Spg037394 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACATGCTCCAAAGAAGGTTGGGGAAAGGCACAGGAGAAATTTCAAAGGCTTGCATCTAGTAGCTTGAAGACCTATGAGAGGCCGGAGTCCTCTTTGCTCAAATTGTAAAAGAAGGCAAAACATGTGAGGTTCTGGAGGCAAAGAGCGAGGATGAAAAGGACACGTCTTTAAAGACTCAAAACTTGCTTTGGGTTACTCATCTGTGTAAAACCTTTTACGGGAATATGACGATGGTTCTATGAGAGGATGTTCAAAAGCAACAAGGAATGCTTATCTTCGACAAGTGGGCGATTGGTAAATTTGCTGTGAATTTTTTGCCCTAGAATTTTTTCCTTATTGGTAGATGGTCTTTCTTCTATATAAGAAGACCTCGTATTTGATTCAAAGAGTGAGGAGAAATACAATGTTTTAATTTCTTCCCAAAATTCTAGTGTTTTTTTTGTTTATTGAGGTTTATCATCCCCCCCCCCCTCCGAAATGCTCCCTCCTCTCTCCCTTCTCCTCTCCTGGTGCTAGTCTCCACCTCCATTCTCAATCATCTTTTTTCTACCCTCCACCTCCGTTTCTAGCCTTGAATCGCCACTTTTCTCCCCTCCACCTCCATTCTTAGCCTTCACAGTCGTTCGTTACTTATCTGGGAACATTTTCACTAGATTGTTGATCCTTGGTTACATCTCATTCATCACTGCAAGGTTCTTAATTCCTTCTTTTGCATCTGGCAAAAGGAGGATCAATTTTATGCGGAAGATTTCTCAAACAATATGGTATTCCCGCTCTTTGGTTCGCAATTGCGATGGTTTGAAAGCTCCATTGTCGAACTTCTTCACCAACCAGAAGGACGATATTATTCAGGAAATTTCATGATGATTCAGGAATAATTCATCTAATGAAAGTAAAGTCTCAATTAGGATGGTTATTTCGGTGTGTTGTTTGGCCTTCTTCAAGAAAAAAGGATGGCTATCCTTCTCGAAAATGGTGAATGGTACAATTAGAATTTTTTGTGATAGTCCTACCTTTTCTGAAGCATCATCTGTGCCAAAAAGGTTGTCAAAGCTAGCAACTAAGAGTTATGATGAAGTAGATGAGAAACCTTGTAGGTTGCTTTCGAATTCTAGTGATATGGTTTTGAGAAGCAAGAGATCAGATAATTCTGCTGGGCATTATTGGGTTCAAAAGAGTCATGAAGTTTTGCCGCTGAATTGTGATGAACTTTGGGTGGTTTCCAGATTATTTGCTCATAACGAATGGAAAGAAATTGCAGCAACTTTGGAATTTCATTTCAAGACCAAGGTGGTGATCAATCCATTATTTGCTGATAAGGCTTTGATTAAATTTGTTGATGACACTAAGTTTAAAGATTCGAATTCATCAGGAAAATGGCAGGCTTATGGTGATTTTCACTTGCTCATTGAGAAGGTCTAATAGTATCCATAGCAATCCGAGTGTGATAGCGGGGTATGGTGGCTGGATTTCAATTAAAAATCTTCCCCTTGACTATTGGTGTCGCAAGTCTTTTGAAGCTATAGGGGTTTATTTCGGAGGTCTCGTAAGTATCTCTTCTGATTAATTGTTCAGAAGCTCGAATTCAAAGTTAAGCGTAATCTATGTGGTTTTATGTCGCCTACTATTAGAATCAGGGATAAAGTGAGAGGAAATATTTTTCTTCATTTTGGTGATATAGTCGCCTTAGATCCACCTAACATTGTTCGTGGTGATCTTGTGTTAGATGATTTCTCAAATCCCATGGATCTTTTCCGTTCACAGCGGTCATGTTGGATGAAGGAGCTATCAAGACTCCATTGCAAAATGAATTAG ATGACATGCTCCAAAGAAGGTTGGGGAAAGGCACAGGAGAAATTTCAAAGGCTTGCATCTAGTAGCTTGAAGACCTATGAGAGGCCGGAGTCCTCTTTGCTCAAATTGAATAATTCATCTAATGAAAGTAAAGTCTCAATTAGGATGGTTATTTCGGTGTGTTGTTTGGCCTTCTTCAAGAAAAAAGGATGGCTATCCTTCTCGAAAATGGTGAATGGTACAATTAGAATTTTTTGTGATAGTCCTACCTTTTCTGAAGCATCATCTGTGCCAAAAAGGTTGTCAAAGCTAGCAACTAAGAGTTATGATGAAGTAGATGAGAAACCTTGTAGGTTGCTTTCGAATTCTAGTGATATGGTTTTGAGAAGCAAGAGATCAGATAATTCTGCTGGGCATTATTGGGTTCAAAAGAGTCATGAAGTTTTGCCGCTGAATTGTGATGAACTTTGGGTGGTTTCCAGATTATTTGCTCATAACGAATGGAAAGAAATTGCAGCAACTTTGGAATTTCATTTCAAGACCAAGGTGGTGATCAATCCATTATTTGCTGATAAGGCTTTGATTAAATTTGTTGATGACACTAAGTTTAAAGATTCGAATTCATCAGGAAAATGGCAGGCTTATGGTGATTTTCACTTGCTCATTGAGAAGAAGCTCGAATTCAAAGTTAAGCGTAATCTATGTGGTTTTATGTCGCCTACTATTAGAATCAGGGATAAAGTGAGAGGAAATATTTTTCTTCATTTTGGTGATATAGTCGCCTTAGATCCACCTAACATTGTTCGTGGTGATCTTGTGTTAGATGATTTCTCAAATCCCATGGATCTTTTCCGTTCACAGCGGTCATGTTGGATGAAGGAGCTATCAAGACTCCATTGCAAAATGAATTAG ATGACATGCTCCAAAGAAGGTTGGGGAAAGGCACAGGAGAAATTTCAAAGGCTTGCATCTAGTAGCTTGAAGACCTATGAGAGGCCGGAGTCCTCTTTGCTCAAATTGAATAATTCATCTAATGAAAGTAAAGTCTCAATTAGGATGGTTATTTCGGTGTGTTGTTTGGCCTTCTTCAAGAAAAAAGGATGGCTATCCTTCTCGAAAATGGTGAATGGTACAATTAGAATTTTTTGTGATAGTCCTACCTTTTCTGAAGCATCATCTGTGCCAAAAAGGTTGTCAAAGCTAGCAACTAAGAGTTATGATGAAGTAGATGAGAAACCTTGTAGGTTGCTTTCGAATTCTAGTGATATGGTTTTGAGAAGCAAGAGATCAGATAATTCTGCTGGGCATTATTGGGTTCAAAAGAGTCATGAAGTTTTGCCGCTGAATTGTGATGAACTTTGGGTGGTTTCCAGATTATTTGCTCATAACGAATGGAAAGAAATTGCAGCAACTTTGGAATTTCATTTCAAGACCAAGGTGGTGATCAATCCATTATTTGCTGATAAGGCTTTGATTAAATTTGTTGATGACACTAAGTTTAAAGATTCGAATTCATCAGGAAAATGGCAGGCTTATGGTGATTTTCACTTGCTCATTGAGAAGAAGCTCGAATTCAAAGTTAAGCGTAATCTATGTGGTTTTATGTCGCCTACTATTAGAATCAGGGATAAAGTGAGAGGAAATATTTTTCTTCATTTTGGTGATATAGTCGCCTTAGATCCACCTAACATTGTTCGTGGTGATCTTGTGTTAGATGATTTCTCAAATCCCATGGATCTTTTCCGTTCACAGCGGTCATGTTGGATGAAGGAGCTATCAAGACTCCATTGCAAAATGAATTAG MTCSKEGWGKAQEKFQRLASSSLKTYERPESSLLKLNNSSNESKVSIRMVISVCCLAFFKKKGWLSFSKMVNGTIRIFCDSPTFSEASSVPKRLSKLATKSYDEVDEKPCRLLSNSSDMVLRSKRSDNSAGHYWVQKSHEVLPLNCDELWVVSRLFAHNEWKEIAATLEFHFKTKVVINPLFADKALIKFVDDTKFKDSNSSGKWQAYGDFHLLIEKKLEFKVKRNLCGFMSPTIRIRDKVRGNIFLHFGDIVALDPPNIVRGDLVLDDFSNPMDLFRSQRSCWMKELSRLHCKMN Homology
BLAST of Spg037394 vs. NCBI nr
Match: KAA0047189.1 (hypothetical protein E6C27_scaffold83G00690 [Cucumis melo var. makuwa] >TYK29739.1 hypothetical protein E5676_scaffold1280G00090 [Cucumis melo var. makuwa]) HSP 1 Score: 110.9 bits (276), Expect = 1.9e-20 Identity = 63/181 (34.81%), Postives = 92/181 (50.83%), Query Frame = 0
BLAST of Spg037394 vs. NCBI nr
Match: TYJ99818.1 (kinesin heavy chain-like [Cucumis melo var. makuwa]) HSP 1 Score: 109.8 bits (273), Expect = 4.2e-20 Identity = 61/163 (37.42%), Postives = 94/163 (57.67%), Query Frame = 0
BLAST of Spg037394 vs. NCBI nr
Match: XP_038904899.1 (uncharacterized protein LOC120091119 isoform X2 [Benincasa hispida]) HSP 1 Score: 72.0 bits (175), Expect = 9.6e-09 Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 0
BLAST of Spg037394 vs. NCBI nr
Match: TYK28792.1 (pseudouridylate synthase 7-like protein isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 70.5 bits (171), Expect = 2.8e-08 Identity = 34/65 (52.31%), Postives = 45/65 (69.23%), Query Frame = 0
BLAST of Spg037394 vs. NCBI nr
Match: TYK16775.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 66.2 bits (160), Expect = 5.3e-07 Identity = 32/86 (37.21%), Postives = 50/86 (58.14%), Query Frame = 0
BLAST of Spg037394 vs. ExPASy TrEMBL
Match: A0A5A7U128 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1280G00090 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 9.1e-21 Identity = 63/181 (34.81%), Postives = 92/181 (50.83%), Query Frame = 0
BLAST of Spg037394 vs. ExPASy TrEMBL
Match: A0A5D3BNW8 (Kinesin heavy chain-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold446G00200 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 2.0e-20 Identity = 61/163 (37.42%), Postives = 94/163 (57.67%), Query Frame = 0
BLAST of Spg037394 vs. ExPASy TrEMBL
Match: A0A5D3DYX0 (Pseudouridylate synthase 7-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G001570 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.4e-08 Identity = 34/65 (52.31%), Postives = 45/65 (69.23%), Query Frame = 0
BLAST of Spg037394 vs. ExPASy TrEMBL
Match: A0A5D3CZ35 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00310 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 2.6e-07 Identity = 32/86 (37.21%), Postives = 50/86 (58.14%), Query Frame = 0
BLAST of Spg037394 vs. ExPASy TrEMBL
Match: A0A5A7SLN9 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold134G00330 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 5.7e-07 Identity = 31/76 (40.79%), Postives = 47/76 (61.84%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|