Spg037368 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg037368
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	origin of replication complex subunit 6
Location	scaffold8: 1000228 .. 1003068 (+)
RNA-Seq Expression	Spg037368
Synteny	Spg037368

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTGTTGGTCCGGCTCGGTTTTTGTCCACTCGTGTTGGAGACCCTTCCCCCTTTCCCCATCACCTATAGAGCACTATTATTTTCTGCAATTTTCTCCCGCATGGATCTCTCCAACATTGCTCGCAAGCTCGATCTTTCCGACTCCGAAACCCTCATCCGAAAAGCTGGGGAGTTTCGTCGCCTCTCCGATCTCCATTTCAATTCTTCCGTTATTGGAGTTGTAAGTATCTGTCTACATCTCTTTCAATCAGTACGTGATCGGTTCTTCTCAATTTTGCATTTCATTTGAGCCATCGTTTTTGTTTTTGTTTTCAGGGGGAAGTTTGCAAGGCCATAATCTATTTGGAAATCGCCGCTACAAGGTGGAGGTTTTCGATGCGTGATTGAAATTTGTTTCATCGTCTATTTCTAATTTGTAAGTTCGTTGGTATTTGAATTTTGATGAGAATGGGTGGATGTTATTGTAGATTGGGGATTTTATTTGTAGATCAAGTGCAATCAAATTAAGCGGGATGTCGGAGAAGGCTTACACCAGATCTTTCAATTTGTTGCAGAATGGTCTTGGTTTCAAGTGCGTCTTTGGTTTTCTACATTTCTCTTTTTGTGACTCTTTATTACAATTGGTTACCTATAACGAATTTGGTTTTCTTTTGCTGCAGAAGTAGGCTTGATATTAGAGAACTAGCAGTGCAGTTTGGGTGTGTTAGGCTGGTTGCTTCAGTCCAAAAGGGATTATCTCTGTAAGATCCCTCTAATCAAAACTTTTTAGTTTTCTTTACATTTATTCTCATATCTTATTTTTCACCGGAATTGTGAAGTATACATAAAACAATACTCTTGTTCATCTAATTGTTGACGAATAAAAAATGAATTTCTGTAGCTTTATATCTTTGGTTGTTTAGCTTTCTATCAATGATTCTGATCTGTAATTTTGGATCCCTTTTAAAAAGTATATTGGTTCATATCATGACATCTATTTTTATTTGTTTTAGATACAAGGATCGGTTTGTTGCATCACCAGCTTCTCGACGGGTGAGTGCTGACTTCTCTCGATCATTATTTATAGTTGTAGCCTTCTACTTGTGTGCGAAAAAGCACAAGGTACCTCGTGATTACTATCCATCTTTTCAGTTTAGCAGCATGGTTGCATGCATGCCCTATAATTCTTACTGGAAATGCAATTTCATATGACAGCTTAAGGTTGACAAAGTTAAGCTCATTGAACTCAATGGTACATCTGAATCTGAATTCTCATGTGTAAGGAGCTTTCTTCTCTCTGTTGATTTGTTATTTTTTCTACAGGAATTGAGCCATTATTAATATTATCGTCATAGCAGATCACTACTTCTATGAAGGACTTGTGCTTTGATGTCTTTGGGATTTCTAGTGAAAAGAAAGATCCTAGAGATGCCAAAGGGAACAGAGGTATGTGTCTCCCATGCTTCATTTTCCTCATTTTCTCTCATTTTGTTGGTGTAGCTTATGTTTTTTTCCCCTCCCCCATGATTGGATTTCAACAGACCTACTTGACGCATTGCCAGAGAAAAGGAAACTTGAGGATGGCGGTTATTTATCTGATGATGGCGAAGAGTTATCAAGTAGCTGCATCCCGAGTACTTGAATTTCAGGAAAGAATTCTAATTGTTCATGTTCCCATATTTCATGTTGAGGATCACATGCTTTGCATTTTTGCCAAAATTGGAGAAAAGTCTAGAAGAGTTGTTTTTCAATATCTTGTTCAAGCCTTTACGGTTGTTTCAAAATGTTTGTCTCAATGTCTTTATATAACTTTCCTTTTCTTGTTCCATTCATGCTTAAATGGCCTTACATTTGGTATTGACCATTAATGTTGTGTCCCATTTATAGTTTCCAAGATCAAAACGACGCAAACCAATGGCTAAACAAACCTATAATCAGTGGAAATCCTCTGTCATTGCTTCCAATAACCTGACAAGGACAAAAGGTCTTTTATTCATTTTCTATGGCACAAACTTCTTTTGATGTTAACTAGAGTAGTTATTTCACAGGACGTCTAACTATTAATTGTACTCTTTTCTCAGTTCTTGGCAAGAGAACCAAGCAAACTTCCCTTCACGTTTTCAAGAAAAATAAGGAAACAAGCGAATATTTGTGGTACCATTGTGATTCAGATGAAGATTTTCATAGAAGGGAGAGAAGTGGATGGTTCAACCCCTCTATTTCTTTCTATCAAATGTATTTGCTTGATTTTGGTAATTAGCAATCTGCTCATTTAAGCGTTTGTTGCTTGCATCCAGAGAGGTAAAGGGTAAAATCACTCCCTCGACTTCTCCTTTATTCTTACAAATCGTCGTGCCACAGGAAGGCTAGAATTTTTGCATGTACACATTAGTGTCCCAATGTATTTATCAATGTACAGATGAGTCTCAAAGTTTATAAATCATCATGGATTTTAATTCTTCAACTCGTGTAAATCTGTGTAAATTTTTTAATGGGAAATTTTAGTCCTTGTTTCCTTCCAATTCTCTAATTGTGGATTTTCCATTCGATATTGAGCATGAATATCATGTAGGAAATTGTTTATCCATGTATGGATGACGTAGATTTTTGAGGTATCATGTGATGCAACAACCCGATAATCGCGGTCAAAATGTAGACATTTTTCCAATAAGAGTTGGTACAAATTACACATTGAGACGCCTCTTAAAGGAGATGAAGTATGACTTTAGATGCATTCGTGCTTGGTTTGTGATAAGTGCCAAAAATATTTGTCCTTTATTCGGAACTCATTTCTTGTGAAACTTGTATGTCTTAGATCAAATTTACTATTTTCGAGCCTAAAAAGTGTAAAAGTATGTGAG

mRNA sequence

ATGGATCTCTCCAACATTGCTCGCAAGCTCGATCTTTCCGACTCCGAAACCCTCATCCGAAAAGCTGGGGAGTTTCGTCGCCTCTCCGATCTCCATTTCAATTCTTCCGTTATTGGAGTTGGGGAAGTTTGCAAGGCCATAATCTATTTGGAAATCGCCGCTACAAGATCAAGTGCAATCAAATTAAGCGGGATGTCGGAGAAGGCTTACACCAGATCTTTCAATTTGTTGCAGAATGGTCTTGGTTTCAAAAGTAGGCTTGATATTAGAGAACTAGCAGTGCAGTTTGGGTGTGTTAGGCTGGTTGCTTCAGTCCAAAAGGGATTATCTCTATACAAGGATCGGTTTGTTGCATCACCAGCTTCTCGACGGGTGAGTGCTGACTTCTCTCGATCATTATTTATAGTTGTAGCCTTCTACTTGTGTGCGAAAAAGCACAAGCTTAAGGTTGACAAAGTTAAGCTCATTGAACTCAATGGTACATCTGAATCTGAATTCTCATGTATCACTACTTCTATGAAGGACTTGTGCTTTGATGTCTTTGGGATTTCTAGTGAAAAGAAAGATCCTAGAGATGCCAAAGGGAACAGAGACCTACTTGACGCATTGCCAGAGAAAAGGAAACTTGAGGATGGCGGTTATTTATCTGATGATGGCGAAGAGTTATCAAGTAGCTGCATCCCGAGTACTTGA

Coding sequence (CDS)

ATGGATCTCTCCAACATTGCTCGCAAGCTCGATCTTTCCGACTCCGAAACCCTCATCCGAAAAGCTGGGGAGTTTCGTCGCCTCTCCGATCTCCATTTCAATTCTTCCGTTATTGGAGTTGGGGAAGTTTGCAAGGCCATAATCTATTTGGAAATCGCCGCTACAAGATCAAGTGCAATCAAATTAAGCGGGATGTCGGAGAAGGCTTACACCAGATCTTTCAATTTGTTGCAGAATGGTCTTGGTTTCAAAAGTAGGCTTGATATTAGAGAACTAGCAGTGCAGTTTGGGTGTGTTAGGCTGGTTGCTTCAGTCCAAAAGGGATTATCTCTATACAAGGATCGGTTTGTTGCATCACCAGCTTCTCGACGGGTGAGTGCTGACTTCTCTCGATCATTATTTATAGTTGTAGCCTTCTACTTGTGTGCGAAAAAGCACAAGCTTAAGGTTGACAAAGTTAAGCTCATTGAACTCAATGGTACATCTGAATCTGAATTCTCATGTATCACTACTTCTATGAAGGACTTGTGCTTTGATGTCTTTGGGATTTCTAGTGAAAAGAAAGATCCTAGAGATGCCAAAGGGAACAGAGACCTACTTGACGCATTGCCAGAGAAAAGGAAACTTGAGGATGGCGGTTATTTATCTGATGATGGCGAAGAGTTATCAAGTAGCTGCATCCCGAGTACTTGA

Protein sequence

MDLSNIARKLDLSDSETLIRKAGEFRRLSDLHFNSSVIGVGEVCKAIIYLEIAATRSSAIKLSGMSEKAYTRSFNLLQNGLGFKSRLDIRELAVQFGCVRLVASVQKGLSLYKDRFVASPASRRVSADFSRSLFIVVAFYLCAKKHKLKVDKVKLIELNGTSESEFSCITTSMKDLCFDVFGISSEKKDPRDAKGNRDLLDALPEKRKLEDGGYLSDDGEELSSSCIPST

Homology

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BLAST of Spg037368 vs. NCBI nr
Match: XP_038890701.1 (origin of replication complex subunit 6 [Benincasa hispida])

HSP 1 Score: 392.1 bits (1006), Expect = 3.3e-105
Identity = 208/233 (89.27%), Postives = 214/233 (91.85%), Query Frame = 0


Query: 1   MDLSNIARKLDLSDSETLIRKAGEFRRLSDLHFNSSVIGVGEVCKAIIYLEIAAT----- 60
           MDL NIARKLDL DSETLIRKAGEFRRLSDLHFNSSVIGVGEVCKAII LEIAAT     
Sbjct: 1   MDLQNIARKLDLVDSETLIRKAGEFRRLSDLHFNSSVIGVGEVCKAIICLEIAATRLGIL 60

Query: 61  --RSSAIKLSGMSEKAYTRSFNLLQNGLGFKSRLDIRELAVQFGCVRLVASVQKGLSLYK 120
             RSSAIKL+GMSEKAYTRSFNLLQNGLGFKSRLDIRELAVQFGCVRLV SVQKGLSLYK
Sbjct: 61  FDRSSAIKLTGMSEKAYTRSFNLLQNGLGFKSRLDIRELAVQFGCVRLVTSVQKGLSLYK 120

Query: 121 DRFVAS-PASRRVSADFSRSLFIVVAFYLCAKKHKLKVDKVKLIELNGTSESEFSCITTS 180
           DRFVAS PASRR +ADFSRS+F   AFYLCAKKHKLKVDKVKLIEL+GTSESEFSC+ TS
Sbjct: 121 DRFVASLPASRRANADFSRSVFTAAAFYLCAKKHKLKVDKVKLIELSGTSESEFSCVATS 180

Query: 181 MKDLCFDVFGISSEKKDPRDAKGNRDLLDALPEKRKLEDGGYLSDDGEELSSS 226
           MKDLCFDVFGISSEKKDPRDAKGNRDLLDALPEKRKLEDGGYLSDDGEE  +S
Sbjct: 181 MKDLCFDVFGISSEKKDPRDAKGNRDLLDALPEKRKLEDGGYLSDDGEEFPTS 233

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BLAST of Spg037368 vs. NCBI nr
Match: KAG7029958.1 (Origin of replication complex subunit 6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 390.6 bits (1002), Expect = 9.5e-105
Identity = 207/238 (86.97%), Postives = 215/238 (90.34%), Query Frame = 0


Query: 1   MDLSNIARKLDLSDSETLIRKAGEFRRLSDLHFNSSVIGVGEVCKAIIYLEIAAT----- 60
           MDLS IARKLDLSDSETL RKAGEFRRLSDL FNSS IGVGEVCKAII LEIAAT     
Sbjct: 1   MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATRLGIL 60

Query: 61  --RSSAIKLSGMSEKAYTRSFNLLQNGLGFKSRLDIRELAVQFGCVRLVASVQKGLSLYK 120
             RS+AIKLSGMSEKAYTRSFNL QNGLGFKS+LDIRELAVQFGCVRLVASVQKGLSLYK
Sbjct: 61  FDRSNAIKLSGMSEKAYTRSFNLFQNGLGFKSKLDIRELAVQFGCVRLVASVQKGLSLYK 120

Query: 121 DRFVAS-PASRRVSADFSRSLFIVVAFYLCAKKHKLKVDKVKLIELNGTSESEFSCITTS 180
           DRFVAS PASRR +ADFSRS+F   AFYLCAKKHKLKVDKVKLIEL+GTSESEFSC+ TS
Sbjct: 121 DRFVASLPASRRANADFSRSVFTAAAFYLCAKKHKLKVDKVKLIELSGTSESEFSCVATS 180

Query: 181 MKDLCFDVFGISSEKKDPRDAKGNRDLLDALPEKRKLEDGGYLSDDGEELSSSCIPST 231
           MKDLCFDVFGISSEKKDPRDAKGNRD+LDALPEKRK EDGGYLSDD EE+ SSCI ST
Sbjct: 181 MKDLCFDVFGISSEKKDPRDAKGNRDMLDALPEKRKREDGGYLSDDNEEVPSSCISST 238

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BLAST of Spg037368 vs. NCBI nr
Match: XP_022946231.1 (origin of replication complex subunit 6 [Cucurbita moschata])

HSP 1 Score: 381.3 bits (978), Expect = 5.8e-102
Identity = 202/231 (87.45%), Postives = 209/231 (90.48%), Query Frame = 0


Query: 1   MDLSNIARKLDLSDSETLIRKAGEFRRLSDLHFNSSVIGVGEVCKAIIYLEIAAT----- 60
           MDLS IARKLDLSDSETL RKAGEFRRLSDL FNSS IGVGEVCKAII LEIAAT     
Sbjct: 1   MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATRLGIL 60

Query: 61  --RSSAIKLSGMSEKAYTRSFNLLQNGLGFKSRLDIRELAVQFGCVRLVASVQKGLSLYK 120
             RS+AIKLSGMSEKAYTRSFNL QNGLGFKS+LDIRELAVQFGCVRLVASVQKGLSLYK
Sbjct: 61  FDRSNAIKLSGMSEKAYTRSFNLFQNGLGFKSKLDIRELAVQFGCVRLVASVQKGLSLYK 120

Query: 121 DRFVAS-PASRRVSADFSRSLFIVVAFYLCAKKHKLKVDKVKLIELNGTSESEFSCITTS 180
           DRFVAS PASRR +ADFSRS+F   AFYLCAKKHKLKVDKVKLIEL+GTSESEFSC+ TS
Sbjct: 121 DRFVASLPASRRANADFSRSVFTAAAFYLCAKKHKLKVDKVKLIELSGTSESEFSCVATS 180

Query: 181 MKDLCFDVFGISSEKKDPRDAKGNRDLLDALPEKRKLEDGGYLSDDGEELS 224
           MKDLCFDVFGISSEKKDPRDAKGNRD+LDALPEKRK EDGGYLSDD EE S
Sbjct: 181 MKDLCFDVFGISSEKKDPRDAKGNRDMLDALPEKRKCEDGGYLSDDNEEFS 231

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BLAST of Spg037368 vs. NCBI nr
Match: XP_022972855.1 (origin of replication complex subunit 6 [Cucurbita maxima])

HSP 1 Score: 378.6 bits (971), Expect = 3.7e-101
Identity = 200/231 (86.58%), Postives = 208/231 (90.04%), Query Frame = 0


Query: 1   MDLSNIARKLDLSDSETLIRKAGEFRRLSDLHFNSSVIGVGEVCKAIIYLEIAAT----- 60
           MDLS IARKLDLSDSETL RKAGEFRRLSDL FNSS IGVGEVCKAII LEIAAT     
Sbjct: 1   MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATRLGIL 60

Query: 61  --RSSAIKLSGMSEKAYTRSFNLLQNGLGFKSRLDIRELAVQFGCVRLVASVQKGLSLYK 120
             RS+AIKLSGMSEKAYTRSFNL QNGLGFKS+LDIRELAVQFGC+RLVASVQ GLSLYK
Sbjct: 61  FDRSNAIKLSGMSEKAYTRSFNLFQNGLGFKSKLDIRELAVQFGCIRLVASVQNGLSLYK 120

Query: 121 DRFVAS-PASRRVSADFSRSLFIVVAFYLCAKKHKLKVDKVKLIELNGTSESEFSCITTS 180
           DRFVAS PASRR +ADFSRS+F   AFYLCAKKHKLKVDKVKLIEL+GTSESEFSC+ TS
Sbjct: 121 DRFVASLPASRRANADFSRSVFTAAAFYLCAKKHKLKVDKVKLIELSGTSESEFSCVATS 180

Query: 181 MKDLCFDVFGISSEKKDPRDAKGNRDLLDALPEKRKLEDGGYLSDDGEELS 224
           MKDLCFDVFGISSEKKDPRDAKGNRD+LDALPEKRK EDGGYLSDD EE S
Sbjct: 181 MKDLCFDVFGISSEKKDPRDAKGNRDMLDALPEKRKREDGGYLSDDNEEFS 231

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BLAST of Spg037368 vs. NCBI nr
Match: XP_023545883.1 (origin of replication complex subunit 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 378.6 bits (971), Expect = 3.7e-101
Identity = 201/231 (87.01%), Postives = 208/231 (90.04%), Query Frame = 0


Query: 1   MDLSNIARKLDLSDSETLIRKAGEFRRLSDLHFNSSVIGVGEVCKAIIYLEIAAT----- 60
           MDLS IARKLDLSDSETL RKAGEFRRLSDL FNSS IGVGEVCKAII LEIAAT     
Sbjct: 1   MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATRLGIL 60

Query: 61  --RSSAIKLSGMSEKAYTRSFNLLQNGLGFKSRLDIRELAVQFGCVRLVASVQKGLSLYK 120
             RS+AIKLSGMSEKAYTRSFNL QNGLGFKS+LDIRELAVQFGCVRLVASVQKGLSLYK
Sbjct: 61  FDRSNAIKLSGMSEKAYTRSFNLFQNGLGFKSKLDIRELAVQFGCVRLVASVQKGLSLYK 120

Query: 121 DRFVAS-PASRRVSADFSRSLFIVVAFYLCAKKHKLKVDKVKLIELNGTSESEFSCITTS 180
           DRFVAS PASRR +ADFSRS+F   AFYLCAKKHKLKVDKVKLIEL+GTSESEFSC+ TS
Sbjct: 121 DRFVASLPASRRANADFSRSVFTAAAFYLCAKKHKLKVDKVKLIELSGTSESEFSCVATS 180

Query: 181 MKDLCFDVFGISSEKKDPRDAKGNRDLLDALPEKRKLEDGGYLSDDGEELS 224
           MKDLCFDVFGISSEKKDPRDAKGNRD+LDALPEKRK EDGGY SDD EE S
Sbjct: 181 MKDLCFDVFGISSEKKDPRDAKGNRDMLDALPEKRKREDGGYSSDDNEEFS 231

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BLAST of Spg037368 vs. ExPASy Swiss-Prot
Match: Q9ZVH3 (Origin of replication complex subunit 6 OS=Arabidopsis thaliana OX=3702 GN=ORC6 PE=1 SV=2)

HSP 1 Score: 293.9 bits (751), Expect = 1.6e-78
Identity = 155/234 (66.24%), Postives = 185/234 (79.06%), Query Frame = 0


Query: 1   MDLSNIARKLDLSDSETLIRKAGEFRRLSDLHFNSSVIGVGEVCKAIIYLEIAAT----- 60
           MD+S+I RKL L +++ LIRKA E RRL D  F+SS+IGVGE+CKA+I LEIAAT     
Sbjct: 1   MDISDIGRKLSLDNNKLLIRKAAEIRRLCDAQFDSSIIGVGEICKAVICLEIAATRLQII 60

Query: 61  --RSSAIKLSGMSEKAYTRSFNLLQNGLGFKSRLDIRELAVQFGCVRLVASVQKGLSLYK 120
             R +A+KLSGMSEKAY+RSFN LQN +G K +L++RELAVQFGCVR++ SVQ  LS YK
Sbjct: 61  FDRQAAVKLSGMSEKAYSRSFNSLQNVIGIKIKLNVRELAVQFGCVRVIKSVQNVLSSYK 120

Query: 121 DRFVAS-PASRRVSADFSRSLFIVVAFYLCAKKHKLKVDKVKLIELNGTSESEFSCITTS 180
           +RF+AS PASRR +ADF+R +F   AFYLCAKK KLKVDK++LIE+ GTSESEFSC++TS
Sbjct: 121 ERFLASLPASRRANADFTRPVFTAAAFYLCAKKQKLKVDKLRLIEVCGTSESEFSCVSTS 180

Query: 181 MKDLCFDVFGISSEKKDPRDAKGNRDLLDALPEKRKLEDGGYLSDDGEELSSSC 227
           M DLCFD  GIS EKKD +D KGNRDLLD LP KR+LEDGGY S D     SSC
Sbjct: 181 MTDLCFDCVGISKEKKDAKDVKGNRDLLDVLPGKRRLEDGGYSSGD----ESSC 230

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BLAST of Spg037368 vs. ExPASy Swiss-Prot
Match: Q8GSL4 (Origin of replication complex subunit 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ORC6 PE=3 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 2.0e-73
Identity = 146/235 (62.13%), Postives = 180/235 (76.60%), Query Frame = 0


Query: 1   MDLSNIARKLDLSDSETLIRKAGEFRRLSDLHFNSSVIGVGEVCKAIIYLEIAAT----- 60
           MD+S+IA +L LS S  ++RKA E RRL D+ F+SSV+G+GEVCKAII LEIAA+     
Sbjct: 1   MDMSSIASRLGLSGSRPVVRKAAELRRLCDVTFDSSVLGIGEVCKAIICLEIAASKFQVI 60

Query: 61  --RSSAIKLSGMSEKAYTRSFNLLQNGLGFKSRLDIRELAVQFGCVRLVASVQKGLSLYK 120
             R+ A+++SGMSEKAY RSFN LQNGLG K+ LD+REL +QFGCVRL+  VQKGLSLYK
Sbjct: 61  FDRAEAVRMSGMSEKAYIRSFNALQNGLGVKTTLDVRELGIQFGCVRLIPFVQKGLSLYK 120

Query: 121 DRFVAS-PASRRVSADFSRSLFIVVAFYLCAKKHKLKVDKVKLIELNGTSESEFSCITTS 180
           +RF+A+ P SRR S DF R +F   AFYLCAK+HKLKVDK+KLI+L GTS SEF+ ++TS
Sbjct: 121 ERFLAALPPSRRASTDFGRPVFTAAAFYLCAKRHKLKVDKLKLIDLCGTSSSEFTTVSTS 180

Query: 181 MKDLCFDVFGISSEKKDPRDAKGNRDLLDALPEKRKLED-----GGYLSDDGEEL 223
           M DLCFDVFGI+ EKKD +  KG+R+LLD LP KRK +D     G    DD +EL
Sbjct: 181 MADLCFDVFGIAKEKKDAKSIKGSRELLDVLPSKRKHDDDSDSSGESSGDDQDEL 235

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BLAST of Spg037368 vs. ExPASy Swiss-Prot
Match: A2YNY4 (Origin of replication complex subunit 6 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_26966 PE=3 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 2.9e-72
Identity = 144/235 (61.28%), Postives = 179/235 (76.17%), Query Frame = 0


Query: 1   MDLSNIARKLDLSDSETLIRKAGEFRRLSDLHFNSSVIGVGEVCKAIIYLEIAAT----- 60
           MD+S+IA +L LS S  ++ KA E RRL D+ F+SSV+G+GEVCKAII LEIAA+     
Sbjct: 1   MDMSSIASRLGLSGSRPVVGKAAELRRLCDVTFDSSVLGIGEVCKAIICLEIAASKFQVI 60

Query: 61  --RSSAIKLSGMSEKAYTRSFNLLQNGLGFKSRLDIRELAVQFGCVRLVASVQKGLSLYK 120
             R+ A+++SGMSEKAY RSFN LQNGLG K+ LD+REL +QFGCVRL+  VQKGLSLYK
Sbjct: 61  FDRAEAVRMSGMSEKAYIRSFNALQNGLGVKTTLDVRELGIQFGCVRLIPFVQKGLSLYK 120

Query: 121 DRFVAS-PASRRVSADFSRSLFIVVAFYLCAKKHKLKVDKVKLIELNGTSESEFSCITTS 180
           +RF+A+ P SRR S DF R +F   +FYLCAK+HKLKVDK+KLI+L GTS SEF+ ++TS
Sbjct: 121 ERFLAALPPSRRASTDFGRPVFTAASFYLCAKRHKLKVDKLKLIDLCGTSSSEFTTVSTS 180

Query: 181 MKDLCFDVFGISSEKKDPRDAKGNRDLLDALPEKRKLED-----GGYLSDDGEEL 223
           M DLCFDVFGI+ EKKD +  KG+R+LLD LP KRK +D     G    DD +EL
Sbjct: 181 MADLCFDVFGIAKEKKDAKSIKGSRELLDVLPSKRKHDDDSDSSGESSGDDQDEL 235

[Close]

BLAST of Spg037368 vs. ExPASy Swiss-Prot
Match: Q2HJF3 (Origin recognition complex subunit 6 OS=Bos taurus OX=9913 GN=ORC6 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.8e-14
Identity = 68/236 (28.81%), Postives = 112/236 (47.46%), Query Frame = 0


Query: 3   LSNIARKLDLSDSETLIRKAGEFRRLSDLHFNSSVIGVGEVCKAIIYLEIAAT------- 62
           +  +A +L +++ E L RKA E+ RLS +          E   A++ L++AA+       
Sbjct: 6   IRRLAPRLGIAEQEVL-RKAEEYLRLSRVKCVGLSARTTETSNAVMCLDLAASCMKCPLD 65

Query: 63  RSSAIKLSGMSEKAYTRSFNLLQNGLGFKSRLDIRELAVQFGCVRLVASVQKGLSLYKDR 122
           R+  IKLSG+++K Y       +  LG  S + IR+LAVQF C   V    K L  Y+  
Sbjct: 66  RAYLIKLSGLNKKMYQSCLKSFECLLGLNSNIGIRDLAVQFSCTEAVNLASKILQSYES- 125

Query: 123 FVASPASRRVSADFSRSLFIVVAFYLCAKKHKLKVDKVKLIELNGTSESEFSCITTSMKD 182
             + P +++V  D SR LF   A     K  KLKVD+ K+   +G  ++ F  +   ++ 
Sbjct: 126 --SLPQTQQVDLDLSRPLFTTAALLSACKILKLKVDRNKMAATSGVKKAIFDRLCKQLEK 185

Query: 183 LCFDVFGISSEKKDP----------RDAKGNRDLLDALPEKRKLEDGGYLSDDGEE 222
           +   +   + +   P            AK   ++++ LP+ +K ED   L+ D EE
Sbjct: 186 IGQQIDREAGDSVTPPQKKKKTVIEPSAKEIENVVETLPKPQKDED---LTQDYEE 234

[Close]

BLAST of Spg037368 vs. ExPASy Swiss-Prot
Match: Q9Y5N6 (Origin recognition complex subunit 6 OS=Homo sapiens OX=9606 GN=ORC6 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.8e-14
Identity = 55/181 (30.39%), Postives = 93/181 (51.38%), Query Frame = 0


Query: 3   LSNIARKLDLSDSETLIRKAGEFRRLSDLHFNSSVIGVGEVCKAIIYLEIAAT------- 62
           +  +A +L L++ + ++RKA E+ RLS +          E   A++ L++AA+       
Sbjct: 6   IGRLAPRLGLAEPD-MLRKAEEYLRLSRVKCVGLSARTTETSSAVMCLDLAASWMKCPLD 65

Query: 63  RSSAIKLSGMSEKAYTRSFNLLQNGLGFKSRLDIRELAVQFGCVRLVASVQKGLSLYKDR 122
           R+  IKLSG++++ Y       +  LG  S + IR+LAVQF C+  V    K L  Y+  
Sbjct: 66  RAYLIKLSGLNKETYQSCLKSFECLLGLNSNIGIRDLAVQFSCIEAVNMASKILKSYES- 125

Query: 123 FVASPASRRVSADFSRSLFIVVAFYLCAKKHKLKVDKVKLIELNGTSESEFSCITTSMKD 177
             + P +++V  D SR LF   A     K  KLKVDK K++  +G  ++ F  +   ++ 
Sbjct: 126 --SLPQTQQVDLDLSRPLFTSAALLSACKILKLKVDKNKMVATSGVKKAIFDRLCKQLEK 182

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BLAST of Spg037368 vs. ExPASy TrEMBL
Match: A0A6J1G325 (origin of replication complex subunit 6 OS=Cucurbita moschata OX=3662 GN=LOC111450377 PE=3 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 2.8e-102
Identity = 202/231 (87.45%), Postives = 209/231 (90.48%), Query Frame = 0


Query: 1   MDLSNIARKLDLSDSETLIRKAGEFRRLSDLHFNSSVIGVGEVCKAIIYLEIAAT----- 60
           MDLS IARKLDLSDSETL RKAGEFRRLSDL FNSS IGVGEVCKAII LEIAAT     
Sbjct: 1   MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATRLGIL 60

Query: 61  --RSSAIKLSGMSEKAYTRSFNLLQNGLGFKSRLDIRELAVQFGCVRLVASVQKGLSLYK 120
             RS+AIKLSGMSEKAYTRSFNL QNGLGFKS+LDIRELAVQFGCVRLVASVQKGLSLYK
Sbjct: 61  FDRSNAIKLSGMSEKAYTRSFNLFQNGLGFKSKLDIRELAVQFGCVRLVASVQKGLSLYK 120

Query: 121 DRFVAS-PASRRVSADFSRSLFIVVAFYLCAKKHKLKVDKVKLIELNGTSESEFSCITTS 180
           DRFVAS PASRR +ADFSRS+F   AFYLCAKKHKLKVDKVKLIEL+GTSESEFSC+ TS
Sbjct: 121 DRFVASLPASRRANADFSRSVFTAAAFYLCAKKHKLKVDKVKLIELSGTSESEFSCVATS 180

Query: 181 MKDLCFDVFGISSEKKDPRDAKGNRDLLDALPEKRKLEDGGYLSDDGEELS 224
           MKDLCFDVFGISSEKKDPRDAKGNRD+LDALPEKRK EDGGYLSDD EE S
Sbjct: 181 MKDLCFDVFGISSEKKDPRDAKGNRDMLDALPEKRKCEDGGYLSDDNEEFS 231

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BLAST of Spg037368 vs. ExPASy TrEMBL
Match: A0A6J1I9T7 (origin of replication complex subunit 6 OS=Cucurbita maxima OX=3661 GN=LOC111471366 PE=3 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.8e-101
Identity = 200/231 (86.58%), Postives = 208/231 (90.04%), Query Frame = 0


Query: 1   MDLSNIARKLDLSDSETLIRKAGEFRRLSDLHFNSSVIGVGEVCKAIIYLEIAAT----- 60
           MDLS IARKLDLSDSETL RKAGEFRRLSDL FNSS IGVGEVCKAII LEIAAT     
Sbjct: 1   MDLSKIARKLDLSDSETLTRKAGEFRRLSDLQFNSSAIGVGEVCKAIICLEIAATRLGIL 60

Query: 61  --RSSAIKLSGMSEKAYTRSFNLLQNGLGFKSRLDIRELAVQFGCVRLVASVQKGLSLYK 120
             RS+AIKLSGMSEKAYTRSFNL QNGLGFKS+LDIRELAVQFGC+RLVASVQ GLSLYK
Sbjct: 61  FDRSNAIKLSGMSEKAYTRSFNLFQNGLGFKSKLDIRELAVQFGCIRLVASVQNGLSLYK 120

Query: 121 DRFVAS-PASRRVSADFSRSLFIVVAFYLCAKKHKLKVDKVKLIELNGTSESEFSCITTS 180
           DRFVAS PASRR +ADFSRS+F   AFYLCAKKHKLKVDKVKLIEL+GTSESEFSC+ TS
Sbjct: 121 DRFVASLPASRRANADFSRSVFTAAAFYLCAKKHKLKVDKVKLIELSGTSESEFSCVATS 180

Query: 181 MKDLCFDVFGISSEKKDPRDAKGNRDLLDALPEKRKLEDGGYLSDDGEELS 224
           MKDLCFDVFGISSEKKDPRDAKGNRD+LDALPEKRK EDGGYLSDD EE S
Sbjct: 181 MKDLCFDVFGISSEKKDPRDAKGNRDMLDALPEKRKREDGGYLSDDNEEFS 231

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BLAST of Spg037368 vs. ExPASy TrEMBL
Match: A0A5D3BK89 (Origin of replication complex subunit 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold316G00100 PE=3 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.8e-101
Identity = 203/239 (84.94%), Postives = 214/239 (89.54%), Query Frame = 0


Query: 1   MDLSNIARKLDLSDSETLIRKAGEFRRLSDLHFNSSVIGVGEVCKAIIYLEIAAT----- 60
           MD  NIARKLDL+DSE+LIRKAGE RRLSDLHFNSS+IG+GEVCKA+I LEIAAT     
Sbjct: 1   MDFHNIARKLDLADSESLIRKAGELRRLSDLHFNSSLIGIGEVCKAVICLEIAATRLGVL 60

Query: 61  --RSSAIKLSGMSEKAYTRSFNLLQNGLGFKSRLDIRELAVQFGCVRLVASVQKGLSLYK 120
             RSSAIKL+GMSEKAYTRSFNLLQNGLGFKSRLDIRELAVQFGCVRLVASVQKGLSLYK
Sbjct: 61  FDRSSAIKLAGMSEKAYTRSFNLLQNGLGFKSRLDIRELAVQFGCVRLVASVQKGLSLYK 120

Query: 121 DRFVAS-PASRRVSADFSRSLFIVVAFYLCAKKHKLKVDKVKLIELNGTSESEFSCITTS 180
           DRFVAS PASRRVSADFSR +F  VAFYLCAKK+KLKVDKVKLIEL+GTSESEFSC+ TS
Sbjct: 121 DRFVASLPASRRVSADFSRPVFTAVAFYLCAKKNKLKVDKVKLIELSGTSESEFSCVATS 180

Query: 181 MKDLCFDVFGISSEKKDPRDAKGNRDLLDALPEKRKLEDGGYLSDDGEEL--SSSCIPS 230
           MKDLCFDVFGISS KKDPRDAKGNRDLLDALPEKRK EDGGYLSDD EE   S  C P+
Sbjct: 181 MKDLCFDVFGISSVKKDPRDAKGNRDLLDALPEKRKREDGGYLSDDCEEFPRSKRCKPT 239

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BLAST of Spg037368 vs. ExPASy TrEMBL
Match: A0A1S3B4N5 (origin of replication complex subunit 6 OS=Cucumis melo OX=3656 GN=LOC103485769 PE=3 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.8e-101
Identity = 203/239 (84.94%), Postives = 214/239 (89.54%), Query Frame = 0


Query: 1   MDLSNIARKLDLSDSETLIRKAGEFRRLSDLHFNSSVIGVGEVCKAIIYLEIAAT----- 60
           MD  NIARKLDL+DSE+LIRKAGE RRLSDLHFNSS+IG+GEVCKA+I LEIAAT     
Sbjct: 1   MDFHNIARKLDLADSESLIRKAGELRRLSDLHFNSSLIGIGEVCKAVICLEIAATRLGVL 60

Query: 61  --RSSAIKLSGMSEKAYTRSFNLLQNGLGFKSRLDIRELAVQFGCVRLVASVQKGLSLYK 120
             RSSAIKL+GMSEKAYTRSFNLLQNGLGFKSRLDIRELAVQFGCVRLVASVQKGLSLYK
Sbjct: 61  FDRSSAIKLAGMSEKAYTRSFNLLQNGLGFKSRLDIRELAVQFGCVRLVASVQKGLSLYK 120

Query: 121 DRFVAS-PASRRVSADFSRSLFIVVAFYLCAKKHKLKVDKVKLIELNGTSESEFSCITTS 180
           DRFVAS PASRRVSADFSR +F  VAFYLCAKK+KLKVDKVKLIEL+GTSESEFSC+ TS
Sbjct: 121 DRFVASLPASRRVSADFSRPVFTAVAFYLCAKKNKLKVDKVKLIELSGTSESEFSCVATS 180

Query: 181 MKDLCFDVFGISSEKKDPRDAKGNRDLLDALPEKRKLEDGGYLSDDGEEL--SSSCIPS 230
           MKDLCFDVFGISS KKDPRDAKGNRDLLDALPEKRK EDGGYLSDD EE   S  C P+
Sbjct: 181 MKDLCFDVFGISSVKKDPRDAKGNRDLLDALPEKRKREDGGYLSDDCEEFPRSKRCKPT 239

[Close]

BLAST of Spg037368 vs. ExPASy TrEMBL
Match: A0A0A0LKW3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G108700 PE=3 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 2.0e-100
Identity = 200/239 (83.68%), Postives = 213/239 (89.12%), Query Frame = 0


Query: 1   MDLSNIARKLDLSDSETLIRKAGEFRRLSDLHFNSSVIGVGEVCKAIIYLEIAAT----- 60
           MD  N+ARKLDL+DSE+LIRKAGEFRRLSDLHFNSS+IGVGEVCKAII LEIAAT     
Sbjct: 1   MDFRNLARKLDLADSESLIRKAGEFRRLSDLHFNSSLIGVGEVCKAIICLEIAATRLGFL 60

Query: 61  --RSSAIKLSGMSEKAYTRSFNLLQNGLGFKSRLDIRELAVQFGCVRLVASVQKGLSLYK 120
             RSSAIKL+GMSEKAYTR+FNLLQNGLGFKSRLDIRELAVQFGCVRLVASV KGLSLYK
Sbjct: 61  FDRSSAIKLTGMSEKAYTRAFNLLQNGLGFKSRLDIRELAVQFGCVRLVASVHKGLSLYK 120

Query: 121 DRFVAS-PASRRVSADFSRSLFIVVAFYLCAKKHKLKVDKVKLIELNGTSESEFSCITTS 180
           DRFVAS PASRR +ADFSR +F  VAFYLCAKK+KLKVDKVKLIEL+GTSESEFSC+ TS
Sbjct: 121 DRFVASLPASRRANADFSRPVFTAVAFYLCAKKNKLKVDKVKLIELSGTSESEFSCVATS 180

Query: 181 MKDLCFDVFGISSEKKDPRDAKGNRDLLDALPEKRKLEDGGYLSDDGEEL--SSSCIPS 230
           MKDLC+DVFGI SEKKDPRDAKGNRDLLDALPEKRK EDGGYLSDD EE   S  C P+
Sbjct: 181 MKDLCYDVFGICSEKKDPRDAKGNRDLLDALPEKRKCEDGGYLSDDCEEFPRSKRCKPT 239

[Close]

BLAST of Spg037368 vs. TAIR 10
Match: AT1G26840.1 (origin recognition complex protein 6 )

HSP 1 Score: 293.9 bits (751), Expect = 1.1e-79
Identity = 155/234 (66.24%), Postives = 185/234 (79.06%), Query Frame = 0


Query: 1   MDLSNIARKLDLSDSETLIRKAGEFRRLSDLHFNSSVIGVGEVCKAIIYLEIAAT----- 60
           MD+S+I RKL L +++ LIRKA E RRL D  F+SS+IGVGE+CKA+I LEIAAT     
Sbjct: 1   MDISDIGRKLSLDNNKLLIRKAAEIRRLCDAQFDSSIIGVGEICKAVICLEIAATRLQII 60

Query: 61  --RSSAIKLSGMSEKAYTRSFNLLQNGLGFKSRLDIRELAVQFGCVRLVASVQKGLSLYK 120
             R +A+KLSGMSEKAY+RSFN LQN +G K +L++RELAVQFGCVR++ SVQ  LS YK
Sbjct: 61  FDRQAAVKLSGMSEKAYSRSFNSLQNVIGIKIKLNVRELAVQFGCVRVIKSVQNVLSSYK 120

Query: 121 DRFVAS-PASRRVSADFSRSLFIVVAFYLCAKKHKLKVDKVKLIELNGTSESEFSCITTS 180
           +RF+AS PASRR +ADF+R +F   AFYLCAKK KLKVDK++LIE+ GTSESEFSC++TS
Sbjct: 121 ERFLASLPASRRANADFTRPVFTAAAFYLCAKKQKLKVDKLRLIEVCGTSESEFSCVSTS 180

Query: 181 MKDLCFDVFGISSEKKDPRDAKGNRDLLDALPEKRKLEDGGYLSDDGEELSSSC 227
           M DLCFD  GIS EKKD +D KGNRDLLD LP KR+LEDGGY S D     SSC
Sbjct: 181 MTDLCFDCVGISKEKKDAKDVKGNRDLLDVLPGKRRLEDGGYSSGD----ESSC 230

The following BLAST results are available for this feature:

BLAST of Spg037368 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890701.1	3.3e-105	89.27	origin of replication complex subunit 6 [Benincasa hispida]	[more]
KAG7029958.1	9.5e-105	86.97	Origin of replication complex subunit 6 [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022946231.1	5.8e-102	87.45	origin of replication complex subunit 6 [Cucurbita moschata]	[more]
XP_022972855.1	3.7e-101	86.58	origin of replication complex subunit 6 [Cucurbita maxima]	[more]
XP_023545883.1	3.7e-101	87.01	origin of replication complex subunit 6 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Spg037368 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVH3	1.6e-78	66.24	Origin of replication complex subunit 6 OS=Arabidopsis thaliana OX=3702 GN=ORC6 ...	[more]
Q8GSL4	2.0e-73	62.13	Origin of replication complex subunit 6 OS=Oryza sativa subsp. japonica OX=39947...	[more]
A2YNY4	2.9e-72	61.28	Origin of replication complex subunit 6 OS=Oryza sativa subsp. indica OX=39946 G...	[more]
Q2HJF3	2.8e-14	28.81	Origin recognition complex subunit 6 OS=Bos taurus OX=9913 GN=ORC6 PE=2 SV=1	[more]
Q9Y5N6	2.8e-14	30.39	Origin recognition complex subunit 6 OS=Homo sapiens OX=9606 GN=ORC6 PE=1 SV=1	[more]

BLAST of Spg037368 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G325	2.8e-102	87.45	origin of replication complex subunit 6 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1I9T7	1.8e-101	86.58	origin of replication complex subunit 6 OS=Cucurbita maxima OX=3661 GN=LOC111471...	[more]
A0A5D3BK89	1.8e-101	84.94	Origin of replication complex subunit 6 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3B4N5	1.8e-101	84.94	origin of replication complex subunit 6 OS=Cucumis melo OX=3656 GN=LOC103485769 ...	[more]
A0A0A0LKW3	2.0e-100	83.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G108700 PE=3 SV=1	[more]

BLAST of Spg037368 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26840.1	1.1e-79	66.24	origin recognition complex protein 6	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.472.10		coord: 84..180 e-value: 3.2E-25 score: 90.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..230
None	No IPR available	PANTHER	PTHR13394:SF1	BNAC05G50940D PROTEIN	coord: 1..219
None	No IPR available	CDD	cd11583	Orc6_mid	coord: 85..180 e-value: 4.82408E-27 score: 97.7487
IPR008721	Origin recognition complex, subunit 6	PFAM	PF05460	ORC6	coord: 3..85 e-value: 2.6E-7 score: 30.2
IPR020529	Origin recognition complex, subunit 6, metazoa/plant	PANTHER	PTHR13394	ORIGIN RECOGNITION COMPLEX SUBUNIT 6	coord: 1..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg037368.1	Spg037368.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006270	DNA replication initiation
biological_process	GO:0006260	DNA replication
cellular_component	GO:0005664	nuclear origin of replication recognition complex
molecular_function	GO:0003677	DNA binding