Spg037661 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg037661
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	PMD domain-containing protein
Location	scaffold2: 50615306 .. 50618284 (-)
RNA-Seq Expression	Spg037661
Synteny	Spg037661

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAATTCAGGCTGATCATTCTCTCACTTCTGTTTCCTCGGGCAGTGATCATCTCCTGATTCAGGCGGAATTTGAGCTGGTCACTTGCCCTTCACATCTTGCCTCGAGTAGTGATCAACCCCTGATTCAGGCAGAATTCAGGCTGATCACTCGCCCTTCACATCTTGCCTCGGGCAGTGATCAACCCCTGATTCAGGCGGAATTCAGGTTGATCACTCCTCCTTCACATCCTGCCTCGGGTAGTGATCAACCCTTGATTCAGGTGAAATTCAGGCTGATCACTCGTTCTTCATATCTTGCCTCAGGCAGTGATCAACCCCTGATTCAGGCGGAATTCAGGTTGATCACTCGCCCTTTACATCCTGCTTCGGGCAGTGATCAACCCCTGATTCAGGCTGATCACTCGTCTTTCACATCCTGTCTCGGGCAGTGATCAACCCCTGATTCAGAGGGAATGCAGGCTAATCACTTGCCCTCCTTTCATCCTGCCTCGGAAGTGATCAACCCCTAATTCAGGCGGAATTTAGGCTGATCACTTTATATTATGTGATTTAATGATATCATCATCATTGTTTTGACCAATGTCATATTTTTTCTTTTAATCTCATATTTTTTTTTCTTTGTAGGAACATGGTGCATTTCACAGAGCTTTCAGATGATGGGAAGAAAAGTCTGGTTGTTCTACTAGACAAAGATCAACCTATCAAAAGTGGGACCATTCTTCCAATAGAGACTTCAATTACAGAGTCAAACCTCAAATTGGACAAATCTTATTTTCTTTCAGAATGATCTGTAGAAAAGACTCAAGGCCAACACTCTTCGACTAAGGTTTGGATTCTACGGTCTTCTTTACACGGAAAAAAGCCAAATGTCAATTCAGAACCGACGTTGGGGCGTCGCATCGTTGAAAATCAAGTTCATTGGGGGCCATTGCTGAAATTCAGCGGAGAATTTACTCACATTGCTTGTTACTGGGAGTGGCTGGAATTTGTCATTGCACGGAACAAGAAACTACTACAAGGCTCTGGTTTATATGCAGTTGTGATAACTTCTTTATACTCCTATGATCGCAACAATGACATAGTTCGGGCCTTTTGTGAAGCCTGGTGTCCTTCAACCAACACCCTCACACTTCGTCTGGAGAAATATCCCTTTCTTTGTGGGACATGTGGAAACTTAGAGGTCTTCCCATCAAAGGGAGATTTTATGATGAAACTATTCCTTGTTGTGAGGAATTGTTGAGACCATGCAACGAAGATGGCCATCTACCCAAGAGTTGTAGATATCTTTTTGATGCCCATCATCGTATTGCATCCCAGCAAATGGAGAGACAAAAAATTTCTACTCACCTGTGGATTTCCTTTTGGTTTAAAGGTGATTCGAAATACGCCAAGCCTCCTTCTCATAGGCCAAAGAAATCTTCTCGACCTCGTTCAACGCATAATCCAGATGGGTCTATCACCCAGCCAAGCGACTGGTCTGACGAAGAACAAGAGTTGTTTCAAGATCTTGGCGTAGAAGAAGGATGGAAAGAACGAACGTATCCAGCCACCTTTCATTCCTGTTAGTTGTGTGTTTTTGTGTTTCCTTACAAGAACGTGGATTTTCTTCGCTCCGGTGTATTTAAAGTTGCGAGCATAATGGCCGAGGTTGCTATTTTCAATCTTGCAATCCCAGTTTTATTCAACATTTATCACGGACTCGGCCAAATTTTCAATACGCCACATTCAACTGGACGTTCTGATATTTGTTTTCCTATTCATTATGTTTACGGCTGGCTAGCACATTATTTTGGCACCCATTTTAAACTGCATACGCCAATAAGGGGTCCCCTGATGGTTGACTATTATGGTGAAGGTGGTGCAAAATACTTCAACAGTCTTGAAGCTCGCAAGCTAATTCATCAAGGCACCTCTATAATATGGCATGCCAGTCTTCCCTCTAGGAATGATAAAACCGAAATTTTGGAAGACGTTAAGGGTTTATCATTTTCATCTACTTCATACTTTATAAGCCTCCGATCTTGCTATTTGTCTTCTTGCCACAGAAACTTCATGACTATAGAAGCTTACAGCCCTTGTCGATTCAGTCGTCAATTTGGCTTTCACGAGGATGTACCAAATGACTTACATAATGATCCTCCCCCTGTTAGCCTTGAGAATGTTTTTCATTCTTGGAGAATCTATACTGCAACTTTGACTTTGTCGAAGGTATACCTCCCAACGTGACTACTAGATCCTCGTGATCAATCCACTCGATCTTATGATAAGTGTTGGTCGCAAAAACATGGGCGTTACTTGGAGGAAGGCATACAACTTTTAATGAATAGTCTTACTATTCCTCCAACTAAGCCCAAACCTCATAAAGATCTGAATGCCAAAAAAGCTCGTAAGAGGGTGATTGAGGCGTCAACTCGTCCGATGAACAACCTTCGTGACGAAGAAGAAAGTCATAGTAGCAATGGCGATCGCCATTGGAAAAGGCCAAAAAAGGTAAAGAAATCATCCAGCGATCAATCTTCGGTTGACAACCCATCCCCCTTTCTTTTTTTACACACATGCTACGGTTTTATTTACTTACTTTTGTATCCCCTTACTTTGCAGGTACCTTTGGAGGACCAATCATTAACGAGTCCCAACGCTTTTGCTTCTACCTTTAAGAATATTGGCTCCGTGTCAAAAAGCAAAGAAGTCATAATTTCGTATCCTCCCCCCACTGGCAAGAATCCTCAACAAACCGAGGGAAAAAAGCTATTCCAGCACCCGAAGTTTCTTATTTTTGTGCCGACAACGTAATCTCTAACTTCAGGCGACAAGCTGCTTTGTCCATGTGGAAAAGCATTCACGGGAAGATCGTACGTACCTCTTTTGAACACATTGGTGACCTTGAGCAGGAGACGCTGAAAATATTTGGTGCAATGGCCGAAGCTAGCACAAATAACTTGGCGCCTCTGCAAGAGTTTGTCGACGGCTACTTCTAG

mRNA sequence

GAAATTCAGGCTGATCATTCTCTCACTTCTGTTTCCTCGGGCAGTGATCATCTCCTGATTCAGGCGGAATTTGAGCTGGTCACTTGCCCTTCACATCTTGCCTCGAGTAGTGATCAACCCCTGATTCAGGCAGAATTCAGGCTGATCACTCGCCCTTCACATCTTGCCTCGGGCAGTGATCAACCCCTGATTCAGGCGGAATTCAGGTTGATCACTCCTCCTTCACATCCTGCCTCGGGTAGTGATCAACCCTTGATTCAGGTGAAATTCAGGCTGATCACTCGTTCTTCATATCTTGCCTCAGGCAGTGATCAACCCCTGATTCAGGCGGAATTCAGGTTGATCACTCGCCCTTTACATCCTGCTTCGGGCAGTGATCAACCCCTGATTCAGGCTGATCACTCGAACATGGTGCATTTCACAGAGCTTTCAGATGATGGGAAGAAAAGTCTGGTTGTTCTACTAGACAAAGATCAACCTATCAAAAGTGGGACCATTCTTCCAATAGAGACTTCAATTACAGATCTTGAAGCTCGCAAGCTAATTCATCAAGGCACCTCTATAATATGGCATGCCAGTCTTCCCTCTAGGAATGATAAAACCGAAATTTTGGAAGACGTTAAGGGTTTATCATTTTCATCTACTTCATACTTTATAAGCCTCCGATCTTGCTATTTGTCTTCTTGCCACAGAAACTTCATGACTATAGAAGCTTACAGCCCTTGTCGATTCAGTCGTCAATTTGGCTTTCACGAGGATGTACCAAATGACTTACATAATGATCCTCCCCCTGTTAGCCTTGAGAATGTTTTTCATTCTTGGAGAATCTATACTGCAACTTTGACTTTGTCGAAGGTATACCTCCCAACTCTTACTATTCCTCCAACTAAGCCCAAACCTCATAAAGATCTGAATGCCAAAAAAGCTCGTAAGAGGGTGATTGAGGCGTCAACTCGTCCGATGAACAACCTTCGTGACGAAGAAGAAAGTCATAGTAGCAATGGCGATCGCCATTGGAAAAGGCCAAAAAAGGTACCTTTGGAGGACCAATCATTAACGAGTCCCAACGCTTTTGCTTCTACCTTTAAGAATATTGGCTCCGTGTCAAAAAGCAAAGAAGTCATAATTTCGCGACAAGCTGCTTTGTCCATGTGGAAAAGCATTCACGGGAAGATCGTACGTACCTCTTTTGAACACATTGGTGACCTTGAGCAGGAGACGCTGAAAATATTTGGTGCAATGGCCGAAGCTAGCACAAATAACTTGGCGCCTCTGCAAGAGTTTGTCGACGGCTACTTCTAG

Coding sequence (CDS)

GAAATTCAGGCTGATCATTCTCTCACTTCTGTTTCCTCGGGCAGTGATCATCTCCTGATTCAGGCGGAATTTGAGCTGGTCACTTGCCCTTCACATCTTGCCTCGAGTAGTGATCAACCCCTGATTCAGGCAGAATTCAGGCTGATCACTCGCCCTTCACATCTTGCCTCGGGCAGTGATCAACCCCTGATTCAGGCGGAATTCAGGTTGATCACTCCTCCTTCACATCCTGCCTCGGGTAGTGATCAACCCTTGATTCAGGTGAAATTCAGGCTGATCACTCGTTCTTCATATCTTGCCTCAGGCAGTGATCAACCCCTGATTCAGGCGGAATTCAGGTTGATCACTCGCCCTTTACATCCTGCTTCGGGCAGTGATCAACCCCTGATTCAGGCTGATCACTCGAACATGGTGCATTTCACAGAGCTTTCAGATGATGGGAAGAAAAGTCTGGTTGTTCTACTAGACAAAGATCAACCTATCAAAAGTGGGACCATTCTTCCAATAGAGACTTCAATTACAGATCTTGAAGCTCGCAAGCTAATTCATCAAGGCACCTCTATAATATGGCATGCCAGTCTTCCCTCTAGGAATGATAAAACCGAAATTTTGGAAGACGTTAAGGGTTTATCATTTTCATCTACTTCATACTTTATAAGCCTCCGATCTTGCTATTTGTCTTCTTGCCACAGAAACTTCATGACTATAGAAGCTTACAGCCCTTGTCGATTCAGTCGTCAATTTGGCTTTCACGAGGATGTACCAAATGACTTACATAATGATCCTCCCCCTGTTAGCCTTGAGAATGTTTTTCATTCTTGGAGAATCTATACTGCAACTTTGACTTTGTCGAAGGTATACCTCCCAACTCTTACTATTCCTCCAACTAAGCCCAAACCTCATAAAGATCTGAATGCCAAAAAAGCTCGTAAGAGGGTGATTGAGGCGTCAACTCGTCCGATGAACAACCTTCGTGACGAAGAAGAAAGTCATAGTAGCAATGGCGATCGCCATTGGAAAAGGCCAAAAAAGGTACCTTTGGAGGACCAATCATTAACGAGTCCCAACGCTTTTGCTTCTACCTTTAAGAATATTGGCTCCGTGTCAAAAAGCAAAGAAGTCATAATTTCGCGACAAGCTGCTTTGTCCATGTGGAAAAGCATTCACGGGAAGATCGTACGTACCTCTTTTGAACACATTGGTGACCTTGAGCAGGAGACGCTGAAAATATTTGGTGCAATGGCCGAAGCTAGCACAAATAACTTGGCGCCTCTGCAAGAGTTTGTCGACGGCTACTTCTAG

Protein sequence

EIQADHSLTSVSSGSDHLLIQAEFELVTCPSHLASSSDQPLIQAEFRLITRPSHLASGSDQPLIQAEFRLITPPSHPASGSDQPLIQVKFRLITRSSYLASGSDQPLIQAEFRLITRPLHPASGSDQPLIQADHSNMVHFTELSDDGKKSLVVLLDKDQPIKSGTILPIETSITDLEARKLIHQGTSIIWHASLPSRNDKTEILEDVKGLSFSSTSYFISLRSCYLSSCHRNFMTIEAYSPCRFSRQFGFHEDVPNDLHNDPPPVSLENVFHSWRIYTATLTLSKVYLPTLTIPPTKPKPHKDLNAKKARKRVIEASTRPMNNLRDEEESHSSNGDRHWKRPKKVPLEDQSLTSPNAFASTFKNIGSVSKSKEVIISRQAALSMWKSIHGKIVRTSFEHIGDLEQETLKIFGAMAEASTNNLAPLQEFVDGYF

Homology

[Close]

BLAST of Spg037661 vs. NCBI nr
Match: TYK08186.1 (hypothetical protein E5676_scaffold886G00810 [Cucumis melo var. makuwa])

HSP 1 Score: 144.1 bits (362), Expect = 2.9e-30
Identity = 104/295 (35.25%), Postives = 150/295 (50.85%), Query Frame = 0


Query: 175 DLEARKLIHQGTSIIWHASLPSRNDKTEILEDVKGLSFSSTSYFISLRSCYLSSCHRNFM 234
           + EAR+LIH G  I WHA+L +RN K E + D    SF  TSYF+S+ + YLSS  +N  
Sbjct: 317 EYEARELIHNGARIQWHANLQNRN-KHERMVDTHDSSFLQTSYFVSMCASYLSSRCKNTW 376

Query: 235 TIEAYSPCRFSRQFGFHEDVPNDLHNDPPPVSLENVFHSWRIYTATLTLSKVYLPTLTIP 294
            I +YSP RF RQFGF++D+PND+   PP ++L+N+ + WRI T   TLS++YLP  ++ 
Sbjct: 377 IITSYSPYRFGRQFGFYQDIPNDIGAMPPAITLDNILYHWRICTRRNTLSELYLPARSLE 436

Query: 295 P---TKPKPHKDLNAKKARKRVIEASTRPMNNLRDE-----EESHSSNGDRHWKRPKK-- 354
           P   T  +P +    K+   R++EA      NL +E      ES SS  DRHWKRP K  
Sbjct: 437 PCKHTTQEPREQPGGKEI--RLVEAMA---PNLEEEVKVHKNESDSSKSDRHWKRPLKKA 496

Query: 355 -----------------------VPL-----------EDQSLTSPNAFASTFKNIGSVSK 414
                                   PL            D+SLT P+A  S F+ +G    
Sbjct: 497 KVSGDNPDGRGLSALGVPDVPPLSPLNDHLEGLIELDSDESLTGPHAVDSAFEEVG---- 556

Query: 415 SKEVIISRQAALSMWKSIHGKIVRTSFEHIG--DLEQETLKIFGAMAEASTNNLA 424
           + +  +++    S+  S H + +R     +G  DLE  + K  GA  +AS   ++
Sbjct: 557 TSKTPVNKSVEQSLRLSAHLEEIRQGKMIVGAKDLESPSFK-EGACPKASLQKVS 600

[Close]

BLAST of Spg037661 vs. NCBI nr
Match: KAA0053466.1 (hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 137.5 bits (345), Expect = 2.7e-28
Identity = 102/324 (31.48%), Postives = 150/324 (46.30%), Query Frame = 0


Query: 175 DLEARKLIHQGTSIIWHASLPSRNDKTEILEDVKGLSFSSTSYFISLRSCYLSSCHRNFM 234
           + EAR+LIH G  I WHA+L +RN K E + D    SF   SYF+S+RSCYLSS   N  
Sbjct: 433 EYEARELIHNGVRIQWHANLHNRN-KHERMVDTHDSSFLQMSYFVSMRSCYLSSRCENTW 492

Query: 235 TIEAYSPCRFSRQFGFHEDVPNDLHNDPPPVSLENVFHSWRIYTATLTLSKVYLPTLTI- 294
            I +YSP RF RQFGF++D+PND+   PP ++L+N+ + WRI     TLS++YLP  ++ 
Sbjct: 493 IITSYSPYRFGRQFGFYQDLPNDIGGMPPAITLDNILYHWRICMRRNTLSELYLPVRSLE 552

Query: 295 ----------------------------------PPTKPKPHKDLNAKKARK--RVIEAS 354
                                             PP++P+  K+  +    K  R++EA 
Sbjct: 553 PCKHVTQRFTDWWTTKHMNYFEDNRHHLVSSAIPPPSQPRLPKNRGSNLGGKEIRLVEAM 612

Query: 355 TRPMNNLRDEEESHSSNGDRHWKRPKK--------------------------------- 414
              + +  +E ES S+  DRHWKRP K                                 
Sbjct: 613 APNLEDEVNEHESDSNKSDRHWKRPLKKAKVSGDHPDGRGLSALEVPDVPPLSPLNDHLE 672

Query: 415 ---VPLEDQSLTSPNAFASTFKNIGSVSKSKEVIISRQAALSMWKSIHGKIVRTSFEHIG 424
               P  D+SLT P+A  S F+ +G    +    +++ A  S+  S   + +R     +G
Sbjct: 673 GLIEPDSDESLTGPHAVDSAFEEVG----TSRTPVNKPAEQSLRPSTLLEEIRRGKMTVG 732

[Close]

BLAST of Spg037661 vs. NCBI nr
Match: ADN34118.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 136.0 bits (341), Expect = 7.9e-28
Identity = 97/295 (32.88%), Postives = 142/295 (48.14%), Query Frame = 0


Query: 175 DLEARKLIHQGTSIIWHASLPSRNDKTEILEDVKGLSFSSTSYFISLRSCYLSSCHRNFM 234
           + EAR+LIH G  I WHA+L +R+ K E + D    SF   SYF+S+RSCYLSS   N  
Sbjct: 166 EYEARELIHNGARIQWHANLQNRS-KHERMVDTHDSSFLQMSYFVSMRSCYLSSRCENTW 225

Query: 235 TIEAYSPCRFSRQFGFHEDVPNDLHNDPPPVSLENVFHSWRIYTATLTLSKVYLPTLTI- 294
            I +YSP R  RQFGF++D+PND+   PP ++L+N+ + WRI T   TL ++YLP  ++ 
Sbjct: 226 IITSYSPYRLGRQFGFYQDLPNDIGGMPPAITLDNILYHWRICTRRYTLFELYLPVRSLE 285

Query: 295 ----------------------------------PPTKPKPHKDLNAKKARKRV--IEAS 354
                                             PP++P+  K+  +    K +  +EA 
Sbjct: 286 PCKHVTQRFTDWWTTKHMTYFEDNRHHLVSSAISPPSQPRLPKNRGSNLGGKEIGLVEAM 345

Query: 355 TRPMNNLRDE-----EESHSSNGDRHWKRPKK----------------VPLEDQSLTSPN 410
                NL +E     +ES SS  DRHWKRP K                 P  D+SLT P+
Sbjct: 346 A---PNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPDWFARLIEPDSDESLTGPH 405

[Close]

BLAST of Spg037661 vs. NCBI nr
Match: XP_031739998.1 (uncharacterized protein LOC116403342 [Cucumis sativus] >XP_031745415.1 uncharacterized protein LOC105434487 [Cucumis sativus])

HSP 1 Score: 135.6 bits (340), Expect = 1.0e-27
Identity = 123/412 (29.85%), Postives = 172/412 (41.75%), Query Frame = 0


Query: 174 TDLEARKLIHQGTSIIWHASLPSRNDKTEILEDVKGLSFSSTSYFISLRSCYLSSCHRNF 233
           T+LEAR  IH+G  + WHA LP++N K E+L D   L   + S+FIS+RSC+LSS   + 
Sbjct: 14  TNLEARTHIHKGKYVSWHACLPTKN-KDELLTDDGELISWNASFFISIRSCFLSSQCGSS 73

Query: 234 MTIEAYSPCRFSRQFGFHEDVPNDLHNDPPPVSLENVFHSWRIYTATLTLSKVYLPTL-- 293
             IE YSPCRFSRQFGF++DVP DL  + P  +  NV + W I     TLS+VYLP    
Sbjct: 74  TVIEPYSPCRFSRQFGFYQDVPYDLGEEIPEANFFNVRYCWMICIRENTLSQVYLPVSAP 133

Query: 294 ---------------------------------TIPPTKPKPHKDLN-----------AK 353
                                            T P  K K  K +            + 
Sbjct: 134 NPDTHVTSHYKVWWLAKHGDYLQEGVQHLIDRPTPPHIKSKTTKKIEHNFGSGNQKICSD 193

Query: 354 KARKRVIE----ASTRPMNNL-------------------------------RDEEESHS 413
           +  +R++E     + R ++NL                               +  E+S S
Sbjct: 194 ETDERLVEKIEGGTKRLVDNLSLSTRFKHLIKGGIDNVGKDNRLSIATKHPSKRIEDSQS 253

Query: 414 SNGDRHWKRPKK------------------------------VP-LEDQSLTSPNA---- 434
           SN DRHWKRPKK                              +P LED ++  PN     
Sbjct: 254 SNDDRHWKRPKKPNKQSIDDEESPIRSSLGDHDLHIEDTLESMPNLEDCNIVLPNLEDCN 313

[Close]

BLAST of Spg037661 vs. NCBI nr
Match: TYK06433.1 (hypothetical protein E5676_scaffold163G001360 [Cucumis melo var. makuwa])

HSP 1 Score: 134.8 bits (338), Expect = 1.8e-27
Identity = 97/295 (32.88%), Postives = 143/295 (48.47%), Query Frame = 0


Query: 175 DLEARKLIHQGTSIIWHASLPSRNDKTEILEDVKGLSFSSTSYFISLRSCYLSSCHRNFM 234
           + EAR+LIH G  I WHA+L +R+ K E + D    SF   SYF+S+RSCYLSS   N  
Sbjct: 448 EYEARELIHNGARIQWHANLQNRS-KHERMVDTHDSSFLQMSYFVSMRSCYLSSRCENTW 507

Query: 235 TIEAYSPCRFSRQFGFHEDVPNDLHNDPPPVSLENVFHSWRIYTATLTLSKVYLPTLTI- 294
            I +YSP RF RQFGF++D+PND+   PP ++L+N+ + WRI T   TL ++YL   ++ 
Sbjct: 508 IITSYSPYRFGRQFGFYQDLPNDIGGMPPAITLDNILYHWRICTRRNTLFELYLSVRSLE 567

Query: 295 ----------------------------------PPTKPKPHKDLNAKKARKRV--IEAS 354
                                             PP++P+  K+  +    K++  +EA 
Sbjct: 568 PCKHVTQRFTDWWTTKHMTYFEDNRHHLVSSAISPPSQPRLPKNRGSNLGGKKIGLVEAM 627

Query: 355 TRPMNNLRDE-----EESHSSNGDRHWKRPKK----------------VPLEDQSLTSPN 410
                NL +E     +ES SS  DRHWKRP K                 P  D+SLT P+
Sbjct: 628 A---PNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPDWFARLIEPDSDESLTGPH 687

[Close]

BLAST of Spg037661 vs. ExPASy TrEMBL
Match: A0A5D3CCU5 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00810 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.4e-30
Identity = 104/295 (35.25%), Postives = 150/295 (50.85%), Query Frame = 0


Query: 175 DLEARKLIHQGTSIIWHASLPSRNDKTEILEDVKGLSFSSTSYFISLRSCYLSSCHRNFM 234
           + EAR+LIH G  I WHA+L +RN K E + D    SF  TSYF+S+ + YLSS  +N  
Sbjct: 317 EYEARELIHNGARIQWHANLQNRN-KHERMVDTHDSSFLQTSYFVSMCASYLSSRCKNTW 376

Query: 235 TIEAYSPCRFSRQFGFHEDVPNDLHNDPPPVSLENVFHSWRIYTATLTLSKVYLPTLTIP 294
            I +YSP RF RQFGF++D+PND+   PP ++L+N+ + WRI T   TLS++YLP  ++ 
Sbjct: 377 IITSYSPYRFGRQFGFYQDIPNDIGAMPPAITLDNILYHWRICTRRNTLSELYLPARSLE 436

Query: 295 P---TKPKPHKDLNAKKARKRVIEASTRPMNNLRDE-----EESHSSNGDRHWKRPKK-- 354
           P   T  +P +    K+   R++EA      NL +E      ES SS  DRHWKRP K  
Sbjct: 437 PCKHTTQEPREQPGGKEI--RLVEAMA---PNLEEEVKVHKNESDSSKSDRHWKRPLKKA 496

Query: 355 -----------------------VPL-----------EDQSLTSPNAFASTFKNIGSVSK 414
                                   PL            D+SLT P+A  S F+ +G    
Sbjct: 497 KVSGDNPDGRGLSALGVPDVPPLSPLNDHLEGLIELDSDESLTGPHAVDSAFEEVG---- 556

Query: 415 SKEVIISRQAALSMWKSIHGKIVRTSFEHIG--DLEQETLKIFGAMAEASTNNLA 424
           + +  +++    S+  S H + +R     +G  DLE  + K  GA  +AS   ++
Sbjct: 557 TSKTPVNKSVEQSLRLSAHLEEIRQGKMIVGAKDLESPSFK-EGACPKASLQKVS 600

[Close]

BLAST of Spg037661 vs. ExPASy TrEMBL
Match: A0A5A7UGW6 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold190G00140 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.3e-28
Identity = 102/324 (31.48%), Postives = 150/324 (46.30%), Query Frame = 0


Query: 175 DLEARKLIHQGTSIIWHASLPSRNDKTEILEDVKGLSFSSTSYFISLRSCYLSSCHRNFM 234
           + EAR+LIH G  I WHA+L +RN K E + D    SF   SYF+S+RSCYLSS   N  
Sbjct: 433 EYEARELIHNGVRIQWHANLHNRN-KHERMVDTHDSSFLQMSYFVSMRSCYLSSRCENTW 492

Query: 235 TIEAYSPCRFSRQFGFHEDVPNDLHNDPPPVSLENVFHSWRIYTATLTLSKVYLPTLTI- 294
            I +YSP RF RQFGF++D+PND+   PP ++L+N+ + WRI     TLS++YLP  ++ 
Sbjct: 493 IITSYSPYRFGRQFGFYQDLPNDIGGMPPAITLDNILYHWRICMRRNTLSELYLPVRSLE 552

Query: 295 ----------------------------------PPTKPKPHKDLNAKKARK--RVIEAS 354
                                             PP++P+  K+  +    K  R++EA 
Sbjct: 553 PCKHVTQRFTDWWTTKHMNYFEDNRHHLVSSAIPPPSQPRLPKNRGSNLGGKEIRLVEAM 612

Query: 355 TRPMNNLRDEEESHSSNGDRHWKRPKK--------------------------------- 414
              + +  +E ES S+  DRHWKRP K                                 
Sbjct: 613 APNLEDEVNEHESDSNKSDRHWKRPLKKAKVSGDHPDGRGLSALEVPDVPPLSPLNDHLE 672

Query: 415 ---VPLEDQSLTSPNAFASTFKNIGSVSKSKEVIISRQAALSMWKSIHGKIVRTSFEHIG 424
               P  D+SLT P+A  S F+ +G    +    +++ A  S+  S   + +R     +G
Sbjct: 673 GLIEPDSDESLTGPHAVDSAFEEVG----TSRTPVNKPAEQSLRPSTLLEEIRRGKMTVG 732

[Close]

BLAST of Spg037661 vs. ExPASy TrEMBL
Match: E5GCB9 (PMD domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.8e-28
Identity = 97/295 (32.88%), Postives = 142/295 (48.14%), Query Frame = 0


Query: 175 DLEARKLIHQGTSIIWHASLPSRNDKTEILEDVKGLSFSSTSYFISLRSCYLSSCHRNFM 234
           + EAR+LIH G  I WHA+L +R+ K E + D    SF   SYF+S+RSCYLSS   N  
Sbjct: 166 EYEARELIHNGARIQWHANLQNRS-KHERMVDTHDSSFLQMSYFVSMRSCYLSSRCENTW 225

Query: 235 TIEAYSPCRFSRQFGFHEDVPNDLHNDPPPVSLENVFHSWRIYTATLTLSKVYLPTLTI- 294
            I +YSP R  RQFGF++D+PND+   PP ++L+N+ + WRI T   TL ++YLP  ++ 
Sbjct: 226 IITSYSPYRLGRQFGFYQDLPNDIGGMPPAITLDNILYHWRICTRRYTLFELYLPVRSLE 285

Query: 295 ----------------------------------PPTKPKPHKDLNAKKARKRV--IEAS 354
                                             PP++P+  K+  +    K +  +EA 
Sbjct: 286 PCKHVTQRFTDWWTTKHMTYFEDNRHHLVSSAISPPSQPRLPKNRGSNLGGKEIGLVEAM 345

Query: 355 TRPMNNLRDE-----EESHSSNGDRHWKRPKK----------------VPLEDQSLTSPN 410
                NL +E     +ES SS  DRHWKRP K                 P  D+SLT P+
Sbjct: 346 A---PNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPDWFARLIEPDSDESLTGPH 405

[Close]

BLAST of Spg037661 vs. ExPASy TrEMBL
Match: A0A5D3C3D7 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001360 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 8.6e-28
Identity = 97/295 (32.88%), Postives = 143/295 (48.47%), Query Frame = 0


Query: 175 DLEARKLIHQGTSIIWHASLPSRNDKTEILEDVKGLSFSSTSYFISLRSCYLSSCHRNFM 234
           + EAR+LIH G  I WHA+L +R+ K E + D    SF   SYF+S+RSCYLSS   N  
Sbjct: 448 EYEARELIHNGARIQWHANLQNRS-KHERMVDTHDSSFLQMSYFVSMRSCYLSSRCENTW 507

Query: 235 TIEAYSPCRFSRQFGFHEDVPNDLHNDPPPVSLENVFHSWRIYTATLTLSKVYLPTLTI- 294
            I +YSP RF RQFGF++D+PND+   PP ++L+N+ + WRI T   TL ++YL   ++ 
Sbjct: 508 IITSYSPYRFGRQFGFYQDLPNDIGGMPPAITLDNILYHWRICTRRNTLFELYLSVRSLE 567

Query: 295 ----------------------------------PPTKPKPHKDLNAKKARKRV--IEAS 354
                                             PP++P+  K+  +    K++  +EA 
Sbjct: 568 PCKHVTQRFTDWWTTKHMTYFEDNRHHLVSSAISPPSQPRLPKNRGSNLGGKKIGLVEAM 627

Query: 355 TRPMNNLRDE-----EESHSSNGDRHWKRPKK----------------VPLEDQSLTSPN 410
                NL +E     +ES SS  DRHWKRP K                 P  D+SLT P+
Sbjct: 628 A---PNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPDWFARLIEPDSDESLTGPH 687

[Close]

BLAST of Spg037661 vs. ExPASy TrEMBL
Match: A0A5A7TX42 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00950 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 9.5e-27
Identity = 92/268 (34.33%), Postives = 124/268 (46.27%), Query Frame = 0


Query: 175 DLEARKLIHQGTSIIWHASLPSRNDKTEILEDVKGLSFSSTSYFISLRSCYLSSCHRNFM 234
           + EAR+LIH G  I WHASL +R+ K E + D    SF  TSYF+S+RSCYLSS   N  
Sbjct: 399 EYEARELIHNGARIQWHASLQNRS-KHERMVDTHDSSFLQTSYFVSMRSCYLSSRCENTW 458

Query: 235 TIEAYSPCRFSRQFGFHEDVPNDLHNDPPPVSLENVFHSWRIYTATLTLSKVYLPTLTIP 294
            I +YSP RF RQFGF++D+PND+    P ++L+N+ + WRI T   TLS++YLP  ++ 
Sbjct: 459 IITSYSPYRFGRQFGFYQDLPNDIGGMSPAITLDNILYHWRICTRRNTLSELYLPARSLE 518

Query: 295 P-------------TKPKPHKDLNAKKARKRVIEASTRP--------------------- 354
           P             TK   + + N        I  S++P                     
Sbjct: 519 PCKHVTQRFTDWWTTKHGTYFEDNRHHLVSSAIPPSSQPRLPKNRGSNLGGKEIRLVEAM 578

Query: 355 MNNLRDE-----EESHSSNGDRHWKRPKK------------------------------- 368
             NL +E     +ES SS  DRHWKRP K                               
Sbjct: 579 APNLEEEVKERKDESDSSKSDRHWKRPLKKAKVSGDHPDGRGLSALEVPDVPPLSPLNDH 638

The following BLAST results are available for this feature:

BLAST of Spg037661 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK08186.1	2.9e-30	35.25	hypothetical protein E5676_scaffold886G00810 [Cucumis melo var. makuwa]	[more]
KAA0053466.1	2.7e-28	31.48	hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]	[more]
ADN34118.1	7.9e-28	32.88	hypothetical protein [Cucumis melo subsp. melo]	[more]
XP_031739998.1	1.0e-27	29.85	uncharacterized protein LOC116403342 [Cucumis sativus] >XP_031745415.1 uncharact...	[more]
TYK06433.1	1.8e-27	32.88	hypothetical protein E5676_scaffold163G001360 [Cucumis melo var. makuwa]	[more]

BLAST of Spg037661 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg037661 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CCU5	1.4e-30	35.25	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7UGW6	1.3e-28	31.48	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
E5GCB9	3.8e-28	32.88	PMD domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A5D3C3D7	8.6e-28	32.88	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7TX42	9.5e-27	34.33	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Spg037661 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 318..347
None	No IPR available	PANTHER	PTHR36607	1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4	coord: 177..397

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg037661.1	Spg037661.1	mRNA