Spg037467 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGCTGTCGAGGTCGAGTTTTGCGGAAGTTCCCATCACCCCCATCAGCAGGCCGAACACAATCGAGATGTCGCAGGAGAGAAAGAGGAGGAGGGGGTCGTACGAAGTAGAGGCCCTAGAGACCATGAGAACATCGATTGAAATGCAGACCACTCAGTTCACGAAGATAGCAGACTGGCCAAACTCTCAGGATGCAAAGGAGTCTTCATGTCGTGTTAGAGTGTCAGATCTGCTCTTAGGGCTTCTTAAGCTGACGGATGATGAGAGAGTGGACCTGATGAAGATTCTCTTCCTAGACCCGAAGATGAAGAACATGTTACTCTCCGTCCCACCTCCCCTGAAACTTCGATTCTGTCGAAGTTTATTGAATGACTACCGGTGA ATGTCGCTGTCGAGGTCGAGTTTTGCGGAAGTTCCCATCACCCCCATCAGCAGGCCGAACACAATCGAGATGTCGCAGGAGAGAAAGAGGAGGAGGGGGTCGTACGAAGTAGAGGCCCTAGAGACCATGAGAACATCGATTGAAATGCAGACCACTCAGTTCACGAAGATAGCAGACTGGCCAAACTCTCAGGATGCAAAGGAGTCTTCATGTCGTGTTAGAGTGTCAGATCTGCTCTTAGGGCTTCTTAAGCTGACGGATGATGAGAGAGTGGACCTGATGAAGATTCTCTTCCTAGACCCGAAGATGAAGAACATGTTACTCTCCGTCCCACCTCCCCTGAAACTTCGATTCTGTCGAAGTTTATTGAATGACTACCGGTGA ATGTCGCTGTCGAGGTCGAGTTTTGCGGAAGTTCCCATCACCCCCATCAGCAGGCCGAACACAATCGAGATGTCGCAGGAGAGAAAGAGGAGGAGGGGGTCGTACGAAGTAGAGGCCCTAGAGACCATGAGAACATCGATTGAAATGCAGACCACTCAGTTCACGAAGATAGCAGACTGGCCAAACTCTCAGGATGCAAAGGAGTCTTCATGTCGTGTTAGAGTGTCAGATCTGCTCTTAGGGCTTCTTAAGCTGACGGATGATGAGAGAGTGGACCTGATGAAGATTCTCTTCCTAGACCCGAAGATGAAGAACATGTTACTCTCCGTCCCACCTCCCCTGAAACTTCGATTCTGTCGAAGTTTATTGAATGACTACCGGTGA MSLSRSSFAEVPITPISRPNTIEMSQERKRRRGSYEVEALETMRTSIEMQTTQFTKIADWPNSQDAKESSCRVRVSDLLLGLLKLTDDERVDLMKILFLDPKMKNMLLSVPPPLKLRFCRSLLNDYR Homology
BLAST of Spg037467 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK08388.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 62.8 bits (151), Expect = 2.5e-06 Identity = 38/101 (37.62%), Postives = 52/101 (51.49%), Query Frame = 0
BLAST of Spg037467 vs. NCBI nr
Match: XP_022158565.1 (uncharacterized protein LOC111025018 [Momordica charantia]) HSP 1 Score: 62.4 bits (150), Expect = 3.3e-06 Identity = 39/114 (34.21%), Postives = 59/114 (51.75%), Query Frame = 0
BLAST of Spg037467 vs. NCBI nr
Match: KAA0066604.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK14214.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 60.1 bits (144), Expect = 1.6e-05 Identity = 36/101 (35.64%), Postives = 52/101 (51.49%), Query Frame = 0
BLAST of Spg037467 vs. NCBI nr
Match: KAA0031678.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK04432.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 57.4 bits (137), Expect = 1.1e-04 Identity = 35/101 (34.65%), Postives = 49/101 (48.51%), Query Frame = 0
BLAST of Spg037467 vs. NCBI nr
Match: KAA0033290.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK14818.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 54.7 bits (130), Expect = 6.8e-04 Identity = 33/101 (32.67%), Postives = 51/101 (50.50%), Query Frame = 0
BLAST of Spg037467 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.2e-06 Identity = 38/101 (37.62%), Postives = 52/101 (51.49%), Query Frame = 0
BLAST of Spg037467 vs. ExPASy TrEMBL
Match: A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.2e-06 Identity = 38/101 (37.62%), Postives = 52/101 (51.49%), Query Frame = 0
BLAST of Spg037467 vs. ExPASy TrEMBL
Match: A0A6J1DW73 (uncharacterized protein LOC111025018 OS=Momordica charantia OX=3673 GN=LOC111025018 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.6e-06 Identity = 39/114 (34.21%), Postives = 59/114 (51.75%), Query Frame = 0
BLAST of Spg037467 vs. ExPASy TrEMBL
Match: A0A5D3CT52 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G00400 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 7.9e-06 Identity = 36/101 (35.64%), Postives = 52/101 (51.49%), Query Frame = 0
BLAST of Spg037467 vs. ExPASy TrEMBL
Match: A0A5D3BZU3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00280 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 5.1e-05 Identity = 35/101 (34.65%), Postives = 49/101 (48.51%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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