Spg037476 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg037476
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	U4/U6 small nuclear ribonucleoprotein PRP4-like protein
Location	scaffold11: 33580932 .. 33587631 (-)
RNA-Seq Expression	Spg037476
Synteny	Spg037476

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCCACACCACTTCTTCTCCCCGACGTCTCCTCCGTTTCAGCAGCTTAGTGTCGCCGCCGCCTCTCTCCCGTTCTCTGCTGCCGCGTCCGTCGTCTTGCTTCCGGTCGTGCTGCCACCACCGTTGTCTTTCTTCCCTTCGTGCCGCCGCAGCCTCCCTCCTAGCGGTTCTGCACTGATTTTCTACTCCTTACTGGTATTCTCCCAATGTCCATCTACGTCTTTCTTCTTACTTGAAGTACAAAAATTAGAACTTATCTCTTGAAAAAATGGAGGAGTTGTTGGATTTTTAATTTTTGTTTTTAATTTTTAAACAACAGAGTCAAATAGCAACGAAGAAAACAGCCTCGCGGCAAATTGGGACGTGGTTTGTGTTTGGCTGTTCTGATTCTGGCATGAATCAGTCATCCAATTCTCTTTTAATTCCTACCTTGATTGATTGACCGAACAATTTCAACCTTATTTATATGGGTATATTGTATATTTTTCCCGAATCGTGTTTTTACTGCGAACATGATGAGAGAAATTTGTGTTTATGAAACTACAAGAGTTTAGATAGTGTGTATTGCAGTGTCGTGTTTCTATTTTCAAATGCCTGTTCGATAATCTGTTATAAGGATGGTGCAGACTCTGATTCTTACTTTCTGTTTCCTTCATGATTGGTTTGATTTTTTCTGTACTTTTGGAAGTTTCCAGTTAAGAATGAATTTCATATTTAACTATATATGCTTGGCTTTGTTTCGCACTTGTGTTGTATTAACTAACTTTTAAGAACTTGACTGTAGAGAAGGAATGGTAAAAGGAGCTCAATATCTGGGATAAGTTTATTTTGTTTAGAAGTTTCATTTGCGAGCTATCATGGAAGTTGATGATCAAAACCCTGCATCATCTGCTGCGGAATCTCCTGAAACCCTTCCTCATGGGGAAAATGGGGATCCTGATAATCCAGCAGAACCAATTCAACCTGCAGCTACATTAGTTATTCCACCTCCAATTGTGCCTGCCATTGCTCCTATACCCCCTCCAATTATTCGTCCACTGGCACCTCTTCCGAGTCGACCTCCTCTCTTTAGGCCCTCAACAACTCAAAATGGTGAGTTAAGAACAAGTGACTCAGATTCGGAACATGATGATTTGGCCCCTTCCCGAACAGCTCCAGGTTCAACAGCAGAATATGAAGTATCAGAAGAGAGTAGACTGGTGAGAGAGCGTCAGGAAAAAGCCATGCAAGAATTTTTGATGAAGCGTCGTGCTTCTGCTTTAGCAGTGCCTACTAATGACATGGCTGTTCGAGCTCGTCTTCGCCGTCTTGGTGAACCCATTACTCTTTTTGGGGAAAGAGAAATGGAAAGACGGGACAGGTTGCGGTCAATAATGGCACGGTTGGATGCTGAAGGGCAATTAGAGAAGCTGATGAAAGTTCATGAGGAAGAAGAGGCTGCAGCTACAGGTGGGATTGAGGAGGCTGAGGAGGAAGTGCTTCAGTATCCCTTTTACACTGAGGGGTCCAAAGCTCTCTTGGAGGCCAGAATTGATATTGCAAAGTATTCTATCGTAAGAGCAGCTTCACGTCTTGAGCGTGCAAAGAGGAAGAGGGATGATCCAGATGAAGATGTGGAAGCAGAAATGGATTGGGCTCTGAGACAGGCTGGAAGTTTGGTCCTGGACTGCAGTGAGATAGGAGATGATCGACCACTTTCTGGTTGTTCTTTCTCATCTGATGGAAAATTCCTTGCCACTAGGTACCCTTCTATCTTTGCAGTTAAAGCTTTTTTGTTACATAACTAGTACCAGTGTCTCCTTTTCAATATCACCCCCATTTCACCTTCTGATTAAAAAAAAAAAAAAGAAAAAAAGGAAAAAAGAAAGAAGAAGAAGATTATTGTGGCTGTGGATTAGCTATCTTCTTCCTTCTTAACTCTAATTCCTCAGTTGGAGGAACGAGAGGCTAAAGATAATGTACAAGTGAAGGTTTTTGCATTTTCAATTCCAATACTTGATAGGCTTTGTATTTAGCTTTTATTTTACTCTTCTGCATACGTCTACTGGTTTTGTATGTGATGGCTTTTGTATTTTTATTCTTGTTTAATTTTTTTAGTTCATTAAGCGGAGTTGCAAAATTGTGGAGCATGCCTCAAGTAAGGAAGGTTTCCAACTTTAAGGGACATACAGAACGTGTTACTGATGTAATATTTTCTCCAGTGAATGAGTGTTTAGTTACTGCCTCTGCTGACCGAACTGCAAGGTTGTGGTCTGCTGAAGGATCTCTCCTTCAAACATTCGAGGGCCATCTGGATCGCCTTGCACGAATTGCCTTCCACCCATCAGGTAAGTACTTGGGTACAACTAGCTTTGACAAGACTTGGAGATTATGGGACGTTGAAACTGGTGTTGAGTTGCTTCTTCAAGAAGGTCATAGTAGAAGTGTCTATGGGATAGCCTTCCACCATGATGGATCTTTAGTATCATCTTGTGGACTTGATGCACTTGCTCGTGTTTGGGACCTTCGAACTGGTAGAAGTGTTCTTGCTTTAGAAGGCCACGTCAAGCCTGTAAATCTCTTTCCTTTCTTACATTGAGATGGTAGAACATTTATTTTTAATGAATTTCACTTGTTTGCTCCTTACTGATACCTTGCTTTTCAATGGATTTCATTTGTTTATGATGTTATAACCAGGTCCTTGGAGTTAGTTTTTCGCCCAATGGTTATCATTTAGCTACTGGTGGAGAAGATAACACTTGTCGGATATGGGACTTAAGGAAGAAAAAATCTCTATACATAATACCTGCACACTCGAACCTTGTTTCACAGGTGAAATATGAGCCTCAAGAGGGATATTTCTTGGTAACTGCATCATTTGATATGACAGCAAAGGTGATTTCTTGAACACTGTCAGGACTCAGGATGATATAGTCTTAATATTTTCATTTGATTGTTGGTTCATCTCACTATAGTCTGAGGTTTCATTTTATATCATATGCTTAATTTTTTGCAGATTTGGTCTGCTCGAGATTTTAAGCCTGTGAAGACACTCTCTGGTCACGAAGCAAAAGTTACATCTTTGGATATAATTTCAGGTTAGTTGTTGATCGACTCCTAGGTCATTATTATTATTTACAGATTACCACCCAGGTCATTATTGTAGACCATTTTTACATCATTTTAAGGTTTTTTCCACACATTTCTTGTATTTAGCATGAACTTGGGTCGGTTAGATATCACTAATGTCTCAGGGTTGGGGGTAGTGGAAGGTACAATCATGCAAGAAACTATGGCTTATGCTATACTCATTTTTACATCCTTTTAAGGTTTTTTCCACACATTTCCTGTATTTAGCATGAACTTGAGTTGATTAGATATCATTAGTGTCTCACGGGTGGGGGAGTGGAAGGTACAATCATGCAAGAAACTATGGCTTATGCTATACTCATCTTTGTTTGGTAATAAAATTCTTTCTAGAAGTCCTGATAGATTATTTTTATGGGAAAACTTCTTTAAAGATCTCAATTTTGCTTGCGTGGAAGCCAACCTAGACATAACTCAACTGGTTAAGGCATATGTTCTCTATCAAAAGTGTTATGATTCGAATCCCCTACTCCCAAATGTTTTATTGAACTCAAAAAATTTCCTATTGTGGAGCTGGTTCGTGTAGCTTTGTTGTAAGAATGGATGGCATAGACATTAGCTACCTACCAACATGTGTTCTTTTATGTATTGTTTTTTAAAAATTCAATGTCAATAATTTTCTTGGTAAAATAAACTAATGTGCTTGAAAGCACTTTTGCGTATTAAGGGTGATAATCTGTTGGGTTTGATGACGTATGCCTGGTCTGCAATCTACACCATAGGGCGTGGCTGGGATTTCCAAATTGCAAAACCCCAACCCTTTGCTATTGGATGGCATTTCCTATCATTGAAATCTTCTCTTCGAAACCTCCTCCGTTTGTCCTGTATAAGGAAGGACAGACCCCCTATGGGAAAAATCCTGGCCAGAAATTTTGAGCAGAACCTGAGAAAACCTAAAAAAAAAAAAAAAAAATTTAGGCATTAGTTTTAATTTGCTTTTGAAGTTGTCCTTTCCTGTTCTTGTCTTTCTGGTCGTGGTTGTAGATATCCCAAGTAGAATAGTCTAGAGGGGCAGAGGGGAACATTCTTGAGGGGTTTTAGGTCGGGAGGGGCAGAGTTTTACAACCAATGGCAGATTCTTCTTTTGTTTAGGCAAGGAAGGGTCTTTTGTTAATCAAAACTATATCCGGTCTCTTTTTGTGTCTATATCTAGTCTGAAGATTAATAGAAGTGTCAACTGTTGGGTACAAATTGTGATTCTTGGTTAGGTAGGCCTCTTTAGTGGGGTGTGTGGTACACACTTCCCTCTTCGTATTTTGGTCTTTCCCTTGGTGACAACCCCAAAGGCTCGTCTCTTGGAACCTGGTTATGGAAAAGATTTAGAGATGCTTGACCTTTGGAAGTGGAGTTTTTTTTTTTTTTCCTTCCCTTCCTTCTAAGGGTGGTAGATTAACTCATTCAATCGATTTCTAGAAAAATGTGACTTACTTTCTCTCATTGTTTAGGACACTCATCTCAATTAGTTGGAGGATAGAGAAGGTATGGGGGATTTCTTATGGGAACGGGTTGATGAGGGAAAAGTATTACATGTAGTTAAGTGGGGAGTGATGACCAAACCGTTGGATTTTGGGGGTTTAGGCCTCGGGAAGTTGAGAGCGGGTAATGTGGCCCTTTTAGCCCTTTCTTCTCTAAAGGGGGTGGCTCATTCTTACTCAGTCGGTGTTGAGTGGGATCCCTAGTTACTTCATGTCTCTTTTTAGAATTGTAGTCTTTGAGTAAGAACATGAGTGAGTGATGAGGAATTTCTTGTGGGGAGGGAGGGGTTGACGAGGGTGGAGGATCCTACTTGGTTAAGGGGGAGGAGGTGTTGAAGATCGTGGAGCTAGGAGGTTTAAGTATTGGGAGCTTGAGATTATGCAATGGGGCTTTTCTAGCCAAATGGTTGTGGTAGTTATTCATGGAGTCCAACGTGGTATATGGTTGTTGTGAGCAGGTATTACCTTCATCTTTTTAAGTGGATTGCAGGTGGTGGTTCTAGGAATCTGAGCAAAAACCTTCTAAAAGCTTTGGCCTTTGGATTTCCTTTTTTCTCTTAGTTCGTTAAATGCTTTGTTTGGGAAGGCTCGAAGGTTTATTTTTGGGAGAATTGTTGGATGGGCGATAAATCCCTATGTGTTTGTTACCAAGATTATATCATTTTTTGGACAAGAGGTCGCATTCAATGGCTTGTATTTTACCTTCCTCTAATCCTTCTTCTTTGATCTTCTTAGGCTTTTGTCATCACTTGTTTATGAGAGGGGACTAAAGTGGCAAGTATTCATTCTCTAAATTTGAGACCATCATGTGCTATCTAGGAGGAGGGGTGTCAAGATTTGGTCCCCCAAATCCTTTAGTTTTTTGCATGGTGGGTTTTACATGAGAGAGTTAATACCGTGGATCATATTCAAAGTAATTCTTCCTACATATTGTATTCACAATGATAGGGATTCGAGGAGGATCTTGATCATTTGTTGTGAGATTTTGCTAGTTTACTCAATTGCTTTGGAGTTGTGGATGAGATTGTTTGGTGTTTGTGGGGCGCGAAATAGAGATAGTAGATCTATGATGGAGATGCTTTCGAATCCTCATTTTTGAGAGAAGGGTATGTGTTGTGGCATGTGAGTTTCTTTGCCGTTTTATGGGGCATTGTGTGAGAGGGTGTTAGGTTTAGTGCCTTGTTGGTGTAGGTCATTAAGTCTTTTTATAATTATGAGCGTGGTCTTGTTTGTTGGATTGAAATCATTTTTTGTAGTTAGGAGTTCAGACTCCTTTTTGGTTTAGGCTTGTTTTTTATGTATGTGTATTCTTTCCTATCTCTCAATGAAAGCACGGTTTCTTACTAATAATAAAGTAAAATAAAATAAAATAAGGCCCTTTTGGCCAAGTGGTTGTGAGATTTTTCTTAGGGAACTGATACCTTGTGGGAGAAGATTGTTGTGAGCTAGTATAGTCCTCATCCCTTAAATGGTCCTTGGGTTAGGGTTCAAAAGGCACTTCTAGAAATCCTTGGAAAGTTATCTTTGAGGGGGTCTCCTTTTCTCTCAACTTGTTCAATATATTGTGGGTGAAGAGTCCAATACCAGCTTTTGGAGGATAAGTGGTTGGGGGATAAACCCGTTTGTTTTGTGTTGCATTGTATGTATTGCCTTTCTTCTATGAGGTATCATTTAGTGACCTGTTTTTCCTTCTCAAGGAACTTGATTTTCTCTCTTGGGATTTGTTGTCCTTTGTCCAGCAGGACAACATATATTACAGCTCTTGTCATTCATAAGGGGTTTTTTGGTTCTTCTACTAGGGAAAAGGGACTCTTATATCTGGGTCCCAACCCTTTAGAGGGGCTTTCTTGTAGCCCTTTCTTTCGCTGTTTGGTGGTTTCTTCTCTGGCTACTTGTTCAGTGCTTTCCTCACTTTGGAAGATTAAAATTTCGAAGAAGGTCAATTCTTTTGTGTCACAAATTCTCAACAATAGAGTCACTACATTAGACCATATCATGAGGGAATCAACCTCTTTGATAGGGCTGCAACGTTGTATCCTTCGCAGGGTGATTGAGGGTCTAGATCACCTTCTCTGGGATTGTCGGTTCACTTATTAG

mRNA sequence

ATGCTCCACACCACTTCTTCTCCCCGACGTCTCCTCCGTTTCAGCAGCTTAGTGTCGCCGCCGCCTCTCTCCCGTTCTCTGCTGCCGCGTCCGTCGTCTTGCTTCCGGTCGTGCTGCCACCACCGTTGTCTTTCTTCCCTTCGTGCCGCCGCAGCCTCCCTCCTAGCGAAGTTTCATTTGCGAGCTATCATGGAAGTTGATGATCAAAACCCTGCATCATCTGCTGCGGAATCTCCTGAAACCCTTCCTCATGGGGAAAATGGGGATCCTGATAATCCAGCAGAACCAATTCAACCTGCAGCTACATTAGTTATTCCACCTCCAATTGTGCCTGCCATTGCTCCTATACCCCCTCCAATTATTCGTCCACTGGCACCTCTTCCGAGTCGACCTCCTCTCTTTAGGCCCTCAACAACTCAAAATGGTGAGTTAAGAACAAGTGACTCAGATTCGGAACATGATGATTTGGCCCCTTCCCGAACAGCTCCAGGTTCAACAGCAGAATATGAAGTATCAGAAGAGAGTAGACTGGTGAGAGAGCGTCAGGAAAAAGCCATGCAAGAATTTTTGATGAAGCGTCGTGCTTCTGCTTTAGCAGTGCCTACTAATGACATGGCTGTTCGAGCTCGTCTTCGCCGTCTTGGTGAACCCATTACTCTTTTTGGGGAAAGAGAAATGGAAAGACGGGACAGGTTGCGGTCAATAATGGCACGGTTGGATGCTGAAGGGCAATTAGAGAAGCTGATGAAAGTTCATGAGGAAGAAGAGGCTGCAGCTACAGGTGGGATTGAGGAGGCTGAGGAGGAAGTGCTTCAGTATCCCTTTTACACTGAGGGGTCCAAAGCTCTCTTGGAGGCCAGAATTGATATTGCAAAGTATTCTATCGTAAGAGCAGCTTCACGTCTTGAGCGTGCAAAGAGGAAGAGGGATGATCCAGATGAAGATGTGGAAGCAGAAATGGATTGGGCTCTGAGACAGGCTGGAAGTTTGGTCCTGGACTGCAGTGAGATAGGAGATGATCGACCACTTTCTGGTTGTTCTTTCTCATCTGATGGAAAATTCCTTGCCACTAGTTCATTAAGCGGAGTTGCAAAATTGTGGAGCATGCCTCAAGTAAGGAAGGTTTCCAACTTTAAGGGACATACAGAACGTGTTACTGATGTAATATTTTCTCCAGTGAATGAGTGTTTAGTTACTGCCTCTGCTGACCGAACTGCAAGGTTGTGGTCTGCTGAAGGATCTCTCCTTCAAACATTCGAGGGCCATCTGGATCGCCTTGCACGAATTGCCTTCCACCCATCAGGTAAGTACTTGGGTACAACTAGCTTTGACAAGACTTGGAGATTATGGGACGTTGAAACTGGTGTTGAGTTGCTTCTTCAAGAAGGTCATAGTAGAAGTGTCTATGGGATAGCCTTCCACCATGATGGATCTTTAGTATCATCTTGTGGACTTGATGCACTTGCTCGTGTTTGGGACCTTCGAACTGGTAGAAGTGTTCTTGCTTTAGAAGGCCACGTCAAGCCTGTCCTTGGAGTTAGTTTTTCGCCCAATGGTTATCATTTAGCTACTGGTGGAGAAGATAACACTTGTCGGATATGGGACTTAAGGAAGAAAAAATCTCTATACATAATACCTGCACACTCGAACCTTGTTTCACAGGTGAAATATGAGCCTCAAGAGGGATATTTCTTGGTAACTGCATCATTTGATATGACAGCAAAGATTTGGTCTGCTCGAGATTTTAAGCCTGTGAAGACACTCTCTGGTCACGAAGCAAAAGTTACATCTTTGGATATAATTTCAGATATCCCAAGTAGAATAGTAGGCCTCTTTAGTGGGGTGTGTGGTACACACTTCCCTCTTCGTATTTTGGTCTTTCCCTTGGTGACAACCCCAAAGGCTCGTCTCTTGGAACCTGGTTATGGAAAAGATTTAGAGATGCTTGACCTTTGGAAGCCTCGGGAAGTTGAGAGCGGCAGGACAACATATATTACAGCTCTTGTCATTCATAAGGGGTTTTTTGGTTCTTCTACTAGGGAAAAGGGACTCTTATATCTGGGTCCCAACCCTTTAGAGGGGCTTTCTTGTAGCCCTTTCTTTCGCTGTTTGGTGGTTTCTTCTCTGGCTACTTGTTCAGTGCTTTCCTCACTTTGGAAGATTAAAATTTCGAAGAAGGTCAATTCTTTTGTGTCACAAATTCTCAACAATAGAGTCACTACATTAGACCATATCATGAGGGAATCAACCTCTTTGATAGGGCTGCAACGTTGTATCCTTCGCAGGGTGATTGAGGGTCTAGATCACCTTCTCTGGGATTGTCGGTTCACTTATTAG

Coding sequence (CDS)

ATGCTCCACACCACTTCTTCTCCCCGACGTCTCCTCCGTTTCAGCAGCTTAGTGTCGCCGCCGCCTCTCTCCCGTTCTCTGCTGCCGCGTCCGTCGTCTTGCTTCCGGTCGTGCTGCCACCACCGTTGTCTTTCTTCCCTTCGTGCCGCCGCAGCCTCCCTCCTAGCGAAGTTTCATTTGCGAGCTATCATGGAAGTTGATGATCAAAACCCTGCATCATCTGCTGCGGAATCTCCTGAAACCCTTCCTCATGGGGAAAATGGGGATCCTGATAATCCAGCAGAACCAATTCAACCTGCAGCTACATTAGTTATTCCACCTCCAATTGTGCCTGCCATTGCTCCTATACCCCCTCCAATTATTCGTCCACTGGCACCTCTTCCGAGTCGACCTCCTCTCTTTAGGCCCTCAACAACTCAAAATGGTGAGTTAAGAACAAGTGACTCAGATTCGGAACATGATGATTTGGCCCCTTCCCGAACAGCTCCAGGTTCAACAGCAGAATATGAAGTATCAGAAGAGAGTAGACTGGTGAGAGAGCGTCAGGAAAAAGCCATGCAAGAATTTTTGATGAAGCGTCGTGCTTCTGCTTTAGCAGTGCCTACTAATGACATGGCTGTTCGAGCTCGTCTTCGCCGTCTTGGTGAACCCATTACTCTTTTTGGGGAAAGAGAAATGGAAAGACGGGACAGGTTGCGGTCAATAATGGCACGGTTGGATGCTGAAGGGCAATTAGAGAAGCTGATGAAAGTTCATGAGGAAGAAGAGGCTGCAGCTACAGGTGGGATTGAGGAGGCTGAGGAGGAAGTGCTTCAGTATCCCTTTTACACTGAGGGGTCCAAAGCTCTCTTGGAGGCCAGAATTGATATTGCAAAGTATTCTATCGTAAGAGCAGCTTCACGTCTTGAGCGTGCAAAGAGGAAGAGGGATGATCCAGATGAAGATGTGGAAGCAGAAATGGATTGGGCTCTGAGACAGGCTGGAAGTTTGGTCCTGGACTGCAGTGAGATAGGAGATGATCGACCACTTTCTGGTTGTTCTTTCTCATCTGATGGAAAATTCCTTGCCACTAGTTCATTAAGCGGAGTTGCAAAATTGTGGAGCATGCCTCAAGTAAGGAAGGTTTCCAACTTTAAGGGACATACAGAACGTGTTACTGATGTAATATTTTCTCCAGTGAATGAGTGTTTAGTTACTGCCTCTGCTGACCGAACTGCAAGGTTGTGGTCTGCTGAAGGATCTCTCCTTCAAACATTCGAGGGCCATCTGGATCGCCTTGCACGAATTGCCTTCCACCCATCAGGTAAGTACTTGGGTACAACTAGCTTTGACAAGACTTGGAGATTATGGGACGTTGAAACTGGTGTTGAGTTGCTTCTTCAAGAAGGTCATAGTAGAAGTGTCTATGGGATAGCCTTCCACCATGATGGATCTTTAGTATCATCTTGTGGACTTGATGCACTTGCTCGTGTTTGGGACCTTCGAACTGGTAGAAGTGTTCTTGCTTTAGAAGGCCACGTCAAGCCTGTCCTTGGAGTTAGTTTTTCGCCCAATGGTTATCATTTAGCTACTGGTGGAGAAGATAACACTTGTCGGATATGGGACTTAAGGAAGAAAAAATCTCTATACATAATACCTGCACACTCGAACCTTGTTTCACAGGTGAAATATGAGCCTCAAGAGGGATATTTCTTGGTAACTGCATCATTTGATATGACAGCAAAGATTTGGTCTGCTCGAGATTTTAAGCCTGTGAAGACACTCTCTGGTCACGAAGCAAAAGTTACATCTTTGGATATAATTTCAGATATCCCAAGTAGAATAGTAGGCCTCTTTAGTGGGGTGTGTGGTACACACTTCCCTCTTCGTATTTTGGTCTTTCCCTTGGTGACAACCCCAAAGGCTCGTCTCTTGGAACCTGGTTATGGAAAAGATTTAGAGATGCTTGACCTTTGGAAGCCTCGGGAAGTTGAGAGCGGCAGGACAACATATATTACAGCTCTTGTCATTCATAAGGGGTTTTTTGGTTCTTCTACTAGGGAAAAGGGACTCTTATATCTGGGTCCCAACCCTTTAGAGGGGCTTTCTTGTAGCCCTTTCTTTCGCTGTTTGGTGGTTTCTTCTCTGGCTACTTGTTCAGTGCTTTCCTCACTTTGGAAGATTAAAATTTCGAAGAAGGTCAATTCTTTTGTGTCACAAATTCTCAACAATAGAGTCACTACATTAGACCATATCATGAGGGAATCAACCTCTTTGATAGGGCTGCAACGTTGTATCCTTCGCAGGGTGATTGAGGGTCTAGATCACCTTCTCTGGGATTGTCGGTTCACTTATTAG

Protein sequence

MLHTTSSPRRLLRFSSLVSPPPLSRSLLPRPSSCFRSCCHHRCLSSLRAAAASLLAKFHLRAIMEVDDQNPASSAAESPETLPHGENGDPDNPAEPIQPAATLVIPPPIVPAIAPIPPPIIRPLAPLPSRPPLFRPSTTQNGELRTSDSDSEHDDLAPSRTAPGSTAEYEVSEESRLVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGIEEAEEEVLQYPFYTEGSKALLEARIDIAKYSIVRAASRLERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVIFSPVNECLVTASADRTARLWSAEGSLLQTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISDIPSRIVGLFSGVCGTHFPLRILVFPLVTTPKARLLEPGYGKDLEMLDLWKPREVESGRTTYITALVIHKGFFGSSTREKGLLYLGPNPLEGLSCSPFFRCLVVSSLATCSVLSSLWKIKISKKVNSFVSQILNNRVTTLDHIMRESTSLIGLQRCILRRVIEGLDHLLWDCRFTY

Homology

[Close]

BLAST of Spg037476 vs. NCBI nr
Match: XP_038885479.1 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Benincasa hispida] >XP_038885480.1 U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Benincasa hispida])

HSP 1 Score: 1013.1 bits (2618), Expect = 1.3e-291
Identity = 520/540 (96.30%), Postives = 528/540 (97.78%), Query Frame = 0


Query: 64  MEVDDQNPASSAAESPETLPHGENGDPDNPAEPIQPAATLVIPPPIVPAIAPIPPPIIRP 123
           MEVDDQNPAS+AAESPETLP GEN D DNPAEPIQPAAT VIPP +VP+IAPIPPPIIRP
Sbjct: 1   MEVDDQNPASTAAESPETLPGGENEDLDNPAEPIQPAATSVIPPSVVPSIAPIPPPIIRP 60

Query: 124 LAPLPSRPPLFRPSTTQNGELRTSDSDSEHDDLAPSRTAPGSTAEYEVSEESRLVRERQE 183
           LAPLPSRPP FRP  TQNGE+RTSDSDSEHD+LAPSRTA GSTAEYEVSEESR VRERQE
Sbjct: 61  LAPLPSRPPHFRPPVTQNGEMRTSDSDSEHDELAPSRTAGGSTAEYEVSEESRQVRERQE 120

Query: 184 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 243
           KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG
Sbjct: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180

Query: 244 QLEKLMKVHEEEEAAATGGIEEAEEEVLQYPFYTEGSKALLEARIDIAKYSIVRAASRLE 303
           QLEKLMKVHEEEEAAATGG EEAEEEVLQYPFYTEGSKALL+ARIDIAKYSI+RAASRLE
Sbjct: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRLE 240

Query: 304 RAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 363
           RAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV
Sbjct: 241 RAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300

Query: 364 AKLWSMPQVRKVSNFKGHTERVTDVIFSPVNECLVTASADRTARLWSAEGSLLQTFEGHL 423
           AKLWSMPQVRKVSNFKGHTERVTDVIFSPVNECL TASADRTARLWSAEGSLL+TFEGHL
Sbjct: 301 AKLWSMPQVRKVSNFKGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLKTFEGHL 360

Query: 424 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 483
           DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC
Sbjct: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420

Query: 484 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 543
           GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY
Sbjct: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480

Query: 544 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 603
           IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD
Sbjct: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540

[Close]

BLAST of Spg037476 vs. NCBI nr
Match: XP_004146749.1 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis sativus] >XP_031742738.1 U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis sativus] >KGN47802.1 hypothetical protein Csa_003570 [Cucumis sativus])

HSP 1 Score: 1008.4 bits (2606), Expect = 3.3e-290
Identity = 516/540 (95.56%), Postives = 526/540 (97.41%), Query Frame = 0


Query: 64  MEVDDQNPASSAAESPETLPHGENGDPDNPAEPIQPAATLVIPPPIVPAIAPIPPPIIRP 123
           ME+DDQNPAS+AAESPETLP GEN + DNPAEP QPAAT VIPP IVPAIAPIPPPIIRP
Sbjct: 1   MEIDDQNPASTAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP 60

Query: 124 LAPLPSRPPLFRPSTTQNGELRTSDSDSEHDDLAPSRTAPGSTAEYEVSEESRLVRERQE 183
           LAPLPSRPPLFRP  TQNGELRTSDSDSEHD+LAPSRTAPGSTAEYE+SEESR  RER E
Sbjct: 61  LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPSRTAPGSTAEYEISEESRQARERHE 120

Query: 184 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 243
           KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG
Sbjct: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180

Query: 244 QLEKLMKVHEEEEAAATGGIEEAEEEVLQYPFYTEGSKALLEARIDIAKYSIVRAASRLE 303
           QLEKLMKVHEEEEAAATGG EEAEEEVLQYPFYTEGSKALL+ARIDIAKYSI+RA+SRLE
Sbjct: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240

Query: 304 RAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 363
           RAKRKRDDPDEDVEAEMDWALRQA SLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV
Sbjct: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300

Query: 364 AKLWSMPQVRKVSNFKGHTERVTDVIFSPVNECLVTASADRTARLWSAEGSLLQTFEGHL 423
           AKLWSMPQVRKVSNFKGHTERVTDV+FSPVNECL TASADRTARLWSAEGSLL+TFEGHL
Sbjct: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLKTFEGHL 360

Query: 424 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 483
           DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC
Sbjct: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420

Query: 484 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 543
           GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY
Sbjct: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480

Query: 544 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 603
           IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD
Sbjct: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540

[Close]

BLAST of Spg037476 vs. NCBI nr
Match: XP_008464716.1 (PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo] >XP_016903247.1 PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo] >XP_016903248.1 PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo] >XP_016903249.1 PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo])

HSP 1 Score: 1002.3 bits (2590), Expect = 2.3e-288
Identity = 513/540 (95.00%), Postives = 524/540 (97.04%), Query Frame = 0


Query: 64  MEVDDQNPASSAAESPETLPHGENGDPDNPAEPIQPAATLVIPPPIVPAIAPIPPPIIRP 123
           ME+DDQNPAS+AAESPETLP GEN + DNPAEP QPAAT VIPP IVPAIAPIPPPIIRP
Sbjct: 1   MEIDDQNPASTAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP 60

Query: 124 LAPLPSRPPLFRPSTTQNGELRTSDSDSEHDDLAPSRTAPGSTAEYEVSEESRLVRERQE 183
           LAPLPSRPPLFRP  TQNGELRTSDSDSEHD+LAP+RTAPGSTAEYE+SEESR  RER E
Sbjct: 61  LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPARTAPGSTAEYEISEESRQARERHE 120

Query: 184 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 243
           KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG
Sbjct: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180

Query: 244 QLEKLMKVHEEEEAAATGGIEEAEEEVLQYPFYTEGSKALLEARIDIAKYSIVRAASRLE 303
           QLEKLMKVHEEEEAAATGG EEAEEEVLQYPFYTEGSKALL+ARIDIAKYSI+RA+SRLE
Sbjct: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240

Query: 304 RAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 363
           RAKRKRDDPDEDVEAEMDWALRQA SLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV
Sbjct: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300

Query: 364 AKLWSMPQVRKVSNFKGHTERVTDVIFSPVNECLVTASADRTARLWSAEGSLLQTFEGHL 423
           AKLWSMPQVRKVSNFKGHTERVTDV+FSPVNECL TASADRTARLWS EGSLL+TFEGHL
Sbjct: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSPEGSLLKTFEGHL 360

Query: 424 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 483
           DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFH DGSLVSSC
Sbjct: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHQDGSLVSSC 420

Query: 484 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 543
           GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY
Sbjct: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480

Query: 544 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 603
           IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD
Sbjct: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540

[Close]

BLAST of Spg037476 vs. NCBI nr
Match: XP_022151320.1 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Momordica charantia])

HSP 1 Score: 992.6 bits (2565), Expect = 1.8e-285
Identity = 509/542 (93.91%), Postives = 524/542 (96.68%), Query Frame = 0


Query: 64  MEVDDQNPASSAAESPETLPHGEN-GDPDNPAEPIQPAATLVIPPPIVPAIAPI-PPPII 123
           MEVDDQNPAS++AESPETLP GEN  D D+P+EPIQPAA+ VIPPPIVPAIAPI PPP+I
Sbjct: 1   MEVDDQNPASTSAESPETLPDGENVVDLDSPSEPIQPAASSVIPPPIVPAIAPIPPPPVI 60

Query: 124 RPLAPLPSRPPLFRPSTTQNGELRTSDSDSEHDDLAPSRTAPGSTAEYEVSEESRLVRER 183
           RPLAPLPSRPPLFRP   QNGELRTSDSDSEHDDLAPSR APGS A+YEVSEESR VRER
Sbjct: 61  RPLAPLPSRPPLFRPPVAQNGELRTSDSDSEHDDLAPSRAAPGSAADYEVSEESRQVRER 120

Query: 184 QEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDA 243
           QEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDA
Sbjct: 121 QEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDA 180

Query: 244 EGQLEKLMKVHEEEEAAATGGIEEAEEEVLQYPFYTEGSKALLEARIDIAKYSIVRAASR 303
           EGQLEKL+K HEEEEAAAT G E+AEEEVLQYPFYTEGSKALL  R+DIAKYSIVRAASR
Sbjct: 181 EGQLEKLLKAHEEEEAAATAGTEDAEEEVLQYPFYTEGSKALLNTRLDIAKYSIVRAASR 240

Query: 304 LERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLS 363
           LERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLS
Sbjct: 241 LERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLS 300

Query: 364 GVAKLWSMPQVRKVSNFKGHTERVTDVIFSPVNECLVTASADRTARLWSAEGSLLQTFEG 423
           GVAKLWSMPQVRKVSNFKGHTERVTDV+FSPVNECL TASADRTARLWSAEGSLL+TFEG
Sbjct: 301 GVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLRTFEG 360

Query: 424 HLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVS 483
           HLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVS
Sbjct: 361 HLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVS 420

Query: 484 SCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKS 543
           SCGLDALAR+WDLRTGRS+LALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKS
Sbjct: 421 SCGLDALARIWDLRTGRSILALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKS 480

Query: 544 LYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDII 603
           LYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDII
Sbjct: 481 LYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDII 540

[Close]

BLAST of Spg037476 vs. NCBI nr
Match: XP_022999661.1 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucurbita maxima])

HSP 1 Score: 984.2 bits (2543), Expect = 6.6e-283
Identity = 505/541 (93.35%), Postives = 520/541 (96.12%), Query Frame = 0


Query: 64  MEVDDQNPASSAAESPETLPHGENGDPDNPAEPIQPAATLVIPPPIVPAIAPIPPPII-R 123
           M+VDDQNPAS+AAESPE LP GEN D DNPAEP+QPAAT VIP  IVP+IAPIPPP+I R
Sbjct: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR 60

Query: 124 PLAPLPSRPPLFRPSTTQNGELRTSDSDSEHDDLAPSRTAPGSTAEYEVSEESRLVRERQ 183
           PLAPLPSRP LFRP   QNGE+RTSDSDSEHD+LAPSR   GSTAEYEVSEESR VRERQ
Sbjct: 61  PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120

Query: 184 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 243
           EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE
Sbjct: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180

Query: 244 GQLEKLMKVHEEEEAAATGGIEEAEEEVLQYPFYTEGSKALLEARIDIAKYSIVRAASRL 303
           GQLEKL+KVHEEEEAAATGG EEAEEEVLQYPFYTEG KALL+ARIDIAKYSIVRAASRL
Sbjct: 181 GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSIVRAASRL 240

Query: 304 ERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 363
           ERAKRKRDDPDEDVEAEMDWALRQA SL+LDCSEIGDDRPLSGCSFSSDGKFLATSSLSG
Sbjct: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLILDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300

Query: 364 VAKLWSMPQVRKVSNFKGHTERVTDVIFSPVNECLVTASADRTARLWSAEGSLLQTFEGH 423
           VAK+WSMPQVRKVSNFKGHTERVTDVIFSPVNECL TASADRTARLWSAEGSLL+TFEGH
Sbjct: 301 VAKMWSMPQVRKVSNFKGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH 360

Query: 424 LDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSS 483
           LDRLARIAFHPSGKYLGTTSFDKTWRLWD+ETGVELLLQEGHSRSVYGI FHHDGSLVSS
Sbjct: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS 420

Query: 484 CGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSL 543
           CGLDALARVWDLRTGRSVLALEGHVKPVLGV+FSPNGYHLATGGEDNTCRIWDLRKKKSL
Sbjct: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKKSL 480

Query: 544 YIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 603
           YIIPAHSNL+SQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS
Sbjct: 481 YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540

[Close]

BLAST of Spg037476 vs. ExPASy Swiss-Prot
Match: O22212 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Arabidopsis thaliana OX=3702 GN=LIS PE=2 SV=1)

HSP 1 Score: 674.1 bits (1738), Expect = 1.9e-192
Identity = 339/501 (67.66%), Postives = 401/501 (80.04%), Query Frame = 0


Query: 104 VIPPPIVPAIAPIPPPIIRPLAPLPSRPPLFRPSTTQNGELRTSDSDSEHDDLAPSRTAP 163
           V+PP   P +APIP   + P  P+ +RPP FRP  +QNG ++TSDSDSE DD        
Sbjct: 38  VVPPSFPPPMAPIP---MMPHPPV-ARPPTFRPPVSQNGGVKTSDSDSESDD-------- 97

Query: 164 GSTAEYEVSEESRLVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGE 223
                 E+SEES+ VRERQEKA+Q+ L+KRRA+A+AVPTND AVR RLRRLGEPITLFGE
Sbjct: 98  ---EHIEISEESKQVRERQEKALQDLLVKRRAAAMAVPTNDKAVRDRLRRLGEPITLFGE 157

Query: 224 REMERRDRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGIEEAEEEVLQYPFYTEGSKAL 283
           +EMERR RL  ++ R D  GQL+KL+K HEE+        EE ++EVL+YPF+TEG K L
Sbjct: 158 QEMERRARLTQLLTRYDINGQLDKLVKDHEEDVTPK----EEVDDEVLEYPFFTEGPKEL 217

Query: 284 LEARIDIAKYSIVRAASRLERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPL 343
            EARI+IAK+S+ RAA R++RAKR+RDDPDED++AE  WAL+ A  + LDCS  GDDRPL
Sbjct: 218 REARIEIAKFSVKRAAVRIQRAKRRRDDPDEDMDAETKWALKHAKHMALDCSNFGDDRPL 277

Query: 344 SGCSFSSDGKFLATSSLSGVAKLWSMPQV-RKVSNFKGHTERVTDVIFSPVNECLVTASA 403
           +GCSFS DGK LAT SLSGV KLW MPQV   ++  K H ER TDV+FSPV++CL TASA
Sbjct: 278 TGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASA 337

Query: 404 DRTARLWSAEGSLLQTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQE 463
           DRTA+LW  +G+LLQTFEGHLDRLAR+AFHPSGKYLGTTS+DKTWRLWD+ TG ELLLQE
Sbjct: 338 DRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQE 397

Query: 464 GHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHL 523
           GHSRSVYGIAF  DG+L +SCGLD+LARVWDLRTGRS+L  +GH+KPV  V+FSPNGYHL
Sbjct: 398 GHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHL 457

Query: 524 ATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDF 583
           A+GGEDN CRIWDLR +KSLYIIPAH+NLVSQVKYEPQEGYFL TAS+DM   IWS RDF
Sbjct: 458 ASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDF 517

Query: 584 KPVKTLSGHEAKVTSLDIISD 604
             VK+L+GHE+KV SLDI +D
Sbjct: 518 SLVKSLAGHESKVASLDITAD 519

[Close]

BLAST of Spg037476 vs. ExPASy Swiss-Prot
Match: Q3MHE2 (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Bos taurus OX=9913 GN=PRPF4 PE=2 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 3.8e-108
Identity = 204/443 (46.05%), Postives = 285/443 (64.33%), Query Frame = 0


Query: 170 EVSEESRLVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERR 229
           EV E    + ERQ + + EF  ++RA  + V T+D  V+A LR LGEPITLFGE   ERR
Sbjct: 70  EVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERR 129

Query: 230 DRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGIEEAEEEVLQYPFYTEGSKALLEARID 289
           +RLR+I++ +  +     L K  +++E +      +  +E  Q  +Y EG  +L  AR+ 
Sbjct: 130 ERLRNILSVVGTDA----LKKTKKDDEKS------KKSKEEYQQTWYHEGPHSLKVARLW 189

Query: 290 IAKYSIVRAASRLERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFS 349
           IA YS+ RA  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS
Sbjct: 190 IANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFS 249

Query: 350 SDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVIFSPVNEC--------LVTAS 409
            + K LAT+  SG+ KLWS+P    +   +GH   V  ++F P +          L + +
Sbjct: 250 PNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCA 309

Query: 410 ADRTARLWSAEG-SLLQTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLL 469
           AD + +LWS +    +   EGH  R+AR+ +HPSG++LGTT +D++WRLWD+E   E+L 
Sbjct: 310 ADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQEEILH 369

Query: 470 QEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGY 529
           QEGHS  VY IAFH DGSL  + GLDA  RVWDLRTGR ++ LEGH+K + G++FSPNGY
Sbjct: 370 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY 429

Query: 530 HLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSAR 589
           H+ATG  DNTC++WDLR+++ +Y IPAH NLV+ VK+EP  G FL+T ++D TAKIW+  
Sbjct: 430 HIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHP 489

Query: 590 DFKPVKTLSGHEAKVTSLDIISD 604
            + P+KTL+GHE KV  LDI SD
Sbjct: 490 GWSPLKTLAGHEGKVMGLDISSD 502

[Close]

BLAST of Spg037476 vs. ExPASy Swiss-Prot
Match: Q5NVD0 (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Pongo abelii OX=9601 GN=PRPF4 PE=2 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 3.8e-108
Identity = 204/443 (46.05%), Postives = 285/443 (64.33%), Query Frame = 0


Query: 170 EVSEESRLVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERR 229
           EV E    + ERQ + + EF  ++RA  + V T+D  V+A LR LGEPITLFGE   ERR
Sbjct: 70  EVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERR 129

Query: 230 DRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGIEEAEEEVLQYPFYTEGSKALLEARID 289
           +RLR+I++ +  +     L K  +++E +      +  +E  Q  +Y EG  +L  AR+ 
Sbjct: 130 ERLRNILSVVGTDA----LKKTKKDDEKS------KKSKEEYQQTWYHEGPNSLKVARLW 189

Query: 290 IAKYSIVRAASRLERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFS 349
           IA YS+ RA  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS
Sbjct: 190 IANYSLPRAMKRLEEARLHKEIPETTRASQMQELHKSLRSLNNFCSQIGDDRPISYCHFS 249

Query: 350 SDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVIFSPVNEC--------LVTAS 409
            + K LAT+  SG+ KLWS+P    +   +GH   V  ++F P +          L + +
Sbjct: 250 PNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCA 309

Query: 410 ADRTARLWSAEG-SLLQTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLL 469
           AD + +LWS +    +   EGH  R+AR+ +HPSG++LGTT +D++WRLWD+E   E+L 
Sbjct: 310 ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILH 369

Query: 470 QEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGY 529
           QEGHS  VY IAFH DGSL  + GLDA  RVWDLRTGR ++ LEGH+K + G++FSPNGY
Sbjct: 370 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY 429

Query: 530 HLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSAR 589
           H+ATG  DNTC++WDLR+++ +Y IPAH NLV+ VK+EP  G FL+T ++D TAKIW+  
Sbjct: 430 HIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHP 489

Query: 590 DFKPVKTLSGHEAKVTSLDIISD 604
            + P+KTL+GHE KV  LDI SD
Sbjct: 490 GWSPLKTLAGHEGKVMGLDISSD 502

[Close]

BLAST of Spg037476 vs. ExPASy Swiss-Prot
Match: Q9DAW6 (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus OX=10090 GN=Prpf4 PE=1 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 6.5e-108
Identity = 204/443 (46.05%), Postives = 285/443 (64.33%), Query Frame = 0


Query: 170 EVSEESRLVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERR 229
           EV E    + ERQ + + EF  ++RA  + V T+D  V+A LR LGEPITLFGE   ERR
Sbjct: 70  EVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERR 129

Query: 230 DRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGIEEAEEEVLQYPFYTEGSKALLEARID 289
           +RLR+I++ +  +     L K  +++E +      +  +E  Q  +Y EG  +L  AR+ 
Sbjct: 130 ERLRNILSVVGTDA----LKKTKKDDEKS------KKSKEEYQQTWYHEGPNSLKVARLW 189

Query: 290 IAKYSIVRAASRLERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFS 349
           IA YS+ RA  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS
Sbjct: 190 IANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFS 249

Query: 350 SDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVIFSPVNEC--------LVTAS 409
            + K LAT+  SG+ KLWS+P    +   +GH   V  ++F P +          L + +
Sbjct: 250 PNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCA 309

Query: 410 ADRTARLWSAEG-SLLQTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLL 469
           AD + +LWS +    +   EGH  R+AR+ +HPSG++LGTT +D++WRLWD+E   E+L 
Sbjct: 310 ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILH 369

Query: 470 QEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGY 529
           QEGHS  VY IAFH DGSL  + GLDA  RVWDLRTGR ++ LEGH+K + G++FSPNGY
Sbjct: 370 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY 429

Query: 530 HLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSAR 589
           H+ATG  DNTC++WDLR+++ +Y IPAH NLV+ VK+EP  G FL+T ++D TAKIW+  
Sbjct: 430 HIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHP 489

Query: 590 DFKPVKTLSGHEAKVTSLDIISD 604
            + P+KTL+GHE KV  LDI SD
Sbjct: 490 GWSPLKTLAGHEGKVMGLDISSD 502

[Close]

BLAST of Spg037476 vs. ExPASy Swiss-Prot
Match: O43172 (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Homo sapiens OX=9606 GN=PRPF4 PE=1 SV=2)

HSP 1 Score: 388.7 bits (997), Expect = 1.6e-106
Identity = 213/493 (43.20%), Postives = 303/493 (61.46%), Query Frame = 0


Query: 124 LAPLPSRPPLFRPSTTQNGELRTSDSDS---EHDDLAPSRTAPG-STAEYEVSEESRLVR 183
           +AP+  +P ++  S  +    R +  +S     D L     A   +    EV E    + 
Sbjct: 21  VAPVVKKPHIYYGSLEEKERERLAKGESGILGKDGLKAGIEAGNINITSGEVFEIEEHIS 80

Query: 184 ERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARL 243
           ERQ + + EF  ++RA  + V T+D  V+A LR LGEPITLFGE   ERR+RLR+I++ +
Sbjct: 81  ERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNILSVV 140

Query: 244 DAEGQLEKLMKVHEEEEAAATGGIEEAEEEVLQYPFYTEGSKALLEARIDIAKYSIVRAA 303
             +     L K  +++E +      +  +E  Q  +Y EG  +L  AR+ IA YS+ RA 
Sbjct: 141 GTDA----LKKTKKDDEKS------KKSKEEYQQTWYHEGPNSLKVARLWIANYSLPRAM 200

Query: 304 SRLERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSS 363
            RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS + K LAT+ 
Sbjct: 201 KRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATAC 260

Query: 364 LSGVAKLWSMPQVRKVSNFKGHTERVTDVIFSPVNEC--------LVTASADRTARLWSA 423
            SG+ KLWS+P    +   +GH   V  ++F P +          L + +AD + +LWS 
Sbjct: 261 WSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSL 320

Query: 424 EG-SLLQTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYG 483
           +    +   EGH  R+AR+ +HPSG++LGTT +D++WRLWD+E   E+L QEGHS  VY 
Sbjct: 321 DSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYD 380

Query: 484 IAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNT 543
           IAFH DGSL  + GLDA  RVWDLRTGR ++ LEGH+K + G++FSPNGYH+ATG  DNT
Sbjct: 381 IAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNT 440

Query: 544 CRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSG 603
           C++WDLR+++ +Y IPAH NLV+ VK+EP  G FL+T ++D TAKIW+   + P+KTL+G
Sbjct: 441 CKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAG 500

[Close]

BLAST of Spg037476 vs. ExPASy TrEMBL
Match: A0A0A0KHD8 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G404170 PE=4 SV=1)

HSP 1 Score: 1008.4 bits (2606), Expect = 1.6e-290
Identity = 516/540 (95.56%), Postives = 526/540 (97.41%), Query Frame = 0


Query: 64  MEVDDQNPASSAAESPETLPHGENGDPDNPAEPIQPAATLVIPPPIVPAIAPIPPPIIRP 123
           ME+DDQNPAS+AAESPETLP GEN + DNPAEP QPAAT VIPP IVPAIAPIPPPIIRP
Sbjct: 1   MEIDDQNPASTAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP 60

Query: 124 LAPLPSRPPLFRPSTTQNGELRTSDSDSEHDDLAPSRTAPGSTAEYEVSEESRLVRERQE 183
           LAPLPSRPPLFRP  TQNGELRTSDSDSEHD+LAPSRTAPGSTAEYE+SEESR  RER E
Sbjct: 61  LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPSRTAPGSTAEYEISEESRQARERHE 120

Query: 184 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 243
           KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG
Sbjct: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180

Query: 244 QLEKLMKVHEEEEAAATGGIEEAEEEVLQYPFYTEGSKALLEARIDIAKYSIVRAASRLE 303
           QLEKLMKVHEEEEAAATGG EEAEEEVLQYPFYTEGSKALL+ARIDIAKYSI+RA+SRLE
Sbjct: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240

Query: 304 RAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 363
           RAKRKRDDPDEDVEAEMDWALRQA SLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV
Sbjct: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300

Query: 364 AKLWSMPQVRKVSNFKGHTERVTDVIFSPVNECLVTASADRTARLWSAEGSLLQTFEGHL 423
           AKLWSMPQVRKVSNFKGHTERVTDV+FSPVNECL TASADRTARLWSAEGSLL+TFEGHL
Sbjct: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLKTFEGHL 360

Query: 424 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 483
           DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC
Sbjct: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420

Query: 484 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 543
           GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY
Sbjct: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480

Query: 544 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 603
           IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD
Sbjct: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540

[Close]

BLAST of Spg037476 vs. ExPASy TrEMBL
Match: A0A1S4E4U8 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucumis melo OX=3656 GN=LOC103502534 PE=4 SV=1)

HSP 1 Score: 1002.3 bits (2590), Expect = 1.1e-288
Identity = 513/540 (95.00%), Postives = 524/540 (97.04%), Query Frame = 0


Query: 64  MEVDDQNPASSAAESPETLPHGENGDPDNPAEPIQPAATLVIPPPIVPAIAPIPPPIIRP 123
           ME+DDQNPAS+AAESPETLP GEN + DNPAEP QPAAT VIPP IVPAIAPIPPPIIRP
Sbjct: 1   MEIDDQNPASTAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP 60

Query: 124 LAPLPSRPPLFRPSTTQNGELRTSDSDSEHDDLAPSRTAPGSTAEYEVSEESRLVRERQE 183
           LAPLPSRPPLFRP  TQNGELRTSDSDSEHD+LAP+RTAPGSTAEYE+SEESR  RER E
Sbjct: 61  LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPARTAPGSTAEYEISEESRQARERHE 120

Query: 184 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 243
           KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG
Sbjct: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180

Query: 244 QLEKLMKVHEEEEAAATGGIEEAEEEVLQYPFYTEGSKALLEARIDIAKYSIVRAASRLE 303
           QLEKLMKVHEEEEAAATGG EEAEEEVLQYPFYTEGSKALL+ARIDIAKYSI+RA+SRLE
Sbjct: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240

Query: 304 RAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 363
           RAKRKRDDPDEDVEAEMDWALRQA SLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV
Sbjct: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300

Query: 364 AKLWSMPQVRKVSNFKGHTERVTDVIFSPVNECLVTASADRTARLWSAEGSLLQTFEGHL 423
           AKLWSMPQVRKVSNFKGHTERVTDV+FSPVNECL TASADRTARLWS EGSLL+TFEGHL
Sbjct: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSPEGSLLKTFEGHL 360

Query: 424 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 483
           DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFH DGSLVSSC
Sbjct: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHQDGSLVSSC 420

Query: 484 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 543
           GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY
Sbjct: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480

Query: 544 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 603
           IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD
Sbjct: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540

[Close]

BLAST of Spg037476 vs. ExPASy TrEMBL
Match: A0A6J1DAU7 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Momordica charantia OX=3673 GN=LOC111019283 PE=4 SV=1)

HSP 1 Score: 992.6 bits (2565), Expect = 8.9e-286
Identity = 509/542 (93.91%), Postives = 524/542 (96.68%), Query Frame = 0


Query: 64  MEVDDQNPASSAAESPETLPHGEN-GDPDNPAEPIQPAATLVIPPPIVPAIAPI-PPPII 123
           MEVDDQNPAS++AESPETLP GEN  D D+P+EPIQPAA+ VIPPPIVPAIAPI PPP+I
Sbjct: 1   MEVDDQNPASTSAESPETLPDGENVVDLDSPSEPIQPAASSVIPPPIVPAIAPIPPPPVI 60

Query: 124 RPLAPLPSRPPLFRPSTTQNGELRTSDSDSEHDDLAPSRTAPGSTAEYEVSEESRLVRER 183
           RPLAPLPSRPPLFRP   QNGELRTSDSDSEHDDLAPSR APGS A+YEVSEESR VRER
Sbjct: 61  RPLAPLPSRPPLFRPPVAQNGELRTSDSDSEHDDLAPSRAAPGSAADYEVSEESRQVRER 120

Query: 184 QEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDA 243
           QEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDA
Sbjct: 121 QEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDA 180

Query: 244 EGQLEKLMKVHEEEEAAATGGIEEAEEEVLQYPFYTEGSKALLEARIDIAKYSIVRAASR 303
           EGQLEKL+K HEEEEAAAT G E+AEEEVLQYPFYTEGSKALL  R+DIAKYSIVRAASR
Sbjct: 181 EGQLEKLLKAHEEEEAAATAGTEDAEEEVLQYPFYTEGSKALLNTRLDIAKYSIVRAASR 240

Query: 304 LERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLS 363
           LERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLS
Sbjct: 241 LERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLS 300

Query: 364 GVAKLWSMPQVRKVSNFKGHTERVTDVIFSPVNECLVTASADRTARLWSAEGSLLQTFEG 423
           GVAKLWSMPQVRKVSNFKGHTERVTDV+FSPVNECL TASADRTARLWSAEGSLL+TFEG
Sbjct: 301 GVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLRTFEG 360

Query: 424 HLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVS 483
           HLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVS
Sbjct: 361 HLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVS 420

Query: 484 SCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKS 543
           SCGLDALAR+WDLRTGRS+LALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKS
Sbjct: 421 SCGLDALARIWDLRTGRSILALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKS 480

Query: 544 LYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDII 603
           LYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDII
Sbjct: 481 LYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDII 540

[Close]

BLAST of Spg037476 vs. ExPASy TrEMBL
Match: A0A6J1KDQ7 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucurbita maxima OX=3661 GN=LOC111493950 PE=4 SV=1)

HSP 1 Score: 984.2 bits (2543), Expect = 3.2e-283
Identity = 505/541 (93.35%), Postives = 520/541 (96.12%), Query Frame = 0


Query: 64  MEVDDQNPASSAAESPETLPHGENGDPDNPAEPIQPAATLVIPPPIVPAIAPIPPPII-R 123
           M+VDDQNPAS+AAESPE LP GEN D DNPAEP+QPAAT VIP  IVP+IAPIPPP+I R
Sbjct: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR 60

Query: 124 PLAPLPSRPPLFRPSTTQNGELRTSDSDSEHDDLAPSRTAPGSTAEYEVSEESRLVRERQ 183
           PLAPLPSRP LFRP   QNGE+RTSDSDSEHD+LAPSR   GSTAEYEVSEESR VRERQ
Sbjct: 61  PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120

Query: 184 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 243
           EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE
Sbjct: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180

Query: 244 GQLEKLMKVHEEEEAAATGGIEEAEEEVLQYPFYTEGSKALLEARIDIAKYSIVRAASRL 303
           GQLEKL+KVHEEEEAAATGG EEAEEEVLQYPFYTEG KALL+ARIDIAKYSIVRAASRL
Sbjct: 181 GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSIVRAASRL 240

Query: 304 ERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 363
           ERAKRKRDDPDEDVEAEMDWALRQA SL+LDCSEIGDDRPLSGCSFSSDGKFLATSSLSG
Sbjct: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLILDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300

Query: 364 VAKLWSMPQVRKVSNFKGHTERVTDVIFSPVNECLVTASADRTARLWSAEGSLLQTFEGH 423
           VAK+WSMPQVRKVSNFKGHTERVTDVIFSPVNECL TASADRTARLWSAEGSLL+TFEGH
Sbjct: 301 VAKMWSMPQVRKVSNFKGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH 360

Query: 424 LDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSS 483
           LDRLARIAFHPSGKYLGTTSFDKTWRLWD+ETGVELLLQEGHSRSVYGI FHHDGSLVSS
Sbjct: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS 420

Query: 484 CGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSL 543
           CGLDALARVWDLRTGRSVLALEGHVKPVLGV+FSPNGYHLATGGEDNTCRIWDLRKKKSL
Sbjct: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKKSL 480

Query: 544 YIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 603
           YIIPAHSNL+SQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS
Sbjct: 481 YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540

[Close]

BLAST of Spg037476 vs. ExPASy TrEMBL
Match: A0A6J1G322 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucurbita moschata OX=3662 GN=LOC111450343 PE=4 SV=1)

HSP 1 Score: 981.1 bits (2535), Expect = 2.7e-282
Identity = 503/541 (92.98%), Postives = 519/541 (95.93%), Query Frame = 0


Query: 64  MEVDDQNPASSAAESPETLPHGENGDPDNPAEPIQPAATLVIPPPIVPAIAPIPPPII-R 123
           M+VDDQNPAS+AAESPE LP GEN D DNPAEP+QPAAT VIP  IVP+IAPIPPP+I R
Sbjct: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR 60

Query: 124 PLAPLPSRPPLFRPSTTQNGELRTSDSDSEHDDLAPSRTAPGSTAEYEVSEESRLVRERQ 183
           PLAPLPSRP LFRP   QNGE+RTSDSDSEHD+LAPSR   GSTAEYEVSEESR VRERQ
Sbjct: 61  PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120

Query: 184 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 243
           EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE
Sbjct: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180

Query: 244 GQLEKLMKVHEEEEAAATGGIEEAEEEVLQYPFYTEGSKALLEARIDIAKYSIVRAASRL 303
           GQLEKL+KVHEEEEAAATGG EEAEEEVLQYPFYTEG KALL+ARIDIAKYS+VRAASRL
Sbjct: 181 GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSVVRAASRL 240

Query: 304 ERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 363
           ERAKRKRDDPDEDVEAEMDWALRQA SLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG
Sbjct: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300

Query: 364 VAKLWSMPQVRKVSNFKGHTERVTDVIFSPVNECLVTASADRTARLWSAEGSLLQTFEGH 423
           VAK+WSMPQVRKVSNF GHTERVTDVIFSPVNECL TASADRTARLWSAEGSLL+TFEGH
Sbjct: 301 VAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH 360

Query: 424 LDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSS 483
           LDRLARIAFHPSGKYLGTTSFDKTWRLWD+ETGVELLLQEGHSRSVYGI FHHDGSLVSS
Sbjct: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS 420

Query: 484 CGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSL 543
           CGLDALARVWDLRTGRSVLALEGHVKPVLGV+FSPNGYHLATGGEDNTCRIWDLRKK+SL
Sbjct: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKRSL 480

Query: 544 YIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 603
           YIIPAHSNL+SQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS
Sbjct: 481 YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540

[Close]

BLAST of Spg037476 vs. TAIR 10
Match: AT2G41500.1 (WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related )

HSP 1 Score: 674.1 bits (1738), Expect = 1.4e-193
Identity = 339/501 (67.66%), Postives = 401/501 (80.04%), Query Frame = 0


Query: 104 VIPPPIVPAIAPIPPPIIRPLAPLPSRPPLFRPSTTQNGELRTSDSDSEHDDLAPSRTAP 163
           V+PP   P +APIP   + P  P+ +RPP FRP  +QNG ++TSDSDSE DD        
Sbjct: 38  VVPPSFPPPMAPIP---MMPHPPV-ARPPTFRPPVSQNGGVKTSDSDSESDD-------- 97

Query: 164 GSTAEYEVSEESRLVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGE 223
                 E+SEES+ VRERQEKA+Q+ L+KRRA+A+AVPTND AVR RLRRLGEPITLFGE
Sbjct: 98  ---EHIEISEESKQVRERQEKALQDLLVKRRAAAMAVPTNDKAVRDRLRRLGEPITLFGE 157

Query: 224 REMERRDRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGIEEAEEEVLQYPFYTEGSKAL 283
           +EMERR RL  ++ R D  GQL+KL+K HEE+        EE ++EVL+YPF+TEG K L
Sbjct: 158 QEMERRARLTQLLTRYDINGQLDKLVKDHEEDVTPK----EEVDDEVLEYPFFTEGPKEL 217

Query: 284 LEARIDIAKYSIVRAASRLERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPL 343
            EARI+IAK+S+ RAA R++RAKR+RDDPDED++AE  WAL+ A  + LDCS  GDDRPL
Sbjct: 218 REARIEIAKFSVKRAAVRIQRAKRRRDDPDEDMDAETKWALKHAKHMALDCSNFGDDRPL 277

Query: 344 SGCSFSSDGKFLATSSLSGVAKLWSMPQV-RKVSNFKGHTERVTDVIFSPVNECLVTASA 403
           +GCSFS DGK LAT SLSGV KLW MPQV   ++  K H ER TDV+FSPV++CL TASA
Sbjct: 278 TGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASA 337

Query: 404 DRTARLWSAEGSLLQTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQE 463
           DRTA+LW  +G+LLQTFEGHLDRLAR+AFHPSGKYLGTTS+DKTWRLWD+ TG ELLLQE
Sbjct: 338 DRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQE 397

Query: 464 GHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHL 523
           GHSRSVYGIAF  DG+L +SCGLD+LARVWDLRTGRS+L  +GH+KPV  V+FSPNGYHL
Sbjct: 398 GHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHL 457

Query: 524 ATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDF 583
           A+GGEDN CRIWDLR +KSLYIIPAH+NLVSQVKYEPQEGYFL TAS+DM   IWS RDF
Sbjct: 458 ASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDF 517

Query: 584 KPVKTLSGHEAKVTSLDIISD 604
             VK+L+GHE+KV SLDI +D
Sbjct: 518 SLVKSLAGHESKVASLDITAD 519

[Close]

BLAST of Spg037476 vs. TAIR 10
Match: AT2G05720.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 317.4 bits (812), Expect = 3.2e-86
Identity = 172/331 (51.96%), Postives = 200/331 (60.42%), Query Frame = 0


Query: 279 GSKALLEARIDIAKYSIVRAASRLERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIG 338
           G   L EARI+I K  I RAA R++R  R+R+DPDED  AE   AL+    +VL  S+ G
Sbjct: 2   GPTELREARIEITKDFIKRAALRIQRENRRRNDPDEDKNAETKLALKHCKDMVLGSSKFG 61

Query: 339 DDRPLSGCSFSSDGKFLATSSLSGVAKLWSMPQV-RKVSNFKGHTERVTDVIFSPV-NEC 398
           DDRPL+GCS S DGK L T SLSGV KLW +PQV  K+   KGH E VTDV+FS V +EC
Sbjct: 62  DDRPLTGCSLSRDGKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDEC 121

Query: 399 LVTASADRTARLWSAEGSLLQTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGV 458
           L TAS DRT ++W  +G+LLQTF+                                    
Sbjct: 122 LATASTDRTEKIWKTDGTLLQTFK------------------------------------ 181

Query: 459 ELLLQEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFS 518
                                   +S G D+LARVWDLRT R++L  +GH+K VL V FS
Sbjct: 182 ------------------------ASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFS 241

Query: 519 PNGYHLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKI 578
           PNGYHLA+GGEDN CRIWDLR +K LYIIPAH NLVSQVKYEPQE YFL TAS DM   I
Sbjct: 242 PNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNI 272

Query: 579 WSARDFKPVKTLSGHEAKVTSLDIISDIPSR 608
           WS RDF  VK+L GHE+KV SLDI  D  SR
Sbjct: 302 WSGRDFSLVKSLVGHESKVASLDIAVDSSSR 272

[Close]

BLAST of Spg037476 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 160.2 bits (404), Expect = 6.6e-39
Identity = 92/268 (34.33%), Postives = 135/268 (50.37%), Query Frame = 0


Query: 340 DRPLSGCSFSSDGKFLATSSLSGVAKLWSM-----PQVRKVSNFKGHTERVTDVIFSPVN 399
           +R +S   FSSDG+ LA++S     + +++     P    V  F GH   ++DV FS   
Sbjct: 24  NRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDA 83

Query: 400 ECLVTASADRTARLWSAE-GSLLQTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVE 459
             +V+AS D+T +LW  E GSL++T  GH +    + F+P    + + SFD+T R+WDV 
Sbjct: 84  RFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVT 143

Query: 460 TGVELLLQEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLAL-EGHVKPVLG 519
           TG  L +   HS  V  + F+ DGSL+ S   D L R+WD  TG  V  L +    PV  
Sbjct: 144 TGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSF 203

Query: 520 VSFSPNGYHLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVK--YEPQEGYFLVTASF 579
           V FSPNG  +  G  DNT R+W++   K L     H N    +   +    G  +V+ S 
Sbjct: 204 VRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSE 263

Query: 580 DMTAKIWSARDFKPVKTLSGHEAKVTSL 599
           D    +W     K ++ L GH   V ++
Sbjct: 264 DNCVHMWELNSKKLLQKLEGHTETVMNV 291

[Close]

BLAST of Spg037476 vs. TAIR 10
Match: AT5G25150.1 (TBP-associated factor 5 )

HSP 1 Score: 138.3 bits (347), Expect = 2.7e-32
Identity = 74/207 (35.75%), Postives = 105/207 (50.72%), Query Frame = 0


Query: 337 IGDDRPLSGCSFSSDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVIFSPVNEC 396
           +G   P+   +FS  G F+ +SS     +LWS      +  +KGH   V D  FSP    
Sbjct: 415 LGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHY 474

Query: 397 LVTASADRTARLWSAEG-SLLQTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETG 456
             + S DRTAR+WS +    L+   GHL  +  + +HP+  Y+ T S DKT RLWDV+TG
Sbjct: 475 FASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTG 534

Query: 457 VELLLQEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSF 516
             + +  GH   V  +A   DG  ++S   D    +WDL T R +  L GH   V  +S+
Sbjct: 535 ECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSY 594

Query: 517 SPNGYHLATGGEDNTCRIWDLRKKKSL 543
           S  G  LA+G  D T ++WD+     L
Sbjct: 595 SGEGSLLASGSADCTVKLWDVTSSTKL 621

[Close]

BLAST of Spg037476 vs. TAIR 10
Match: AT4G02730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 134.0 bits (336), Expect = 5.0e-31
Identity = 73/266 (27.44%), Postives = 129/266 (48.50%), Query Frame = 0


Query: 338 GDDRPLSGCSFSSDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVIFSPVNECL 397
           G    +S   FS+DG  LA++S+     LWS      +  ++GH+  ++D+ +S  +   
Sbjct: 41  GHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYT 100

Query: 398 VTASADRTARLWSAEG--SLLQTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETG 457
            +AS D T R+W A      L+   GH + +  + F+P    + + SFD+T R+W+V+TG
Sbjct: 101 CSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTG 160

Query: 458 VELLLQEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLG-VS 517
             + + + HS  +  + F+ DGSL+ S   D   ++WD + G  +  L     P +    
Sbjct: 161 KCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAK 220

Query: 518 FSPNGYHLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQV--KYEPQEGYFLVTASFDM 577
           FSPNG  +     D+T ++ +    K L +   H+N V  +   +    G ++V+ S D 
Sbjct: 221 FSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDN 280

Query: 578 TAKIWSARDFKPVKTLSGHEAKVTSL 599
              +W  +    ++ L GH   V S+
Sbjct: 281 CVYLWDLQARNILQRLEGHTDAVISV 306

The following BLAST results are available for this feature:

BLAST of Spg037476 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885479.1	1.3e-291	96.30	U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Benincasa hispida] >XP_...	[more]
XP_004146749.1	3.3e-290	95.56	U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis sativus] >XP_03...	[more]
XP_008464716.1	2.3e-288	95.00	PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo...	[more]
XP_022151320.1	1.8e-285	93.91	U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Momordica charantia]	[more]
XP_022999661.1	6.6e-283	93.35	U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucurbita maxima]	[more]

BLAST of Spg037476 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22212	1.9e-192	67.66	U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Arabidopsis thaliana ...	[more]
Q3MHE2	3.8e-108	46.05	U4/U6 small nuclear ribonucleoprotein Prp4 OS=Bos taurus OX=9913 GN=PRPF4 PE=2 S...	[more]
Q5NVD0	3.8e-108	46.05	U4/U6 small nuclear ribonucleoprotein Prp4 OS=Pongo abelii OX=9601 GN=PRPF4 PE=2...	[more]
Q9DAW6	6.5e-108	46.05	U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus OX=10090 GN=Prpf4 PE=...	[more]
O43172	1.6e-106	43.20	U4/U6 small nuclear ribonucleoprotein Prp4 OS=Homo sapiens OX=9606 GN=PRPF4 PE=1...	[more]

BLAST of Spg037476 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHD8	1.6e-290	95.56	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G...	[more]
A0A1S4E4U8	1.1e-288	95.00	U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucumis melo OX=3656 ...	[more]
A0A6J1DAU7	8.9e-286	93.91	U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Momordica charantia O...	[more]
A0A6J1KDQ7	3.2e-283	93.35	U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucurbita maxima OX=3...	[more]
A0A6J1G322	2.7e-282	92.98	U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucurbita moschata OX...	[more]

BLAST of Spg037476 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41500.1	1.4e-193	67.66	WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related	[more]
AT2G05720.1	3.2e-86	51.96	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G49660.1	6.6e-39	34.33	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G25150.1	2.7e-32	35.75	TBP-associated factor 5	[more]
AT4G02730.1	5.0e-31	27.44	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 238..269
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..99
None	No IPR available	PANTHER	PTHR19846	WD40 REPEAT PROTEIN	coord: 167..604
None	No IPR available	PANTHER	PTHR19846:SF3	BNAC04G01920D PROTEIN	coord: 167..604
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 378..410 score: 11.207411
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 545..578 score: 9.151057
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 503..537 score: 13.2374
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 461..498 score: 10.917412
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 419..455 score: 10.917412
None	No IPR available	CDD	cd00200	WD40	coord: 342..614 e-value: 1.06206E-78 score: 253.026
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 522..536 score: 38.39 coord: 397..411 score: 36.01 coord: 438..452 score: 37.95
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 496..535 e-value: 4.4E-11 score: 52.8 coord: 412..451 e-value: 9.1E-8 score: 41.8 coord: 538..578 e-value: 2.1E-4 score: 30.6 coord: 327..368 e-value: 0.014 score: 24.6 coord: 371..410 e-value: 2.3E-8 score: 43.8 coord: 581..620 e-value: 130.0 score: 3.6 coord: 454..493 e-value: 2.5E-6 score: 37.0
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 462..493 e-value: 7.8E-4 score: 20.2 coord: 500..535 e-value: 8.0E-9 score: 36.0 coord: 413..451 e-value: 2.3E-4 score: 21.9 coord: 375..410 e-value: 6.7E-5 score: 23.6
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 378..410 score: 13.516088
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 503..544 score: 16.958164
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 461..502 score: 14.251289
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 419..460 score: 13.482671
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 545..587 score: 11.878597
IPR014906	Pre-mRNA processing factor 4 (PRP4)-like	SMART	SM00500	pr04_2	coord: 202..255 e-value: 5.3E-18 score: 75.8
IPR014906	Pre-mRNA processing factor 4 (PRP4)-like	PFAM	PF08799	PRP4	coord: 207..234 e-value: 1.6E-12 score: 46.7
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 322..503 e-value: 2.8E-49 score: 169.7
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 504..613 e-value: 1.2E-28 score: 101.9
IPR036285	PRP4-like superfamily	GENE3D	4.10.280.110		coord: 177..247 e-value: 1.5E-14 score: 55.2
IPR036285	PRP4-like superfamily	SUPERFAMILY	158230	PRP4-like	coord: 184..240
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 480..494
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 522..536
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 438..452
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 337..603

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg037476.1	Spg037476.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0046540	U4/U6 x U5 tri-snRNP complex
molecular_function	GO:0005515	protein binding
molecular_function	GO:0030621	U4 snRNA binding
molecular_function	GO:0017070	U6 snRNA binding