Spg037391 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg037391
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCyclin family protein
Locationscaffold8: 1245926 .. 1252321 (+)
RNA-Seq ExpressionSpg037391
SyntenySpg037391
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTCAGTTGGTGGTGAAGGCCGGCGGTGGTTGGCAGAGACGGATGGTCGAGATGGTTGGCGGTGTAAGCTTGCACAGTGAAGATGAAGACTGCTTGAGTAAAAAGCTGAACATTAGCCACTATGATGACTTTTTTCATGTGAAAATTGGGTGTTAAGCAGGGTTAAAAATACAGTCTTGTTTATCAGTCCCCTTTTCTATCTTTGGAAGGAAATGGGCCTCACTTTTTTTTTTTCTTGAATCCAGCCCATCAAGCAGCCTATTATCCCCCTTTCTTCTGGATTCTTCTCCCTGTTGATGTTGTGGGTTAGTTTTCCTTCTTCAATGGCCCACTCACGACCCTTTCTCCCTAATAGTTGCCTTGATGCCTTCTTCGTCCCTTCCTTTGCAGCCAAACCCTCCTTTGCTGCCGGTAATGGCCTTTGTCTGCCTCACCTCCTGTTGATTCACCATCTTTAAGTCGTCGCCTCCAAATTTTTCTCTCTAACCAACTTCACTGTCCGTGACGGTCTTCGTTGGCCGCTTCCCCCATTTTCTCACCCAAACACGGTTCTTCAATTTTTCTTCTCCTACTTGATAATCTCTTACGTCGTCGGCACCTCCCTTGGATTTTCAACAACATTCGTTGTCGGTATCTCCCTTGCAATTCCAACTCCGTCACCTTGAACATTTTTTCAGCTTGCTTCTCGGATTTCAACCACATCTTTCTCTACTCTTTCCACCCTTTCTTCTAGTTGTCTTTGTGGCATTTTTCTAGGATGAACGTGCTCTGATACCAATTTGTTAGGTATCCAAACTAAGAAAAGATACCAAACACTAATATATTATATTGCAATATCGAAACGAAGTTACAATATAAAATCAATAGCCTTTCGAGAGGGCTAACTCTCTCCCAAGTCCCACTATGAGACAATACCAAAATTCTCCACCCACTTCCTAATTCTTCCCCTATTTATAACCAAGGCACAACCAAGACTCCCCAACTATTTACTGTTATACCCTTACTTATCTTCTATTACTATTCCCCATATATACCTAACTAGTACTCTCACAGAACTCAACTATGATATTCCTCCATATAATTAGCTACACATCTATTTCCTACCTACGTTTATGATACTATTGATATAGAATTGCTCGTAATTAGTTGGAAGAAAATGGTCCTTCATAAGCCAAAGCATTCTTTGCTAGTTTCGAATAGGTCTTTTACCGATCCTTTTCCTATTCATTGGAAGCTGATCCCACCAAGCCAAGGCACCCGATCTTAGTTTTAAAGTAACAAGGTTAACCTTCTTTTCTTTGGGCATGTTCAAATAAAAAAAAACCTCAAGATCAATTTTCCCATTGAATACTGGTAAGTCAATCTTCATTTCATTTTGTAGTCATGTGGTGGTTGTTCTGGATCAATTTTCCCATTGAACTTGCGCTCGATTCTTCTCCTTGACATCTCCTTACTAAATCCCCTTCGTCATTTAAAAACTTGGAATCTTGATACACCATTTGATTTTCTTGGTTTCTTTGAATGATTTTGAGGTTTAGTTCTTGTCTATTTTGGTTTCTTTCGTAGCAATCGTCTCTTTCTTTAAGGTTGAGTCTAGTTTCTTCTTCCAAATTTTGACGCACTTGTTCAGGTTGTTGTTCTCGAGTTAATTGTTCAAGTTGCAGTGCCATAATTTCAATCATCAAATCTCTCAAGGATCCTTCAGGCTTGATGAAGGGCCTACCTCACGCCCTTTACTGGATTGGACTCTGCTCTTTCCAGCCATTAGGCCCCAAAATTGGATGTCTGATACCAATTTGGTGCAAACGAAAGGATTAAAGTTTTATTGAAAATGATCTAAACCTTTCTTAATGGGAAAGGTTGATATTTATACAACCTAAAACCAATAGGTACAACGGCTAGCTAAAACCTACTAACTACCAGATGAATCTTAAAACAAATCCATAGGCCCATAAATGTGGCCCAAAACAGAACAGGTAAAAGCTATTTAACCTAGTAAAAATTACAGAAAGCTGAAAGGCCTACACTTTTTGTGAGAAACACATCCTCGTTGTTCTTTTAGCAATTGCCAATACTGGTTCACGTATTTAAGTGGAAATTCACCTGTTTTATGTGCTCTTTTAGGGAGCAGATATATTTTTTGATCTTTTATGCTTTCTGTATTTAATTTATAATTTTTTTTCCATCGACAAGTTATTGTTATGACGTTCAATCATTTTTTCAGGGTTGTTGCAACTGCTATTACATATATGAGACGTGTTTACACCAGGTATAGTAAAATTTTGTCCCAGAATTGAAAAAACTCATCAAGTCATGGACTCTTATCTGTTGTTTTAGTTTGATATTAATCCTTTGACTTTTGTAAGTAGAAATGGTCTCAATGTACACAGTTGAGATGACTGATGAAGGAGCTATTTAACTATTCTAAATGATACTCATATTTAATGTAAGAGTCAATATCTCTTCCAAGATGTTGTGGGCTTGTTTTTTTGTTTTTTGGATGCCTTTGTATTCTTTCATTTTTTTTGTCAATGGAAGTTGGTTTCTTATAAAATAAATATCTCTTCCAAGATGAGGAAAGAGAACCAATCTTATCCTTCTTCTATCCTTTAGCATTTCGTTTGAGAAGGATCATCCAAATAAAGCAAATAGAATTTATAAAACTAAATATTATATTATATTACCGTTAATATGCAAAGTCTTTGACTCTAGCTCATGCAACTGCACTTACACGACACTCAAGGATTTTCCTTCTTCGTAGTTAGTTATTTCTTTGTTAAGGAATAGAACTATTTAACTCTTTTTTATTTGAAACCATGCTTTCATTGGGAAGGAACGAAAGAATATAAAGAACATACAAAAAGGTAGCCCACAAAAGGAGTCAAACTAAAACAAAGAGGGGCTCCAATCAAACAAAATGGTACCTAAAGGATAATTACAAAAGTTCTTATGCACTAGAGTCGAAAGAGAAACATGAAGCCTCAAAAGAGACCAAACCTCCTCACTAAATCTCTCAATCCCCCTAAAATTTCTATTGTTTCTTTCTAACCAAAGACCTCATAACGTAGCACAGACAGTGAAGAAGAAACTCCTCCACCATGGAACTGTTCTCTCTTTGATAAATCCAACAAAAATGGACACTTGGAAAAAAAGACACTAGACTAGACCAAAGTGGCAAAGTGGCAACTCTTACGCAAGTGATTAGTGTCTGTTGACGCCCTTCTACAATAGATACAACATTGTGGTCCTATCAGCATAGAAGACCTACTCGAGATCCAATCCAAAGTATTAACTTTGTTGTGAAGAACTAGCCACACATAAAGAAGTGAAATAGAGGCCACCGGCTGACATCTCATGGAGGAGAGGTAAAGGCAAGGGTATAACAAGCAGAGGAGTCTATCCTCCCACCACTCATTCTTCCAAAAGTATGTATCAAACTCATCGCCCACCAACCATCATGGGTTGACCCTAATGGTCAATAAGGGCCATAGAAAAAATAAAGGGCTTAGAGGGAATGGGTTCAATCCATAGTGGCCACCTACCTAGGATATTTAATATCCTACGAGTTTCCTTGGCAACCAAATGTAGTAGGGTCAAGCGGTTCGCCCATGAGATTAGTCGAGGTGCGCGTAAGCTGGCCTGGACACTCACGGATCTCAAAAAAAAAAAAAAAAAAAAACTCATCGCCCACCAAGCATTTAACAAACTAAGAGAGAAAATGGAACCCCTCATAGTCACAAATAGCTTTCCATGAATTTCTGGATGTGTTGTAACCCCAATTAGAGCTTAGATTGCCACAAACCAATACAACTCGCTTCTCTTCTCAATGTGAACTCCCAAAACCGACCAACCTTTTCTTATAGTCGGTCGATCAGTTCCATAGTAACTCCCAAGACTGACTACCACTGACCGATCAAAACTAACATGTCGATGATCGGCATTGGTTTTAGCCTAAAACCGATGTTAACCAACCAATGATCACTCCTAGAACAGACCACTGCAGTCGAAACACAAAAGTGGAAAACATCTAGATTTGATCTTGAGCGTTCACCTGCCCATGCGAAACTTCACTTTCTTGGGGATTTTAACCTTCCATAAAGAAGAGAACACAAAGGCATCTTGGGAAGGAGATGAAGAGCAAAGGGTATGGAGAAAAAAGGCTCAAGAGAAGCCCTCAAAAGGTTTTGGGATCCCGAACCTAGAGTCCCTTCCCCCTTGACGAGTCAGCTGGTCAGTAATAAGAGAAAGAAGACTAACATCCTCAGTTGCCTCTCTCTTAGTCAATGAGGGGAAAGCGAACTATAAAAAGGGAATGAAGAGGGCCCCAAACAAAAAAACTTCAAGAAGAATGGGAAAATGGTCAGAGAAGATATGTACCTGTTTTGACACCCTTGAGTTTTCAAACATGACATCCCATTCTTTAGAGATAAAAAACAGGTCTAACAAAGATAGAAACCCATCATTACCTTCCCCGTGAATTTACTATTGGACAATGGAATTTCCATCCGCCCAAGCTCTCCCATGATTCTATTAAATTTCCTCATGCTTTTAGTCTGTTTTCCAACTGGGAATCTCTCATGACCACATCTGATTATATTAAAATCTCCACCTACACACCACGGTTCATCCCAATAAGAGTGGAGAGGTCGCAACTCACTCCAAAGATGCTTCTTTTCTCTATGGTCATTCAGACCATACATGTTTGAAATCCAACAAACTTATTTTGTTGAAATGAACAAATTTGTTGGAGTCTCCCACTAAAGGTTCTAATCTACATGAGTCTTTATATCCTACCAAGAGCTTTAGTCAATCATAAGTAACTCTTCCTAGTTCAAACATACAATTCACCAAAATGGTGTCACAAGCCTCTCAACACCTAAGAAGAATCCTTCTTGTATTGATTCAGATGGGGAATTAGATGTTAGTATGAGTAGTAAGGAACCCAGTTTCTCCTATGCTGGAAACATAGTTGGCTAATTAGTTTGTAGAAGATTCATTTGCAGGAGCTTTCGAAAATCTATATGAAGATAATGAGCAAGATGTCGATGTTTCTTATGGAGTAGTTTCACCGGTGATTTCTCCCCAAATTCCAACCAAATTTTCTTCTCTTGTTGAGATCCGTGGATTTTAGATGTGGGCAATTCCCAATTTGTCACCAACAGTTAAAGCTCTTTAATTTTAACCTTGTTTGCTTAATAATGTTTTTCTTCTCTTGGAATAGTCTCTAAAAGTTCGATGCTTGTAAGATCTCATATATGCAGATATTCAAAAGTGGCTGGATTTTTTCCGGGGATCCATATTTTCTCGTTTCCTCATTAGTTGGTTATATCAGCAGGAGTGTGGAGCAGTTTTTTTTCATCCTCTTCTTCAAGATCGTTCTCTTTGATGGGCAAGGCTTGTTTTGGTTCTAATCTCAGTATTCTGAAGGATGTCTTCAAGTTTTGGTTTTCTGCTTGTGTAGATAGGAGGATTCAAGTTTATCTAGTCTCATCTCTGATTATGTTTGATTTGCTGTTAATTTTGTTGGTTTAAAAGAATCGAAGCTGCCCGTCTCAAGGCCTATTCATGTCTTTCTCAAAGCTTTCTGCTGGTTTTCTCTTCATGTTTTTATATCATTTGGATTGTTTCTTTTAACCGACATAATCACTTTTATTGTTGTTGGGTTTTGTCATTTTGTTTTTGTCTTTTGGCCTTCGTTATATCTGTTTTCTCTGTTTGATCTTGTTTTTATCTGTCTTCTTCTTCCCTCCCTTATGGAGGTTGTATTCTTTGAGCATTAGTCTCTTTTAATTTTTTCAAGGAAAAATTCCGTTTCTTGTTAAAAAAAATAAAGCTCCTGTCAGGAGGTCTTCTTGGTTTCTTGTTTAAGTACCAGATCAGGGAAAATATCTCCCAACCCTCTTGTATTCCAAGATATGATTGTTATTTCCATTTTTCTTAAATCCATAATTTTTCTGTTTTACATAGAATTGCATTACATCATAGTGTCTCTCAATTTCTTATGAAGTGCATTAATGAAGTTGCTTGCAATTGACACTTTCCAGAAAGAGTATGACAGAATACGATCCACGATTAGTGACGCCAACCTGCCTATATTTGGCTTCAAAAGCAGAAGAAAGCACAGTGCAAGCTAGACTTCTAGTCTTCTACATTAAAAAAATACGTAATCATTTACTCTTTTGACATGCTATAATTTATTATTTGCTTCCCTTCAACAAAAGATGCCCTTGGTAGCATGTGAAATAGTTAATCACTGTGGTTCTTTCCTTACAGATTCTGATGAAAAGTACAAGTATGAGATTAAACACATACTGGAAATGGAAATGAAGATTTTAGAAGCCCTTGACTATTATTTGGTGGTATTCCACCCTTATCGTGCGTTGTCTCAGTAA

mRNA sequence

ATGGCGTCAGTTGGTGGTGAAGGCCGGCGGTGGTTGGCAGAGACGGATGGTCGAGATGCCAAACCCTCCTTTGCTGCCGGTTGTTGTTCTCGAGTTAATTGTTCAAGTTGCAGTGCCATAATTTCAATCATCAAATCTCTCAAGGATCCTTCAGGCTTGATGAAGGGCCTACCTCACGCCCTTTACTGGATTGGACTCTGCTCTTTCCAGCCATTAGGCCCCAAAATTGGATGTCTGATACCAATTTGGGTTGTTGCAACTGCTATTACATATATGAGACGTGTTTACACCAGACCACTGCAGTCGAAACACAAAAGTGGAAAACATCTAGATTTGATCTTGAGCGTTCACCTGCCCATGCGAAACTTCACTTTCTTGGGGATTTTAACCTTCCATAAAGAAGAGAACACAAAGGCATCTTGGGAAGGAGATGAAGAGCAAAGGGTATGGAGAAAAAAGGCTCAAGAGAAGCCCTCAAAAGGAGCTTTCGAAAATCTATATGAAGATAATGAGCAAGATGTCGATGTTTCTTATGGAGTAGTTTCACCGATAGGAGGATTCAAAAAGAGTATGACAGAATACGATCCACGATTAGTGACGCCAACCTGCCTATATTTGGCTTCAAAAGCAGAAGAAAGCACAGTGCAAGCTAGACTTCTAGTCTTCTACATTAAAAAAATACATTCTGATGAAAAGTACAAGTATGAGATTAAACACATACTGGAAATGGAAATGAAGATTTTAGAAGCCCTTGACTATTATTTGGTGGTATTCCACCCTTATCGTGCGTTGTCTCAGTAA

Coding sequence (CDS)

ATGGCGTCAGTTGGTGGTGAAGGCCGGCGGTGGTTGGCAGAGACGGATGGTCGAGATGCCAAACCCTCCTTTGCTGCCGGTTGTTGTTCTCGAGTTAATTGTTCAAGTTGCAGTGCCATAATTTCAATCATCAAATCTCTCAAGGATCCTTCAGGCTTGATGAAGGGCCTACCTCACGCCCTTTACTGGATTGGACTCTGCTCTTTCCAGCCATTAGGCCCCAAAATTGGATGTCTGATACCAATTTGGGTTGTTGCAACTGCTATTACATATATGAGACGTGTTTACACCAGACCACTGCAGTCGAAACACAAAAGTGGAAAACATCTAGATTTGATCTTGAGCGTTCACCTGCCCATGCGAAACTTCACTTTCTTGGGGATTTTAACCTTCCATAAAGAAGAGAACACAAAGGCATCTTGGGAAGGAGATGAAGAGCAAAGGGTATGGAGAAAAAAGGCTCAAGAGAAGCCCTCAAAAGGAGCTTTCGAAAATCTATATGAAGATAATGAGCAAGATGTCGATGTTTCTTATGGAGTAGTTTCACCGATAGGAGGATTCAAAAAGAGTATGACAGAATACGATCCACGATTAGTGACGCCAACCTGCCTATATTTGGCTTCAAAAGCAGAAGAAAGCACAGTGCAAGCTAGACTTCTAGTCTTCTACATTAAAAAAATACATTCTGATGAAAAGTACAAGTATGAGATTAAACACATACTGGAAATGGAAATGAAGATTTTAGAAGCCCTTGACTATTATTTGGTGGTATTCCACCCTTATCGTGCGTTGTCTCAGTAA

Protein sequence

MASVGGEGRRWLAETDGRDAKPSFAAGCCSRVNCSSCSAIISIIKSLKDPSGLMKGLPHALYWIGLCSFQPLGPKIGCLIPIWVVATAITYMRRVYTRPLQSKHKSGKHLDLILSVHLPMRNFTFLGILTFHKEENTKASWEGDEEQRVWRKKAQEKPSKGAFENLYEDNEQDVDVSYGVVSPIGGFKKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ
Homology
[Close]
BLAST of Spg037391 vs. NCBI nr
Match: XP_022157726.1 (cyclin-C1-1-like isoform X1 [Momordica charantia])

HSP 1 Score: 153.7 bits (387), Expect = 2.3e-33
Identity = 75/79 (94.94%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 188 KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKI 247
           +KSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKK+HSDEKY+YEIKHILEMEMKI
Sbjct: 75  RKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKLHSDEKYRYEIKHILEMEMKI 134

Query: 248 LEALDYYLVVFHPYRALSQ 267
           LEALDYYLV+FHPYRALSQ
Sbjct: 135 LEALDYYLVIFHPYRALSQ 153

[Close]
BLAST of Spg037391 vs. NCBI nr
Match: XP_022157727.1 (cyclin-C1-1-like isoform X2 [Momordica charantia])

HSP 1 Score: 153.7 bits (387), Expect = 2.3e-33
Identity = 75/79 (94.94%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 188 KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKI 247
           +KSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKK+HSDEKY+YEIKHILEMEMKI
Sbjct: 75  RKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKLHSDEKYRYEIKHILEMEMKI 134

Query: 248 LEALDYYLVVFHPYRALSQ 267
           LEALDYYLV+FHPYRALSQ
Sbjct: 135 LEALDYYLVIFHPYRALSQ 153

[Close]
BLAST of Spg037391 vs. NCBI nr
Match: XP_022157728.1 (cyclin-C1-1-like isoform X3 [Momordica charantia])

HSP 1 Score: 153.7 bits (387), Expect = 2.3e-33
Identity = 75/79 (94.94%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 188 KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKI 247
           +KSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKK+HSDEKY+YEIKHILEMEMKI
Sbjct: 75  RKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKLHSDEKYRYEIKHILEMEMKI 134

Query: 248 LEALDYYLVVFHPYRALSQ 267
           LEALDYYLV+FHPYRALSQ
Sbjct: 135 LEALDYYLVIFHPYRALSQ 153

[Close]
BLAST of Spg037391 vs. NCBI nr
Match: XP_031736854.1 (cyclin-C1-1 isoform X3 [Cucumis sativus])

HSP 1 Score: 152.9 bits (385), Expect = 3.9e-33
Identity = 77/79 (97.47%), Postives = 78/79 (98.73%), Query Frame = 0 

Query: 188 KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKI 247
           +KSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKI SDEKYKYEIKHILEMEMKI
Sbjct: 7   RKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIQSDEKYKYEIKHILEMEMKI 66

Query: 248 LEALDYYLVVFHPYRALSQ 267
           LEALDYYLVVFHPYRALSQ
Sbjct: 67  LEALDYYLVVFHPYRALSQ 85

[Close]
BLAST of Spg037391 vs. NCBI nr
Match: XP_038901504.1 (cyclin-C1-1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 152.9 bits (385), Expect = 3.9e-33
Identity = 77/79 (97.47%), Postives = 78/79 (98.73%), Query Frame = 0 

Query: 188 KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKI 247
           +KSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKI SDEKYKYEIKHILEMEMKI
Sbjct: 44  RKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIQSDEKYKYEIKHILEMEMKI 103

Query: 248 LEALDYYLVVFHPYRALSQ 267
           LEALDYYLVVFHPYRALSQ
Sbjct: 104 LEALDYYLVVFHPYRALSQ 122

[Close]
BLAST of Spg037391 vs. ExPASy Swiss-Prot
Match: P93411 (Cyclin-C1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0504400 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.7e-29
Identity = 67/80 (83.75%), Postives = 73/80 (91.25%), Query Frame = 0 

Query: 188 KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKI-HSDEKYKYEIKHILEMEMK 247
           +KSMTEYDPRLV PTCLYLASK EESTVQARLLVFYIKK+  SDEKY++EIK ILEMEMK
Sbjct: 75  RKSMTEYDPRLVAPTCLYLASKVEESTVQARLLVFYIKKMCASDEKYRFEIKDILEMEMK 134

Query: 248 ILEALDYYLVVFHPYRALSQ 267
           +LEALDYYLVV+HPYR L Q
Sbjct: 135 LLEALDYYLVVYHPYRPLLQ 154

[Close]
BLAST of Spg037391 vs. ExPASy Swiss-Prot
Match: Q9FJK7 (Cyclin-C1-2 OS=Arabidopsis thaliana OX=3702 GN=CYCC1-2 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.5e-27
Identity = 58/79 (73.42%), Postives = 73/79 (92.41%), Query Frame = 0 

Query: 188 KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKI 247
           +KS+TEY+PRLV PTCLYLA KAEES V A+LLVFY+KK+++DEK++YEIK ILEMEMK+
Sbjct: 75  RKSLTEYEPRLVAPTCLYLACKAEESVVHAKLLVFYMKKLYADEKFRYEIKDILEMEMKV 134

Query: 248 LEALDYYLVVFHPYRALSQ 267
           LEAL++YLVVFHPYR+L +
Sbjct: 135 LEALNFYLVVFHPYRSLPE 153

[Close]
BLAST of Spg037391 vs. ExPASy Swiss-Prot
Match: Q9FJK6 (Cyclin-C1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCC1-1 PE=2 SV=2)

HSP 1 Score: 118.2 bits (295), Expect = 1.4e-25
Identity = 59/79 (74.68%), Postives = 69/79 (87.34%), Query Frame = 0 

Query: 188 KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKI 247
           +KSM E++PRLV  TCLYLASKAEES VQAR LVFYIK+++ DE  KYE+K IL MEMK+
Sbjct: 75  RKSMVEFEPRLVALTCLYLASKAEESIVQARNLVFYIKRLYPDEYNKYELKDILGMEMKV 134

Query: 248 LEALDYYLVVFHPYRALSQ 267
           LEALDYYLVVFHPYR+LS+
Sbjct: 135 LEALDYYLVVFHPYRSLSE 153

[Close]
BLAST of Spg037391 vs. ExPASy Swiss-Prot
Match: Q86KE7 (Cyclin-C OS=Dictyostelium discoideum OX=44689 GN=cycC PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.1e-09
Identity = 34/77 (44.16%), Postives = 49/77 (63.64%), Query Frame = 0 

Query: 188 KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKI 247
           K S  + +PRLV  TCLYL+SK EE   QA+     +K+I  D  + Y +  ILE E  +
Sbjct: 75  KNSFVDCEPRLVAVTCLYLSSKVEECITQAKKCAAKMKEI--DHSFNYLMNDILECEFFV 134

Query: 248 LEALDYYLVVFHPYRAL 265
           LE LD+ L+++HPY++L
Sbjct: 135 LEELDFCLIIYHPYKSL 149

[Close]
BLAST of Spg037391 vs. ExPASy Swiss-Prot
Match: P39947 (Cyclin-C OS=Rattus norvegicus OX=10116 GN=Ccnc PE=2 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 3.8e-07
Identity = 34/85 (40.00%), Postives = 48/85 (56.47%), Query Frame = 0 

Query: 190 SMTEYDPRLVTPTCLYLASKAEE-------STVQARLLVFYIK-KIHSDEKYKYEIKHIL 249
           S+   DP L+ PTC++LASK EE       S + A   V   +    S +++ Y + HIL
Sbjct: 72  SLKSIDPVLMAPTCVFLASKVEEFGVVSNTSLIAATTSVLKTRFSYASPKEFPYRMNHIL 131

Query: 250 EMEMKILEALDYYLVVFHPYRALSQ 267
           E E  +LE +D  L+V+HPYR L Q
Sbjct: 132 ECEFYLLELMDCCLIVYHPYRPLLQ 156

[Close]
BLAST of Spg037391 vs. ExPASy TrEMBL
Match: A0A6J1DV87 (cyclin-C1-1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024378 PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.1e-33
Identity = 75/79 (94.94%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 188 KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKI 247
           +KSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKK+HSDEKY+YEIKHILEMEMKI
Sbjct: 75  RKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKLHSDEKYRYEIKHILEMEMKI 134

Query: 248 LEALDYYLVVFHPYRALSQ 267
           LEALDYYLV+FHPYRALSQ
Sbjct: 135 LEALDYYLVIFHPYRALSQ 153

[Close]
BLAST of Spg037391 vs. ExPASy TrEMBL
Match: A0A6J1DU31 (cyclin-C1-1-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111024378 PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.1e-33
Identity = 75/79 (94.94%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 188 KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKI 247
           +KSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKK+HSDEKY+YEIKHILEMEMKI
Sbjct: 75  RKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKLHSDEKYRYEIKHILEMEMKI 134

Query: 248 LEALDYYLVVFHPYRALSQ 267
           LEALDYYLV+FHPYRALSQ
Sbjct: 135 LEALDYYLVIFHPYRALSQ 153

[Close]
BLAST of Spg037391 vs. ExPASy TrEMBL
Match: A0A6J1DZ20 (cyclin-C1-1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024378 PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.1e-33
Identity = 75/79 (94.94%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 188 KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKI 247
           +KSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKK+HSDEKY+YEIKHILEMEMKI
Sbjct: 75  RKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKLHSDEKYRYEIKHILEMEMKI 134

Query: 248 LEALDYYLVVFHPYRALSQ 267
           LEALDYYLV+FHPYRALSQ
Sbjct: 135 LEALDYYLVIFHPYRALSQ 153

[Close]
BLAST of Spg037391 vs. ExPASy TrEMBL
Match: A0A0A0LKA5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G337780 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.9e-33
Identity = 77/79 (97.47%), Postives = 78/79 (98.73%), Query Frame = 0 

Query: 188 KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKI 247
           +KSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKI SDEKYKYEIKHILEMEMKI
Sbjct: 75  RKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIQSDEKYKYEIKHILEMEMKI 134

Query: 248 LEALDYYLVVFHPYRALSQ 267
           LEALDYYLVVFHPYRALSQ
Sbjct: 135 LEALDYYLVVFHPYRALSQ 153

[Close]
BLAST of Spg037391 vs. ExPASy TrEMBL
Match: A0A6J1I4M9 (cyclin-C1-1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469599 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 3.9e-31
Identity = 72/79 (91.14%), Postives = 77/79 (97.47%), Query Frame = 0 

Query: 188 KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKI 247
           +KSMTEYDPRLVTP CL+LASKAEESTVQARLLVFY+KKI SD+K+KYEIKHILEMEMKI
Sbjct: 75  RKSMTEYDPRLVTPACLHLASKAEESTVQARLLVFYLKKIQSDDKHKYEIKHILEMEMKI 134

Query: 248 LEALDYYLVVFHPYRALSQ 267
           LEALDYYLVVFHPYRALSQ
Sbjct: 135 LEALDYYLVVFHPYRALSQ 153

[Close]
BLAST of Spg037391 vs. TAIR 10
Match: AT5G48630.1 (Cyclin family protein )

HSP 1 Score: 124.8 bits (312), Expect = 1.0e-28
Identity = 58/79 (73.42%), Postives = 73/79 (92.41%), Query Frame = 0 

Query: 188 KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKI 247
           +KS+TEY+PRLV PTCLYLA KAEES V A+LLVFY+KK+++DEK++YEIK ILEMEMK+
Sbjct: 75  RKSLTEYEPRLVAPTCLYLACKAEESVVHAKLLVFYMKKLYADEKFRYEIKDILEMEMKV 134

Query: 248 LEALDYYLVVFHPYRALSQ 267
           LEAL++YLVVFHPYR+L +
Sbjct: 135 LEALNFYLVVFHPYRSLPE 153

[Close]
BLAST of Spg037391 vs. TAIR 10
Match: AT5G48630.2 (Cyclin family protein )

HSP 1 Score: 124.8 bits (312), Expect = 1.0e-28
Identity = 58/79 (73.42%), Postives = 73/79 (92.41%), Query Frame = 0 

Query: 188 KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKI 247
           +KS+TEY+PRLV PTCLYLA KAEES V A+LLVFY+KK+++DEK++YEIK ILEMEMK+
Sbjct: 78  RKSLTEYEPRLVAPTCLYLACKAEESVVHAKLLVFYMKKLYADEKFRYEIKDILEMEMKV 137

Query: 248 LEALDYYLVVFHPYRALSQ 267
           LEAL++YLVVFHPYR+L +
Sbjct: 138 LEALNFYLVVFHPYRSLPE 156

[Close]
BLAST of Spg037391 vs. TAIR 10
Match: AT5G48640.1 (Cyclin family protein )

HSP 1 Score: 118.2 bits (295), Expect = 9.8e-27
Identity = 59/79 (74.68%), Postives = 69/79 (87.34%), Query Frame = 0 

Query: 188 KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKI 247
           +KSM E++PRLV  TCLYLASKAEES VQAR LVFYIK+++ DE  KYE+K IL MEMK+
Sbjct: 75  RKSMVEFEPRLVALTCLYLASKAEESIVQARNLVFYIKRLYPDEYNKYELKDILGMEMKV 134

Query: 248 LEALDYYLVVFHPYRALSQ 267
           LEALDYYLVVFHPYR+LS+
Sbjct: 135 LEALDYYLVVFHPYRSLSE 153

[Close]
BLAST of Spg037391 vs. TAIR 10
Match: AT5G27620.1 (cyclin H;1 )

HSP 1 Score: 43.1 bits (100), Expect = 4.0e-04
Identity = 26/75 (34.67%), Postives = 45/75 (60.00%), Query Frame = 0 

Query: 190 SMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILE 249
           S+ ++ P+ +  TC+Y A K EE+ V A  +    K I+ D +       IL+ EM +L+
Sbjct: 116 SVMQHHPKEIMLTCVYAACKIEENHVSAEEIG---KGINQDHRI------ILKYEMAVLQ 175

Query: 250 ALDYYLVVFHPYRAL 265
           +L++ L+V+ PYRA+
Sbjct: 176 SLEFDLIVYAPYRAI 181

The following BLAST results are available for this feature:
BLAST of Spg037391 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022157726.12.3e-3394.94cyclin-C1-1-like isoform X1 [Momordica charantia][more]
XP_022157727.12.3e-3394.94cyclin-C1-1-like isoform X2 [Momordica charantia][more]
XP_022157728.12.3e-3394.94cyclin-C1-1-like isoform X3 [Momordica charantia][more]
XP_031736854.13.9e-3397.47cyclin-C1-1 isoform X3 [Cucumis sativus][more]
XP_038901504.13.9e-3397.47cyclin-C1-1-like isoform X2 [Benincasa hispida][more]
BLAST of Spg037391 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P934112.7e-2983.75Cyclin-C1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0504400 PE=2 SV=1[more]
Q9FJK71.5e-2773.42Cyclin-C1-2 OS=Arabidopsis thaliana OX=3702 GN=CYCC1-2 PE=2 SV=1[more]
Q9FJK61.4e-2574.68Cyclin-C1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCC1-1 PE=2 SV=2[more]
Q86KE71.1e-0944.16Cyclin-C OS=Dictyostelium discoideum OX=44689 GN=cycC PE=3 SV=1[more]
P399473.8e-0740.00Cyclin-C OS=Rattus norvegicus OX=10116 GN=Ccnc PE=2 SV=2[more]
BLAST of Spg037391 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DV871.1e-3394.94cyclin-C1-1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024378 PE=3 ... [more]
A0A6J1DU311.1e-3394.94cyclin-C1-1-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111024378 PE=3 ... [more]
A0A6J1DZ201.1e-3394.94cyclin-C1-1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024378 PE=3 ... [more]
A0A0A0LKA51.9e-3397.47Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G337780 PE=3 SV=1[more]
A0A6J1I4M93.9e-3191.14cyclin-C1-1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469599 PE=3 SV=... [more]
BLAST of Spg037391 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G48630.11.0e-2873.42Cyclin family protein [more]
AT5G48630.21.0e-2873.42Cyclin family protein [more]
AT5G48640.19.8e-2774.68Cyclin family protein [more]
AT5G27620.14.0e-0434.67cyclin H;1 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.10coord: 67..266
e-value: 3.5E-23
score: 84.1
NoneNo IPR availablePANTHERPTHR10026:SF125CYCLIN-C1-2-LIKE ISOFORM X1coord: 188..266
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 188..255
e-value: 1.0E-11
score: 44.7
IPR043198Cyclin/Cyclin-like subunit Ssn8PANTHERPTHR10026CYCLINcoord: 188..266
IPR013763Cyclin-likeCDDcd00043CYCLINcoord: 188..248
e-value: 1.4328E-5
score: 40.6849
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 188..257

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg037391.1Spg037391.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007049 cell cycle
biological_process GO:0051301 cell division
biological_process GO:0050790 regulation of catalytic activity
biological_process GO:0006357 regulation of transcription by RNA polymerase II
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity