAAAGTGGAGTCATCCTGTTAACTATCCGCGTTGATTTGGTAATAATAAAGATAATAACGAATAGAAAAAAATTAATGGCTTGGATCGTGTATCAACAGTCAATCCCCGGTCGAGGTAGAGGATAAGGTTCCATCGGAACAATTATTTATTTCTATTTCAGCTCGTCTCTTTTTTTTTCTTAAAAAAAGTGAGTAAGTGGGGGGAGAAATGACAAGAAGATATTGGAACATCCATTTGGAAGAGATGATGGAAGCAGGAGTTCATTTTGGTCATGGTACTAGGAAATGGAATCCTAGAATGGCACCTTATATCTCTGCAAAACGTAAAGGTATTAATATTATAAATCTTACTAGAACTGCTCGTTTTTTATCAGAAGCTTGTGATTTAGTTTTTGATGCAGCAAGTAGGGGAAAACAATTCTTAATTGTTGGTACCAAAAATAAAGCAGCGGATTCAGTAGCCCGGGCTGCAACAAGGGCTCGGTGTCATTATGTTAATAAAAAATGGCTCGGGGGTATGTTAACAAATTGGTCTACTACAGAAACGAGACTTCATAAGTTCAGGGACTTAAGAACGGAACAAAAGACGGGGGGACTCAACCGTCTTCCGAAAAGAGATGCCGCTATGTTGAAGAGACAATTATCTCACTTGCAAACATATCTGGGCGGGATTCAATATATGACAGGGTTACCCGATATTGTAATAATCGTCGATCAGCAAGAAGAATATCGGGCTCTTCAAGAATGTATCACGTTGGGAATTCCAACTATTTGTTTAATTGATACAAATTGTGACCCGGATCTCGCAGATATTTCGATTCCAGCGAATGATGATGCTATAGCTTCAATCCGATAAATTCTTAACAAATTAGTATTTGCAATTTGTGAGGGTCGTTCTAGCTCTATACGAAATTCTTGATTAATAATAAGAGAAATCCATTTTTGAGGGAACTCCATAGATTTAGGGAATTGGTTACTATTCCCGAATCACACAAAAGAGATAAAAAAAACTAGGGATATTGTAATGTAATAAGTTGGTATCAAAAATAGACAACTCAAGGCAAGTCGAAAAAAAGACAGTCGAATCAAAATAATTTCTTTTACAGTTCTATTTCTTTCAGAGGGCAATATGAATATTCTATTATGTTCTATCAACACACAAAAAGGGTTATACTATATATCTGGTGTGGAAGTCGGCCAACATTTGTATTGGCAAATAGGAGGTTTCCAAGTACATGCCCAAGTACTTATTACTTCTTGGGTTGTAATTGCTATCTTATTAGGTTCAGCCATTATAGCTGTTCGTAATCCACAAACCGTTCCTACTGACGGTCAGAATTTCTTCGAATATGTCCTTGAATTCATTCGAGACGTGAGCAAAACTCAGATTGGCGAAGAATATGGTCCATGGGTTCCCTTTATTGGAACTATGTTTCTATTTATTTTTGTTTCGAATTGGTCAGGGGCTCTTTTACCTTGGAAACTCATACAGTTACCTCACGGAGAGTTAGCCGCACCCACAAATGATATAAATACTACTGTTGCTTTAGCTTTACTCACATCAGTAGCATATTTCTATGCGGGTCTTAGCAAAAAAGGATTAAGTTATTTCGGTAAATACATTCAACCAACTCCAATCCTTTTACCCATTAACATCTTAGAAGATTTCACAAAACCCTTATCACTTAGTTTTCGACTTTTCGGAAATATATTAGCTGATGAATTAGTAGTTGTTGTTCTTGTTTCTTTAGTACCTTTAGTAGTTCCTATACCTTTTATGTTCCTTGGATTATTTACAAGTGGTATTCAAGCTCTTATTTTTGCAACTTTAGCTGCGGCTTATATAGGCGAATCCATGGAGGGTCATCATTGATTAGTTTTCGAAATAGTCTTTTTTTTTGAGCTTAGACCAAGGCAATGTATACATGGCTCAAGATAATCCACTTAGGGAACATAAATATACAAATAATCTAAAAATAAGGAAGGTATATACTATCTAGGGAGTAAGAGTAATAGGAAAAAAAAGATTACGCTATTAGGGAATTGTAAAAAAAGGAAAGAGATCTAAAAGATCTTTTTCCTCTCAACGATTGAACAAAAGAAAAAAAAATAATAAATTACATGAACTTAGATTAATCAAATATTGATATTTCTATGCAAGGATTCGGACTAATGAATTTGTCCATTTAGATTGATTGTCTCCATGTGGGATAATTCTAAAAAGAAAGGGTTTACAAAAAACGAGAAAAAAGGATTGGTTAGGGTAGAGTGGAGTCAACTAGATGTATTGAATCGAATTGCTATAAGACAACCCTTGTGGATGTTTCGAAGAATGATTCTCGAATTCGATGGAATCCAAGATATTAATAATTGGTTTACGTTAGGGAAGAAACACATGTATATGTTATATTAGATATTAACTAGTTATATAGGAACTAAAGACTAAAGATATATCTAATCCGCCCTACTATTGTGAATTTAGATAGGGCTTACAATGGAAGTCCTTCTGTTTCGTCTGTAATGTAATTTTGAATTGAATTTTGAATGAATAGAGAGATTAAATCAACAAAAAGAATGAAGAATTCAAAGAATGCTTTAGAAAAAATAAAGAAATGGAAGAACAAAAGTCGTATGGATTCACAAAAACTACGTGGCGTGGATGGATAGGAACTAAAAAAGAGAGATTGAAGTAGTTCTGACGATTCAATAATATTATTACTTCAATTCGTAGTTTTTAGTTGGATAAATCTTAGCGATGGAATAATAAGTTATAATTCATTGGTTGATTTTATCATTAACCATTTCTTTCTTTTGGTGTGAGGAACTTATCATGAATCCACGGATTTCTGCCGCTTCCGTTATTGCTGCTGGGTTGGCCGTTGGGCTTGCTTCTATTGGACCTGGGGTTGGTCAAGGTACTGCTGCGGGCCAAGCTGTAGAAGGGATCGCGAGACAACCCGAGGCGGAGGGAAAAATCCGAGGTACTTTATTGCTTAGTTTGGCTTTTATGGAAGCTTTAACAATTTATGGACTGGTTGTAGCATTAGCACTTTTATTTGCGAATCCTTTTGTTTAA

mRNA sequence

ATGAATGAATCTCTATCAGACGATTCTCTTTCTTCGAATGAAGGTCTTAGAGATGGAACCGAAGCTTCTATAGTAGCAGGAGCTACAAGTAATGAAATAGCATCTGCCAATTCATTAATCACTAAACAGGAGATGGTTCTTTTCCTCCGAGTGAAGTGCTTTTCATACTATGATTTGTCAACAGTGGAATTAGCGTATTATAGTAGTTGCAGTGATAAAAGAAGAAAGGAAGCCGCTAGGCGCGAATGCTTTCTTTCTATGAAATCCTGTTGCTATGGCTCACGAAGAGCAACGGGACAGTCACAGGCTGGCTTAAGAATCACTAACCTCCGACTCCCTAAACTTGGTGGGTGTGCCTGCTTCTTCCGACCTCTATCCAAACAAATCATCGAGGAAGTCAGGTCAAAAGAAAGAGTAGCACTAGCTGAGAAGACCGAGAAGACGGACTTGCTGGTATCGTCAAATAGAGTATCAAAGGCTTATTCCGCTCTATTGGCAGTTGTTCACGACTCAGCTGCTAGCCTTTCGAAATCTCTTTGTCGAGATCACGAATCAGCAGCTATAGAAGGAGTTGTTCCAGAACCCGCAGGCAGAATAACCTTTGTTATACTTGACCTCGAAGGCAGGGATAGGGCTTTGGATACGAGACCTACAGGGATAGGGTTTTGCCATAAACCGGAGTTTATGAGTGAAGGCTACTTAGAACTGGCGAGAAGGTTGGCACAAAAGTTTTCAATCCTATGTACGGGTCAATCTAATCTCACATATCCTGCTATTTTCCACGGTAATTCTGATTTATTGGCAAAGAGGCGAAGAAATGGATTCATCATTCAATTTGAATCACTTCAAGAACGAGAAAAAGAACTACCACCCCCTTCCAGTATTTCGATTGAAATACCCATAAATGGTCTTTTTCGTAGAAGTAGAAAGAGTATTCTTGCTTATTTCGATGATCCTCAATACAGAAGAAAGAGTTCGGGAATTACTAAATATGGGACTATAGGGGTCCTAAAAAAAGAGGATTTGATTGAGTATCGAGGCGTCAAAGACTTTAAGCCAAAATACCAAATGCAAATGAAAGTGGATCGATTTTTTTTCATTCCCGAGGAAGTGCATATTTTACCTGAATCTTCTTCCATAATGGTACGGAACAACAGTATCATTGGAGTAGCTACACGACTAACTTTAAGTATAAGAAGCCGAGTAGGCGGATTGGTCCGAGTGGAGAAAAAAAAAAAAAGGATTGAACTCAAAATATTTTCTGGAGATATACATTTTCCTGGAGAGATGGATAAGATATCCCGACACAATGGCATCTTGATACCACCTGAAAGAGTAAAAAAAAATTCTAAGAAATCCAAAAAATGGAAAAATTGGATTTATGTCCAGTGGATCACACCTACCAAGAAAAAGTATTTTGTTTTTGTTCGACCTGTAATCATATATGAACTAGCCGACGGTATAAATTTAGTAACACTTTTCCCACAGGATCTATTGCAAGAAAGGGATAATCTGGAGCTTAGAGTTGTCAATTATATCCTTTATGGAAATGGCAAACCAATTCGGGGAATTTCTGGCACAAGCATTCAATTAGTTCGGACTTGTTTATTGTTGAATTGGGACCGAGACAAAAAAAGCTCTTCGATCGAAGAAGCCCGCGCTTCCTTTGTTGAAGTAAGTACAAATGGTCTGGTTCGAAATTTCCTCCGAATAGACTTAGTGAAATCCGATACTTCTTATATCAGAAAAAGGAAAGATCCGTCAGGAGCAACTGTTCATCGCCATTATGGAAAAATCCTTTACGAAGGAGATACCTTAGTTACATTTATATATGAAAAATCACGATCTGGTGATATAACGCAGGGTCTTCCAAAAGTGGAACAAGTATTAGAAGTGCGTTCGATTGATTCAATATCGATGAGCCTAGAAAAGAGAATTGAGGGTTGGAACGAGCGTATAACAAGAATTCTTGGAATTCCTTGGGGATTTTTGATTGGTGCTGAACTAACTATAGTGCAAAGTCAAGATGGAATGTCTAATGTTTTTTCACCTGGAGAACTAATTGGATTGTTGCGAGCGGAACGAACAGGGCGTGCTTTGGAAGAAGCGATCTGTTACCGAGCCGTATTATTGGGAATAACGAAAGCATCTCTAAATACTCAAAGTTTCATATCGGAAGCAAGTTTTCAAGAAACTGCTCGAGTTTTAGCAAAAGCCGCCCTCCGAGGTCGTATCGATTGGTTGAGAGAGATGATGGAAGCAGGAGTTCATTTTGGTCATGGTACTAGGAAATGGAATCCTAGAATGGCACCTTATATCTCTGCAAAACGTAAAGGTATTAATATTATAAATCTTACTAGAACTGCTCGTTTTTTATCAGAAGCTTGTGATTTAGTTTTTGATGCAGCAAGTAGGGGAAAACAATTCTTAATTGTTGGTACCAAAAATAAAGCAGCGGATTCAGTAGCCCGGGCTGCAACAAGGGCTCGGTGTCATTATGTTAATAAAAAATGGCTCGGGGGTATGTTAACAAATTGGTCTACTACAGAAACGAGACTTCATAAGTTCAGGGACTTAAGAACGGAACAAAAGACGGGGGGACTCAACCGTCTTCCGAAAAGAGATGCCGCTATGTTGAAGAGACAATTATCTCACTTGCAAACATATCTGGGCGGGATTCAATATATGACAGGGTTACCCGATATTGTAATAATCGTCGATCAGCAAGAAGAATATCGGGCTCTTCAAGAATGTTCAGCCATTATAGCTGTTCGTAATCCACAAACCGTTCCTACTGACGGTCAGAATTTCTTCGAATATGTCCTTGAATTCATTCGAGACGTGAGCAAAACTCAGATTGGCGAAGAATATGGTCCATGGGTTCCCTTTATTGGAACTATGTTTCTATTTATTTTTGTTTCGAATTGGTCAGGGGCTCTTTTACCTTGGAAACTCATACAGTTACCTCACGGAGAGTTAGCCGCACCCACAAATGATATAAATACTACTGTTGCTTTAGCTTTACTCACATCAGTAGCATATTTCTATGCGGGTCTTAGCAAAAAAGGATTAAGTTATTTCGGTAAATACATTCAACCAACTCCAATCCTTTTACCCATTAACATCTTAGAAGATTTCACAAAACCCTTATCACTTAGTTTTCGACTTTTCGGAAATATATTAGCTGATGAATTAGTAGTTGTTGTTCTTGAACTTATCATGAATCCACGGATTTCTGCCGCTTCCGTTATTGCTGCTGGGTTGGCCGTTGGGCTTGCTTCTATTGGACCTGGGGTTGGTCAAGGTACTGCTGCGGGCCAAGCTGTAGAAGGGATCGCGAGACAACCCGAGGCGGAGGGAAAAATCCGAGGTACTTTATTGCTTAGTTTGGCTTTTATGGAAGCTTTAACAATTTATGGACTGGTTGTAGCATTAGCACTTTTATTTGCGAATCCTTTTGTTTAA

Coding sequence (CDS)

ATGAATGAATCTCTATCAGACGATTCTCTTTCTTCGAATGAAGGTCTTAGAGATGGAACCGAAGCTTCTATAGTAGCAGGAGCTACAAGTAATGAAATAGCATCTGCCAATTCATTAATCACTAAACAGGAGATGGTTCTTTTCCTCCGAGTGAAGTGCTTTTCATACTATGATTTGTCAACAGTGGAATTAGCGTATTATAGTAGTTGCAGTGATAAAAGAAGAAAGGAAGCCGCTAGGCGCGAATGCTTTCTTTCTATGAAATCCTGTTGCTATGGCTCACGAAGAGCAACGGGACAGTCACAGGCTGGCTTAAGAATCACTAACCTCCGACTCCCTAAACTTGGTGGGTGTGCCTGCTTCTTCCGACCTCTATCCAAACAAATCATCGAGGAAGTCAGGTCAAAAGAAAGAGTAGCACTAGCTGAGAAGACCGAGAAGACGGACTTGCTGGTATCGTCAAATAGAGTATCAAAGGCTTATTCCGCTCTATTGGCAGTTGTTCACGACTCAGCTGCTAGCCTTTCGAAATCTCTTTGTCGAGATCACGAATCAGCAGCTATAGAAGGAGTTGTTCCAGAACCCGCAGGCAGAATAACCTTTGTTATACTTGACCTCGAAGGCAGGGATAGGGCTTTGGATACGAGACCTACAGGGATAGGGTTTTGCCATAAACCGGAGTTTATGAGTGAAGGCTACTTAGAACTGGCGAGAAGGTTGGCACAAAAGTTTTCAATCCTATGTACGGGTCAATCTAATCTCACATATCCTGCTATTTTCCACGGTAATTCTGATTTATTGGCAAAGAGGCGAAGAAATGGATTCATCATTCAATTTGAATCACTTCAAGAACGAGAAAAAGAACTACCACCCCCTTCCAGTATTTCGATTGAAATACCCATAAATGGTCTTTTTCGTAGAAGTAGAAAGAGTATTCTTGCTTATTTCGATGATCCTCAATACAGAAGAAAGAGTTCGGGAATTACTAAATATGGGACTATAGGGGTCCTAAAAAAAGAGGATTTGATTGAGTATCGAGGCGTCAAAGACTTTAAGCCAAAATACCAAATGCAAATGAAAGTGGATCGATTTTTTTTCATTCCCGAGGAAGTGCATATTTTACCTGAATCTTCTTCCATAATGGTACGGAACAACAGTATCATTGGAGTAGCTACACGACTAACTTTAAGTATAAGAAGCCGAGTAGGCGGATTGGTCCGAGTGGAGAAAAAAAAAAAAAGGATTGAACTCAAAATATTTTCTGGAGATATACATTTTCCTGGAGAGATGGATAAGATATCCCGACACAATGGCATCTTGATACCACCTGAAAGAGTAAAAAAAAATTCTAAGAAATCCAAAAAATGGAAAAATTGGATTTATGTCCAGTGGATCACACCTACCAAGAAAAAGTATTTTGTTTTTGTTCGACCTGTAATCATATATGAACTAGCCGACGGTATAAATTTAGTAACACTTTTCCCACAGGATCTATTGCAAGAAAGGGATAATCTGGAGCTTAGAGTTGTCAATTATATCCTTTATGGAAATGGCAAACCAATTCGGGGAATTTCTGGCACAAGCATTCAATTAGTTCGGACTTGTTTATTGTTGAATTGGGACCGAGACAAAAAAAGCTCTTCGATCGAAGAAGCCCGCGCTTCCTTTGTTGAAGTAAGTACAAATGGTCTGGTTCGAAATTTCCTCCGAATAGACTTAGTGAAATCCGATACTTCTTATATCAGAAAAAGGAAAGATCCGTCAGGAGCAACTGTTCATCGCCATTATGGAAAAATCCTTTACGAAGGAGATACCTTAGTTACATTTATATATGAAAAATCACGATCTGGTGATATAACGCAGGGTCTTCCAAAAGTGGAACAAGTATTAGAAGTGCGTTCGATTGATTCAATATCGATGAGCCTAGAAAAGAGAATTGAGGGTTGGAACGAGCGTATAACAAGAATTCTTGGAATTCCTTGGGGATTTTTGATTGGTGCTGAACTAACTATAGTGCAAAGTCAAGATGGAATGTCTAATGTTTTTTCACCTGGAGAACTAATTGGATTGTTGCGAGCGGAACGAACAGGGCGTGCTTTGGAAGAAGCGATCTGTTACCGAGCCGTATTATTGGGAATAACGAAAGCATCTCTAAATACTCAAAGTTTCATATCGGAAGCAAGTTTTCAAGAAACTGCTCGAGTTTTAGCAAAAGCCGCCCTCCGAGGTCGTATCGATTGGTTGAGAGAGATGATGGAAGCAGGAGTTCATTTTGGTCATGGTACTAGGAAATGGAATCCTAGAATGGCACCTTATATCTCTGCAAAACGTAAAGGTATTAATATTATAAATCTTACTAGAACTGCTCGTTTTTTATCAGAAGCTTGTGATTTAGTTTTTGATGCAGCAAGTAGGGGAAAACAATTCTTAATTGTTGGTACCAAAAATAAAGCAGCGGATTCAGTAGCCCGGGCTGCAACAAGGGCTCGGTGTCATTATGTTAATAAAAAATGGCTCGGGGGTATGTTAACAAATTGGTCTACTACAGAAACGAGACTTCATAAGTTCAGGGACTTAAGAACGGAACAAAAGACGGGGGGACTCAACCGTCTTCCGAAAAGAGATGCCGCTATGTTGAAGAGACAATTATCTCACTTGCAAACATATCTGGGCGGGATTCAATATATGACAGGGTTACCCGATATTGTAATAATCGTCGATCAGCAAGAAGAATATCGGGCTCTTCAAGAATGTTCAGCCATTATAGCTGTTCGTAATCCACAAACCGTTCCTACTGACGGTCAGAATTTCTTCGAATATGTCCTTGAATTCATTCGAGACGTGAGCAAAACTCAGATTGGCGAAGAATATGGTCCATGGGTTCCCTTTATTGGAACTATGTTTCTATTTATTTTTGTTTCGAATTGGTCAGGGGCTCTTTTACCTTGGAAACTCATACAGTTACCTCACGGAGAGTTAGCCGCACCCACAAATGATATAAATACTACTGTTGCTTTAGCTTTACTCACATCAGTAGCATATTTCTATGCGGGTCTTAGCAAAAAAGGATTAAGTTATTTCGGTAAATACATTCAACCAACTCCAATCCTTTTACCCATTAACATCTTAGAAGATTTCACAAAACCCTTATCACTTAGTTTTCGACTTTTCGGAAATATATTAGCTGATGAATTAGTAGTTGTTGTTCTTGAACTTATCATGAATCCACGGATTTCTGCCGCTTCCGTTATTGCTGCTGGGTTGGCCGTTGGGCTTGCTTCTATTGGACCTGGGGTTGGTCAAGGTACTGCTGCGGGCCAAGCTGTAGAAGGGATCGCGAGACAACCCGAGGCGGAGGGAAAAATCCGAGGTACTTTATTGCTTAGTTTGGCTTTTATGGAAGCTTTAACAATTTATGGACTGGTTGTAGCATTAGCACTTTTATTTGCGAATCCTTTTGTTTAA

Protein sequence

MNESLSDDSLSSNEGLRDGTEASIVAGATSNEIASANSLITKQEMVLFLRVKCFSYYDLSTVELAYYSSCSDKRRKEAARRECFLSMKSCCYGSRRATGQSQAGLRITNLRLPKLGGCACFFRPLSKQIIEEVRSKERVALAEKTEKTDLLVSSNRVSKAYSALLAVVHDSAASLSKSLCRDHESAAIEGVVPEPAGRITFVILDLEGRDRALDTRPTGIGFCHKPEFMSEGYLELARRLAQKFSILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFESLQEREKELPPPSSISIEIPINGLFRRSRKSILAYFDDPQYRRKSSGITKYGTIGVLKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEEVHILPESSSIMVRNNSIIGVATRLTLSIRSRVGGLVRVEKKKKRIELKIFSGDIHFPGEMDKISRHNGILIPPERVKKNSKKSKKWKNWIYVQWITPTKKKYFVFVRPVIIYELADGINLVTLFPQDLLQERDNLELRVVNYILYGNGKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIEEARASFVEVSTNGLVRNFLRIDLVKSDTSYIRKRKDPSGATVHRHYGKILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMSLEKRIEGWNERITRILGIPWGFLIGAELTIVQSQDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRGRIDWLREMMEAGVHFGHGTRKWNPRMAPYISAKRKGINIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIQYMTGLPDIVIIVDQQEEYRALQECSAIIAVRNPQTVPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKLIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLELIMNPRISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV

Homology

[Close]

BLAST of Spg037761 vs. NCBI nr
Match: QCE13735.1 (DNA-directed RNA polymerase subunit beta' [Vigna unguiculata])

HSP 1 Score: 1251.1 bits (3236), Expect = 0.0e+00
Identity = 740/1272 (58.18%), Postives = 780/1272 (61.32%), Query Frame = 0


Query: 246  ILCTGQSNLTYPAIFHGNSD--LLAKRRRNGFIIQFESLQEREKELPPPSSISIEIPING 305
            I+ TG  NL  P I H NSD  LL KRRRN FII F+S+QEREKEL P   ISIEIPING
Sbjct: 2295 IIYTGHCNLILPTILHDNSDVFLLTKRRRNRFIIPFQSIQEREKELMPRPGISIEIPING 2354

Query: 306  LFRRSRKSILAYFDDPQYRRKSSGITKYGTIG---VLKKEDLIEYRGVKDFKPKYQMQMK 365
            +FRR+  SILAYFDDPQYRRKSSGITKYGTIG   +LKKEDLIEYRGVK+FKPKY  Q K
Sbjct: 2355 IFRRN--SILAYFDDPQYRRKSSGITKYGTIGLHSILKKEDLIEYRGVKEFKPKY--QTK 2414

Query: 366  VDRFFFIPEEVHILPESSSIMVRNNSIIGVATRLTLSIRSRVGGLVRVEKKKKRIELKIF 425
            VDRFFFIPEEVHILPESSSIMVRNNSIIG+ TR+TL+ RSRVGGLVR+E+KKKRIELKIF
Sbjct: 2415 VDRFFFIPEEVHILPESSSIMVRNNSIIGIDTRITLNTRSRVGGLVRMERKKKRIELKIF 2474

Query: 426  SGDIHFPGEMDKISRHNGILIPPERVKKNSKKSKKWKNWIYVQWITPTKKKYFVFVRPVI 485
            SGDIHFPGEMDKI RH+GILIPP  VKKNSK+SKK KNWIYVQWITPTKKKYFV VRPVI
Sbjct: 2475 SGDIHFPGEMDKIFRHSGILIPPGTVKKNSKESKKLKNWIYVQWITPTKKKYFVLVRPVI 2534

Query: 486  IYELADGINLVTLFPQDLLQERDNLELRVVNYILYGNGKPIRGISGTSIQLVRTCLLLNW 545
            IYE+ADGINL TLFPQD L+ERDNLELRVVNYILYGNGKPIRGISGTSIQLVRTCLLLNW
Sbjct: 2535 IYEIADGINLATLFPQDPLRERDNLELRVVNYILYGNGKPIRGISGTSIQLVRTCLLLNW 2594

Query: 546  DRDKKSSSIEEARASFVEVSTNGLVRNFLRIDLVKSDTSYIRKRKDP------------- 605
            D+DKK+SSIEEAR+SF+EVS NGL+++FLRI+LVKS TSYIRKR DP             
Sbjct: 2595 DQDKKNSSIEEARSSFIEVSANGLIQDFLRINLVKSHTSYIRKRNDPLGSGLTSDNRSDR 2654

Query: 606  ------------------------------------------------------------ 665
                                                                        
Sbjct: 2655 TNINPFDSIYSKARIQQPFSHSQNQGTFRTLLNRSKESQSLIILSSYNCFQMSPFNDLKY 2714

Query: 666  ------------------------------------------------------------ 725
                                                                        
Sbjct: 2715 YNGIKESIKRDLLIPITNSLGPFGTASQIDNFYSFYHLITHNQISLTKYLQLANLKQTSQ 2774

Query: 726  ------------------------------------------------------------ 785
                                                                        
Sbjct: 2775 VFQYYLMDENERISNSDTNILLNSFNLNWHFLHHNYNHNYCDETSTIISLGQFICENLCI 2834

Query: 786  -------------------------------SGATVHRHYGKILYEGDTLVTFIYEKSRS 845
                                            GATVH HYG+IL EGDT VTFIYEKSRS
Sbjct: 2835 AQKGSHLKSGQVIIVQIDSVVIRSAKPYLATPGATVHGHYGEILSEGDTFVTFIYEKSRS 2894

Query: 846  GDITQGLPKVEQVLEVRSIDSISMSLEKRIEGWNERITRILGIPWGFLIGAELTIVQ--- 905
            GDITQGLPKVEQVLEVRSIDSISM+LEKR+EGWNE ITRILGIPWGF+IGAELTIVQ   
Sbjct: 2895 GDITQGLPKVEQVLEVRSIDSISMNLEKRVEGWNECITRILGIPWGFMIGAELTIVQSRI 2954

Query: 906  -----------------------------------SQDGMSNVFSPGELIGLLRAERTGR 965
                                               S+DGMSNVFSPGELIGLLRAERTGR
Sbjct: 2955 SLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGR 3014

Query: 966  ALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRGRIDWLR--------- 1025
            ALEEAICYRA+LLGITKASLNTQSFISEASFQETARVLAKAALRGRIDWL+         
Sbjct: 3015 ALEEAICYRAILLGITKASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLG 3074

Query: 1026 -----------------------------EMMEAGVHFGHGTRKWNPRMAPYISAKRKGI 1085
                                         EMMEAGVHFGHGTRKWNPRMAPYISAKRKGI
Sbjct: 3075 GMIPVEKKKKRRKEVWGEMTRRYWNINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGI 3134

Query: 1086 NIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLG 1124
            +IINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAA +ARCHYVNKKWLG
Sbjct: 3135 HIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAAIKARCHYVNKKWLG 3194

[Close]

BLAST of Spg037761 vs. NCBI nr
Match: KAG8363203.1 (hypothetical protein BUALT_BualtPtG0001100 [Buddleja alternifolia])

HSP 1 Score: 1220.3 bits (3156), Expect = 0.0e+00
Identity = 669/1004 (66.63%), Postives = 733/1004 (73.01%), Query Frame = 0


Query: 222  FCHKPEFMSEGYLELARRLAQKFSILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFES 281
            F  K E     Y +L+R       I+CTG+ NL  P I + NSDL +KRRRN FII  +S
Sbjct: 1058 FSGKKEDRIPDYSDLSR-------IICTGRCNLIDPTILYQNSDLFSKRRRNRFIIPLQS 1117

Query: 282  LQEREKELPPPSSISIEIPINGLFRRSRKSILAYFDDPQYRRKSSGITKYGTI---GVLK 341
            +QERE EL PPS ISIEIPING+FRR+  SILAYFDDP+YRRKSSGITKYGT+    ++K
Sbjct: 1118 IQERENELMPPSGISIEIPINGIFRRN--SILAYFDDPRYRRKSSGITKYGTLEMHSIVK 1177

Query: 342  KEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEEVHILPESSSIMVRNNSIIGVATRLTLSI 401
            KEDLIEY+G K+F+PKY  QMKVDRFFFIPEEVHILP SSSIMVRNNSIIGV T++TL+I
Sbjct: 1178 KEDLIEYQGGKEFRPKY--QMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQITLNI 1237

Query: 402  RSRVGGLVRVEKKKKRIELKIFSGDIHFPGEMDKISRHNGILIPPERVKKNSKKSKKWKN 461
            RSRVGGLVRVE+KKKRIELKI SGDIHFPGE DKISRH+G+LIPP   K+NSK+SKKWKN
Sbjct: 1238 RSRVGGLVRVERKKKRIELKIVSGDIHFPGETDKISRHSGVLIPPGAGKQNSKESKKWKN 1297

Query: 462  WIYVQWITPTKKKYFVFVRPVIIYELADGINLVTLFPQDLLQERDNLELRVVNYILYGNG 521
            WIYVQ ITP+KKKYFV VRPV+ YE+ DGINL TLFP DLLQERDN++LRVVNYILYGN 
Sbjct: 1298 WIYVQRITPSKKKYFVLVRPVVTYEITDGINLATLFPPDLLQERDNVKLRVVNYILYGN- 1357

Query: 522  KPIRGISGTSIQLVRTCLLLNWDRDKKSSSIEEARASFVEVSTNGLVRNFLRIDLVKSDT 581
                                                                        
Sbjct: 1358 ------------------------------------------------------------ 1417

Query: 582  SYIRKRKDPSGATVHRHYGKILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSI 641
                      GATVH HYG+ILYEGDTL+TFIYEKSRSGDITQGLPKVEQVLEVRSI+SI
Sbjct: 1418 ----------GATVHGHYGEILYEGDTLITFIYEKSRSGDITQGLPKVEQVLEVRSIESI 1477

Query: 642  SMSLEKRIEGWNERITRILGIPWGFLIGAELTIVQ------------------------- 701
            SM+LEKR++GWNERIT+ILG+PW FLIGAELTIVQ                         
Sbjct: 1478 SMNLEKRVQGWNERITKILGMPWAFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHI 1537

Query: 702  -------------SQDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNT 761
                         S+DGMSNVFSPGELIGLLRAER GRALEEA+CYRA+LLGIT+ASLNT
Sbjct: 1538 EIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERMGRALEEAVCYRALLLGITRASLNT 1597

Query: 762  QSFISEASFQETARVLAKAALRGRIDWLR--------------------------EMMEA 821
            QSFISEASFQETARVLAKAALRGRIDWL+                          EM+EA
Sbjct: 1598 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGGVWGEMTRRYWNINLEEMLEA 1657

Query: 822  GVHFGHGTRKWNPRMAPYISAKRKGINIINLTRTARFLSEACDLVFDAASRGKQFLIVGT 881
            GVHFGHGTRKWNP+MAPYISAKRKGI+I NLTRTARFLSEACDLVFDAASRGKQFLIVGT
Sbjct: 1658 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 1717

Query: 882  KNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGLNRLPKR 941
            KNKAADSVA AA +ARCH VNKKWLGGMLTNWSTTETRLHKFRDLR EQKTG LNRLPKR
Sbjct: 1718 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKR 1777

Query: 942  DAAMLKRQLSHLQTYLGGIQYMTGLPDIVIIVDQQEEYRALQE----------------- 1001
            DAAM+KRQL  LQTYLGGI+YMTGLPDIVIIVDQ EEY AL+E                 
Sbjct: 1778 DAAMVKRQLFRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 1837

Query: 1002 -----------------------------CSAIIAVRNPQTVPTDGQNFFEYVLEFIRDV 1061
                                         CSA IAVRNPQT+PT GQNFFEYVLEFIRDV
Sbjct: 1838 PDLADISIPANDDAISSIRLILNKLVFAICSATIAVRNPQTIPTGGQNFFEYVLEFIRDV 1897

Query: 1062 SKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKLIQLPHGELAAPTNDINTTVALAL 1112
            SKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWK+I+LPHGELAAPTNDINTTVALAL
Sbjct: 1898 SKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALAL 1957

[Close]

BLAST of Spg037761 vs. NCBI nr
Match: KAG6735380.1 (hypothetical protein POTOM_061997 [Populus tomentosa])

HSP 1 Score: 1204.9 bits (3116), Expect = 0.0e+00
Identity = 658/936 (70.30%), Postives = 724/936 (77.35%), Query Frame = 0


Query: 246  ILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFESLQEREKELPPPSSISIEIPINGLF 305
            I+CTG     YP I H NSDLLAKRR+N FII F+S+Q  EKEL   S I IEIPING+F
Sbjct: 1038 IICTG---FIYPTILHENSDLLAKRRKNRFIIPFQSIQ--EKELMSHSDILIEIPINGIF 1097

Query: 306  RRSRKSILAYFDDPQYRRKSSGITKYGTIGV---LKKEDLIEYRGVKDFKPKYQMQMKVD 365
            RR+  SI AYFDDPQYRRKSSGITKY  IGV   +KKEDL+EYRGVK+F+PKY  QMKVD
Sbjct: 1098 RRN--SIFAYFDDPQYRRKSSGITKYVAIGVHSIVKKEDLVEYRGVKEFQPKY--QMKVD 1157

Query: 366  RFFFIPEEVHILPESSSIMVRNNSIIGVATRLTLSIRSRVGGLVRVEKKKKRIELKIFSG 425
            RFFFIPEEV+ILPESSS+MVRNNSIIGV T++TL+ +SRVGGL+R+E+KKK++ELKIFSG
Sbjct: 1158 RFFFIPEEVYILPESSSLMVRNNSIIGVDTQITLNTKSRVGGLIRIERKKKKMELKIFSG 1217

Query: 426  DIHFPGEMDKISRHNGILIPPERVKKNSKKSKKWKNWIYVQWITPTKKKYFVFVRPVIIY 485
            DIHFP   DKISR++GILIPP  VK NSK+SKK KNWIYVQ ITPTKKK FV VRPV+IY
Sbjct: 1218 DIHFPRATDKISRYSGILIPPGTVKTNSKESKKVKNWIYVQRITPTKKKSFVLVRPVLIY 1277

Query: 486  ELADGINLVTLFPQDLLQERDNLELRVVNYILYGNGKPIRGISGTSIQLVRTCLLLNWDR 545
            E  DGINL  LFP DLLQE++NL+LR+VNYILYGNGKPI+GIS TSIQLVRTCL+LNW++
Sbjct: 1278 ERGDGINLERLFPPDLLQEKENLKLRIVNYILYGNGKPIQGISNTSIQLVRTCLVLNWNQ 1337

Query: 546  DKKSSSIEEARASFVEVSTNGLVRNFLRIDLVKSDTSYI-RKRKDPS------------- 605
            DKKSSSIEEA   FVEVS NGL+R+FLRI L KS  SYI RKR DPS             
Sbjct: 1338 DKKSSSIEEAHVYFVEVSINGLIRDFLRIHLGKSRISYISRKRNDPSGQVLIVHADSVIL 1397

Query: 606  ----------GATVHRHYGKILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSI 665
                      GATVH HYG+ILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSI
Sbjct: 1398 RLAKPYLATPGATVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSI 1457

Query: 666  SMSLEKRIEGWNERITRILGIPWGFLIGAELTIVQ------------------------- 725
            S++LEKR+E WNE ITRI+GIPWGFLIGAELTIVQ                         
Sbjct: 1458 SINLEKRVENWNECITRIVGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHI 1517

Query: 726  -------------SQDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNT 785
                         S+DGMSNVFSPGELIGLLRAER  RALEEAICYR V LGIT+ASL+T
Sbjct: 1518 EIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERAMRALEEAICYRTVFLGITRASLST 1577

Query: 786  QSFISEASFQETARVLAKAALRGRIDWLREMME----AGVHFGHGTRKWNPRMAPYISAK 845
            QSFISEASFQETARVLAKAALRGRIDWL+ + E     GVHFGH TRKWNP+MAPYISAK
Sbjct: 1578 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGVHFGHATRKWNPKMAPYISAK 1637

Query: 846  RKGINIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNK 905
            RKGI+I NLTRTARFLSEACDLVFDAASR KQFLIVGTKNKAAD VARAA RARCHYVNK
Sbjct: 1638 RKGIHITNLTRTARFLSEACDLVFDAASRRKQFLIVGTKNKAADPVARAAIRARCHYVNK 1697

Query: 906  KWLGGMLTNWSTTETRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIQYM 965
            KWLGG+LTNWSTTE RL KFRDLR EQKTGG++RLPK DAA LKRQL HLQTYLGGI+YM
Sbjct: 1698 KWLGGLLTNWSTTEMRLQKFRDLRMEQKTGGIHRLPKGDAARLKRQLFHLQTYLGGIKYM 1757

Query: 966  TGLPDIVIIVDQQEEYRALQECSAIIAVRNPQTVPTDGQNFFEYVLEFIRDVSKTQIGEE 1025
            TGLPDIVIIVDQQEEY ALQECSAI+ VRNPQT+PTD                       
Sbjct: 1758 TGLPDIVIIVDQQEEYMALQECSAIVTVRNPQTIPTD----------------------- 1817

Query: 1026 YGPWVPFIGTMFLFIFVSNWSGALLPWKLIQLPHGELAAPTNDINTTVALALLTSVAYFY 1085
                                 GALLPWK+I+LPHGELAAPTNDINTTVALALLTS+AYFY
Sbjct: 1818 ---------------------GALLPWKIIELPHGELAAPTNDINTTVALALLTSIAYFY 1877

Query: 1086 AGLSKKGLSYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLELIMNP 1112
            AGLSKKGL YFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVL  ++ P
Sbjct: 1878 AGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLV-P 1919

[Close]

BLAST of Spg037761 vs. NCBI nr
Match: KAF9660695.1 (hypothetical protein SADUNF_SadunfPtG0003600 [Salix dunnii])

HSP 1 Score: 1185.2 bits (3065), Expect = 0.0e+00
Identity = 697/1264 (55.14%), Postives = 758/1264 (59.97%), Query Frame = 0


Query: 246  ILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFESLQEREKELPPPSSISIEIPINGLF 305
            I+CTG     YP I H NSDLLAKRR+N FII F+S+Q  EKEL   S I IEIPING+F
Sbjct: 1223 IICTG---FIYPGILHENSDLLAKRRKNRFIIPFQSIQ--EKELMSHSDILIEIPINGIF 1282

Query: 306  RRSRKSILAYFDDPQYRRKSSGITKYGTIGV---LKKEDLIEYRGVKDFKPKYQMQMKVD 365
            RR+  SI AYFDDPQYRRKSSGITKY  IGV   +KKEDL+EYRGVK+F+PKY  QMKVD
Sbjct: 1283 RRN--SIFAYFDDPQYRRKSSGITKYVAIGVQSIVKKEDLVEYRGVKEFQPKY--QMKVD 1342

Query: 366  RFFFIPEEVHILPESSSIMVRNNSIIGVATRLTLSIRSRVGGLVRVEKKKKRIELKIFSG 425
            RFFFIPEEV+ILPESSS+MVRNNSI+GV T++T + +SRVGGL+R+E+KKK++ELKIFSG
Sbjct: 1343 RFFFIPEEVYILPESSSLMVRNNSIVGVDTQITFNTKSRVGGLIRIERKKKKMELKIFSG 1402

Query: 426  DIHFPGEMDKISRHNGILIPPERVKKNSKKSKKWKNWIYVQWITPTKKKYFVFVRPVIIY 485
            DIHFP   DKISR++GILIPP  VK NSK+SKK KNWIYVQ ITPTKKK FV VRPV+IY
Sbjct: 1403 DIHFPRATDKISRYSGILIPPGTVKTNSKESKKVKNWIYVQRITPTKKKSFVLVRPVLIY 1462

Query: 486  ELADGINLVTLFPQDLLQERDNLELRVVNYILYGNGKPIRGISGTSIQLVRTCLLLNWDR 545
            E  DGINL  LFP DLLQE++NL+LRVVNYILYGNGKPI+GIS TSIQLVRTCL+LNW++
Sbjct: 1463 ERGDGINLERLFPPDLLQEKENLKLRVVNYILYGNGKPIQGISNTSIQLVRTCLVLNWNQ 1522

Query: 546  DKKSSSIEEARASFVEVSTNGLVRNFLRIDLVKSDTSYI-RKRKDPS------------- 605
            DKKSSSIEEAR  FVEV  NGL+R+FLRI L KS  SYI RKR D S             
Sbjct: 1523 DKKSSSIEEARVYFVEVRINGLIRDFLRIHLGKSPISYINRKRNDSSSSGLISDNGPDRT 1582

Query: 606  ------------------------------------------------------------ 665
                                                                        
Sbjct: 1583 NTNINPFYSIYPKTRIPQSLKQNQGTISISTLLNRNMECQSLIILSSSNCFRMDPSNGVK 1642

Query: 666  ------------------------------------------------------------ 725
                                                                        
Sbjct: 1643 YYNVIKESTKRDPIIPIRNLLGPLGTALQIANFYSFYHLLTHNRISVIKYLKLANLKLKQ 1702

Query: 726  ------------------------------------------------------------ 785
                                                                        
Sbjct: 1703 TLKVLKYYLMDENGRIVNHDPYSNNVLNPFKLNWYFLHHNYHHNYCEETFTTINLGQFIC 1762

Query: 786  -------------------------------------GATVHRHYGKILYEGDTLVTFIY 845
                                                 GATVH HYG+ILYEGDTLVTFIY
Sbjct: 1763 ENVCMTKNGPPLKSGQVLIVDADSVILRLAKPYLATPGATVHGHYGEILYEGDTLVTFIY 1822

Query: 846  EKSRSGDITQGLPKVEQVLEVRSIDSISMSLEKRIEGWNERITRILGIPWGFLIGAELTI 905
            EKSRSGDITQGLPKVEQVLEVRSIDSIS++LEKR+E WNE ITRI+GIPWGFLIGAELTI
Sbjct: 1823 EKSRSGDITQGLPKVEQVLEVRSIDSISINLEKRVENWNECITRIVGIPWGFLIGAELTI 1882

Query: 906  VQ--------------------------------------SQDGMSNVFSPGELIGLLRA 965
            VQ                                      S+DGMSNVFSPGELIGLLRA
Sbjct: 1883 VQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRA 1942

Query: 966  ERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRGRIDW------ 1025
            ER  RALEEAICYR V LGIT+ASL+TQSFISEASFQETARVLAKAALRGRIDW      
Sbjct: 1943 ERAMRALEEAICYRTVFLGITRASLSTQSFISEASFQETARVLAKAALRGRIDWLKGLKE 2002

Query: 1026 -------------------------------------------------------LREMM 1085
                                                                   L+EM+
Sbjct: 2003 NVVLGGMIPVGTGFKGLTHRSSQHKIIPFKTKKKNLFEGEMRDILFHHREYWNINLKEML 2062

Query: 1086 EAGVHFGHGTRKWNPRMAPYISAKRKGINIINLTRTARFLSEACDLVFDAASRGKQFLIV 1089
            E GVHFGH TRKWNP+MAPYISAKRKGI+I NLTRTARFLSEACDLVFDAASR KQFLIV
Sbjct: 2063 ETGVHFGHATRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRRKQFLIV 2122

[Close]

BLAST of Spg037761 vs. NCBI nr
Match: ERN02618.1 (hypothetical protein AMTR_s00390p00012910 [Amborella trichopoda])

HSP 1 Score: 1025.0 bits (2649), Expect = 5.0e-295
Identity = 620/1200 (51.67%), Postives = 667/1200 (55.58%), Query Frame = 0


Query: 253  NLTYPAIFHGNSD--LLAKRRRNGFIIQFESLQEREKELPPPSSISIEIPINGLFRRSRK 312
            NL +P+I H N D  LLAKRRRN FII F+ +QERE EL   SSISIEIPING+FR++  
Sbjct: 556  NLIFPSILHKNYDLFLLAKRRRNRFIIPFQWIQERENELMLRSSISIEIPINGVFRKN-- 615

Query: 313  SILAYFDDPQYRRKSSGITKYGTIG---VLKKEDLIEYRGVKDFKPKYQMQMKVDRFFFI 372
            SILAYFDDPQYRRKSSGITKYG IG   + KKEDLIEY G+K+ KPKYQ      ++++ 
Sbjct: 616  SILAYFDDPQYRRKSSGITKYGAIGLHSIFKKEDLIEYVGIKELKPKYQ-----TKYYWN 675

Query: 373  PEEVHILPESSSIMVRNNSIIGVATRLTLSIRSRVGGLVRVEKKKKRIELKIFSGDIHFP 432
                H   +  S                     R+G      +KKKRIELKIFSG+I FP
Sbjct: 676  KYTNHFKYKKPS--------------------RRIG---PSGEKKKRIELKIFSGEIQFP 735

Query: 433  GEMDKISRHNGILIPPERVKKNSKKSKKWKNWIYVQWITPTKKKYFVFVRPVIIYELADG 492
             EMDKI RH+GILIPP RVKK  K+SKK KNWIYVQWITPTKKKYFV VRPVIIYE+ADG
Sbjct: 736  VEMDKIFRHSGILIPPGRVKKKIKESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADG 795

Query: 493  INLVTLFPQDLLQERDNLELRVVNYILYGNGKPIRGISGTSIQLVRTCLLLNWDRDKKSS 552
            INL TLFPQDLLQE+DNLELRVVNYILYGNGKPI GISGTSIQLVRTCL+LNWD+D KSS
Sbjct: 796  INLETLFPQDLLQEKDNLELRVVNYILYGNGKPILGISGTSIQLVRTCLMLNWDQDNKSS 855

Query: 553  SIEEARASFVEVSTNGLVRNFLRIDLVKSDTSYIRKRKDP-------------------- 612
            S EEA   FVEVST GL+R+FLRI+L KS+  YIRKR DP                    
Sbjct: 856  SSEEAHVYFVEVSTTGLIRDFLRINLAKSNICYIRKRNDPLGSGLISDNRSDCTNPFYSI 915

Query: 613  ------------------------------------------------------------ 672
                                                                        
Sbjct: 916  YSKEKIQQSLRQNQGTIHTLLNRSKESQSLIILSSSNCFQMSPFKDVQYSNGIKESIKVE 975

Query: 673  ------------------------------------------------------------ 732
                                                                        
Sbjct: 976  PLIPIRNSLGPLGTSSQIENFYYLLKTHNQISVTKYLQLDNFTQPFQVLQYYLMDENGIV 1035

Query: 733  ------------------------------------------------------------ 792
                                                                        
Sbjct: 1036 YNSDPCSNTRLNPFNLNWHFFHNNYDNNYYQKKSPIISLGRFFCENVCIVKHGPHLKSGQ 1095

Query: 793  --------------------SGATVHRHYGKILYEGDTLVTFIYEKSRSGDITQGLPKVE 852
                                 GATVH HYG+ L EGDTLVTFIYEKSRSGDITQGLPKVE
Sbjct: 1096 VIIVQIDSVVIRLAKPYLATPGATVHGHYGEKLSEGDTLVTFIYEKSRSGDITQGLPKVE 1155

Query: 853  QVLEVRSIDSISMSLEKRIEGWNERITRILGIPWGFLIGAELTIVQ-------------- 912
            QVLEVRSIDSISM+LEKR+EGWN+ +TRILGIPWGFLIGAELTIVQ              
Sbjct: 1156 QVLEVRSIDSISMNLEKRVEGWNDLLTRILGIPWGFLIGAELTIVQSRISLVNKIQKVYR 1215

Query: 913  ------------------------SQDGMSNVFSPGELIGLLRAERTGRALEEAICYRAV 972
                                    S+DGMSNVF PGELIGLLRAERTGRALEEAICYRA+
Sbjct: 1216 SQGVQIHNRHIEIIVRQITSKVVVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRAI 1275

Query: 973  LLGITKASLNTQSFISEASFQETARVLAKAALRGRIDWLR-------------------- 1011
            LLGITKASLNTQSFISEASFQETARVLAKAALRGRIDWL+                    
Sbjct: 1276 LLGITKASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKG 1335

[Close]

BLAST of Spg037761 vs. ExPASy Swiss-Prot
Match: Q4VZP3 (DNA-directed RNA polymerase subunit beta'' OS=Cucumis sativus OX=3659 GN=rpoC2 PE=3 SV=1)

HSP 1 Score: 845.9 bits (2184), Expect = 5.4e-244
Identity = 489/773 (63.26%), Postives = 497/773 (64.29%), Query Frame = 0


Query: 246  ILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFESLQEREKELPPPSSISIEIPINGLF 305
            ILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFESLQEREKEL PPS ISIEIPING+F
Sbjct: 550  ILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFESLQEREKELRPPSGISIEIPINGIF 609

Query: 306  RRSRKSILAYFDDPQYRRKSSGITKYGTIGV---LKKEDLIEYRGVKDFKPKYQMQMKVD 365
            RR+  SILA+FDDPQYRR SSGITKYGTIGV   LKKEDLIEYRGVKDFKPKYQMQMKVD
Sbjct: 610  RRN--SILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVD 669

Query: 366  RFFFIPEEVHILPESSSIMVRNNSIIGVATRLTLSIRSRVGGLVRVEKKKKRIELKIFSG 425
            RFFFIPEEVHILPESSSIMVRNNSIIGVATRLTLSIRSRVGGLVRVEKKKKRIELKIFSG
Sbjct: 670  RFFFIPEEVHILPESSSIMVRNNSIIGVATRLTLSIRSRVGGLVRVEKKKKRIELKIFSG 729

Query: 426  DIHFPGEMDKISRHNGILIPPERVKKNSKKSKKWKNWIYVQWITPTKKKYFVFVRPVIIY 485
            DIHFPGEMDKISRHNGILIPPERVKKNSKKSKK KNWIYVQWITPTKKKYFVFVRPVIIY
Sbjct: 730  DIHFPGEMDKISRHNGILIPPERVKKNSKKSKKSKNWIYVQWITPTKKKYFVFVRPVIIY 789

Query: 486  ELADGINLVTLFPQDLLQERDNLELRVVNYILYGNGKPIRGISGTSIQLVRTCLLLNWDR 545
            ELADGINLV LFPQDLLQERDNLELRV NYILYGNGKPIRGISGTSIQLVRTCLLLNWDR
Sbjct: 790  ELADGINLVKLFPQDLLQERDNLELRVANYILYGNGKPIRGISGTSIQLVRTCLLLNWDR 849

Query: 546  DKKSSSIEEARASFVEVSTNGLVRNFLRIDLVKSDTSYIRKRKDP--------------- 605
            DKKSSSIE+ARASFVEVSTNGLVRNFLRIDL KSDT+YIRKRKDP               
Sbjct: 850  DKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYIRKRKDPSGSGLIFNNESDRTN 909

Query: 606  ------------------------------------------------------------ 665
                                                                        
Sbjct: 910  INPFFSIYSKTRVPQSPSQNQGTIRTLLNRNKERQSLIILSASNCLQIDLFNDVKDYNVI 969

Query: 666  ------------------------------------------------------------ 725
                                                                        
Sbjct: 970  KESSKKDPLISIRNSLGPLGAAPQIVNFYSFYYLITHNPISLTKYLQLDNLKQIFQVLKY 1029

Query: 726  ------------------------------------------------------------ 754
                                                                        
Sbjct: 1030 YLMDENGGILNSDPCINIVFNTFNLNWHFLHDNYHNNYCEETPTRISLGQFFFENVCIAK 1089

[Close]

BLAST of Spg037761 vs. ExPASy Swiss-Prot
Match: B1A925 (DNA-directed RNA polymerase subunit beta'' OS=Carica papaya OX=3649 GN=rpoC2 PE=3 SV=1)

HSP 1 Score: 716.1 bits (1847), Expect = 6.5e-205
Identity = 433/838 (51.67%), Postives = 485/838 (57.88%), Query Frame = 0


Query: 178  SLCRDHESAAIEGVVPEPAGRITFVILDLEGRDRALDTRPTGIGFCHKPEFMSEGYLELA 237
            SL +D +   I  +  E     +  + + +GR +   +  +    C  P+     Y E  
Sbjct: 490  SLHKDQDQMNIHSLSVEQESISSLAVNNDQGRHKFFSSNFSDKKKCGIPD-----YSEFH 549

Query: 238  RRLAQKFSILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFESLQEREKELPPPSSISI 297
            R       IL TG  NL Y A  H NSDLLAKRRRN FII F+S+QE+EKEL P S ISI
Sbjct: 550  R-------ILDTGHCNLIYFASLHENSDLLAKRRRNRFIIPFQSIQEQEKELMPRSGISI 609

Query: 298  EIPINGLFRRSRKSILAYFDDPQYRRKSSGITKYGTIG---VLKKEDLIEYRGVKDFKPK 357
            EIPING+FRR+  SILA+FDDP+YRRKSSGI KYGTIG   ++KKED+IEYRGVK FK K
Sbjct: 610  EIPINGIFRRN--SILAFFDDPRYRRKSSGILKYGTIGAHSIVKKEDVIEYRGVKKFKTK 669

Query: 358  YQMQMKVDRFFFIPEEVHILPESSSIMVRNNSIIGVATRLTLSIRSRVGGLVRVEKKKKR 417
            Y  QMKVDRFFFIPEEVHILPESSSIMVRNNSIIGV TR+TL+IRS+VGGLVRVE+KKK 
Sbjct: 670  Y--QMKVDRFFFIPEEVHILPESSSIMVRNNSIIGVDTRITLNIRSQVGGLVRVERKKKS 729

Query: 418  IELKIFSGDIHFPGEMDKISRHNGILIPPERVKKNSKKSKKWKNWIYVQWITPTKKKYFV 477
            IEL+IFSGDIHFPG+ DKISRH+GILIPP R K NSK+SKK KNWIYVQ ITPTKKKYFV
Sbjct: 730  IELQIFSGDIHFPGKTDKISRHSGILIPPGRGKTNSKESKKLKNWIYVQRITPTKKKYFV 789

Query: 478  FVRPVIIYELADGINLVTLFPQDLLQERDNLELRVVNYILYGNGKPIRGISGTSIQLVRT 537
             VRPV  YE+ADGINL TLFPQDL +E+DN++LRVVNYILYGNGKP+RGI  TSIQLVRT
Sbjct: 790  LVRPVATYEIADGINLATLFPQDLFREKDNMQLRVVNYILYGNGKPVRGIFDTSIQLVRT 849

Query: 538  CLLLNWDRDKKSSSIEEARASFVEVSTNGLVRNFLRIDLVKSDT--SYIRKRKDPS---- 597
            CL+LNWD+D KSSS+EE R  FVEVSTN L+R+FLRIDLVKS +  SYIRKR DPS    
Sbjct: 850  CLVLNWDQDNKSSSVEEVRTFFVEVSTNSLIRDFLRIDLVKSQSHISYIRKRNDPSGSGL 909

Query: 598  ------------------------------------------------------------ 657
                                                                        
Sbjct: 910  ISDNGSDRINPFYYKERIQQSLSKNHGTIRTLLNRNKECQSLIILSSSNCFQMGPFNHVK 969

Query: 658  ------------------------------------------------------------ 717
                                                                        
Sbjct: 970  YHNVIKQSIKKDPLIPIRNSLGPVGTAIQIANFYSIYHLITHNQISVTKYFQLDNLNQIF 1029

Query: 718  ------------------------------------------------------------ 754
                                                                        
Sbjct: 1030 EVIKYYLMDETGRVYNPDPCSNIILNPFNLNWYFLYQNYHHNYCEETSTIISLGQFICEN 1089

[Close]

BLAST of Spg037761 vs. ExPASy Swiss-Prot
Match: B1NWE0 (DNA-directed RNA polymerase subunit beta'' OS=Manihot esculenta OX=3983 GN=rpoC2 PE=3 SV=1)

HSP 1 Score: 713.4 bits (1840), Expect = 4.2e-204
Identity = 427/796 (53.64%), Postives = 470/796 (59.05%), Query Frame = 0


Query: 222  FCHKPEFMSEGYLELARRLAQKFSILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFES 281
            F  K E     Y EL R        +CTG  NL Y  I + NSDLLAKRRRN FII F+S
Sbjct: 533  FSGKKESGIPDYSELNRS-------ICTGHCNLIYSTILYKNSDLLAKRRRNKFIIPFQS 592

Query: 282  LQEREKELPPPSSISIEIPINGLFRRSRKSILAYFDDPQYRRKSSGITKYGTIGV---LK 341
            +QEREKEL   S+ISIEIPING+FRR+  S+ AYFDDPQYR+KSSGITKYG IGV   +K
Sbjct: 593  IQEREKELMTQSAISIEIPINGIFRRN--SVFAYFDDPQYRKKSSGITKYGAIGVHSIVK 652

Query: 342  KEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEEVHILPESSSIMVRNNSIIGVATRLTLSI 401
            KEDLIEYRGVK+FKPKY  Q KVDRFFFIPEEV+ILPESSS+MVRNNSIIGV T++ L+ 
Sbjct: 653  KEDLIEYRGVKEFKPKY--QTKVDRFFFIPEEVYILPESSSLMVRNNSIIGVDTQIALNT 712

Query: 402  RSRVGGLVRVEKKKKRIELKIFSGDIHFPGEMDKISRHNGILIPPERVKKNSKKSKKWKN 461
            RSRVGGLVRVE+KKK++ELKIFSGDIHFPGE DKISRH+ ILIPP  VK NSK+SKK KN
Sbjct: 713  RSRVGGLVRVERKKKKMELKIFSGDIHFPGETDKISRHSDILIPPGTVKTNSKESKKVKN 772

Query: 462  WIYVQWITPTKKKYFVFVRPVIIYELADGINLVTLFPQDLLQERDNLELRVVNYILYGNG 521
            WIY+Q ITPTKKKYFV VRPVIIYE+A+GINL TLFPQDLLQE+DNL+LRVVNYILYG G
Sbjct: 773  WIYIQRITPTKKKYFVLVRPVIIYEIANGINLETLFPQDLLQEKDNLKLRVVNYILYGTG 832

Query: 522  KPIRGISGTSIQLVRTCLLLNWDRDKKSSSIEEARASFVEVSTNGLVRNFLRIDLVKSDT 581
            KPIRGIS TSIQLVRTCL+LNWD+DKKSSSIEEARA+FVE+STNGL+R+FLRI+LVK   
Sbjct: 833  KPIRGISDTSIQLVRTCLVLNWDQDKKSSSIEEARAAFVEISTNGLIRDFLRINLVKFHI 892

Query: 582  SYI-RKRKDPS------------------------------------------------- 641
            SYI RKR DPS                                                 
Sbjct: 893  SYIGRKRNDPSGSEPISNNGSDRTNINPFYPIYSKTRVQQSLKQNQGTISTLLNINKECQ 952

Query: 642  ------------------------------------------------------------ 701
                                                                        
Sbjct: 953  SLIILSSSNCFQMDPFNDVKHHNVIKESIKRDPIIPIRNSLGPLGTALQIANFYLFYHLN 1012

Query: 702  ------------------------------------------------------------ 754
                                                                        
Sbjct: 1013 LITHNQISVTKYSKLYNLKQTFQVLKYYLMDENGRIVNPDPCSNSVLNPFNLNWYFLHHN 1072

[Close]

BLAST of Spg037761 vs. ExPASy Swiss-Prot
Match: Q09X27 (DNA-directed RNA polymerase subunit beta'' OS=Morus indica OX=248361 GN=rpoC2 PE=3 SV=1)

HSP 1 Score: 708.0 bits (1826), Expect = 1.8e-202
Identity = 425/767 (55.41%), Postives = 456/767 (59.45%), Query Frame = 0


Query: 246  ILCTGQSNLTYPAIFHGNSD--LLAKRRRNGFIIQFESLQEREKELPPPSSISIEIPING 305
            IL T  SNL +P+I H +SD  LLAKRRRN FII F+ +QEREKEL P SSISIEIPING
Sbjct: 553  ILDTDHSNLIFPSILHKDSDLFLLAKRRRNRFIIPFQWIQEREKELWPRSSISIEIPING 612

Query: 306  LFRRSRKSILAYFDDPQYRRKSSGITKYGTIG---VLKKEDLIEYRGVKDFKPKYQMQMK 365
            +FR++  SILAYFDD QYRRK SGITKYG IG   +LKKEDLIEY GVK+FKPKY  Q K
Sbjct: 613  IFRKN--SILAYFDDLQYRRKGSGITKYGAIGLHSILKKEDLIEYGGVKEFKPKY--QTK 672

Query: 366  VDRFFFIPEEVHILPESSSIMVRNNSIIGVATRLTLSIRSRVGGLVRVEKKKKRIELKIF 425
            VD+FFFIPEEVHILPES SIMVRNNSIIGV TR+TL+ RSRVGGLVRVEKK KRIELKIF
Sbjct: 673  VDQFFFIPEEVHILPESFSIMVRNNSIIGVDTRITLNTRSRVGGLVRVEKKNKRIELKIF 732

Query: 426  SGDIHFPGEMDKISRHNGILIPPERVKKNSKKSKKWKNWIYVQWITPTKKKYFVFVRPVI 485
            SGDIHFP EMDKI RH+GILIPP RVKK  K+SKKWKNWIYVQ ITPTKKKYFV VRPVI
Sbjct: 733  SGDIHFPVEMDKIFRHSGILIPPGRVKKEFKESKKWKNWIYVQSITPTKKKYFVLVRPVI 792

Query: 486  IYELADGINLVTLFPQDLLQERDNLELRVVNYILYGNGKPIRGISGTSIQLVRTCLLLNW 545
            IYE+ADGINL TLFPQD LQE+DNLELRVVNYILYGNGKPI GISGT IQLVRTCL+LNW
Sbjct: 793  IYEIADGINLETLFPQDPLQEKDNLELRVVNYILYGNGKPILGISGTCIQLVRTCLVLNW 852

Query: 546  DRDKKSSSIEEARASFVEVSTNGLVRNFLRIDLVKSDTSYIRKRKDP------------- 605
            D+  KSSS EE  ASFVEVST  L+R+FLRI+LVKS  SYIRKR DP             
Sbjct: 853  DQGNKSSSSEETHASFVEVSTRDLIRDFLRINLVKSHISYIRKRNDPLGSVLISDNRSDR 912

Query: 606  ------------------------------------------------------------ 665
                                                                        
Sbjct: 913  TNPFYSIYSKEKIRQLLKENQGTIHTLLNRSKESQSLIILSSSNCFEMGPFNDVKHYNVI 972

Query: 666  ------------------------------------------------------------ 725
                                                                        
Sbjct: 973  KESIKRDPLIPIRNSLGPLGTACQVANFYYILKTHNQISVTKNLQLENLKQTFQVLKYYL 1032

Query: 726  ------------------------------------------------------------ 754
                                                                        
Sbjct: 1033 MDENGRIYNSDPCSNILFNPFNLNWHFLHHNYCEKKSTIISLGQFFFENVCITKHGPHLK 1092

[Close]

BLAST of Spg037761 vs. ExPASy Swiss-Prot
Match: Q8S8Y1 (DNA-directed RNA polymerase subunit beta'' OS=Atropa belladonna OX=33113 GN=rpoC2 PE=3 SV=1)

HSP 1 Score: 706.8 bits (1823), Expect = 3.9e-202
Identity = 421/795 (52.96%), Postives = 462/795 (58.11%), Query Frame = 0


Query: 221  GFCHKPEFMSEGYLELARRLAQKFSILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFE 280
            GF  K E     Y +L R       I+CTGQ NL Y  I H NSDLL+KRRRN FII   
Sbjct: 532  GFSGKKEDRIPDYSDLNR-------IICTGQYNLVYSPILHENSDLLSKRRRNKFIIPLH 591

Query: 281  SLQEREKELPPPSSISIEIPINGLFRRSRKSILAYFDDPQYRRKSSGITKYGTI---GVL 340
            S+QE E EL P S ISIEIP+NG+FRR+  SILAYFDDP+YRRKSSGI KYGTI    V+
Sbjct: 592  SIQELENELMPCSGISIEIPVNGIFRRN--SILAYFDDPRYRRKSSGIIKYGTIETHSVI 651

Query: 341  KKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEEVHILPESSSIMVRNNSIIGVATRLTLS 400
            KKEDLIEYRGVK+F+PKY  QMKVDRFFFIPEEVHILP SSSIMVRNNSI+GV T++TL+
Sbjct: 652  KKEDLIEYRGVKEFRPKY--QMKVDRFFFIPEEVHILPGSSSIMVRNNSIVGVDTQITLN 711

Query: 401  IRSRVGGLVRVEKKKKRIELKIFSGDIHFPGEMDKISRHNGILIPPERVKKNSKKSKKWK 460
            +RSRVGGLVRVE+KKKRIELKIFSGDIHFPGE DKISRH G+LIPP   K NSK+SKK K
Sbjct: 712  LRSRVGGLVRVERKKKRIELKIFSGDIHFPGETDKISRHTGLLIPPGTGKINSKESKKVK 771

Query: 461  NWIYVQWITPTKKKYFVFVRPVIIYELADGINLVTLFPQDLLQERDNLELRVVNYILYGN 520
             WIYVQ ITP+KKK+FV VRPV+ YE+ DGIN  TLFP D LQERDN++LR+VNYILYGN
Sbjct: 772  KWIYVQRITPSKKKFFVLVRPVVTYEITDGINFETLFPPDPLQERDNVQLRIVNYILYGN 831

Query: 521  GKPIRGISGTSIQLVRTCLLLNWDRDKKSSSIEEARASFVEVSTNGLVRNFLRIDLVKSD 580
            GKPIRGIS TSIQLVRTCL+LNW++DKKSSS EEARASFVE+ TNGL+R+FLRI+LVKS 
Sbjct: 832  GKPIRGISDTSIQLVRTCLVLNWNQDKKSSSCEEARASFVEIRTNGLIRHFLRINLVKSP 891

Query: 581  TSYIRKRKDPS------------------------------------------------- 640
             SYI KR DPS                                                 
Sbjct: 892  ISYIGKRNDPSGSGLLSDNGSDCTNINPFSSIYSYSKAKIQQSLNQPQGTIHTLLNRNKE 951

Query: 641  ------------------------------------------------------------ 700
                                                                        
Sbjct: 952  CQSLIILSSANCSRMGTLKYHSVIKDSIKKDPLIPIRNSLGPLGTCLPIENFYSSYRLIT 1011

Query: 701  ------------------------------------------------------------ 754
                                                                        
Sbjct: 1012 HNQILVTNYLQLDNLKQTFQVIKFKYYLMDENGKIFNPDPCRNIILNPFNLNWYFLHHNY 1071

[Close]

BLAST of Spg037761 vs. ExPASy TrEMBL
Match: A0A4D6NNC8 (Multifunctional fusion protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG11g731 PE=3 SV=1)

HSP 1 Score: 1251.1 bits (3236), Expect = 0.0e+00
Identity = 740/1272 (58.18%), Postives = 780/1272 (61.32%), Query Frame = 0


Query: 246  ILCTGQSNLTYPAIFHGNSD--LLAKRRRNGFIIQFESLQEREKELPPPSSISIEIPING 305
            I+ TG  NL  P I H NSD  LL KRRRN FII F+S+QEREKEL P   ISIEIPING
Sbjct: 2295 IIYTGHCNLILPTILHDNSDVFLLTKRRRNRFIIPFQSIQEREKELMPRPGISIEIPING 2354

Query: 306  LFRRSRKSILAYFDDPQYRRKSSGITKYGTIG---VLKKEDLIEYRGVKDFKPKYQMQMK 365
            +FRR+  SILAYFDDPQYRRKSSGITKYGTIG   +LKKEDLIEYRGVK+FKPKY  Q K
Sbjct: 2355 IFRRN--SILAYFDDPQYRRKSSGITKYGTIGLHSILKKEDLIEYRGVKEFKPKY--QTK 2414

Query: 366  VDRFFFIPEEVHILPESSSIMVRNNSIIGVATRLTLSIRSRVGGLVRVEKKKKRIELKIF 425
            VDRFFFIPEEVHILPESSSIMVRNNSIIG+ TR+TL+ RSRVGGLVR+E+KKKRIELKIF
Sbjct: 2415 VDRFFFIPEEVHILPESSSIMVRNNSIIGIDTRITLNTRSRVGGLVRMERKKKRIELKIF 2474

Query: 426  SGDIHFPGEMDKISRHNGILIPPERVKKNSKKSKKWKNWIYVQWITPTKKKYFVFVRPVI 485
            SGDIHFPGEMDKI RH+GILIPP  VKKNSK+SKK KNWIYVQWITPTKKKYFV VRPVI
Sbjct: 2475 SGDIHFPGEMDKIFRHSGILIPPGTVKKNSKESKKLKNWIYVQWITPTKKKYFVLVRPVI 2534

Query: 486  IYELADGINLVTLFPQDLLQERDNLELRVVNYILYGNGKPIRGISGTSIQLVRTCLLLNW 545
            IYE+ADGINL TLFPQD L+ERDNLELRVVNYILYGNGKPIRGISGTSIQLVRTCLLLNW
Sbjct: 2535 IYEIADGINLATLFPQDPLRERDNLELRVVNYILYGNGKPIRGISGTSIQLVRTCLLLNW 2594

Query: 546  DRDKKSSSIEEARASFVEVSTNGLVRNFLRIDLVKSDTSYIRKRKDP------------- 605
            D+DKK+SSIEEAR+SF+EVS NGL+++FLRI+LVKS TSYIRKR DP             
Sbjct: 2595 DQDKKNSSIEEARSSFIEVSANGLIQDFLRINLVKSHTSYIRKRNDPLGSGLTSDNRSDR 2654

Query: 606  ------------------------------------------------------------ 665
                                                                        
Sbjct: 2655 TNINPFDSIYSKARIQQPFSHSQNQGTFRTLLNRSKESQSLIILSSYNCFQMSPFNDLKY 2714

Query: 666  ------------------------------------------------------------ 725
                                                                        
Sbjct: 2715 YNGIKESIKRDLLIPITNSLGPFGTASQIDNFYSFYHLITHNQISLTKYLQLANLKQTSQ 2774

Query: 726  ------------------------------------------------------------ 785
                                                                        
Sbjct: 2775 VFQYYLMDENERISNSDTNILLNSFNLNWHFLHHNYNHNYCDETSTIISLGQFICENLCI 2834

Query: 786  -------------------------------SGATVHRHYGKILYEGDTLVTFIYEKSRS 845
                                            GATVH HYG+IL EGDT VTFIYEKSRS
Sbjct: 2835 AQKGSHLKSGQVIIVQIDSVVIRSAKPYLATPGATVHGHYGEILSEGDTFVTFIYEKSRS 2894

Query: 846  GDITQGLPKVEQVLEVRSIDSISMSLEKRIEGWNERITRILGIPWGFLIGAELTIVQ--- 905
            GDITQGLPKVEQVLEVRSIDSISM+LEKR+EGWNE ITRILGIPWGF+IGAELTIVQ   
Sbjct: 2895 GDITQGLPKVEQVLEVRSIDSISMNLEKRVEGWNECITRILGIPWGFMIGAELTIVQSRI 2954

Query: 906  -----------------------------------SQDGMSNVFSPGELIGLLRAERTGR 965
                                               S+DGMSNVFSPGELIGLLRAERTGR
Sbjct: 2955 SLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGR 3014

Query: 966  ALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAALRGRIDWLR--------- 1025
            ALEEAICYRA+LLGITKASLNTQSFISEASFQETARVLAKAALRGRIDWL+         
Sbjct: 3015 ALEEAICYRAILLGITKASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLG 3074

Query: 1026 -----------------------------EMMEAGVHFGHGTRKWNPRMAPYISAKRKGI 1085
                                         EMMEAGVHFGHGTRKWNPRMAPYISAKRKGI
Sbjct: 3075 GMIPVEKKKKRRKEVWGEMTRRYWNINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGI 3134

Query: 1086 NIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLG 1124
            +IINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAA +ARCHYVNKKWLG
Sbjct: 3135 HIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAAIKARCHYVNKKWLG 3194

[Close]

BLAST of Spg037761 vs. ExPASy TrEMBL
Match: W1P3W4 (DNA-directed RNA polymerase OS=Amborella trichopoda OX=13333 GN=AMTR_s00390p00012910 PE=3 SV=1)

HSP 1 Score: 1025.0 bits (2649), Expect = 2.4e-295
Identity = 620/1200 (51.67%), Postives = 667/1200 (55.58%), Query Frame = 0


Query: 253  NLTYPAIFHGNSD--LLAKRRRNGFIIQFESLQEREKELPPPSSISIEIPINGLFRRSRK 312
            NL +P+I H N D  LLAKRRRN FII F+ +QERE EL   SSISIEIPING+FR++  
Sbjct: 556  NLIFPSILHKNYDLFLLAKRRRNRFIIPFQWIQERENELMLRSSISIEIPINGVFRKN-- 615

Query: 313  SILAYFDDPQYRRKSSGITKYGTIG---VLKKEDLIEYRGVKDFKPKYQMQMKVDRFFFI 372
            SILAYFDDPQYRRKSSGITKYG IG   + KKEDLIEY G+K+ KPKYQ      ++++ 
Sbjct: 616  SILAYFDDPQYRRKSSGITKYGAIGLHSIFKKEDLIEYVGIKELKPKYQ-----TKYYWN 675

Query: 373  PEEVHILPESSSIMVRNNSIIGVATRLTLSIRSRVGGLVRVEKKKKRIELKIFSGDIHFP 432
                H   +  S                     R+G      +KKKRIELKIFSG+I FP
Sbjct: 676  KYTNHFKYKKPS--------------------RRIG---PSGEKKKRIELKIFSGEIQFP 735

Query: 433  GEMDKISRHNGILIPPERVKKNSKKSKKWKNWIYVQWITPTKKKYFVFVRPVIIYELADG 492
             EMDKI RH+GILIPP RVKK  K+SKK KNWIYVQWITPTKKKYFV VRPVIIYE+ADG
Sbjct: 736  VEMDKIFRHSGILIPPGRVKKKIKESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADG 795

Query: 493  INLVTLFPQDLLQERDNLELRVVNYILYGNGKPIRGISGTSIQLVRTCLLLNWDRDKKSS 552
            INL TLFPQDLLQE+DNLELRVVNYILYGNGKPI GISGTSIQLVRTCL+LNWD+D KSS
Sbjct: 796  INLETLFPQDLLQEKDNLELRVVNYILYGNGKPILGISGTSIQLVRTCLMLNWDQDNKSS 855

Query: 553  SIEEARASFVEVSTNGLVRNFLRIDLVKSDTSYIRKRKDP-------------------- 612
            S EEA   FVEVST GL+R+FLRI+L KS+  YIRKR DP                    
Sbjct: 856  SSEEAHVYFVEVSTTGLIRDFLRINLAKSNICYIRKRNDPLGSGLISDNRSDCTNPFYSI 915

Query: 613  ------------------------------------------------------------ 672
                                                                        
Sbjct: 916  YSKEKIQQSLRQNQGTIHTLLNRSKESQSLIILSSSNCFQMSPFKDVQYSNGIKESIKVE 975

Query: 673  ------------------------------------------------------------ 732
                                                                        
Sbjct: 976  PLIPIRNSLGPLGTSSQIENFYYLLKTHNQISVTKYLQLDNFTQPFQVLQYYLMDENGIV 1035

Query: 733  ------------------------------------------------------------ 792
                                                                        
Sbjct: 1036 YNSDPCSNTRLNPFNLNWHFFHNNYDNNYYQKKSPIISLGRFFCENVCIVKHGPHLKSGQ 1095

Query: 793  --------------------SGATVHRHYGKILYEGDTLVTFIYEKSRSGDITQGLPKVE 852
                                 GATVH HYG+ L EGDTLVTFIYEKSRSGDITQGLPKVE
Sbjct: 1096 VIIVQIDSVVIRLAKPYLATPGATVHGHYGEKLSEGDTLVTFIYEKSRSGDITQGLPKVE 1155

Query: 853  QVLEVRSIDSISMSLEKRIEGWNERITRILGIPWGFLIGAELTIVQ-------------- 912
            QVLEVRSIDSISM+LEKR+EGWN+ +TRILGIPWGFLIGAELTIVQ              
Sbjct: 1156 QVLEVRSIDSISMNLEKRVEGWNDLLTRILGIPWGFLIGAELTIVQSRISLVNKIQKVYR 1215

Query: 913  ------------------------SQDGMSNVFSPGELIGLLRAERTGRALEEAICYRAV 972
                                    S+DGMSNVF PGELIGLLRAERTGRALEEAICYRA+
Sbjct: 1216 SQGVQIHNRHIEIIVRQITSKVVVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRAI 1275

Query: 973  LLGITKASLNTQSFISEASFQETARVLAKAALRGRIDWLR-------------------- 1011
            LLGITKASLNTQSFISEASFQETARVLAKAALRGRIDWL+                    
Sbjct: 1276 LLGITKASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKG 1335

[Close]

BLAST of Spg037761 vs. ExPASy TrEMBL
Match: A0A3Q7XSM6 (DNA-directed RNA polymerase OS=Cicer arietinum OX=3827 GN=LOC113784809 PE=3 SV=1)

HSP 1 Score: 962.2 bits (2486), Expect = 1.9e-276
Identity = 549/960 (57.19%), Postives = 602/960 (62.71%), Query Frame = 0


Query: 246  ILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFESLQEREKELPPPSSISIEIPINGLF 305
            I+CT  S+L Y AIF+    LLAKRRRN F+I F+ +QE++ +L  PS +SIEIPING+F
Sbjct: 551  IICTDYSHLMYSAIFNNIFYLLAKRRRNRFVIPFQWIQEQKNKLMSPSGVSIEIPINGIF 610

Query: 306  RRSRKSILAYFDDPQYRRKSSGITKYGTIGV---LKKEDLIEYRGVKDFKPKYQMQMKVD 365
             R+  SILAYFDDPQYRR++SGITKY TIG+    +KEDLIEYRG+K+ KPKY  Q KVD
Sbjct: 611  HRN--SILAYFDDPQYRRQNSGITKYRTIGIHSLFQKEDLIEYRGIKELKPKY--QNKVD 670

Query: 366  RFFFIPEEVHILPESSSIMVRNNSIIGVATRLTLSIRSRVGGLVRVEKKKKRIELKIFSG 425
            RFFFIPEEVHILPESSSIM+RNNS++G+ T +TL+IRSRVGGLVR+EKKKK+IELKIFSG
Sbjct: 671  RFFFIPEEVHILPESSSIMIRNNSLVGIGTPITLNIRSRVGGLVRLEKKKKKIELKIFSG 730

Query: 426  DIHFPGEMDKISRHNGILIPPERVKKNSKK-SKKWKNWIYVQWITPTKKKYFVFVRPVII 485
            +IHFPGEMDKISRH+ ILIPP  VKK  +K +KK  NWIYVQWI  TKKKYFV VRPVI+
Sbjct: 731  NIHFPGEMDKISRHSSILIPPGTVKKKKRKEAKKINNWIYVQWIATTKKKYFVLVRPVIL 790

Query: 486  YELADGINLVTLFPQDLLQERDNLELRVVNYILYGNGKPIRGISGTSIQLVRTCLLLNWD 545
            YE+ D I+ V LFPQDL QERDNLELRV+NYILYGNGK IRGIS T IQLVRTCL+LNWD
Sbjct: 791  YEIPDSIHFVKLFPQDLFQERDNLELRVLNYILYGNGKSIRGISDTRIQLVRTCLVLNWD 850

Query: 546  RDKKSSSIEEARASFVEVSTNGLVRNFLRIDLVKSDTSYIRKRKDPS------------- 605
            + KKSSSIEEA ASFVEVSTNGL+  F+RIDLVKS  SYIRKR DPS             
Sbjct: 851  QGKKSSSIEEAPASFVEVSTNGLIEYFIRIDLVKSHMSYIRKRNDPSGLGLIPDKESDRV 910

Query: 606  ------------------------------------------------------------ 665
                                                                        
Sbjct: 911  NINPFFSIHSKTKIQQSLIQNHGTIRMLLNRNKECRSWIILSSSNCFQMRPFNNVKYHNG 970

Query: 666  ------------------------------------------------------------ 725
                                                                        
Sbjct: 971  IKKDPIIPINNKNSLGPLGIALQVANYYSFYRLITHNQVSITNNLQLDKLIEICHVMKYY 1030

Query: 726  ------------------------------------------------------------ 785
                                                                        
Sbjct: 1031 LMDENDKIFKPDLSKNIVLNPFHLNWYFLHHNYFEKTLTIISLGQFICENICITQKKNEP 1090

Query: 786  -----------------------------GATVHRHYGKILYEGDTLVTFIYEKSRSGDI 845
                                         GAT+H HYG+IL EGD LVTFIYEKSRSGDI
Sbjct: 1091 HLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEILDEGDILVTFIYEKSRSGDI 1150

Query: 846  TQGLPKVEQVLEVRSIDSISMSLEKRIEGWNERITRILGIPWGFLIGAELTIVQ------ 905
            TQGLPKVEQ+LE+RSIDSISM+LEKRI+ WNE I RILGIPWGFLIGAELTI Q      
Sbjct: 1151 TQGLPKVEQILEIRSIDSISMNLEKRIDAWNECIPRILGIPWGFLIGAELTIAQSRISLV 1210

Query: 906  --------------------------------SQDGMSNVFSPGELIGLLRAERTGRALE 919
                                            S+DGMSNVF PGELIGLLRAERTGRALE
Sbjct: 1211 NKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALE 1270

[Close]

BLAST of Spg037761 vs. ExPASy TrEMBL
Match: A0A6H0EPT4 (DNA-directed RNA polymerase subunit beta'' OS=Luffa aegyptiaca OX=3670 GN=rpoC2 PE=3 SV=1)

HSP 1 Score: 860.5 bits (2222), Expect = 7.9e-246
Identity = 496/772 (64.25%), Postives = 501/772 (64.90%), Query Frame = 0


Query: 246  ILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFESLQEREKELPPPSSISIEIPINGLF 305
            ILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFESLQEREKELPPPS ISIEIPING+F
Sbjct: 546  ILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFESLQEREKELPPPSGISIEIPINGIF 605

Query: 306  RRSRKSILAYFDDPQYRRKSSGITKYGTIGV---LKKEDLIEYRGVKDFKPKYQMQMKVD 365
            RR+  SILAYFDDPQYRR SSGITKYGTIGV   LKKEDLIEYRGVKDFKPKYQMQMKVD
Sbjct: 606  RRN--SILAYFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVD 665

Query: 366  RFFFIPEEVHILPESSSIMVRNNSIIGVATRLTLSIRSRVGGLVRVEKKKKRIELKIFSG 425
            RFFFIPEEVHILPESSSIMVRNNSIIGVATRLTLSIRSRVGGLVRVEKKKKRIELKIFSG
Sbjct: 666  RFFFIPEEVHILPESSSIMVRNNSIIGVATRLTLSIRSRVGGLVRVEKKKKRIELKIFSG 725

Query: 426  DIHFPGEMDKISRHNGILIPPERVKKNSKKSKKWKNWIYVQWITPTKKKYFVFVRPVIIY 485
            DIHFPGEMDKISRHNGILIPPERVKKNSKKSKK KNWIYVQWITPTKKKYFVFVRPVIIY
Sbjct: 726  DIHFPGEMDKISRHNGILIPPERVKKNSKKSKKLKNWIYVQWITPTKKKYFVFVRPVIIY 785

Query: 486  ELADGINLVTLFPQDLLQERDNLELRVVNYILYGNGKPIRGISGTSIQLVRTCLLLNWDR 545
            ELADGINLVTLFPQDLLQERDNLELRVVNYILYGNGKPIRGISGTSIQLVRTCLLLNWDR
Sbjct: 786  ELADGINLVTLFPQDLLQERDNLELRVVNYILYGNGKPIRGISGTSIQLVRTCLLLNWDR 845

Query: 546  DKKSSSIEEARASFVEVSTNGLVRNFLRIDLVKSDTSYIRKRKDP--------------- 605
            DKKSSSIEEARASFVEVSTNGLVRNFLRIDLVKSDTSYIRKRKDP               
Sbjct: 846  DKKSSSIEEARASFVEVSTNGLVRNFLRIDLVKSDTSYIRKRKDPSGSGLIFNNESDRTN 905

Query: 606  ------------------------------------------------------------ 665
                                                                        
Sbjct: 906  INPFFSIYSKTRVPQSLSQNQGTIRTLLNRNKERQSLIILSASNCLQMDLFNDVKDYNVI 965

Query: 666  ------------------------------------------------------------ 725
                                                                        
Sbjct: 966  KESSKKDPLEIRNSLGPLGAAPQIVNFYSFYQLITHNPISLTKYLQLDNFKQTFQVLKYY 1025

Query: 726  ------------------------------------------------------------ 754
                                                                        
Sbjct: 1026 LMDENGGILNSDPCSNIVFNTFNLNWHFLHHNYHNSYCEETPTRISLGQFFFENVCIAKN 1085

[Close]

BLAST of Spg037761 vs. ExPASy TrEMBL
Match: A0A6H0ER20 (DNA-directed RNA polymerase subunit beta'' OS=Trichosanthes baviensis OX=1054457 GN=rpoC2 PE=3 SV=1)

HSP 1 Score: 860.5 bits (2222), Expect = 7.9e-246
Identity = 496/772 (64.25%), Postives = 501/772 (64.90%), Query Frame = 0


Query: 246  ILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFESLQEREKELPPPSSISIEIPINGLF 305
            ILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFESLQEREKELPPPS ISIEIPING+F
Sbjct: 546  ILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFESLQEREKELPPPSGISIEIPINGIF 605

Query: 306  RRSRKSILAYFDDPQYRRKSSGITKYGTIGV---LKKEDLIEYRGVKDFKPKYQMQMKVD 365
            RR+  SILAYFDDPQYRR SSGITKYGTIGV   LKKEDLIEYRGVKDFKPKYQMQMKVD
Sbjct: 606  RRN--SILAYFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVD 665

Query: 366  RFFFIPEEVHILPESSSIMVRNNSIIGVATRLTLSIRSRVGGLVRVEKKKKRIELKIFSG 425
            RFFFIPEEVHILPESSSIMVRNNSIIGVATRLTLSIRSRVGGLVRVEKKKKRIELKIFSG
Sbjct: 666  RFFFIPEEVHILPESSSIMVRNNSIIGVATRLTLSIRSRVGGLVRVEKKKKRIELKIFSG 725

Query: 426  DIHFPGEMDKISRHNGILIPPERVKKNSKKSKKWKNWIYVQWITPTKKKYFVFVRPVIIY 485
            DIHFPGEMDKISRHNGILIPPERVKKNSKKSKK KNWIYVQWITPTKKKYFVFVRPVIIY
Sbjct: 726  DIHFPGEMDKISRHNGILIPPERVKKNSKKSKKLKNWIYVQWITPTKKKYFVFVRPVIIY 785

Query: 486  ELADGINLVTLFPQDLLQERDNLELRVVNYILYGNGKPIRGISGTSIQLVRTCLLLNWDR 545
            ELADGINLVTLFPQDLLQERDNLELRVVNYILYGNGKPIRGISGTSIQLVRTCLLLNWDR
Sbjct: 786  ELADGINLVTLFPQDLLQERDNLELRVVNYILYGNGKPIRGISGTSIQLVRTCLLLNWDR 845

Query: 546  DKKSSSIEEARASFVEVSTNGLVRNFLRIDLVKSDTSYIRKRKDP--------------- 605
            DKKSSSIEEARASFVEVSTNGLVRNFLRIDLVKSDTSYIRKRKDP               
Sbjct: 846  DKKSSSIEEARASFVEVSTNGLVRNFLRIDLVKSDTSYIRKRKDPSGSGLIFNNESDRTN 905

Query: 606  ------------------------------------------------------------ 665
                                                                        
Sbjct: 906  INPFFSIYSKTRVPQSLSQNQGTIRTLLNRNKERQSLIILSASNCLQMDLVNDVKDYNVI 965

Query: 666  ------------------------------------------------------------ 725
                                                                        
Sbjct: 966  KESSKKDPLKIRNSLGPLGAAPQIVNFDSFYQLITHNPISLTKYLQLDNLKQTFQVLKYY 1025

Query: 726  ------------------------------------------------------------ 754
                                                                        
Sbjct: 1026 LMDENGGILNSDPCSNIVFNTFNLNWHFLHHNYHHSYCEETPTRISLGQFFFENVWIAKN 1085

[Close]

BLAST of Spg037761 vs. TAIR 10
Match: ATCG00170.1 (DNA-directed RNA polymerase family protein )

HSP 1 Score: 672.2 bits (1733), Expect = 7.6e-193
Identity = 402/768 (52.34%), Postives = 451/768 (58.72%), Query Frame = 0


Query: 247  LCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFESLQEREKELPPPSSISIEIPINGLFR 306
            L T   NL Y AIFH NSDLLAKRRRN F+I F+S+QE+EKE  P S IS+EIPING+FR
Sbjct: 549  LGTSHYNLIYSAIFHENSDLLAKRRRNRFLIPFQSIQEQEKEFIPQSGISVEIPINGIFR 608

Query: 307  RSRKSILAYFDDPQYRRKSSGITKYGTI---GVLKKEDLIEYRGVKDFKPKYQMQMKVDR 366
            R+  SI A+FDDP+YRRKSSGI KYGT+    +++KED+IEYRGV+  K KY  +MKVDR
Sbjct: 609  RN--SIFAFFDDPRYRRKSSGILKYGTLKADSIIQKEDMIEYRGVQKIKTKY--EMKVDR 668

Query: 367  FFFIPEEVHILPESSSIMVRNNSIIGVATRLTLSIRSRVGGLVRVEKKKKRIELKIFSGD 426
            FFFIPEEVHILPESS+IMV+N SIIGV TRLTL+IRS+VGGL+RVEKKKKRIELKIFSGD
Sbjct: 669  FFFIPEEVHILPESSAIMVQNYSIIGVDTRLTLNIRSQVGGLIRVEKKKKRIELKIFSGD 728

Query: 427  IHFPGEMDKISRHNGILIPPERVKKNSKKSKKWKNWIYVQWITPTKKKYFVFVRPVIIYE 486
            IHFP + DKISRH+GILIPP R KKNSK+SKK+KNWIYVQ ITPTKKK+FV VRPV  YE
Sbjct: 729  IHFPDKTDKISRHSGILIPPGRGKKNSKESKKFKNWIYVQRITPTKKKFFVLVRPVATYE 788

Query: 487  LADGINLVTLFPQDLLQERDNLELRVVNYILYGNGKPIRGISGTSIQLVRTCLLLNWDRD 546
            +AD INL TLFPQDL +E+DN++LRV NYILYGNGKP RGIS TSIQLVRTCL+LNWD  
Sbjct: 789  IADSINLATLFPQDLFREKDNIQLRVFNYILYGNGKPTRGISDTSIQLVRTCLVLNWD-- 848

Query: 547  KKSSSIEEARASFVEVSTNGLVRNFLRIDLVKSDTSYIRKR------------------- 606
             K+SS+EE RA FVEVST GL+++F+RI LVKS  SYIRKR                   
Sbjct: 849  -KNSSLEEVRAFFVEVSTKGLIQDFIRIGLVKSHISYIRKRNNSPDSGLISADHMNPFYS 908

Query: 607  ------------------------------------------------------------ 666
                                                                        
Sbjct: 909  ISPKSGILQQSLRQNHGTIRMFLNRNKESQSLLILSSSNCFRMGPFNHVKHHNVINQSIK 968

Query: 667  ------------------------------------------------------------ 726
                                                                        
Sbjct: 969  KNTLITIKNSSGPLGTATPISNFYSFLPLLTYNQISLIKYFQLDNLKYIFQKINSYLIDE 1028

Query: 727  -------------------------------------------------------KDP-- 754
                                                                   K+P  
Sbjct: 1029 NGIILNLDPYSNVVLNPFKLNWYFLHQNYHHNYCEETSTIISLGQFFCENVCIAKKEPHL 1088

[Close]

BLAST of Spg037761 vs. TAIR 10
Match: ATCG00160.1 (ribosomal protein S2 )

HSP 1 Score: 318.5 bits (815), Expect = 2.1e-86
Identity = 155/171 (90.64%), Postives = 162/171 (94.74%), Query Frame = 0


Query: 748 LREMMEAGVHFGHGTRKWNPRMAPYISAKRKGINIINLTRTARFLSEACDLVFDAASRGK 807
           L EMM AGVHFGHGTRKWNPRMAPYISAKRKGI+IINLTRTARFLSEACDLVFDAASRGK
Sbjct: 10  LEEMMRAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGK 69

Query: 808 QFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGG 867
           QFLIVGTKNKAAD V+RAA RARCHYVNKKWLGGMLTNWSTTE RLHKFRDLRTEQKT G
Sbjct: 70  QFLIVGTKNKAADLVSRAAIRARCHYVNKKWLGGMLTNWSTTEKRLHKFRDLRTEQKTEG 129

Query: 868 LNRLPKRDAAMLKRQLSHLQTYLGGIQYMTGLPDIVIIVDQQEEYRALQEC 919
            NRLPKRDAA+LKRQLS L+TYLGGI+YMTGLPDIVII+DQQEEY AL+EC
Sbjct: 130 FNRLPKRDAAVLKRQLSRLETYLGGIKYMTGLPDIVIILDQQEEYTALREC 180

[Close]

BLAST of Spg037761 vs. TAIR 10
Match: ATCG00150.1 (ATPase, F0 complex, subunit A protein )

HSP 1 Score: 288.5 bits (737), Expect = 2.4e-77
Identity = 150/194 (77.32%), Postives = 167/194 (86.08%), Query Frame = 0


Query: 919  SAIIAVRNPQTVPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSG 978
            SA++A+RNPQT+PTDGQNFFE+VLEFIRDVSKTQIGEEYGPWVPFIGT+FLFIFVSNWSG
Sbjct: 55   SAVLAIRNPQTIPTDGQNFFEFVLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSG 114

Query: 979  ALLPWKLIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILL 1038
            ALLPWK+IQLP GELAAPTNDINTTVALALLTSVAYFYAGLSKKGL YF KYIQPTPILL
Sbjct: 115  ALLPWKIIQLPQGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLGYFSKYIQPTPILL 174

Query: 1039 PINILEDFTKPLSLSFRLFGNILADELVVVVLELIMNPRISAASVIAAGL-AVGLASIGP 1098
            PINILEDFTKPLSLSFRLFGNILADELVVVVL  ++ P +    V+  GL   G+ ++  
Sbjct: 175  PINILEDFTKPLSLSFRLFGNILADELVVVVLVSLV-PLVVPIPVMFLGLFTSGIQALIF 234

Query: 1099 GVGQGTAAGQAVEG 1112
                    G+++EG
Sbjct: 235  ATLAAAYIGESMEG 247

[Close]

BLAST of Spg037761 vs. TAIR 10
Match: ATCG00140.1 (ATP synthase subunit C family protein )

HSP 1 Score: 139.8 bits (351), Expect = 1.4e-32
Identity = 79/81 (97.53%), Postives = 80/81 (98.77%), Query Frame = 0


Query: 1074 MNPRISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFM 1133
            MNP +SAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFM
Sbjct: 1    MNPLVSAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFM 60

Query: 1134 EALTIYGLVVALALLFANPFV 1155
            EALTIYGLVVALALLFANPFV
Sbjct: 61   EALTIYGLVVALALLFANPFV 81

The following BLAST results are available for this feature:

BLAST of Spg037761 vs. NCBI nr


Match Name	E-value	Identity	Description
QCE13735.1	0.0e+00	58.18	DNA-directed RNA polymerase subunit beta' [Vigna unguiculata]	[more]
KAG8363203.1	0.0e+00	66.63	hypothetical protein BUALT_BualtPtG0001100 [Buddleja alternifolia]	[more]
KAG6735380.1	0.0e+00	70.30	hypothetical protein POTOM_061997 [Populus tomentosa]	[more]
KAF9660695.1	0.0e+00	55.14	hypothetical protein SADUNF_SadunfPtG0003600 [Salix dunnii]	[more]
ERN02618.1	5.0e-295	51.67	hypothetical protein AMTR_s00390p00012910 [Amborella trichopoda]	[more]

BLAST of Spg037761 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZP3	5.4e-244	63.26	DNA-directed RNA polymerase subunit beta'' OS=Cucumis sativus OX=3659 GN=rpoC2 P...	[more]
B1A925	6.5e-205	51.67	DNA-directed RNA polymerase subunit beta'' OS=Carica papaya OX=3649 GN=rpoC2 PE=...	[more]
B1NWE0	4.2e-204	53.64	DNA-directed RNA polymerase subunit beta'' OS=Manihot esculenta OX=3983 GN=rpoC2...	[more]
Q09X27	1.8e-202	55.41	DNA-directed RNA polymerase subunit beta'' OS=Morus indica OX=248361 GN=rpoC2 PE...	[more]
Q8S8Y1	3.9e-202	52.96	DNA-directed RNA polymerase subunit beta'' OS=Atropa belladonna OX=33113 GN=rpoC...	[more]

BLAST of Spg037761 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A4D6NNC8	0.0e+00	58.18	Multifunctional fusion protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG11g731 PE...	[more]
W1P3W4	2.4e-295	51.67	DNA-directed RNA polymerase OS=Amborella trichopoda OX=13333 GN=AMTR_s00390p0001...	[more]
A0A3Q7XSM6	1.9e-276	57.19	DNA-directed RNA polymerase OS=Cicer arietinum OX=3827 GN=LOC113784809 PE=3 SV=1	[more]
A0A6H0EPT4	7.9e-246	64.25	DNA-directed RNA polymerase subunit beta'' OS=Luffa aegyptiaca OX=3670 GN=rpoC2 ...	[more]
A0A6H0ER20	7.9e-246	64.25	DNA-directed RNA polymerase subunit beta'' OS=Trichosanthes baviensis OX=1054457...	[more]

BLAST of Spg037761 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00170.1	7.6e-193	52.34	DNA-directed RNA polymerase family protein	[more]
ATCG00160.1	2.1e-86	90.64	ribosomal protein S2	[more]
ATCG00150.1	2.4e-77	77.32	ATPase, F0 complex, subunit A protein	[more]
ATCG00140.1	1.4e-32	97.53	ATP synthase subunit C family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001865	Ribosomal protein S2	PRINTS	PR00395	RIBOSOMALS2	coord: 779..788 score: 57.08 coord: 748..766 score: 46.4 coord: 829..846 score: 46.92 coord: 900..917 score: 39.83
IPR001865	Ribosomal protein S2	PFAM	PF00318	Ribosomal_S2	coord: 751..919 e-value: 2.4E-55 score: 187.1
IPR001865	Ribosomal protein S2	CDD	cd01425	RPS2	coord: 751..924 e-value: 4.62512E-57 score: 193.567
IPR038662	F1F0 ATP synthase subunit C superfamily	GENE3D	1.20.20.10	F1F0 ATP synthase subunit C	coord: 1074..1151 e-value: 2.7E-30 score: 106.3
IPR005706	Ribosomal protein S2, bacteria/mitochondria/plastid	TIGRFAM	TIGR01011	TIGR01011	coord: 748..920 e-value: 1.3E-56 score: 189.3
IPR005706	Ribosomal protein S2, bacteria/mitochondria/plastid	HAMAP	MF_00291_B	Ribosomal_S2_B	coord: 737..1029 score: 28.129175
None	No IPR available	GENE3D	1.10.150.390		coord: 720..752 e-value: 6.2E-11 score: 43.6
None	No IPR available	GENE3D	3.40.50.10490		coord: 753..931 e-value: 5.3E-49 score: 168.1
None	No IPR available	GENE3D	1.10.287.610	Helix hairpin bin	coord: 844..894 e-value: 1.1E-24 score: 88.4
None	No IPR available	PANTHER	PTHR19376:SF47	DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA''	coord: 616..675
None	No IPR available	PANTHER	PTHR19376	DNA-DIRECTED RNA POLYMERASE	coord: 616..675 coord: 245..600 coord: 674..753
None	No IPR available	PANTHER	PTHR19376:SF47	DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA''	coord: 245..600 coord: 674..753
None	No IPR available	CDD	cd00310	ATP-synt_Fo_a_6	coord: 957..1092 e-value: 2.10953E-35 score: 130.212
None	No IPR available	CDD	cd18183	ATP-synt_Fo_c_ATPH	coord: 1078..1151 e-value: 1.21465E-43 score: 150.762
None	No IPR available	SUPERFAMILY	64484	beta and beta-prime subunits of DNA dependent RNA-polymerase	coord: 582..753
IPR002379	V-ATPase proteolipid subunit C-like domain	PFAM	PF00137	ATP-synt_C	coord: 1084..1146 e-value: 4.0E-17 score: 62.3
IPR000568	ATP synthase, F0 complex, subunit A	PFAM	PF00119	ATP-synt_A	coord: 921..1083 e-value: 2.1E-40 score: 138.9
IPR000568	ATP synthase, F0 complex, subunit A	TIGRFAM	TIGR01131	TIGR01131	coord: 921..1089 e-value: 8.2E-33 score: 112.1
IPR000568	ATP synthase, F0 complex, subunit A	HAMAP	MF_01393	ATP_synth_a_bact	coord: 893..1148 score: 11.652815
IPR005953	ATP synthase, F0 complex, subunit C, bacterial/chloroplast	TIGRFAM	TIGR01260	TIGR01260	coord: 1093..1150 e-value: 1.4E-17 score: 61.4
IPR018130	Ribosomal protein S2, conserved site	PROSITE	PS00962	RIBOSOMAL_S2_1	coord: 748..759
IPR020537	ATP synthase, F0 complex, subunit C, DCCD-binding site	PROSITE	PS00605	ATPASE_C	coord: 1113..1134
IPR023011	ATP synthase, F0 complex, subunit A, active site	PROSITE	PS00449	ATPASE_A	coord: 1051..1060
IPR000454	ATP synthase, F0 complex, subunit C	HAMAP	MF_01396	ATP_synth_c_bact	coord: 1083..1148 score: 15.766577
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	81333	F1F0 ATP synthase subunit C	coord: 1078..1152
IPR023591	Ribosomal protein S2, flavodoxin-like domain superfamily	SUPERFAMILY	52313	Ribosomal protein S2	coord: 748..920
IPR035908	ATP synthase, F0 complex, subunit A superfamily	SUPERFAMILY	81336	F1F0 ATP synthase subunit A	coord: 955..1074

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg037761.1	Spg037761.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0006412	translation
biological_process	GO:1902600	proton transmembrane transport
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component	GO:0015935	small ribosomal subunit
cellular_component	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain
cellular_component	GO:0005840	ribosome
molecular_function	GO:1901363	heterocyclic compound binding
molecular_function	GO:0043167	ion binding
molecular_function	GO:0097159	organic cyclic compound binding
molecular_function	GO:0015078	proton transmembrane transporter activity
molecular_function	GO:0036094	small molecule binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0016740	transferase activity