Spg037512 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg037512
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Actin-related protein 2/3 complex subunit 5
Location	scaffold11: 33518773 .. 33525278 (+)
RNA-Seq Expression	Spg037512
Synteny	Spg037512

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTCGTCCCTTCAACGATTCGGTAAGGTTCGACTTAAACCCACGCTATTTTTGCAAGTTTCAACATATATCCATTTGGTTTTGGACCTTGAAATCCCTTTAGATCGTGACCCATATTCTATCGACTTGAAGTTTTGATTACCCACTCCTTTGCAGCTTCCAACGATTTGGTTTAAGCTTCTTCGGACATCAATCAATGAGCTTTTGGACTCGAATCTAGTGTTCGACAATTACCCACAAGCTGAACAACGTTGATTCATATTGCCCAAAGCCCAATAGCTCTTGTTTGGCGATCTCGGACTCTGACAAGCATCAACCAGCATTAGTTCGAGCTCGTTTTGGGTAGTTCAGTAAGTTTCAGCAACCTTTCAAACTCATTCATAGCGTTTTGCAGTTTGATAGATTGATCCCTAATGCTTAGAAACTCTCCGTTTGTAGATTTGAGCTCCATCAAATACTTTTCAACGAAGGTCCAAGTCTCTTTCAGTGAGTTTGAGGCATTCAATTGGAGTAATTTAGAGTTGTCTCTAACCCTTGGCTATACTTTCAGTTGTAGTTTGGAATCAATTCAAAACACCTACGAACACTTCTAAGCAAGGATTCGAGTCCTTTGGTGAATTTTATTAGGTAAGCCACTCTTTAGTTCCATTCGAACTTGTTTAAGGTGTTTTAAAATAGTTTAAATGCTTTCAATATCAGTTGAAGTGTTTTAGATAAGCTTTTAATCCTTTGAAGTCTCCTTTCGTGCAGTTCCAAATCAAGTTGAACTCACTCGAACACGTTACAGCAAGCTTTGAGTCATTTTGGGTGAGTTTCAGGTGGTAAACTTCATCTAAGACCTTTTCGATCGCCTTGTTAGTGCTTTAGATCATTCTCGTACTCTTAGTAGCTCTTGGTTGTAGTTTCAGGCTAATTTGGGGTGTCCAAGCTAGCTATCTAAAGTTGTGTTTGGGTAAGAACACTCCTCCTAAACACCTCTTTGGCGTTGATAAAGGTTTGGAGTTGAGTTAGCTTTGAAACCTTTCCTCCCTTATTTCAGGAGCTCGTTATGTTCGCTTAGGGGCGTTTTAGCAATTAGTAAGTGGAATTCTACTTGTTGGGTCTTTTTGCTTGTGCTAGCATGCTGTGTGCTTTACTTGTTTGGTTTTATCATATACTGTATAGATATGTATGTGTTATGTGTTCGTGACGAGTTTTGAATACGTTGAGCTGTTGTGTTGAGCTTATATGGTGAAACTGTTGTGCTAAGAATGTTGTTTCGTTGTGATTGATTGAAAAGCGTTAATGTGTTGTTCATTTGATGTGTTTTATGACTTAATGCATGGTTTAGAAAGCATGTTTGGTATGTGCATTCTGGGTTGCATGTCATTGGCATAAAACATGGTTTAGAAGCATGATGAGTAAGATTCATGCATTCTAGTGAGATTGTGAGGTCAGTGGACCTTGTGTGTTGTAAAGGAAAGTTAGGTGAACACCAGGTGCTTCGGGTAAAAATGGTCAGAGGGGTGGTATGTCACCAATGGATTAAGAGAAGCATCGGGTGCCTTGGGTAATATGGTCAAGGGGCGATATGATGAGTCTAGAAAGAGAGTATTGAGCGTCGAGAAGGGCCAATACGTTGTGAAGTGTGCCTTGGGTAATATGGCCAAGGGACAATGCATAGTACGATTATTAAGTGATAGCCACATTGTGACGATGTCCTCCCGATTCCCGTAACGGTTTTTTCTCTACCCCAAATCGATCGGGTCCATTCAAAATCGGCTTAGTGGTTTGGTTTTCTATGATCACAAACCGATTCATGGGTTCAAACCGATACCAAACCCAATCGAGCTTCACCGATTGCCAAACACACTGTCTTTTTCTTTTTTGAAACTCCAAAGAATCGTGATTTCCTTTTTGTTTATAGATAAATCGACGACATCATGGACAGATTGCACTGATTTACGTTGAATTTCATTCATACAACTGTTGTATTATTGAATTGTATCGGTACAATCAGTTTTCGGTTAAGTTCGCGAAAATCCTACTGAAGATAGGGTGATAGCACAAGGCGAAAATGGCGACTACCGATGAATTTGTGGAAGCAGATAATGCAGAAGCCATAATCACCAGAATTGAGCACAAATCTCGAAAGATCGAGAGCTTACTTAAACAGTAATCAATACTCTACCTACTCTTTGATTATAGGATTTAAATTTATTCAGCTCCATCCCCTAACTTACTGAAAATGCCCCAATTTGTCATTTTTTGCTTCGTTAAGGTCTAAACCAATCGAAGCTCTTAAAACTGCACTTGAAGGTTCCCCTCCAAATACCCGAGATGAGCGCTGCAAGGTATCCTTTCTTTCTTTTCTTCTCTCTTTTTTACTGCCTATGATCAATTTGGTGATTTTTATTATTAGTATGATTTAATTTGTGGGTAATCCTACAAATTTTAAGGGAAATTACTGGGAAAAATCCCTGTTTTTCAGCTATCATTAATTCTAATTTTATTCTTTTCCTACATTTTCTCAATGATGAGGCAAATTAGAATTGCTGGATGCTGATATAACTGTTGGAAATAGTTTGTTGTATTTGTATGCAGCTATTCAAAATGAATAGGCTTGTTGTTTCTTTCATGTTTATGTTTTGTCGGTCTGCTTGACCTGGGAGGATGAGTAAATCTAATATGATTATTTGTACTTCTCCAGTCAGCAAATTGGATTGTGGTGCATAGGGCTCTCATGGCTATAAAGGATGTAGATGGGATGTTTTCTTCCTTGGATCCGGAGTACTATGATATTCTAATGAAGTGAGTTTATGTTATTTAACTGCTAAAATGTCAATTCTTATTGCTTCTACTTACTTCAGCAAGAGTCTAAAGTTGGTCATTCTACTAATTATATATATTTTTTCACTTTTTCCTTTAATTAAATTCCAAGTTTAGTTTCTTAGATTATGATTTTGCTATGAATTTTATATTCAAGTTGTGGGTCTGATCCTACTATGAGTTATGCTAACGAACATTCTGTTTTTGTTTCAAACTCATCAAATTTCTACAGCTAGATGTGTCCATGTCGATGCGGCATGTGTTAGTCTTTAGTTACATGGAAGATTGGTTGGCTGATGAATTTATTTTTGTCGCAAGGAGTCTTTGTAAAAGTGGAAATCTTCGTAACCATTTAGCTAGAAATATCTCATCACATTTTCTGAAGCTAGCAAGTCACATCCAACCTTTCTCCCAATAGCCCTTCCTTCTTTTTCCCAAATGTTGCTAATCTTTTCGGGATTCCAAACACCAAGAAGAGATAAGCGAGGATGCTTGACAACACTGATTAGGCAAATGTCAATCCTCCCCTTTGGAACAACAGGACTGTTTTCACGTGGATCTAATGACAGGGTTTCAAAAGCCAGTGGCCTTTATTGGCCTCCAAGCATAGGCCGCACGTGAATCATTCATGGGGAAGAAGTGGTATTTTGAGCCTATTTGCCTGTAGATCTACTACTTCTCAGTTTATGTTGATCCCTCCCAATTCAGTCTTCTCCCAAATGATCATTAAACCTTAGGTTTACTTTTCTTTTCTTTATTATTTTTTTTTGTAAAAGATAAGAAACTTCTTTTTTTTTTTTTTGGATAAATAAGAAACAAAATTTGTTGATGTATGAAATTACAAAACGTAGGGAGAGGAGAAAGGAAGTTATAAGAAAATCTGCAAGTAGTAAAAATCACTCTCTCAATGAAGAATCAAAAGGGAGGTTTTCTCTTCTGAGTATACGTTTGTTCCTCTTGAGTCGAAAAAGAAAAAAAGAAAACAATTCATGAGAACTCATAACACTTGCTTTTTTTCTTTTTAAAAAGGATTCACCAAGAGAGAAAATTAGAAACCCCCCTTAATATTTTGAAGGAATAGCTAGAAACCAGCCAAGAGAACTAAACGAGAAAGCCTGCATTTCAAGCATGGTTGCAATGAGGAATAAGACGATCTTTGTTTTCTTCTTACAAGCACTTGGCGTACCAACTTGGTGAAGGGGAGGATTAGGGTTTCAAGCTTGGACTTTTATCTTGGGTACTAATACCACCATGGAGAAGCTCTCACATCATCCAGGAGAGTGGGGAAACTTTGTGGGAGTCATTGAGACATTTCATAGTGAAAGTTCTGAGACCAGAAACCATCCCTATTTTCCGAAGAGAAACCATTTAGAAGATCTTAAAACTAGCACCATGTTTACCTCCAAAGGGTGGTTCTTTCAGTAGAGTTTCTCCGAAGCCACTTGGCCATGAATGTGATATTTCTTCCCTAGAGATTACTAAGGCCAAGCTCTCCACGATGAAGAGGATGCTTACCTTTTTCCAAATGACAGATGTATGATCCTCCTTCAGAATCATTAAGCATGTGTTTGGAATTCTTTCCTGAAAAGACTTTTCAATGTGTTTTCATCCCTGAATTCTTTCCAAGTCCTGAAAAGACTTATCAATGTGTTTGGAAACTTTAGCATGAACCAAAAAAATCGACAAAATAAGTTGAGAGGTATGAAAAGGGAGTATTTGTCAAGTTGAGAAAATTCTAGGGTATTTGGAGTTTTGTTGAAGGAGAAAAAACTCTTTGGGAGATGGCTTTCTCTAACAAATATAGGATTGAAGCTCATTGGTGGAAAAGTGAAGTTCCATAGAAAATCAAATTCTTCCTGTGGCCTTGCTTCTAGGGGTTTAAACACACAAAAAAGACTATAGGTGACGAATCCAAATTAAACACACAAAAAAGACTATAGGTGACGAATCCAAATTAGGCTCTTTCTTCCATGGATTGTGGCTTGGGACTTCTTGATGGAAAAAGTTATTCTTCCACCGTCAGTTTTCTACATGCTTAATTATTCAGCCTTTTCAACGTGTCCTTATTCCTTTCCAAGGAACTCGAAGATTGGTTATATGAAGTGTTCTTCAATCGGTGGTTGAAAGGTAAAGCTACTAAAGCTTAAGACATCCTTGGAAATGCACCTTTAAAGGTTTCCTGAGGCTTCTTTGGTTAGTAAGAAATCAAGAGTTTTTGAAGACTATTTTTTTTTTTTTTAAAATAGTTTTTGTGTCCATGTAATTCTACGATTGTATGTTTGACTGGCTTACACAAATCTCTGTTTGATAACCTTGTTTATTTTATCAACCTAGATTGGAACTTCGGAAGGTACTCATGTAATAGTTGTCTTTGGTAGGGGTTTCATCTACCCTCCTCTAGGTTGTATTCTTTTCGTGTTTTGAATATATTGTTTCTTATACTTTTTTGTTTAAGAAAAATTCTTGAAAAATTTTCAATGATAGGAGGATTTTTCAGAAACTTTGAGATCTCAGGGTACCATTTAGTGGTAGCACTAGACAAGAAATTAACCGACTCACTACCTTGCAGCCAAAAAGAGTAAATCATATCTTGAATTTCAGAAATAGGTTGTGTCGATACCTTTCATAGTTTTAGAGGATGCGTGTTTAGGTCAGAAGTTTCTTCTAAGACTTAGAGAATATTGAATAAATCGCCCACCTTCTCAATATTCATTGCTGAAAATGGATTCAACATATTAGAGATGATATATCATCCTTTCCAGCTCGAAAGCCATCTATATTAAACCAGTGATTAAGCCTCTAGGAAGTACCATCATCATGAAGCAATCAGATACTAAAATGAATGGGAAGGGGAGAAAAGATTTCTAGGAAGTACCACCATCCTTTCCAGCTCGAAAGCCATCTATATAAAACCAGTGATTAAGCCTCTAGGAAGTACCACCATCATGAAGCAATCAGATACTAAAATGAATTGGAAGGGGAGAAAAGATTTCCATGTCTCACTCCTCTCAACACAAGGGTTTTCTTTCTATGCTTGCTGCTAGTATGATGGAATAATTATCATCCAAAACGAGCATGAATTTGCCTCCTTCGACAAGTACGAAAACAACTTCAAGATAGTGTCAAGAAAGTTACACTAATCAAGCGTTCATGGGATTTTGGAAGAACTTTTGGATCCACTGTTTGAGGACATGATGTTCGTGGTGGCAAACTGGTTTTGTTTTGTTTTTTTTTTAATACGCCACATCCAACTTTTATTGGACCTCTGTGCTGTTTTCTTGTTGCTTCTTGCCAAACCTTGAGCATTTATGTGCTACCTACAGGTACTTGTACAGAGGCTTGTCAACTGGTGATCGTCCCACTTGTGATCAGTGTCTCAGGATACATGAAAAATTGACAGAAAGGGCTGGCTTAGGCTGCATTCTTCGTTCTCTTGCAGATATTAAGAATACAGTTTGATTTTTCTTGGGGAACACTGAGCAACTTTTTGGCTGATATTGAAAATATTATTATTTTCTCACAGATATATGTCATGCTAGAGCTGAAATGTACTCAAACTATCTAATTTTGACTCGTGTAAATTGCTTTTCAGATTGTGATTGTGTCAAGCAGAGTAGGCTTCAACATCTGTTACATGAATTGATAAGCAAAAAAAATAGGTACTGAATATAATTAAAATTGGTGACATTGGAAAGAA

mRNA sequence

ATGGCGACTACCGATGAATTTGTGGAAGCAGATAATGCAGAAGCCATAATCACCAGAATTGAGCACAAATCTCGAAAGATCGAGAGCTTACTTAAACAGTCTAAACCAATCGAAGCTCTTAAAACTGCACTTGAAGGTTCCCCTCCAAATACCCGAGATGAGCGCTGCAAGTCAGCAAATTGGATTGTGGTGCATAGGGCTCTCATGGCTATAAAGGATGTAGATGGGATGTTTTCTTCCTTGGATCCGGAGTACTATGATATTCTAATGAAGGGAGGATTAGGGTTTCAAGCTTGGACTTTTATCTTGGGTACTAATACCACCATGGAGAAGCTCTCACATCATCCAGGAGAGTGGGGAAACTTTGTGGGAGTCATTGAGACATTTCATAGTGAAAATTGGAACTTCGGAAGGTACTTGTACAGAGGCTTGTCAACTGGTGATCGTCCCACTTGTGATCAGTGTCTCAGGATACATGAAAAATTGACAGAAAGGGCTGGCTTAGGCTGCATTCTTCGTTCTCTTGCAGATATTAAGAATACAGTTTGA

Coding sequence (CDS)

ATGGCGACTACCGATGAATTTGTGGAAGCAGATAATGCAGAAGCCATAATCACCAGAATTGAGCACAAATCTCGAAAGATCGAGAGCTTACTTAAACAGTCTAAACCAATCGAAGCTCTTAAAACTGCACTTGAAGGTTCCCCTCCAAATACCCGAGATGAGCGCTGCAAGTCAGCAAATTGGATTGTGGTGCATAGGGCTCTCATGGCTATAAAGGATGTAGATGGGATGTTTTCTTCCTTGGATCCGGAGTACTATGATATTCTAATGAAGGGAGGATTAGGGTTTCAAGCTTGGACTTTTATCTTGGGTACTAATACCACCATGGAGAAGCTCTCACATCATCCAGGAGAGTGGGGAAACTTTGTGGGAGTCATTGAGACATTTCATAGTGAAAATTGGAACTTCGGAAGGTACTTGTACAGAGGCTTGTCAACTGGTGATCGTCCCACTTGTGATCAGTGTCTCAGGATACATGAAAAATTGACAGAAAGGGCTGGCTTAGGCTGCATTCTTCGTTCTCTTGCAGATATTAAGAATACAGTTTGA

Protein sequence

MATTDEFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKGGLGFQAWTFILGTNTTMEKLSHHPGEWGNFVGVIETFHSENWNFGRYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADIKNTV

Homology

[Close]

BLAST of Spg037512 vs. NCBI nr
Match: XP_008441367.1 (PREDICTED: actin-related protein 2/3 complex subunit 5A [Cucumis melo])

HSP 1 Score: 243.0 bits (619), Expect = 1.9e-60
Identity = 131/182 (71.98%), Postives = 132/182 (72.53%), Query Frame = 0


Query: 1   MATTDEFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSAN 60
           MATT EFVEADNAEAIITRIEHKSRKIESLLKQSKP+EALKTALEGSPPNTRDERCKSAN
Sbjct: 1   MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSAN 60

Query: 61  WIVVHRALMAIKDVDGMFSSLDPEYYDILMKGGLGFQAWTFILGTNTTMEKLSHHPGEWG 120
           WIVVHRALMAIKDVDGMFSSLDPEYYDILMK                             
Sbjct: 61  WIVVHRALMAIKDVDGMFSSLDPEYYDILMK----------------------------- 120

Query: 121 NFVGVIETFHSENWNFGRYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADIKN 180
                             YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLAD  N
Sbjct: 121 ------------------YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTIN 135

Query: 181 TV 183
           TV
Sbjct: 181 TV 135

[Close]

BLAST of Spg037512 vs. NCBI nr
Match: XP_038884940.1 (actin-related protein 2/3 complex subunit 5A [Benincasa hispida] >XP_038884941.1 actin-related protein 2/3 complex subunit 5A [Benincasa hispida] >XP_038884942.1 actin-related protein 2/3 complex subunit 5A [Benincasa hispida] >XP_038884943.1 actin-related protein 2/3 complex subunit 5A [Benincasa hispida])

HSP 1 Score: 242.7 bits (618), Expect = 2.5e-60
Identity = 130/182 (71.43%), Postives = 132/182 (72.53%), Query Frame = 0


Query: 1   MATTDEFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSAN 60
           MATT EFVEADNAEAIITRIEHKSRKIESLLKQS+P+EALKTALEGSPPNTRDERCKSAN
Sbjct: 1   MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSAN 60

Query: 61  WIVVHRALMAIKDVDGMFSSLDPEYYDILMKGGLGFQAWTFILGTNTTMEKLSHHPGEWG 120
           WIVVHRALMAIKDVDGMFSSLDPEYYDILMK                             
Sbjct: 61  WIVVHRALMAIKDVDGMFSSLDPEYYDILMK----------------------------- 120

Query: 121 NFVGVIETFHSENWNFGRYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADIKN 180
                             YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLAD  N
Sbjct: 121 ------------------YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTIN 135

Query: 181 TV 183
           TV
Sbjct: 181 TV 135

[Close]

BLAST of Spg037512 vs. NCBI nr
Match: XP_010089302.1 (actin-related protein 2/3 complex subunit 5A [Morus notabilis] >EXB37627.1 Actin-related protein 2/3 complex subunit 5 [Morus notabilis])

HSP 1 Score: 241.9 bits (616), Expect = 4.3e-60
Identity = 130/182 (71.43%), Postives = 131/182 (71.98%), Query Frame = 0


Query: 1   MATTDEFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSAN 60
           MA TD FVEADNAEAIITRIEHKSRKIESLLKQSKP+EALKTALEGSPPNTRDERCKSAN
Sbjct: 1   MAGTDAFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSAN 60

Query: 61  WIVVHRALMAIKDVDGMFSSLDPEYYDILMKGGLGFQAWTFILGTNTTMEKLSHHPGEWG 120
           WIVVHRALMAIKDVDGMFSSLDPEYYDILMK                             
Sbjct: 61  WIVVHRALMAIKDVDGMFSSLDPEYYDILMK----------------------------- 120

Query: 121 NFVGVIETFHSENWNFGRYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADIKN 180
                             YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLAD  N
Sbjct: 121 ------------------YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTVN 135

Query: 181 TV 183
           TV
Sbjct: 181 TV 135

[Close]

BLAST of Spg037512 vs. NCBI nr
Match: XP_004138489.1 (actin-related protein 2/3 complex subunit 5A [Cucumis sativus] >KGN45721.1 hypothetical protein Csa_005374 [Cucumis sativus])

HSP 1 Score: 240.0 bits (611), Expect = 1.6e-59
Identity = 129/182 (70.88%), Postives = 131/182 (71.98%), Query Frame = 0


Query: 1   MATTDEFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSAN 60
           MATT +FVEADNAEAIITRIEHKSRKIESLLKQ KP+EALKTALEGSPPNTRDERCKSAN
Sbjct: 1   MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSAN 60

Query: 61  WIVVHRALMAIKDVDGMFSSLDPEYYDILMKGGLGFQAWTFILGTNTTMEKLSHHPGEWG 120
           WIVVHRALMAIKDVDGMFSSLDPEYYDILMK                             
Sbjct: 61  WIVVHRALMAIKDVDGMFSSLDPEYYDILMK----------------------------- 120

Query: 121 NFVGVIETFHSENWNFGRYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADIKN 180
                             YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLAD  N
Sbjct: 121 ------------------YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTVN 135

Query: 181 TV 183
           TV
Sbjct: 181 TV 135

[Close]

BLAST of Spg037512 vs. NCBI nr
Match: XP_038683274.1 (actin-related protein 2/3 complex subunit 5A [Tripterygium wilfordii] >XP_038683818.1 actin-related protein 2/3 complex subunit 5A [Tripterygium wilfordii] >KAF5731616.1 actin-related protein 2/3 complex subunit 5A [Tripterygium wilfordii])

HSP 1 Score: 238.8 bits (608), Expect = 3.7e-59
Identity = 126/182 (69.23%), Postives = 132/182 (72.53%), Query Frame = 0


Query: 1   MATTDEFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSAN 60
           MATT+EFVEADNAEAIITRIEHKSRKIESLLKQSKP+EALKTALEGSPPNTRDERCKSAN
Sbjct: 1   MATTEEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSAN 60

Query: 61  WIVVHRALMAIKDVDGMFSSLDPEYYDILMKGGLGFQAWTFILGTNTTMEKLSHHPGEWG 120
           WIVVHRA+MAIKDVD +FS+LDPEYYDILMK                             
Sbjct: 61  WIVVHRAIMAIKDVDALFSALDPEYYDILMK----------------------------- 120

Query: 121 NFVGVIETFHSENWNFGRYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADIKN 180
                             YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILR+LAD  N
Sbjct: 121 ------------------YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRALADTVN 135

Query: 181 TV 183
           TV
Sbjct: 181 TV 135

[Close]

BLAST of Spg037512 vs. ExPASy Swiss-Prot
Match: Q9M117 (Actin-related protein 2/3 complex subunit 5A OS=Arabidopsis thaliana OX=3702 GN=ARPC5A PE=1 SV=2)

HSP 1 Score: 209.9 bits (533), Expect = 2.4e-53
Identity = 114/177 (64.41%), Postives = 119/177 (67.23%), Query Frame = 0


Query: 6   EFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVH 65
           EFVEADNAEAII RIE KSRKIESLLKQ K +EALKTALEGSPP TRDERCKSANWIVVH
Sbjct: 3   EFVEADNAEAIIARIETKSRKIESLLKQYKHVEALKTALEGSPPKTRDERCKSANWIVVH 62

Query: 66  RALMAIKDVDGMFSSLDPEYYDILMKGGLGFQAWTFILGTNTTMEKLSHHPGEWGNFVGV 125
           RALMAIKD+DGM ++LD EYYDILMK                                  
Sbjct: 63  RALMAIKDIDGMLNALDVEYYDILMK---------------------------------- 122

Query: 126 IETFHSENWNFGRYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADIKNTV 183
                        YLYRGLSTGDRPTCDQCL+IHEKLTERAGLGCILR L D  NTV
Sbjct: 123 -------------YLYRGLSTGDRPTCDQCLKIHEKLTERAGLGCILRCLTDTINTV 132

[Close]

BLAST of Spg037512 vs. ExPASy Swiss-Prot
Match: B3H6Y2 (Actin-related protein 2/3 complex subunit 5B OS=Arabidopsis thaliana OX=3702 GN=ARPC5B PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 5.1e-48
Identity = 105/182 (57.69%), Postives = 115/182 (63.19%), Query Frame = 0


Query: 1   MATTDEFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSAN 60
           MA    FVEADNAE I+ RIE KS+KIESLLK  K +EALKTAL+GSPP T DERCKSAN
Sbjct: 1   MAGAAAFVEADNAEEIMARIETKSQKIESLLKHYKHVEALKTALDGSPPKTLDERCKSAN 60

Query: 61  WIVVHRALMAIKDVDGMFSSLDPEYYDILMKGGLGFQAWTFILGTNTTMEKLSHHPGEWG 120
           WIVVHRA+MAIKD++GM +SL  EYYDILMK                             
Sbjct: 61  WIVVHRAIMAIKDIEGMLNSLTAEYYDILMK----------------------------- 120

Query: 121 NFVGVIETFHSENWNFGRYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADIKN 180
                             YLYRGLSTGD PTC+QCL IHEKLTERAGLGCILR L+D  N
Sbjct: 121 ------------------YLYRGLSTGDEPTCEQCLMIHEKLTERAGLGCILRCLSDTTN 135

Query: 181 TV 183
           TV
Sbjct: 181 TV 135

[Close]

BLAST of Spg037512 vs. ExPASy TrEMBL
Match: A0A1S3B407 (Actin-related protein 2/3 complex subunit 5 OS=Cucumis melo OX=3656 GN=LOC103485501 PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 9.4e-61
Identity = 131/182 (71.98%), Postives = 132/182 (72.53%), Query Frame = 0


Query: 1   MATTDEFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSAN 60
           MATT EFVEADNAEAIITRIEHKSRKIESLLKQSKP+EALKTALEGSPPNTRDERCKSAN
Sbjct: 1   MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSAN 60

Query: 61  WIVVHRALMAIKDVDGMFSSLDPEYYDILMKGGLGFQAWTFILGTNTTMEKLSHHPGEWG 120
           WIVVHRALMAIKDVDGMFSSLDPEYYDILMK                             
Sbjct: 61  WIVVHRALMAIKDVDGMFSSLDPEYYDILMK----------------------------- 120

Query: 121 NFVGVIETFHSENWNFGRYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADIKN 180
                             YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLAD  N
Sbjct: 121 ------------------YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTIN 135

Query: 181 TV 183
           TV
Sbjct: 181 TV 135

[Close]

BLAST of Spg037512 vs. ExPASy TrEMBL
Match: W9R3V7 (Actin-related protein 2/3 complex subunit 5 OS=Morus notabilis OX=981085 GN=L484_021833 PE=3 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 2.1e-60
Identity = 130/182 (71.43%), Postives = 131/182 (71.98%), Query Frame = 0


Query: 1   MATTDEFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSAN 60
           MA TD FVEADNAEAIITRIEHKSRKIESLLKQSKP+EALKTALEGSPPNTRDERCKSAN
Sbjct: 1   MAGTDAFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSAN 60

Query: 61  WIVVHRALMAIKDVDGMFSSLDPEYYDILMKGGLGFQAWTFILGTNTTMEKLSHHPGEWG 120
           WIVVHRALMAIKDVDGMFSSLDPEYYDILMK                             
Sbjct: 61  WIVVHRALMAIKDVDGMFSSLDPEYYDILMK----------------------------- 120

Query: 121 NFVGVIETFHSENWNFGRYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADIKN 180
                             YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLAD  N
Sbjct: 121 ------------------YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTVN 135

Query: 181 TV 183
           TV
Sbjct: 181 TV 135

[Close]

BLAST of Spg037512 vs. ExPASy TrEMBL
Match: A0A0A0KD59 (Actin-related protein 2/3 complex subunit 5 OS=Cucumis sativus OX=3659 GN=Csa_6G008040 PE=3 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 7.9e-60
Identity = 129/182 (70.88%), Postives = 131/182 (71.98%), Query Frame = 0


Query: 1   MATTDEFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSAN 60
           MATT +FVEADNAEAIITRIEHKSRKIESLLKQ KP+EALKTALEGSPPNTRDERCKSAN
Sbjct: 1   MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSAN 60

Query: 61  WIVVHRALMAIKDVDGMFSSLDPEYYDILMKGGLGFQAWTFILGTNTTMEKLSHHPGEWG 120
           WIVVHRALMAIKDVDGMFSSLDPEYYDILMK                             
Sbjct: 61  WIVVHRALMAIKDVDGMFSSLDPEYYDILMK----------------------------- 120

Query: 121 NFVGVIETFHSENWNFGRYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADIKN 180
                             YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLAD  N
Sbjct: 121 ------------------YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTVN 135

Query: 181 TV 183
           TV
Sbjct: 181 TV 135

[Close]

BLAST of Spg037512 vs. ExPASy TrEMBL
Match: A0A7J7CD05 (Actin-related protein 2/3 complex subunit 5 OS=Tripterygium wilfordii OX=458696 GN=HS088_TW18G00298 PE=3 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.8e-59
Identity = 126/182 (69.23%), Postives = 132/182 (72.53%), Query Frame = 0


Query: 1   MATTDEFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSAN 60
           MATT+EFVEADNAEAIITRIEHKSRKIESLLKQSKP+EALKTALEGSPPNTRDERCKSAN
Sbjct: 1   MATTEEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSAN 60

Query: 61  WIVVHRALMAIKDVDGMFSSLDPEYYDILMKGGLGFQAWTFILGTNTTMEKLSHHPGEWG 120
           WIVVHRA+MAIKDVD +FS+LDPEYYDILMK                             
Sbjct: 61  WIVVHRAIMAIKDVDALFSALDPEYYDILMK----------------------------- 120

Query: 121 NFVGVIETFHSENWNFGRYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADIKN 180
                             YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILR+LAD  N
Sbjct: 121 ------------------YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRALADTVN 135

Query: 181 TV 183
           TV
Sbjct: 181 TV 135

[Close]

BLAST of Spg037512 vs. ExPASy TrEMBL
Match: A0A6P4A354 (Actin-related protein 2/3 complex subunit 5 OS=Ziziphus jujuba OX=326968 GN=LOC107424250 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 2.3e-59
Identity = 128/182 (70.33%), Postives = 130/182 (71.43%), Query Frame = 0


Query: 1   MATTDEFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSAN 60
           MA T EFVEADNAEAIITRIEHKSRKIESLLKQ KP+EALKTALEGSPPNTRDERCKSAN
Sbjct: 1   MAGTGEFVEADNAEAIITRIEHKSRKIESLLKQYKPVEALKTALEGSPPNTRDERCKSAN 60

Query: 61  WIVVHRALMAIKDVDGMFSSLDPEYYDILMKGGLGFQAWTFILGTNTTMEKLSHHPGEWG 120
           WIVVHRA+MAIKDVDGMFSSLDPEYYDILMK                             
Sbjct: 61  WIVVHRAIMAIKDVDGMFSSLDPEYYDILMK----------------------------- 120

Query: 121 NFVGVIETFHSENWNFGRYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADIKN 180
                             YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLAD  N
Sbjct: 121 ------------------YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTVN 135

Query: 181 TV 183
           TV
Sbjct: 181 TV 135

[Close]

BLAST of Spg037512 vs. TAIR 10
Match: AT4G01710.1 (ARP2/3 complex 16 kDa subunit (p16-Arc) )

HSP 1 Score: 209.9 bits (533), Expect = 1.7e-54
Identity = 114/177 (64.41%), Postives = 119/177 (67.23%), Query Frame = 0


Query: 6   EFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSANWIVVH 65
           EFVEADNAEAII RIE KSRKIESLLKQ K +EALKTALEGSPP TRDERCKSANWIVVH
Sbjct: 3   EFVEADNAEAIIARIETKSRKIESLLKQYKHVEALKTALEGSPPKTRDERCKSANWIVVH 62

Query: 66  RALMAIKDVDGMFSSLDPEYYDILMKGGLGFQAWTFILGTNTTMEKLSHHPGEWGNFVGV 125
           RALMAIKD+DGM ++LD EYYDILMK                                  
Sbjct: 63  RALMAIKDIDGMLNALDVEYYDILMK---------------------------------- 122

Query: 126 IETFHSENWNFGRYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADIKNTV 183
                        YLYRGLSTGDRPTCDQCL+IHEKLTERAGLGCILR L D  NTV
Sbjct: 123 -------------YLYRGLSTGDRPTCDQCLKIHEKLTERAGLGCILRCLTDTINTV 132

[Close]

BLAST of Spg037512 vs. TAIR 10
Match: AT5G65274.1 (ARP2/3 complex 16 kDa subunit (p16-Arc) )

HSP 1 Score: 192.2 bits (487), Expect = 3.7e-49
Identity = 105/182 (57.69%), Postives = 115/182 (63.19%), Query Frame = 0


Query: 1   MATTDEFVEADNAEAIITRIEHKSRKIESLLKQSKPIEALKTALEGSPPNTRDERCKSAN 60
           MA    FVEADNAE I+ RIE KS+KIESLLK  K +EALKTAL+GSPP T DERCKSAN
Sbjct: 1   MAGAAAFVEADNAEEIMARIETKSQKIESLLKHYKHVEALKTALDGSPPKTLDERCKSAN 60

Query: 61  WIVVHRALMAIKDVDGMFSSLDPEYYDILMKGGLGFQAWTFILGTNTTMEKLSHHPGEWG 120
           WIVVHRA+MAIKD++GM +SL  EYYDILMK                             
Sbjct: 61  WIVVHRAIMAIKDIEGMLNSLTAEYYDILMK----------------------------- 120

Query: 121 NFVGVIETFHSENWNFGRYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADIKN 180
                             YLYRGLSTGD PTC+QCL IHEKLTERAGLGCILR L+D  N
Sbjct: 121 ------------------YLYRGLSTGDEPTCEQCLMIHEKLTERAGLGCILRCLSDTTN 135

Query: 181 TV 183
           TV
Sbjct: 181 TV 135

The following BLAST results are available for this feature:

BLAST of Spg037512 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441367.1	1.9e-60	71.98	PREDICTED: actin-related protein 2/3 complex subunit 5A [Cucumis melo]	[more]
XP_038884940.1	2.5e-60	71.43	actin-related protein 2/3 complex subunit 5A [Benincasa hispida] >XP_038884941.1...	[more]
XP_010089302.1	4.3e-60	71.43	actin-related protein 2/3 complex subunit 5A [Morus notabilis] >EXB37627.1 Actin...	[more]
XP_004138489.1	1.6e-59	70.88	actin-related protein 2/3 complex subunit 5A [Cucumis sativus] >KGN45721.1 hypot...	[more]
XP_038683274.1	3.7e-59	69.23	actin-related protein 2/3 complex subunit 5A [Tripterygium wilfordii] >XP_038683...	[more]

BLAST of Spg037512 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M117	2.4e-53	64.41	Actin-related protein 2/3 complex subunit 5A OS=Arabidopsis thaliana OX=3702 GN=...	[more]
B3H6Y2	5.1e-48	57.69	Actin-related protein 2/3 complex subunit 5B OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of Spg037512 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B407	9.4e-61	71.98	Actin-related protein 2/3 complex subunit 5 OS=Cucumis melo OX=3656 GN=LOC103485...	[more]
W9R3V7	2.1e-60	71.43	Actin-related protein 2/3 complex subunit 5 OS=Morus notabilis OX=981085 GN=L484...	[more]
A0A0A0KD59	7.9e-60	70.88	Actin-related protein 2/3 complex subunit 5 OS=Cucumis sativus OX=3659 GN=Csa_6G...	[more]
A0A7J7CD05	1.8e-59	69.23	Actin-related protein 2/3 complex subunit 5 OS=Tripterygium wilfordii OX=458696 ...	[more]
A0A6P4A354	2.3e-59	70.33	Actin-related protein 2/3 complex subunit 5 OS=Ziziphus jujuba OX=326968 GN=LOC1...	[more]

BLAST of Spg037512 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G01710.1	1.7e-54	64.41	ARP2/3 complex 16 kDa subunit (p16-Arc)	[more]
AT5G65274.1	3.7e-49	57.69	ARP2/3 complex 16 kDa subunit (p16-Arc)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006789	Actin-related protein 2/3 complex subunit 5	PFAM	PF04699	P16-Arc	coord: 8..91 e-value: 6.6E-8 score: 33.1 coord: 138..179 e-value: 2.1E-6 score: 28.2
IPR006789	Actin-related protein 2/3 complex subunit 5	PANTHER	PTHR12644	ARP2/3 COMPLEX 16 KD SUBUNIT P16-ARC	coord: 3..180
IPR036743	Actin-related protein 2/3 complex subunit 5 superfamily	GENE3D	1.25.40.190		coord: 127..180 e-value: 5.4E-10 score: 41.4
IPR036743	Actin-related protein 2/3 complex subunit 5 superfamily	GENE3D	1.25.40.190		coord: 2..92 e-value: 1.7E-12 score: 49.8
IPR036743	Actin-related protein 2/3 complex subunit 5 superfamily	SUPERFAMILY	69103	Arp2/3 complex 16 kDa subunit ARPC5	coord: 138..179
IPR036743	Actin-related protein 2/3 complex subunit 5 superfamily	SUPERFAMILY	69103	Arp2/3 complex 16 kDa subunit ARPC5	coord: 4..91
None	No IPR available	PANTHER	PTHR12644:SF0	ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 5	coord: 3..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg037512.1	Spg037512.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034314	Arp2/3 complex-mediated actin nucleation
biological_process	GO:0030833	regulation of actin filament polymerization
cellular_component	GO:0005885	Arp2/3 protein complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0015629	actin cytoskeleton
molecular_function	GO:0051015	actin filament binding