Spg037346 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg037346
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ribonuclease H-like superfamily protein
Location	scaffold8: 738493 .. 750071 (-)
RNA-Seq Expression	Spg037346
Synteny	Spg037346

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGACGCCCTTGTAGCGGACTTTATTACACAGTCTTTTCATTGGGATGTGCATAAATTAAACCATTACTTCATTGGTATTGATGTGGAAGCAAGTCAATGTTTGCCCATAAGTAGTTCGGCTCCAGACAAAAGGATTTGGCATTACAATAGCAAATGTGTGTATTCTGTTAAAAGTGGTTACAAGTTATCTATGATGAAGAATCAAGAAGCATCTTTATCTAATATGGATAAAGAAGTTTCATGGTGGAAAAAAGTATGGAAAATGCGAGTGCCTGGTAAAGTTAAAATTTTTGTCTGGAAGAGTTTCCATAATTCCATTCCTACTATGGTAAATTTAGGAATTCATCATGTGCCAGTTCATGGGAATTGTTTGGTTTGTAAAGACGAGATGGAAACTTCAGACCATGCCATTTTTCAATGTTCGAGATCTCGAGAGGTATGGGAATGTCTTTATCCAGCCATGCTAACTAATTTATGTACTACTATGGATATCAAAGACAGGTGGTTAAGTTTGGCAGGACATTCTTTGGAAGCGTTGGAGAGGATCTGTGTGGGAGCATGGGCAATTTGGATAGATAGAAACTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTGAATGTAAGCAAACTGTATACTTGTTTTCAATAAAGTGTTATTGAGTTTCTACAATAAAGTGTTATTGTTAAATATTGCACAATTTGACCCAAATCCAATAAACTAAGATCCAAGGTTGTTTACATGTGACTTGAACTAGTATGTGGGGACATACGGGGATCGGTGTTCAAGTAACAACCTAAAAGGTCTATAGTACAGGGATAAGGCTGGGTACCTTATCCTGGTAACACTATGTGATATGGCCCGCTTTGTATTCGATACAGACGTATTGATCCAAGGCGTCCATGTAGGAGACATGCGAGCGGGGGTATCCTATGCAATGAGTTTGCATAAGACCGGACCATGAAATAGTCAACCATTAGTTGTAACACCGTTAACTAGTTAGGTTACTGTTTCAATAGGATGACCTAGGTAACTCAGTCTTAATCCTGAGTGTGTCATGAACTCCTTCTCACGAGGGATTTTCCTTTGATTAGTATGGGTGAGAGTGACCTGCACGCCGACTCAATAAGCCTACCTTCTTGGGGACAAGACCGAATGGGGGGCTGGGGACATGACAACACAAGATGGAATTCACTCATTCCCGCTTCTAGGAGAAGTAGATAAGTGTTCCCTTAAGTGGTGACTCCGGGACTTGAACAAAGGGATCCCGCCCTCTCACTGGCCCGAGACTGACTTTCTGTTTAATGGTTGGACCATAAACAAGTTGTTCATTAGAGGAGCGCTGGTACTTAAGGAGACAGATGTAACACAGGGGTAAAACGGTAATTTGACCCAGCTGTGATTACGGACACTTGTGAAGGATTGACTTACCGGCATAGGTCTACATCCATGGACACATAAATGTTCTACAGTGAGAAGAGTTCAGTTGTGGGTTTTTAGTGGAATGACCCACAGTTAATGAATATTGGTTAACTTGATTAATGAGTTTAATCAGTCAACCTCATATCATTGGAGCTTCTGATATGTAGGTCCATTAGGTCCCCCTGCTAGCTCGTAAAGAGTAATTAGGAACAAATATATCTTGAGAGAATTTTAATAGTTCAAATTCATATTGGGAATTAAGTTAATTGTATGAGATACAAATTAATATAATGTATAGTGATGCATTAAAATATAAAGTCTAATTTGAAATTAAAATTTATTATATTGAGAGATTGATATATTTGAAAGAGTTCAAATATATGTCTAATTAAATATATGGTATTTAATTAGAAGATGAATTAATTAATTATTCAATTTAGTTTAAATTAAATGAGATTTAATTAAACTATAGTCTATGAGGGAATTATTAGAATATGATTCTAATATGTAATTAATTGAATATGGGAGATATTTAATTAATTGTAAAATTAATTAATTATTGAAATTAATTAATTGATTAGTTTAATTGAATTAATTAAATGTGATTTAATTAAGTTTAATTAAAATATATTATGTGAGGAAGTTACATTTAAATAAGATTTAAATGTGCATGAGATTAATTAATATGATTTATTAATTAACATTTAATTAATTAATATGATTAGTTAATTATCATTTAATTAATTGATTTAATCAATTAATTAATTGATCTTGATCTAACGGTCAAGATTGTTTCCTAACCTCACATCAGGGTTTCCTCTCTTATAAAAGGAAAGGTTATGAGAACCCTAGCCCTAAGCGTCTCATTCTAGCCTCTCTCACATATTCTCTCAAGAACTCTGGAGATAAATTTTCTCTCTAAGAGTTTTTCCCAATCAAGATTAGTAGTCCCACAACTACGTTCCTAATCTCAGAGAATAGCAGGGTAGCCTCGTGGTGCTGTCCGTTGAAGTATTCAGAGTCGTCAATGGAGGTATGTTTTTCACCGCTTAACCTTTTGCCAATGTATTGGTATTTTGTAGAACAAAATTAACTTACGAACGGTCCAATTGCTTCTACTGTAACGGAATTGGGAATTCCAATCCTTCAGAAACAATGTAGTTCATCAGCGCCAGATTCCTAGCCCATTGGCTAGATGCGAATGGATTAATGACTACCTGGTAGAGTTCTTGAAGGCCAATCTGAAGGCTATAACTACTTCTCAGAAAATGGAGGACGTTGGAAAAATAATCTCTGAGGGCGAGAATTTGATTATGCATACAGATGCATCTATTTTGGCAGGGCAAAACACATGTGGTTTGGGGATTGTGATGTGTGATAAATATGGCAATTTAAAGGCAGTGTGAAATGCTTGTGCTACGACGTATTCAACTCCTTTGGGAGCGGAAGCGTTGGCGGTGCTTGAAGGTATACGTTTGGCTACATTGTTGAATGTCAAGCGTCTGACAATCTTGTCGGATTCCTTGACTGTGATAGATTCAATAAACGACAAGATACAGGTGGATTCAGGTATTGCGACGACGCTGTGGGACATCAAAGAAAATCATAAGCTTTTTGAGTGTATAACTTTTCATTTTACGAGTCGCAAATTTAATGGTTTAGCTCATAGAGTGGCCCGAATGGGTTTATCTACATTACTACATCTGTGGTTAGGTGACTATCGTGAGTGGATGGTTGGTTTGTCGCTCAAGGAGCGATGTTTATTTGTATCCTATGGGGATTCTTTTTTTTTTTTTGTTGAATGAAATTTCTTTCCTGTAAAAAATAAAAAAATAATAAAAAAAAAGAGGGTCCACTAATCAGATACCACCTAAACTTTAAACAAAAAGAATAATTAAATTAATTATGCCTAGACGCCAATGACTAAATAGATATATAAAAAAAAACATTTTTAACCATAAATTTGACAGGTTGTATTAATTTTAATCGAGAACTTAGATTGTACCAATTTAATCCTCAAATGCCAATAAGAGCTTAGCTCAATTGGCATAAAGTGGTATTGATAACCACAAGGTCTGTGGTTCAAATCTCCCCCCCCCCCCCCCCACATAATGTCAAAAAAAAAACCTAATTGATTATTTTTTTTCCTTAATTCTCATTGCACCTAAATTGATTTCTTGAAACTTTTTATTTGAAATAATTTTTGCAGCCGAAAAGTCTACATGAATTTTCTCTCATTTTCTTGTTAATGTATTTGTGGGTTTTGTTGTCTTTATTTAACTTTTTAGAATAACATGCAATTGTGGGATGATAATGGAATTGTCTTTTTCATGTTAGCTGGTATCTAGGATTACGAAGCAAAGTAATTTTAGAGGTTTTATCTTAAATGTTTGCTGATTTTTTCTTGTTGTTAAGAACTTGGGGGTTTTTTTTCCTTCCTTTACTGTTATTTTTTTCTGCTAAATAGAAAAACGTGAAAATATAGGAAACAAAAGTAAAGAAATTTTTTAGTTTTTAATTCTCATATTTGTTGGGTTTTTTTTTTTCTTTTTTTTTGCTAATAATATTGTGATTTTTTAGAGGAGGCTACTAACAATGAGAAGAATCCGTCTAGAATATTTGATTTCTTCAAATAAAGAGTTTCTCCAACAATTTTCTTACAAGAAACCTCAGATGCAATGTGAATTAAAAATCAAAAGGAAATTGTCAAGTAGATACTTTGATGTCAATTCAAATGGAAAGTTAACCAAAGCCAAAGGTATACATTGCAACAACTATGCAAGTTTATGGTTCAAATTGATACAATCTATCAAGTTTTGGGCGTTTTGTGGTTTAGGATTTTAGTGTTTCTGGGTTTTAGAGTTTAGAATTTCAGGGTTTTAGGGTTTAACGTTTATAGTTTTAGGGTTTTAGGGTTTTGGGTTTAGGGGTTATGGACTTTTAGGGTTTACAGTTTTCTTTGTTGGTGTTTTAGGGAAGGTTTAGGTTTAGGGTTTAAGGTTATCTTTGGATTTTGAGTGTTTAGACTAACTAATCATAAATTTTCAAAATTTGACAATTTTAGGATTTAGGGTTTTGGGGTTTTAAGGTTTAGGATTTTAGGGTTTTAGGGTTTAAGAGTTTAGAATTTTAGGGTTTTGGGTTCACAGGTTATGGACTTTTAGGGTTTACGTTTTCCTTTGTAGCGGTTTTAGGGAAGGTTAGGTTTAGGGTTTAGGGTTATCTATGGATTTTAAGTGTTTAGGCTATAGTAATCATACATTTTGAAAATTAGACAATTTTAGGGTTTAGGGTTTTATGGGTTTTAAGGTTTAAGATTTTAGACTTTTAGAGTTTAGAACTTTAAGGTTTTAGGGTTTTGGGGTTTTAGGGGTTATGGACTTTTAAGGTTTAGGATTTTATCTATGGATTTTAAGTGTTTAGGCTATAGTAATCATACATTTTGAAAATTAGACAATTTTAGGGTTTAGGGTTTTATGGGTTTTAAGGTTTAGGATTTTAGACTTTTAGAGTTTAGAACTTTATGGTTTTAGGGTTTTAGGGTTTTAGGGGTTATGGACTTTTAGGGTTTAGGGTTTTCTATGTTCGGGTTTTAGGGAATGTTAGGTTTAGGGTTTACTGTTATCTTTGGATTTTGAGTACTTAGGCTAAGTAATCATACATTTTCAAAATTTGACAATTTTAGGGTTTAGGGTTTTGTGGGTTTTGTGGTTTACGATTGTAGTGTTTTGGGGTTTTAGAGTTTAAAATTTTAGGGTTTTGGGTTTACAAGTTATGGTCTTTTAGGGTTTACATTTTTCTTTGTTGCGGTTTTAGGGAAGGTTAGGTTTAGGGGTTACGGTTATCTTTGAATTTTGAGTGTTTAGGCTATAGTAATCATACATTTTGAAAATTAGACAATTTTAAGGTTTAAGGTTTTCCGAGTTTTAAGGTTTAGGATTTTAGAGTTCTAGAGTTTAGAATTTTATGGTTTTATGGTTTTAGGGTTTTAGGGGTTATGGACTTTTAGGGTTTAGGGTTTTCTTTGTTTGGGTCTTAGGGAAGGTTAGGTTTAGGGTTTACCGTTATCTTTGGATTTTGAGTGTTTAGGCTAAGTAATCGTACATCTTAAAAATTTGACAATTTTAGGGTTACGGGTTTTTAGGGTTTTGTGGTTTAGAATGTTAGTGTTTTGGGGATTTAGAGTTTAGAATTTTAGGGTTTTAGGGTTTAACGTTTATGGTTTTATGGTTTTAGGGTTTTGAGTTTAGGGGTTATGGACTTTTAGGGTTTAGAGTTTTCTTTGTTTATGTTTTAGGGAAGGTTAGGTTTAGGGTTTAAGGTTATCCTTGGATTTTGAGTGTTTAGGCTAACTAATCATGAATTTTCAAAATTTGACAATTTTAGGATTTAGGGTTCTGGGGGTTTTAAGGGGTAGGATTTTAGAGTTTAAGAGTTTAGAATTTTAGGGTTTTGGGTTTACGAGTTATGGACTTTTAGGGTTTACGTTTTTCTTGGTTGCGGTTTTAGGGAAGGTTAGGTTTAGGGGTTAGGGTTATCTTTGAATTTTGAGTGTTTAGGCTATAATAATCATACTGTTGAAGGAGAAATTTTGACCAATCACAAATTGCCACGTCATTACATGAAATTAATGACAAAATTATAATTAATTAAATTTGGGACCAATTATAAATTGACATGTGTCCCAAATTTAATTTGAAGACAAAGTTGGTCAATTATAAATTTATAGAGCCAAATTTTTATTTGATCAATTAATTAAAATTAAATTATTTTGATCAAATTAATTAATTTGACCAATTAATTAAAAAAAATAATTATTTGGATCAAATTTGGGTCTTTTAAATATTTGGGTCGTATGGTTTTGGGTTAAATATGAACCAGACCCAAGACTAAATAGTTGAGCCCAAGACCAATAAAGCCCAAGCCCAAGTTGTTGGCCCAAAAGTCACCAGGGCCCATCCAGCGAGAACTCTATAAATAGAGGGGTTCTCTTCCATTTTAGGAGGTCAGAATTTTGAAGCTCCAAGCCAGAGTCAGAGAATTCAGAGAAACTCCATCAAGATTGAAGACTGAAGACTGAAGACTCCTTGAAATCCATAAGTTTCAAAGTGCTGAACACTTCTTGAAGATTGAAGACTCCTTCAAGATTAGAAGACTTCAGGCTCCAAGAATCCATTGAAGCTTCAGACTCGAGATCAAGCGTTCCAGCCCTCGAGTGAAACACATCCACACACAAAAGAGAGAATCAGAGGATTAACATTAGAGATTGTACATCCACACGCATACAAATATTAATACAAATATACGTTTATTCCACGTGTCTCCATCTTCGAAGTTACGTGTGAACAAATTGGCACGCCCAGCTGGACCATCTCTACCTCTCATCTCTTTCTCTTGCCTAAAGATCCAACCGACGTGATGACACCAAAGAAAGCTCCCTCGAAGGTTACAACATCGAGCGACTCTTATACGGGTCCTGTCACTCGTAGTCGTTCCCAAGGAATTGAGATCAAGGAGGATCATACTCCTCTTGCTGTTGCAAGCAGAATCTCAAAGTTGATTGAAGAATCCTCTAAGAATAAGGTTGCAGTCAAAGATAACCCGCTGTTCGAATCTGTCATTCCAACATCTAAACAGCCAAAGGATACACTAAATTCTGATGTGATGTCCGTCATGATGGCTGATGTAGACCAGGATGAAAGAATGGCAGAGATGGAAAGAAAACTCAATCTCTTAATGAAGGCAGTTGATGAAAGAGATCTTGAGATTGCCTATTTGAAGAACCAGTTGCAAAACCGAGAAACGGCTGAGTCTAATTAGACCCCTCCTGCAGGAAAGAATGATAAGGGGAAGACGGTCATTCGTGAAGACCAACCACAACACTCCACGTCATTGGCCTCTTTGTCTGTCCAACAACTGCAGGACATGATCATGAATTCCATCAGGGCTCAATATGGTGGACCCACTCAAAGTTCCCTCTTGTATTCCAAACCTTATACAAAGAGGATTGACAATCTGAGACTGCCCTCTGGGTATCAGCCTCCCAAGTTCCAACAGTTTGACGGAAAGGGCAACCCAAAGTAGCACATCGCCCACTTTGTTGAAACCTGTGAGAATGCTGGTACTCGGGGAGATTTGCTTGTTAAGCAATTTGTCCGAACACTGAAAGGAAACGCGTTCGGTTGGTACACTGACCTGGAGCCTGAGATAATTGACAGTTGGGAACAGATTGAGAGAGACTTTCTGAATCGCTTCTACAGTACGAGGCGAACAGTTAGTATGACGGAACTCACGAGCACAAAGCAACGGAAGGGTGAGCCAGTCATCGACTACATCAACCGTTGGAGAGCCTTGAGTCTCGACTGTAAAGATAGACTCTCCGAAGTGTCCTCTATTGAGATGTGCACCCAAGGCATGCACTGGGGACTTCTTTACATCTTACAAGGGATAAAACCTCAGACCTTTGAAGAATCAGCGACTCGCGCTCATGATATGAAGTTGAGCATCGCTAGTAGAGGGAATAAAGATCCCGTAGTCCCAGATACGAGGAAGGAAAAGAAGGAAGTTAAAGGCACTGAGAAAGTGAAGAAGAGTGCCACGAAAGAATCCATGGTCGTCAACACGACCCCCGTGAAACTTTCCGCCAAAGGAAGGGAAAACAAAACAAATAAGCGAGTGGAGACAGGCGAAAGACGTCGCCTAACTTTAAAAGAAAGACAGGAAAAGGTTTATCCATTTCCAGATTCCGATGTCCCAGATATGTTGGAACAACTGCTAGAGAAGCAATTAATCGAACTCCCTGAATGCAAACGACCGGAAGAGTTAGGAAAAGTTAATGATCCTAACTACTGCAAGTATCACCGAGTCGTTAGCCATCCGGTAGAGAAATGTTTTGTTTTAAAGGAGCTAATCCTTAAGTTGGCTCGTGAAAAGAAAATTGAGCTGGACCTTGATGAGGTGGCCCAAGCAAATCTTGCAACGATAATGACGAATGTAGGGCATCAAATTCCCCTAATCTTCTCATGTGATTATGAAGAAAGGCTGATTCAGTTTGGCACCCTTGATCCTGTAGTGGTTCGTTTCCAAAAAGAAGCCACAATGAAAGGATCCCAAGAAAAATATGATCCCATCGAAGATGAGAGCGAAGGTTGGACCCTTGTCGTTCGTCGCAAAAAGCAAAAGCAAAGTTACGCACGAAAAGAGTCCCACTTATTTTGAGACAGTAAAAGAAAGGTTAAATCTCAAAGGAAGAAGGGAAAAAAGAAATCAAGGAGGTCAAAACATGTCGTGGAGGAAAGTGAAGATTTCTTTTGTCCTCCACAATCTATAACTTTGGCAGAATACTTCCCAAGGCGCTTTCTCAATGATGGTCAAGGAGAAGTACTTGAAATCGTCACGTGTCACATTGTGGACGTGGTGGAAGATGATGATGTCCCTGCTAGTTCCTCGGGAACGGTGGCAGGTCCAGGAGACTTATCCTCCTTCAGCCTAAAGGATTTATTGTCACTTCCTCAGGAAGCTAAGAGTGTCCTTATTAATGCATTGATAGAGTCCGATGGTACAAACATCCCAACCTCCGTGGCACGCACATGTGCTTTGTGTTGCATGACTATAGGATTTTTCGATGAAGATTTGCTGCTAGGGTCGAAGCCTCACAATAGACCTTTATTCGTCTCGGGATACATCCGAGAACAGAGGGTTAGTCGGATTCTCATCGATGATGGATCAGCTGTCAATATAATGCCTAAGTCAACAATGAAGCAGTTAGGCGTCTCAATGGAAGAACTATCAAACAGTAAATTGGTAATTCAAGGTTTCAATCAAGGCGGACAACGAGCGATTGGCATGATATGCCTCGAGCTCATCATTGGGGATTTGAAGGCCGATACTTTGTTTCATGTGATAGATTCCAAGACCACTTATAAGCTACTATTAGGTCGTCCTTGGATCCATGGCAATGGAGTGATAACTTCTACATTGCACCGGTGCTTTAAATTTTATCAAGATGGCATTAAGAAAGTTTAGGCCGACATTAACCCATTCTCAGAAGCTGAATCTGACACGCCCCGCCCCAGATTATCCTAACCAACCTCAGACGTGACGTGTTGACAATGAAATCCCAACTAACTGCAAACTTCATTGTCCACTATGCATGAACTGAATTGACTATGAAAAAAAAATTTCAAACGTGGTTAGCAATGGTTTATTAAATGAAAATAAATCATAAAAATTTCGGCAGAGTTTCCCCTGAAATTTGGATATCTAACCCACCTGAAAGCAAGATTTAACACTCCCAAATAATCATAATATAAAATTCAATACCGGCGCCCAAGTCGGTTCAGAATTTACAACCATGACATAGTCAACTACACAAAACAGTATATAGTTTTCAATCACAAAAACCACAAACACAACCATGATCATACATCACCATGAAGATGCTAGCCATTCTAGTTACAAAAATAATACATCTATAAGTAATGCAAAATGACATGCAACCTATTGAGTCTGGTGGCAGATATCAACTCTGATAGGCTCGTCAGGAACTCAACTACTACCTGGTGGAAAAAGTTTAGAAAGAAAAAGGGTGAGCTAATAAACCCAGTAAGTGGTGATTCATATATAAAAAAAGATAAGATGTGACTTTTTAGGAACTCATGACAAACATAGTTGCAATCATAATTTAACAAACATTATAGACTTTTGATGAATAAAACCTTGAGATACCAAATAAAGTCTTATGCAAGTTAAAACGTGAAATAATGTCTAAAATCGAAAACACTGTAACATAAGCATTTGGAAGGATAAACCATCATGGGCTATGAGAAGTTTTCCATCACTAATAGTTGTACCCGAAACTGGTCATACTATATACGGAGAAACTCGACGTATAAGGCAGAGCAACTGGTCATTCTACATATCGAGTAGTCTCAAGATATGTAGCAGAGCAAATCTGGTCATACCACACATCGAGTAATCTCAAGATGTGTGGCAGAGCTATCCTGGTCATACCACACATCGAGTAATCTCAAGATGTGTGGCAGAGCTATCCTGGTCATAATTCTCAACAACCATGGTGACCAACCCTGCACGAAACTACAGTCATCGAAGTGACTGGTCTAGACAGGTGGTGAAATCATTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCTTGTAAGAAACTACAGTCATCGAAGTGTCTGGTCTAGACAGGTTGTGAAATCACTGCAAGTTAAGCTGATGACGACCGTGGTGACCACCCCTGTAGGAAACTACAGTCATCGAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAATCATCGAAGTGACTGGTCTAGACAGGTGTTGAAATCACTGCAAGTGAAGCTGATGACGATCGTGTTAGCAAACCCTGCAAGAAACTACAGTCATCGAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTACAGGAAACTACAGTCATCGAAGTGACTGTTCTAGACAGATGGTGAAATCACTACAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACCACAGTCGACCGTGGTGACCACCCCTGCAGGAAAATACAGTCATCAAAGTGACGGGTCTAGACAAATGGTGAAAACACTGCAACTGAAGCTTATGACGATCGTGGTGACCACCCGTGCAGGAAACTACAGTCATCGAAGTGACTGGTCTAGAAAGATGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGTAGGAAACTACAGTTATCGAAGTGATTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACTCCTGCAGGAAACTACAGTCATCGAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACTCCTGCAGGAAACTACAGTCATCGAAGTGACTTGTCTAGACCGGTGGGGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACACCTCCTGTAGGAAACTACAGTCATCGAAATGATTGGTCTAGATAG

mRNA sequence

ATGAAGGACGCCCTTGTAGCGGACTTTATTACACAGTCTTTTCATTGGGATGTGCATAAATTAAACCATTACTTCATTGGTATTGATGTGGAAGCAAGTCAATGTTTGCCCATAAGTAGTTCGGCTCCAGACAAAAGGATTTGGCATTACAATAGCAAATGTGTGTATTCTGTTAAAAGTGGTTACAAGTTATCTATGATGAAGAATCAAGAAGCATCTTTATCTAATATGGATAAAGAAGTTTCATGGTGGAAAAAAGTATGGAAAATGCGAGTGCCTGGTAAAGTTAAAATTTTTGTCTGGAAGAGTTTCCATAATTCCATTCCTACTATGGTAAATTTAGGAATTCATCATGTGCCAGTTCATGGGAATTGTTTGGTTTGTAAAGACGAGATGGAAACTTCAGACCATGCCATTTTTCAATGTTCGAGATCTCGAGAGGTATGGGAATGTCTTTATCCAGCCATGCTAACTAATTTATGTACTACTATGGATATCAAAGACAGGGATAAGGCTGGGTACCTTATCCTGGTAACACTATGTGATATGGCCCGCTTTGTATTCGATACAGACGTATTGATCCAAGGCGTCCATGTAGGAGACATGCGAGCGGGGGTATCCTATGCAATGAGGATCCCGCCCTCTCACTGGCCCGAGACTGACTTTCTGTTTAATGGTTGGACCATAAACAAGTTGTTCATTAGAGGAGCGCTGGTACTTAAGGAGACAGATGTAACACAGGGAAACAATGTAGTTCATCAGCGCCAGATTCCTAGCCCATTGGCTAGATGCGAATGGATTAATGACTACCTGGTAGAGTTCTTGAAGGCCAATCTGAAGGCTATAACTACTTCTCAGAAAATGGAGGACGTTGGAAAAATAATCTCTGAGGGCGAGAATTTGATTATGCATACAGATGCATCTATTTTGGCAGGGCAAAACACATGTGGTATACGTTTGGCTACATTGTTGAATGTCAAGCGTCTGACAATCTTGTCGGATTCCTTGACTGTGATAGATTCAATAAACGACAAGATACAGGTGGATTCAGGAATTGAGATCAAGGAGGATCATACTCCTCTTGCTGTTGCAAGCAGAATCTCAAAGTTGATTGAAGAATCCTCTAAGAATAAGGTTGCAGTCAAAGATAACCCGCTGTTCGAATCTGTCATTCCAACATCTAAACAGCCAAAGGATACACTAAATTCTGATGTGATGTCCGTCATGATGGCTGATGTAGACCAGGATGAAAGAATGGCAGAGATGGAAAGAAAACTCAATCTCTTAATGAAGGCATTTGGCACCCTTGATCCTGTAGTGGTTCGTTTCCAAAAAGAAGCCACAATGAAAGGATCCCAAGAAAAATATGATCCCATCGAAGATGAGAGCGAAGGTTGGACCCTTGTCGTTCGTCGCAAAAAGCAAAAGCAAAAATACTTCCCAAGGCGCTTTCTCAATGATGGTCAAGGAGAAGTACTTGAAATCGTCACGTGTCACATTGTGGACGTGGTGGAAGATGATGATGTCCCTGCTAGTTCCTCGGGAACGGTGGCAGGTCCAGGAGACTTATCCTCCTTCAGCCTAAAGGATTTATTGTCACTTCCTCAGGAAGCTAAGAATATCAACTCTGATAGGCTCGTCAGGAACTCAACTACTACCTGGTGGAAAAAGTTTAGAAAGAAAAAGGGTGAGCTAATAAACCCAGTGGTGAAATCATTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCTTGTAAGAAACTACAGTCATCGAAGTGTCTGGTCTAGACAGGTTGTGAAATCACTGCAAGTTAAGCTGATGACGACCGTGGTGACCACCCCTGTAGGAAACTACAGTCATCGAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAATCATCGAAGTGACTGGTCTAGACAGGTGTTGAAATCACTGCAAGTGAAGCTGATGACGATCGTGTTAGCAAACCCTGCAAGAAACTACAGTCATCGAAGTGACTGGTCTAGACAGGTGACAGATGGTGAAATCACTACAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACCACAGTCGACCGTGGTGACCACCCCTGCAGGAAAATACAGTCATCAAAGTGACGGGTCTAGACAAATGGTGAAAACACTGCAACTGAAGCTTATGACGATCGTGGTGACCACCCGTGCAGGAAACTACAGTCATCGAAGTGACTGGTCTAGAAAGATGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGTAGGAAACTACAGTTATCGAAGTGATTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACTCCTGCAGGAAACTACAGTCATCGAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACTCCTGCAGGAAACTACAGTCATCGAAGTGACTTGTCTAGACCGGTGGGGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACACCTCCTGTAGGAAACTACAGTCATCGAAATGATTGGTCTAGATAG

Coding sequence (CDS)

ATGAAGGACGCCCTTGTAGCGGACTTTATTACACAGTCTTTTCATTGGGATGTGCATAAATTAAACCATTACTTCATTGGTATTGATGTGGAAGCAAGTCAATGTTTGCCCATAAGTAGTTCGGCTCCAGACAAAAGGATTTGGCATTACAATAGCAAATGTGTGTATTCTGTTAAAAGTGGTTACAAGTTATCTATGATGAAGAATCAAGAAGCATCTTTATCTAATATGGATAAAGAAGTTTCATGGTGGAAAAAAGTATGGAAAATGCGAGTGCCTGGTAAAGTTAAAATTTTTGTCTGGAAGAGTTTCCATAATTCCATTCCTACTATGGTAAATTTAGGAATTCATCATGTGCCAGTTCATGGGAATTGTTTGGTTTGTAAAGACGAGATGGAAACTTCAGACCATGCCATTTTTCAATGTTCGAGATCTCGAGAGGTATGGGAATGTCTTTATCCAGCCATGCTAACTAATTTATGTACTACTATGGATATCAAAGACAGGGATAAGGCTGGGTACCTTATCCTGGTAACACTATGTGATATGGCCCGCTTTGTATTCGATACAGACGTATTGATCCAAGGCGTCCATGTAGGAGACATGCGAGCGGGGGTATCCTATGCAATGAGGATCCCGCCCTCTCACTGGCCCGAGACTGACTTTCTGTTTAATGGTTGGACCATAAACAAGTTGTTCATTAGAGGAGCGCTGGTACTTAAGGAGACAGATGTAACACAGGGAAACAATGTAGTTCATCAGCGCCAGATTCCTAGCCCATTGGCTAGATGCGAATGGATTAATGACTACCTGGTAGAGTTCTTGAAGGCCAATCTGAAGGCTATAACTACTTCTCAGAAAATGGAGGACGTTGGAAAAATAATCTCTGAGGGCGAGAATTTGATTATGCATACAGATGCATCTATTTTGGCAGGGCAAAACACATGTGGTATACGTTTGGCTACATTGTTGAATGTCAAGCGTCTGACAATCTTGTCGGATTCCTTGACTGTGATAGATTCAATAAACGACAAGATACAGGTGGATTCAGGAATTGAGATCAAGGAGGATCATACTCCTCTTGCTGTTGCAAGCAGAATCTCAAAGTTGATTGAAGAATCCTCTAAGAATAAGGTTGCAGTCAAAGATAACCCGCTGTTCGAATCTGTCATTCCAACATCTAAACAGCCAAAGGATACACTAAATTCTGATGTGATGTCCGTCATGATGGCTGATGTAGACCAGGATGAAAGAATGGCAGAGATGGAAAGAAAACTCAATCTCTTAATGAAGGCATTTGGCACCCTTGATCCTGTAGTGGTTCGTTTCCAAAAAGAAGCCACAATGAAAGGATCCCAAGAAAAATATGATCCCATCGAAGATGAGAGCGAAGGTTGGACCCTTGTCGTTCGTCGCAAAAAGCAAAAGCAAAAATACTTCCCAAGGCGCTTTCTCAATGATGGTCAAGGAGAAGTACTTGAAATCGTCACGTGTCACATTGTGGACGTGGTGGAAGATGATGATGTCCCTGCTAGTTCCTCGGGAACGGTGGCAGGTCCAGGAGACTTATCCTCCTTCAGCCTAAAGGATTTATTGTCACTTCCTCAGGAAGCTAAGAATATCAACTCTGATAGGCTCGTCAGGAACTCAACTACTACCTGGTGGAAAAAGTTTAGAAAGAAAAAGGGTGAGCTAATAAACCCAGTGGTGAAATCATTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCTTGTAAGAAACTACAGTCATCGAAGTGTCTGGTCTAGACAGGTTGTGAAATCACTGCAAGTTAAGCTGATGACGACCGTGGTGACCACCCCTGTAGGAAACTACAGTCATCGAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAATCATCGAAGTGACTGGTCTAGACAGGTGTTGAAATCACTGCAAGTGAAGCTGATGACGATCGTGTTAGCAAACCCTGCAAGAAACTACAGTCATCGAAGTGACTGGTCTAGACAGGTGACAGATGGTGAAATCACTACAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACCACAGTCGACCGTGGTGACCACCCCTGCAGGAAAATACAGTCATCAAAGTGACGGGTCTAGACAAATGGTGAAAACACTGCAACTGAAGCTTATGACGATCGTGGTGACCACCCGTGCAGGAAACTACAGTCATCGAAGTGACTGGTCTAGAAAGATGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGTAGGAAACTACAGTTATCGAAGTGATTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACTCCTGCAGGAAACTACAGTCATCGAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACTCCTGCAGGAAACTACAGTCATCGAAGTGACTTGTCTAGACCGGTGGGGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACACCTCCTGTAGGAAACTACAGTCATCGAAATGATTGGTCTAGATAG

Protein sequence

MKDALVADFITQSFHWDVHKLNHYFIGIDVEASQCLPISSSAPDKRIWHYNSKCVYSVKSGYKLSMMKNQEASLSNMDKEVSWWKKVWKMRVPGKVKIFVWKSFHNSIPTMVNLGIHHVPVHGNCLVCKDEMETSDHAIFQCSRSREVWECLYPAMLTNLCTTMDIKDRDKAGYLILVTLCDMARFVFDTDVLIQGVHVGDMRAGVSYAMRIPPSHWPETDFLFNGWTINKLFIRGALVLKETDVTQGNNVVHQRQIPSPLARCEWINDYLVEFLKANLKAITTSQKMEDVGKIISEGENLIMHTDASILAGQNTCGIRLATLLNVKRLTILSDSLTVIDSINDKIQVDSGIEIKEDHTPLAVASRISKLIEESSKNKVAVKDNPLFESVIPTSKQPKDTLNSDVMSVMMADVDQDERMAEMERKLNLLMKAFGTLDPVVVRFQKEATMKGSQEKYDPIEDESEGWTLVVRRKKQKQKYFPRRFLNDGQGEVLEIVTCHIVDVVEDDDVPASSSGTVAGPGDLSSFSLKDLLSLPQEAKNINSDRLVRNSTTTWWKKFRKKKGELINPVVKSLQVKLMTTVVTTLVRNYSHRSVWSRQVVKSLQVKLMTTVVTTPVGNYSHRSDWSRQVVKSLQVKLMTTVVTTPAGNYNHRSDWSRQVLKSLQVKLMTIVLANPARNYSHRSDWSRQVTDGEITTSEADDDRGDHPCRKPQSTVVTTPAGKYSHQSDGSRQMVKTLQLKLMTIVVTTRAGNYSHRSDWSRKMVKSLQVKLMTTVVTTPVGNYSYRSDWSRQVVKSLQVKLMTTVVTTPAGNYSHRSDWSRQVVKSLQVKLMTTVVTTPAGNYSHRSDLSRPVGKSLQVKLMTTVVTPPVGNYSHRNDWSR

Homology

[Close]

BLAST of Spg037346 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 128.3 bits (321), Expect = 3.4e-25
Identity = 60/153 (39.22%), Postives = 88/153 (57.52%), Query Frame = 0


Query: 3    DALVADFITQSFHWDVHKLNHYFIGIDVEASQCLPISS-SAPDKRIWHYNSKCVYSVKSG 62
            D  VA FIT   +WDV  ++H F   D +    +PISS +  D  +WHY+ +  YSV+SG
Sbjct: 1050 DTTVASFITADGNWDVTSISHSFCNEDRDLILSMPISSYNLQDSWLWHYDKRGNYSVRSG 1109

Query: 63   YKLSMMKNQEASLSNMDKEVSWWKKVWKMRVPGKVKIFVWKSFHNSIPTMVNLGIHHVPV 122
            YKL M     A+ ++ +   + W  +WK+ VP K+KIF+W+S H  IPT  NL +  +  
Sbjct: 1110 YKLYMHLKCNATSASTNYRGTQWNSIWKLTVPTKIKIFIWRSAHEHIPTAQNLLLRGIGE 1169

Query: 123  HGNCLVCKDEMETSDHAIFQCSRSREVWECLYP 155
               C +C D  E+  HA F C R+R++W  L+P
Sbjct: 1170 LPACTICGDRRESIIHAFFHCKRARQIWRTLFP 1202

[Close]

BLAST of Spg037346 vs. NCBI nr
Match: XP_030509050.1 (uncharacterized protein LOC115723712 [Cannabis sativa])

HSP 1 Score: 124.8 bits (312), Expect = 3.7e-24
Identity = 60/168 (35.71%), Postives = 95/168 (56.55%), Query Frame = 0


Query: 2    KDALVADFITQSFHWDVHKLNHYFIGIDVEASQCLPIS-SSAPDKRIWHYNSKCVYSVKS 61
            +D  VADFIT S  WDV KL  +F   DV+    +P+S     D  +WHY+S   Y+VKS
Sbjct: 969  RDVKVADFITHSRQWDVPKLQQFFTPPDVDRILSIPLSLFPCEDVLLWHYSSAGFYTVKS 1028

Query: 62   GYKLSMMKNQEASLSNMDKEVSWWKKVWKMRVPGKVKIFVWKSFHNSIPTMVNLGIHHVP 121
            GYKL+         S+   E +WW+  W +++P K++IF W+++H ++PT   L   H+ 
Sbjct: 1029 GYKLASDVPDSQPNSSHTTE-TWWQYFWGLKLPSKIRIFAWRAYHEALPTAAILQYRHIS 1088

Query: 122  VHGNCLVCKDEMETSDHAIFQCSRSREVWECLYPAMLTNLCTTMDIKD 169
                C +C+  +ET +HA F C+R+++VW+    ++  +L  T    D
Sbjct: 1089 SSPQCPLCQVHLETINHAFFWCNRAKQVWKNWDESINWSLSMTCSFSD 1135

[Close]

BLAST of Spg037346 vs. NCBI nr
Match: XP_030483481.1 (uncharacterized protein LOC115700065 [Cannabis sativa])

HSP 1 Score: 119.4 bits (298), Expect = 1.6e-22
Identity = 55/149 (36.91%), Postives = 89/149 (59.73%), Query Frame = 0


Query: 3    DALVADFITQSFHWDVHKLNHYFIGIDVEASQCLPIS-SSAPDKRIWHYNSKCVYSVKSG 62
            +A+VA+ IT+   W+   L+ +F  IDV+    +P+S  SA D  IWHY+S  +Y V SG
Sbjct: 916  NAVVANLITEDRQWNKQLLDEFFSSIDVDRILTIPLSYFSANDHLIWHYHSSGIYKVHSG 975

Query: 63   Y-KLSMMKNQEASLSNMDKEVSWWKKVWKMRVPGKVKIFVWKSFHNSIPTMVNLGIHHVP 122
            Y  L+ +++ + S S  +   +WWK  WK+++P K+KIF W+ FH+++P   +L   H+ 
Sbjct: 976  YHHLASLEDSDLS-STSNSSTNWWKYFWKLQLPQKIKIFAWRVFHDALPVATSLVRRHII 1035

Query: 123  VHGNCLVCKDEMETSDHAIFQCSRSREVW 150
                C VC+   E+  HA+F C  ++ VW
Sbjct: 1036 TDSTCSVCRQAWESIGHALFGCKYAKAVW 1063

[Close]

BLAST of Spg037346 vs. NCBI nr
Match: XP_030505314.1 (uncharacterized protein LOC115720302 [Cannabis sativa])

HSP 1 Score: 119.4 bits (298), Expect = 1.6e-22
Identity = 51/145 (35.17%), Postives = 83/145 (57.24%), Query Frame = 0


Query: 6    VADFITQSFHWDVHKLNHYFIGIDVEASQCLPISS-SAPDKRIWHYNSKCVYSVKSGYKL 65
            V+D IT    W++  L  +F+ ID++    LP+   ++ DK IWH+++  +YSVKSGY L
Sbjct: 972  VSDLITTDRTWNITALKRHFLSIDIDRILQLPLCQYASEDKLIWHHSASGIYSVKSGYHL 1031

Query: 66   SMMKNQEASLSNMDKEVSWWKKVWKMRVPGKVKIFVWKSFHNSIPTMVNLGIHHVPVHGN 125
            +    +  S S+   + SWW + WK+++P K+KIF W++ HN++P   NL   H+     
Sbjct: 1032 ASSLRESRSPSHSQSQTSWWNRFWKLKLPRKIKIFAWRTLHNALPLAANLHHRHIIDDPK 1091

Query: 126  CLVCKDEMETSDHAIFQCSRSREVW 150
            C  C    E+ +HA F C   + +W
Sbjct: 1092 CSRCAHSNESINHAFFLCRAVKNLW 1116

[Close]

BLAST of Spg037346 vs. NCBI nr
Match: XP_030495196.1 (uncharacterized protein LOC115710989 [Cannabis sativa])

HSP 1 Score: 116.3 bits (290), Expect = 1.3e-21
Identity = 51/152 (33.55%), Postives = 84/152 (55.26%), Query Frame = 0


Query: 3   DALVADFITQSFHWDVHKLNHYFIGIDVEASQCLPIS-SSAPDKRIWHYNSKCVYSVKSG 62
           + +VA+ IT+   WDV  LN YFI  DVE +  +P+S   + D  +WH+ +  +Y+V+SG
Sbjct: 723 NTVVANLITEDRQWDVALLNQYFIPADVERTLTIPLSYFPSNDCLVWHHTNNGIYTVQSG 782

Query: 63  YKLSMMKNQEASLSNMDKEVSWWKKVWKMRVPGKVKIFVWKSFHNSIPTMVNLGIHHVPV 122
           Y L+    ++   S+   E  WWK  W +++P K+KIF W+  H+++P   +L    V  
Sbjct: 783 YHLASSLAEQPHSSSSSSESKWWKSFWSLQLPEKIKIFAWRVIHDALPVATSLVKRKVIT 842

Query: 123 HGNCLVCKDEMETSDHAIFQCSRSREVWECLY 154
              C VC+   E+  H  F C  ++ VW  ++
Sbjct: 843 DAACSVCRQAWESVGHVFFGCHYAKNVWRLMH 874

[Close]

BLAST of Spg037346 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.9e-07
Identity = 38/142 (26.76%), Postives = 67/142 (47.18%), Query Frame = 0


Query: 16  WDVHKLNHYFIG---IDVEASQCLPISSSAPDKRIWHYNSKCVYSVKSGYKLSMMKNQEA 75
           WD  K++ Y      +++ A   L + + A D+  W ++    +SV+S Y+  M+   E 
Sbjct: 223 WDFAKIDPYTTNNTRLELRA-VVLDLVTGARDRLSWKFSQDGQFSVRSAYE--MLTVDEV 282

Query: 76  SLSNMDKEVSWWKKVWKMRVPGKVKIFVWKSFHNSIPTMVNLGIHHVPVHGNCLVCKDEM 135
              NM    S++  +WK+RVP +VK F+W   + ++ T       H+     C VCK  +
Sbjct: 283 PRPNM---ASFFNCLWKVRVPERVKTFLWLVGNQAVMTEEERHRRHLSASNVCQVCKGGV 342

Query: 136 ETSDHAIFQCSRSREVWECLYP 155
           E+  H +  C     +W  + P
Sbjct: 343 ESMLHVLRDCPAQLGIWVRVVP 358

[Close]

BLAST of Spg037346 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.6e-25
Identity = 60/153 (39.22%), Postives = 88/153 (57.52%), Query Frame = 0


Query: 3    DALVADFITQSFHWDVHKLNHYFIGIDVEASQCLPISS-SAPDKRIWHYNSKCVYSVKSG 62
            D  VA FIT   +WDV  ++H F   D +    +PISS +  D  +WHY+ +  YSV+SG
Sbjct: 1050 DTTVASFITADGNWDVTSISHSFCNEDRDLILSMPISSYNLQDSWLWHYDKRGNYSVRSG 1109

Query: 63   YKLSMMKNQEASLSNMDKEVSWWKKVWKMRVPGKVKIFVWKSFHNSIPTMVNLGIHHVPV 122
            YKL M     A+ ++ +   + W  +WK+ VP K+KIF+W+S H  IPT  NL +  +  
Sbjct: 1110 YKLYMHLKCNATSASTNYRGTQWNSIWKLTVPTKIKIFIWRSAHEHIPTAQNLLLRGIGE 1169

Query: 123  HGNCLVCKDEMETSDHAIFQCSRSREVWECLYP 155
               C +C D  E+  HA F C R+R++W  L+P
Sbjct: 1170 LPACTICGDRRESIIHAFFHCKRARQIWRTLFP 1202

[Close]

BLAST of Spg037346 vs. ExPASy TrEMBL
Match: A0A803Q6Z2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.8e-24
Identity = 60/168 (35.71%), Postives = 95/168 (56.55%), Query Frame = 0


Query: 2    KDALVADFITQSFHWDVHKLNHYFIGIDVEASQCLPIS-SSAPDKRIWHYNSKCVYSVKS 61
            +D  VADFIT S  WDV KL  +F   DV+    +P+S     D  +WHY+S   Y+VKS
Sbjct: 1693 RDVKVADFITHSRQWDVPKLQQFFTPPDVDRILSIPLSLFPCEDVLLWHYSSAGFYTVKS 1752

Query: 62   GYKLSMMKNQEASLSNMDKEVSWWKKVWKMRVPGKVKIFVWKSFHNSIPTMVNLGIHHVP 121
            GYKL+         S+   E +WW+  W +++P K++IF W+++H ++PT   L   H+ 
Sbjct: 1753 GYKLASDVPDSQPNSSHTTE-TWWQYFWGLKLPSKIRIFAWRAYHEALPTAAILQYRHIS 1812

Query: 122  VHGNCLVCKDEMETSDHAIFQCSRSREVWECLYPAMLTNLCTTMDIKD 169
                C +C+  +ET +HA F C+R+++VW+    ++  +L  T    D
Sbjct: 1813 SSPQCPLCQVHLETINHAFFWCNRAKQVWKNWDESINWSLSMTCSFSD 1859

[Close]

BLAST of Spg037346 vs. ExPASy TrEMBL
Match: A0A803P379 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.6e-23
Identity = 70/231 (30.30%), Postives = 108/231 (46.75%), Query Frame = 0


Query: 4   ALVADFITQSFHWDVHKLNHYFIGIDVEASQCLPISSSAPDKRIWHYNSKCVYSVKSGYK 63
           A ++ FI     W+VHKL ++F    VE    +PI  ++ D  IW ++S  + +VK  Y 
Sbjct: 62  AFISSFINHDSTWNVHKLQYFFPSHQVEHILKIPIDPTSTDSLIWGFHSSGIITVKYAYH 121

Query: 64  L--SMMKNQEASLSNMDKEVSWWKKVWKMRVPGKVKIFVWKSFHNSIPTMVNLGIHHVPV 123
           L  S+      S SN +  + WWK +W + VP K+K F+W++FH+ +P   NL +     
Sbjct: 122 LACSLTSVDVPSSSNPNPYLHWWKILWSLPVPPKIKHFIWRAFHHILPCAFNLFLKRSLP 181

Query: 124 HGNCLVCKDEMETSDHAIFQCSRSREVWECLYPAMLTNLCTTMDIKD--------RDKAG 183
           H NC +C    E+  HA+  CSR++ +W+              DIKD          K  
Sbjct: 182 HPNCSICGHNTESVTHALIGCSRAKSIWKSSRFKQFYLAYHRSDIKDFLIQALHNISKQD 241

Query: 184 YLILVTLCDMARFVFDTDVLIQGVHVGDMRAGVSYAMRIPPSHWPETDFLF 225
           + I +T    A+     D     +H    R   +   ++PPS  PET  LF
Sbjct: 242 FPIFITFICAAQCKHQDD----NLHSEATRIPPASQQQLPPSLSPETPSLF 288

[Close]

BLAST of Spg037346 vs. ExPASy TrEMBL
Match: A0A803NN93 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.3e-22
Identity = 55/150 (36.67%), Postives = 84/150 (56.00%), Query Frame = 0


Query: 5   LVADFITQSFHWDVHKLNHYFIGIDVEASQCLPISSSA-PDKRIWHYNSKCVYSVKSGYK 64
           +VAD+I+    WD+ KL   F  +DVE    +P+S +A  D  +WHY     Y+V SGY 
Sbjct: 646 IVADYISADHQWDIDKLTSDFSALDVENILKIPLSHNAGTDSWVWHYTDAESYTVNSGYH 705

Query: 65  L--SMMKNQEASLSNMDKEVSWWKKVWKMRVPGKVKIFVWKSFHNSIPTMVNLGIHHVPV 124
           L  SM   +++S S+     +WWK+ W + +P KVKIF W+  HN++P+  NL    +  
Sbjct: 706 LACSMASQEDSSCSSASS--TWWKQFWNLNLPSKVKIFAWRVMHNALPSASNLHHRRIIN 765

Query: 125 HGNCLVCKDEMETSDHAIFQCSRSREVWEC 152
              C +C +  E+  HA+F C  ++ VW C
Sbjct: 766 SSTCSLCTNAWESIGHALFSCKHAKAVWRC 793

[Close]

BLAST of Spg037346 vs. ExPASy TrEMBL
Match: A0A803QJ22 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.9e-22
Identity = 54/164 (32.93%), Postives = 91/164 (55.49%), Query Frame = 0


Query: 6   VADFITQSFHWDVHKLNHYFIGIDVEASQCLPIS-SSAPDKRIWHYNSKCVYSVKSGYKL 65
           V+D I     W+   LN  F+  D+   Q +P++     D  IWH+ S  VYSVKSGY L
Sbjct: 140 VSDLILNCRQWNYSLLNTLFLPSDIALIQSIPLTFVEHHDTMIWHHESTGVYSVKSGYIL 199

Query: 66  SMMKNQEASLSNMDKEVSWWKKVWKMRVPGKVKIFVWKSFHNSIPTMVNLGIHHVPVHGN 125
           +    ++  +S+ ++   WWKK W +++P K++IF+W++ H+ +P    L   H+     
Sbjct: 200 ATKLEEQQPMSSGNQAQLWWKKFWGLKLPSKIRIFLWRAIHDCLPVADILHTRHIADSSQ 259

Query: 126 CLVCKDEMETSDHAIFQCSRSREVWECLYPAMLTNLCTTMDIKD 169
           C +C    ET  HA+F C R ++VW+C   ++ + L   M++K+
Sbjct: 260 CTLCNRANETIFHALFHCKRPKKVWQCSDFSLHSILSRHMNLKE 303

[Close]

BLAST of Spg037346 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 1.1e-10
Identity = 38/168 (22.62%), Postives = 76/168 (45.24%), Query Frame = 0


Query: 3   DALVADFITQSFHWDVHKLNHYFIGIDVEASQCLPISSSAPDKRIWHYNSKCVYSVKSGY 62
           D+ ++ F+ QS H  +H++                  S  PDK IW+YN+   Y+V+SGY
Sbjct: 90  DSKISQFVDQSDHGFIHRI--------------YLAKSKKPDKIIWNYNTTGEYTVRSGY 149

Query: 63  KLSM--MKNQEASLSNMDKEVSWWKKVWKMRVPGKVKIFVWKSFHNSIPTMVNLGIHHVP 122
            L          +++     +    ++W + +  K+K F+W++   ++ T   L    + 
Sbjct: 150 WLLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHFLWRALSQALATTERLTTRGMR 209

Query: 123 VHGNCLVCKDEMETSDHAIFQCSRSREVWECLYPAMLTNLCTTMDIKD 169
           +  +C  C  E E+ +HA+F C  +   W     +++ N   + D ++
Sbjct: 210 IDPSCPRCHRENESINHALFTCPFATMAWRLSDSSLIRNQLMSNDFEE 243

[Close]

BLAST of Spg037346 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 57.4 bits (137), Expect = 6.8e-08
Identity = 24/64 (37.50%), Postives = 35/64 (54.69%), Query Frame = 0


Query: 86  KVWKMRVPGKVKIFVWKSFHNSIPTMVNLGIHHVPVHGNCLVCKDEMETSDHAIFQCSRS 145
           K+WK++   K+K F+WK    ++ T  NL   H+  H  C  C  E ETS H  F C  +
Sbjct: 17  KIWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYA 76

Query: 146 REVW 150
           ++VW
Sbjct: 77  QQVW 80

The following BLAST results are available for this feature:

BLAST of Spg037346 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158377.1	3.4e-25	39.22	uncharacterized protein LOC111024874 [Momordica charantia]	[more]
XP_030509050.1	3.7e-24	35.71	uncharacterized protein LOC115723712 [Cannabis sativa]	[more]
XP_030483481.1	1.6e-22	36.91	uncharacterized protein LOC115700065 [Cannabis sativa]	[more]
XP_030505314.1	1.6e-22	35.17	uncharacterized protein LOC115720302 [Cannabis sativa]	[more]
XP_030495196.1	1.3e-21	33.55	uncharacterized protein LOC115710989 [Cannabis sativa]	[more]

BLAST of Spg037346 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C2F6	1.9e-07	26.76	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of Spg037346 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DX30	1.6e-25	39.22	uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A803Q6Z2	1.8e-24	35.71	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A803P379	2.6e-23	30.30	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A803NN93	1.3e-22	36.67	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A803QJ22	2.9e-22	32.93	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]

BLAST of Spg037346 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09510.1	1.1e-10	22.62	Ribonuclease H-like superfamily protein	[more]
AT3G25270.1	6.8e-08	37.50	Ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 56..149 e-value: 1.4E-20 score: 73.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 684..709
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 711..729
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 681..729
None	No IPR available	PANTHER	PTHR46736:SF6	SUBFAMILY NOT NAMED	coord: 25..149
None	No IPR available	PANTHER	PTHR46736	FAMILY NOT NAMED	coord: 25..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg037346.1	Spg037346.1	mRNA