Spg037574 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg037574
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionULP_PROTEASE domain-containing protein
Locationscaffold11: 33482279 .. 33482865 (-)
RNA-Seq ExpressionSpg037574
SyntenySpg037574
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGATCGCGATCCAGCCTCGGGAAAACACTGTGTATATATTGAATTCTTTGCGCAGTAAAGTTGAAGAAGAGTTTAGTGGAACTATAAATACGTAAGTGTGTCTCAAATTTTTGTAGTGTTTAAAAGGAAAAATAAAACTTGAATTGTTCTAATGTTTTAAATTATTTAGGGGGTTGAGAATGTGGCAAGCTAAGCACTCACTTCCTCAATATCGATCTGCTATTAGTTGGAAACTAGTGAAGGTAAATTCACATTCATGATATTATAGACATTGAAATCTTGTATGCAGACTCAAGTATGTTCTTTTTCATTGTAATGCCCTCATCAATTAGGTTCGACAGAGTGTGGGTATTTTGTGCAAAAATATATAAGAGAAATAATGCACAACTCTACTACCCCTATAACTAAACTTGTAAGTATTATCACTATCCTTACATGTTATTATAATTTATGTTTCTTTTCATTCTTTTGTCATGTAATTGTTTTTGTTTTGTTGTAGTTTAACACAAAGAATGCATTTACACAAGACGAGATCGACGAGGTTCGTATAGAATGGGCAAATTTTGTTGGAGGATTTGTGTAA

mRNA sequence

ATGTTGATCGCGATCCAGCCTCGGGAAAACACTGTGTATATATTGAATTCTTTGCGCAGTAAAGTTGAAGAAGAGTTTAGTGGAACTATAAATACGGGGTTGAGAATGTGGCAAGCTAAGCACTCACTTCCTCAATATCGATCTGCTATTAGTTGGAAACTAGTGAAGTTTAACACAAAGAATGCATTTACACAAGACGAGATCGACGAGGTTCGTATAGAATGGGCAAATTTTGTTGGAGGATTTGTGTAA

Coding sequence (CDS)

ATGTTGATCGCGATCCAGCCTCGGGAAAACACTGTGTATATATTGAATTCTTTGCGCAGTAAAGTTGAAGAAGAGTTTAGTGGAACTATAAATACGGGGTTGAGAATGTGGCAAGCTAAGCACTCACTTCCTCAATATCGATCTGCTATTAGTTGGAAACTAGTGAAGTTTAACACAAAGAATGCATTTACACAAGACGAGATCGACGAGGTTCGTATAGAATGGGCAAATTTTGTTGGAGGATTTGTGTAA

Protein sequence

MLIAIQPRENTVYILNSLRSKVEEEFSGTINTGLRMWQAKHSLPQYRSAISWKLVKFNTKNAFTQDEIDEVRIEWANFVGGFV
Homology
[Close]
BLAST of Spg037574 vs. NCBI nr
Match: XP_022136076.1 (uncharacterized protein LOC111007859 isoform X1 [Momordica charantia])

HSP 1 Score: 100.1 bits (248), Expect = 9.3e-18
Identity = 52/115 (45.22%), Postives = 67/115 (58.26%), Query Frame = 0 

Query: 1   MLIAIQPRENTVYILNSLRSKVEEEFSGTINTGLRMWQAKHSLPQYRSAISWKLVK---- 60
           MLI I  REN VY+L+SLR K++E++   INT L++WQAKHS+ +YR+   WK +K    
Sbjct: 552 MLIIINLRENCVYVLDSLRRKIQEDYQRVINTSLKIWQAKHSIQRYRTNTIWKSIKCPCQ 611

Query: 61  ----------------------------FNTKNAFTQDEIDEVRIEWANFVGGFV 84
                                       FNTKNA+ Q+EIDEVRIEWA+FVGG V
Sbjct: 612 MGSVECGYYVQKYIREIVQNASTHISNIFNTKNAYQQEEIDEVRIEWADFVGGLV 666

[Close]
BLAST of Spg037574 vs. NCBI nr
Match: XP_022136077.1 (uncharacterized protein LOC111007859 isoform X2 [Momordica charantia])

HSP 1 Score: 100.1 bits (248), Expect = 9.3e-18
Identity = 52/115 (45.22%), Postives = 67/115 (58.26%), Query Frame = 0 

Query: 1   MLIAIQPRENTVYILNSLRSKVEEEFSGTINTGLRMWQAKHSLPQYRSAISWKLVK---- 60
           MLI I  REN VY+L+SLR K++E++   INT L++WQAKHS+ +YR+   WK +K    
Sbjct: 551 MLIIINLRENCVYVLDSLRRKIQEDYQRVINTSLKIWQAKHSIQRYRTNTIWKSIKCPCQ 610

Query: 61  ----------------------------FNTKNAFTQDEIDEVRIEWANFVGGFV 84
                                       FNTKNA+ Q+EIDEVRIEWA+FVGG V
Sbjct: 611 MGSVECGYYVQKYIREIVQNASTHISNIFNTKNAYQQEEIDEVRIEWADFVGGLV 665

[Close]
BLAST of Spg037574 vs. NCBI nr
Match: TYK21543.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 94.4 bits (233), Expect = 5.1e-16
Identity = 52/115 (45.22%), Postives = 62/115 (53.91%), Query Frame = 0 

Query: 1    MLIAIQPRENTVYILNSLRSKVEEEFSGTINTGLRMWQAKHSLPQYRSAISWKLVK---- 60
            ML  I  REN VY+L+SLRSKV E+  G IN GL+ WQAKH L +YRS   W+ VK    
Sbjct: 1415 MLHVIDLRENCVYVLDSLRSKVNEDIHGIINVGLKTWQAKHDLQRYRSTPKWRPVKCPRQ 1474

Query: 61   ----------------------------FNTKNAFTQDEIDEVRIEWANFVGGFV 84
                                        FNTKNA++Q+EIDE+R EWA FV  FV
Sbjct: 1475 LDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAYSQEEIDEIRTEWAAFVSRFV 1529

[Close]
BLAST of Spg037574 vs. NCBI nr
Match: TYJ97211.1 (uncharacterized protein E5676_scaffold92G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 94.4 bits (233), Expect = 5.1e-16
Identity = 52/115 (45.22%), Postives = 62/115 (53.91%), Query Frame = 0 

Query: 1   MLIAIQPRENTVYILNSLRSKVEEEFSGTINTGLRMWQAKHSLPQYRSAISWKLVK---- 60
           ML  I  REN VY+L+SLRSKV E+  G IN GL+ WQAKH L +YRS   W+ VK    
Sbjct: 691 MLHVIDLRENCVYVLDSLRSKVNEDIHGIINVGLKTWQAKHDLQRYRSTPKWRPVKCPRQ 750

Query: 61  ----------------------------FNTKNAFTQDEIDEVRIEWANFVGGFV 84
                                       FNTKNA++Q+EIDE+R EWA FV  FV
Sbjct: 751 LDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAYSQEEIDEIRTEWAAFVSRFV 805

[Close]
BLAST of Spg037574 vs. NCBI nr
Match: KAA0063045.1 (uncharacterized protein E6C27_scaffold468G001580 [Cucumis melo var. makuwa])

HSP 1 Score: 94.0 bits (232), Expect = 6.6e-16
Identity = 52/115 (45.22%), Postives = 61/115 (53.04%), Query Frame = 0 

Query: 1   MLIAIQPRENTVYILNSLRSKVEEEFSGTINTGLRMWQAKHSLPQYRSAISWKLVK---- 60
           ML  I  REN VY+L+SLRSKV E+  G IN GL+ WQAKH L +YRS   W+ VK    
Sbjct: 52  MLHVIDLRENYVYVLDSLRSKVNEDIHGIINVGLKTWQAKHDLQRYRSTPKWRPVKCPRQ 111

Query: 61  ----------------------------FNTKNAFTQDEIDEVRIEWANFVGGFV 84
                                       FNTKNA+ Q+EIDE+R EWA FV  FV
Sbjct: 112 LDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAYRQEEIDEIRTEWATFVSRFV 166

[Close]
BLAST of Spg037574 vs. ExPASy TrEMBL
Match: A0A6J1C2H7 (uncharacterized protein LOC111007859 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007859 PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.5e-18
Identity = 52/115 (45.22%), Postives = 67/115 (58.26%), Query Frame = 0 

Query: 1   MLIAIQPRENTVYILNSLRSKVEEEFSGTINTGLRMWQAKHSLPQYRSAISWKLVK---- 60
           MLI I  REN VY+L+SLR K++E++   INT L++WQAKHS+ +YR+   WK +K    
Sbjct: 552 MLIIINLRENCVYVLDSLRRKIQEDYQRVINTSLKIWQAKHSIQRYRTNTIWKSIKCPCQ 611

Query: 61  ----------------------------FNTKNAFTQDEIDEVRIEWANFVGGFV 84
                                       FNTKNA+ Q+EIDEVRIEWA+FVGG V
Sbjct: 612 MGSVECGYYVQKYIREIVQNASTHISNIFNTKNAYQQEEIDEVRIEWADFVGGLV 666

[Close]
BLAST of Spg037574 vs. ExPASy TrEMBL
Match: A0A6J1C4J7 (uncharacterized protein LOC111007859 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007859 PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.5e-18
Identity = 52/115 (45.22%), Postives = 67/115 (58.26%), Query Frame = 0 

Query: 1   MLIAIQPRENTVYILNSLRSKVEEEFSGTINTGLRMWQAKHSLPQYRSAISWKLVK---- 60
           MLI I  REN VY+L+SLR K++E++   INT L++WQAKHS+ +YR+   WK +K    
Sbjct: 551 MLIIINLRENCVYVLDSLRRKIQEDYQRVINTSLKIWQAKHSIQRYRTNTIWKSIKCPCQ 610

Query: 61  ----------------------------FNTKNAFTQDEIDEVRIEWANFVGGFV 84
                                       FNTKNA+ Q+EIDEVRIEWA+FVGG V
Sbjct: 611 MGSVECGYYVQKYIREIVQNASTHISNIFNTKNAYQQEEIDEVRIEWADFVGGLV 665

[Close]
BLAST of Spg037574 vs. ExPASy TrEMBL
Match: A0A5D3BF14 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold92G00020 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.5e-16
Identity = 52/115 (45.22%), Postives = 62/115 (53.91%), Query Frame = 0 

Query: 1   MLIAIQPRENTVYILNSLRSKVEEEFSGTINTGLRMWQAKHSLPQYRSAISWKLVK---- 60
           ML  I  REN VY+L+SLRSKV E+  G IN GL+ WQAKH L +YRS   W+ VK    
Sbjct: 691 MLHVIDLRENCVYVLDSLRSKVNEDIHGIINVGLKTWQAKHDLQRYRSTPKWRPVKCPRQ 750

Query: 61  ----------------------------FNTKNAFTQDEIDEVRIEWANFVGGFV 84
                                       FNTKNA++Q+EIDE+R EWA FV  FV
Sbjct: 751 LDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAYSQEEIDEIRTEWAAFVSRFV 805

[Close]
BLAST of Spg037574 vs. ExPASy TrEMBL
Match: A0A5D3DD98 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold275G00290 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.5e-16
Identity = 52/115 (45.22%), Postives = 62/115 (53.91%), Query Frame = 0 

Query: 1    MLIAIQPRENTVYILNSLRSKVEEEFSGTINTGLRMWQAKHSLPQYRSAISWKLVK---- 60
            ML  I  REN VY+L+SLRSKV E+  G IN GL+ WQAKH L +YRS   W+ VK    
Sbjct: 1415 MLHVIDLRENCVYVLDSLRSKVNEDIHGIINVGLKTWQAKHDLQRYRSTPKWRPVKCPRQ 1474

Query: 61   ----------------------------FNTKNAFTQDEIDEVRIEWANFVGGFV 84
                                        FNTKNA++Q+EIDE+R EWA FV  FV
Sbjct: 1475 LDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAYSQEEIDEIRTEWAAFVSRFV 1529

[Close]
BLAST of Spg037574 vs. ExPASy TrEMBL
Match: A0A5A7VAW3 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G001580 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 3.2e-16
Identity = 52/115 (45.22%), Postives = 61/115 (53.04%), Query Frame = 0 

Query: 1   MLIAIQPRENTVYILNSLRSKVEEEFSGTINTGLRMWQAKHSLPQYRSAISWKLVK---- 60
           ML  I  REN VY+L+SLRSKV E+  G IN GL+ WQAKH L +YRS   W+ VK    
Sbjct: 52  MLHVIDLRENYVYVLDSLRSKVNEDIHGIINVGLKTWQAKHDLQRYRSTPKWRPVKCPRQ 111

Query: 61  ----------------------------FNTKNAFTQDEIDEVRIEWANFVGGFV 84
                                       FNTKNA+ Q+EIDE+R EWA FV  FV
Sbjct: 112 LDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAYRQEEIDEIRTEWATFVSRFV 166

The following BLAST results are available for this feature:
BLAST of Spg037574 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022136076.19.3e-1845.22uncharacterized protein LOC111007859 isoform X1 [Momordica charantia][more]
XP_022136077.19.3e-1845.22uncharacterized protein LOC111007859 isoform X2 [Momordica charantia][more]
TYK21543.15.1e-1645.22transposase [Cucumis melo var. makuwa][more]
TYJ97211.15.1e-1645.22uncharacterized protein E5676_scaffold92G00020 [Cucumis melo var. makuwa][more]
KAA0063045.16.6e-1645.22uncharacterized protein E6C27_scaffold468G001580 [Cucumis melo var. makuwa][more]
BLAST of Spg037574 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg037574 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1C2H74.5e-1845.22uncharacterized protein LOC111007859 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6J1C4J74.5e-1845.22uncharacterized protein LOC111007859 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A5D3BF142.5e-1645.22ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A5D3DD982.5e-1645.22Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold275G00290 PE... [more]
A0A5A7VAW33.2e-1645.22ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
BLAST of Spg037574 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg037574.1Spg037574.1mRNA