Spg037340 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg037340
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionAnaphase-promoting complex subunit 5
Locationscaffold8: 717369 .. 720061 (+)
RNA-Seq ExpressionSpg037340
SyntenySpg037340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCGTCACCTCGAGGTGCGCCTTGTGCCTTGAAAACACTGTCAATAACATATACTTTGACAATAGACTACATGTTTTGTTCTTCTCCCTCTCTCACGCACAACTAAAATAGATCGACATATCTCTACTTGATGATGTAAAAAGTGGCCTTTGATTGAAAATTGCCAGATTTATTTATTAAATCTTTGGATTATTATATTTGAACAAGATCTTATTGTGTGGACTATGCGCTAATAGTTTTATACCTTGAAAGTTTAGATGTGCTCAATGCATGCACTCATATTTTCATAAGCTGACTTCAATTCTTTTGGGTTGTTTAGGATATCATTTTTTTTAATATGACTTTACTGTAAATCTCTATCCCTCTCATCAAGGGGTTCTATCTCTCTCTTCAAGGTGTGAATCATTTAATTTTTAAATGGAAGGTCAAAATTTACATTCTAAACTTTTTATGGGGGTAAATTAACAAGGAACCTATATTTCGTAAAAGAAAAAGAAAAGCGGAACCTTTAAAATCTTTTTTTTAAACATGAACATGTAATCTCATATGTTTGAACATGCATTCCCTCACCTGGAAGTGCATATGGTTGTCAATGATATTTAACTCATTTTCCTTTTACAGAGGCCTTTAGTGCACTTAAAATAGCAGAAGAGAGGTTTCTATCTCTCTCGAAGTCAAGAATTTTACTATTAAAGTTACAGCTGGTTCATGAGCATGCTCTACACCGGTAATCTCTAGTGATATGATGAATATTTATGCTTTGCTCATTACCTTTGCTAAGTTTCTCGTATACTTTCGTTAGAGGTTGTTTGAAGCTTGCCCAGCAGGCTTGTAATGAACTTGGAGTTTTAGCCTCATCTGTTACTGGTGTTGATTTGGAGCTGAAAAACAGAGGCCAGTTTTCGTCATGCTCGGACATTGCTTGCAGCAAACCAGTTAAGCGAGGTTAGAACTTCATTGAAACTAAGCTCTGATATTTCTATGTTTGGATGTGTAGAAATTGTTCTGTTTCATCAAATTGTGGGAACATATCTTATTGCATCTAGAAGAGAGTTGACATTTGAACTAGTATAGGATCTTCTAGCATTTCCAGGTAAGTCAAAGATGAAAAGAGAATAAAGATCTCGTTCATATAGTTGATGATTGAGGTGATATACATTTTAATGTTGGGTGTCAGGGAGGATGTTGTTCTTTCTATTTGTTTGAATCATTTTCAAATGACTTGCTCAGTAGGTTTCATCATGGTCAATGATTTTATACGATGTCAGGTTATGCATTATTTAATTTATGCCTTCAAAATCTGAATGGAATAGATGTTGCATTATACCTTCAATGTTGGGTGAGGGTCTCAAGATTAATAGATGAAAGAGCTCCATCATGGTATCAACTGTGAACATTCGTTTGCTTTGCTTGGTCACCCCCTCATTTCCTTTGCATCTGGTGTTGATTCCATTGAAGTGGTTGAAAGTTGATTTCAGTAAATCTCAGAAAGATAATTCTTCTTGATTTGCATTCTCCTTTCATTTTGAATCTGGACCTATTGGACACAAAATTGAAAGTTCGAGGACCTATTTGAAACTTTTTAAAGTTTAAGGATCAAATTGACACAACCTTGAAATTTTAGAGACTAAACTTGTAATTGAACCAATCAGAAAGCGAGAAAGTTATGAGAGAACATTATTACATTTATCGGAGTCGAATACACACATACATAGAGCCCTAAGCTATTTAATGTACAAGTACAATTACAATGAAGATCGAATAACTAAGCTCTGCAATAGCTCATTTGATATGTGTGTGTCATATATAACTGAGCGTTGTAATACTCAGGTATACATTTATCGGCAATAATATTAATTCTGGAACATGGGCCAACCCTTACAAATGGGTGAGAAATTCTCAAGAGGTTTAACCCTTGGATAAGAATGAACGAGACATGTTTTTCATTTGCTTTTTGGTTGTCTTTATATCATCTTTTATTTTGGGCTGCTCATGAACATTCTATATTTGAGATGCTTCCTCATCAATTATATAGTCCAAGTATTGGGGAAATTAATATTGAAAAGATTATCCAATTGTCTGGACATGCTGTAGCAATATTTATTTTATAACATATCTTCAATTTCTTGATGTATTTCTCCCTACATTTCCTTACAATGACTATTATTGTTATTATTTCGCAGCAGCTCGTGTAGCACACTCCCTTTTCTGTTCTGGTTGAATTTCATCATCAACAGTTTCTGAAGATCCGGAGATTGTGCTGGATCCTTTGAAGCAAGCTTCTGAAGAGCTTCAGTTGTTGGAGGTATGTTACTAGTTACAACCAATGCACTTGAGTTTGAAAGAACAAATTGAACTTTTGCAGATTTCTTGATCAAATTTGCATCTCTTGTTTCGCCTCCCAAATGTGCAAAAAGTACATGTTCTTGTCATGTCATATGTGAAAATATTGAATTTAACAAAGTCTTATGTGCAACATTGTCCCAGCAACCTTATATAGCATCAATGCAGTTTTGCATTTATTTTATCTCTCTGTTATTGATCAGATGACTCTCTCTCTCTCTATATATATATATCATTAACGGAAGCTGCAATGTTCTGTTTCTGCATTCTATTTCTTTATATCGGTTACTCATCAGATGCTTCTCTCTGTGTGTGTGTGTCTCAGTATTATGAAATGGCAGCTTAA

mRNA sequence

ATGGCTCAGGCCTTTAGTGCACTTAAAATAGCAGAAGAGAGGTTTCTATCTCTCTCGAAGTCAAGAATTTTACTATTAAAGTTACAGCTGGTTCATGAGCATGCTCTACACCGAGGTTGTTTGAAGCTTGCCCAGCAGGCTTGTAATGAACTTGGAGTTTTAGCCTCATCTGTTACTGGTGTTGATTTGGAGCTGAAAAACAGAGGCCAGTTTTCGTCATGCTCGGACATTGCTTGCAGCAAACCAGTTAAGCGAGTTTCTGAAGATCCGGAGATTGTGCTGGATCCTTTGAAGCAAGCTTCTGAAGAGCTTCAGTTGTTGGAGTATTATGAAATGGCAGCTTAA

Coding sequence (CDS)

ATGGCTCAGGCCTTTAGTGCACTTAAAATAGCAGAAGAGAGGTTTCTATCTCTCTCGAAGTCAAGAATTTTACTATTAAAGTTACAGCTGGTTCATGAGCATGCTCTACACCGAGGTTGTTTGAAGCTTGCCCAGCAGGCTTGTAATGAACTTGGAGTTTTAGCCTCATCTGTTACTGGTGTTGATTTGGAGCTGAAAAACAGAGGCCAGTTTTCGTCATGCTCGGACATTGCTTGCAGCAAACCAGTTAAGCGAGTTTCTGAAGATCCGGAGATTGTGCTGGATCCTTTGAAGCAAGCTTCTGAAGAGCTTCAGTTGTTGGAGTATTATGAAATGGCAGCTTAA

Protein sequence

MAQAFSALKIAEERFLSLSKSRILLLKLQLVHEHALHRGCLKLAQQACNELGVLASSVTGVDLELKNRGQFSSCSDIACSKPVKRVSEDPEIVLDPLKQASEELQLLEYYEMAA
Homology
[Close]
BLAST of Spg037340 vs. NCBI nr
Match: TYK16328.1 (anaphase-promoting complex subunit 5 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 122.9 bits (307), Expect = 1.8e-24
Identity = 91/215 (42.33%), Postives = 99/215 (46.05%), Query Frame = 0 

Query: 3   QAFSALKIAEERFLSLSKSRILLLKLQLVHEHALHRGCLKLAQQACNELGVLASSVTGVD 62
           +AFSALKIAEERFLSL+KSRILLLKLQL+HEHALHRGCLKLAQQACNELGVLASSVT VD
Sbjct: 77  EAFSALKIAEERFLSLAKSRILLLKLQLIHEHALHRGCLKLAQQACNELGVLASSVTSVD 136

Query: 63  LELKNRGQF---------------------------------------------SSCS-- 115
           L+LK    F                                             S C   
Sbjct: 137 LDLKTEASFRHARTLLAANQFSEVQNASVLLLLAEIHKKSGNAVVGLPYALASLSFCQSF 196

[Close]
BLAST of Spg037340 vs. NCBI nr
Match: XP_022142793.1 (anaphase-promoting complex subunit 5 [Momordica charantia] >XP_022142794.1 anaphase-promoting complex subunit 5 [Momordica charantia])

HSP 1 Score: 121.3 bits (303), Expect = 5.3e-24
Identity = 94/233 (40.34%), Postives = 102/233 (43.78%), Query Frame = 0 

Query: 3   QAFSALKIAEERFLSLSKSRILLLKLQLVHEHALHRGCLKLAQQACNELGVLASSVTGVD 62
           +AFSALK+AEERFLSLSKSRILLLKLQLVHEHALHRGCLKLA+QACNELGVLASSVTGVD
Sbjct: 645 EAFSALKVAEERFLSLSKSRILLLKLQLVHEHALHRGCLKLARQACNELGVLASSVTGVD 704

Query: 63  LELK------------NRGQFSSCSDIACS------------------------------ 115
           LELK            +  QFS  + +A S                              
Sbjct: 705 LELKTEASFRYARTLLSANQFSEAAHVAHSLFCMCYKYNLQVQNASVLLLLAEIHKKSGN 764

[Close]
BLAST of Spg037340 vs. NCBI nr
Match: XP_011653278.1 (anaphase-promoting complex subunit 5 isoform X1 [Cucumis sativus] >XP_031739826.1 anaphase-promoting complex subunit 5 isoform X1 [Cucumis sativus] >KGN53549.1 hypothetical protein Csa_014885 [Cucumis sativus])

HSP 1 Score: 121.3 bits (303), Expect = 5.3e-24
Identity = 94/233 (40.34%), Postives = 100/233 (42.92%), Query Frame = 0 

Query: 3   QAFSALKIAEERFLSLSKSRILLLKLQLVHEHALHRGCLKLAQQACNELGVLASSVTGVD 62
           +AFSALKIAEERFLSLSKSRILLLKLQLVHEHALHRGCLKLAQQACNELGVLASSVT VD
Sbjct: 642 EAFSALKIAEERFLSLSKSRILLLKLQLVHEHALHRGCLKLAQQACNELGVLASSVTSVD 701

Query: 63  LELKNR------------GQFSSCSDIA-------------------------------- 115
           L+LK               QFS  + +A                                
Sbjct: 702 LDLKTEASFRHARTLLAANQFSEAARVAHSLFCLCYKYNLQVQNASVLLLLAEIHKKSGN 761

[Close]
BLAST of Spg037340 vs. NCBI nr
Match: XP_031739827.1 (anaphase-promoting complex subunit 5 isoform X2 [Cucumis sativus])

HSP 1 Score: 121.3 bits (303), Expect = 5.3e-24
Identity = 94/233 (40.34%), Postives = 100/233 (42.92%), Query Frame = 0 

Query: 3   QAFSALKIAEERFLSLSKSRILLLKLQLVHEHALHRGCLKLAQQACNELGVLASSVTGVD 62
           +AFSALKIAEERFLSLSKSRILLLKLQLVHEHALHRGCLKLAQQACNELGVLASSVT VD
Sbjct: 534 EAFSALKIAEERFLSLSKSRILLLKLQLVHEHALHRGCLKLAQQACNELGVLASSVTSVD 593

Query: 63  LELKNR------------GQFSSCSDIA-------------------------------- 115
           L+LK               QFS  + +A                                
Sbjct: 594 LDLKTEASFRHARTLLAANQFSEAARVAHSLFCLCYKYNLQVQNASVLLLLAEIHKKSGN 653

[Close]
BLAST of Spg037340 vs. NCBI nr
Match: XP_038899012.1 (anaphase-promoting complex subunit 5 isoform X1 [Benincasa hispida] >XP_038899021.1 anaphase-promoting complex subunit 5 isoform X1 [Benincasa hispida] >XP_038899030.1 anaphase-promoting complex subunit 5 isoform X1 [Benincasa hispida])

HSP 1 Score: 120.6 bits (301), Expect = 9.1e-24
Identity = 93/233 (39.91%), Postives = 102/233 (43.78%), Query Frame = 0 

Query: 3   QAFSALKIAEERFLSLSKSRILLLKLQLVHEHALHRGCLKLAQQACNELGVLASSVTGVD 62
           +AF+ALK+AEERFLSLSKSRILLLKLQL+HEHALHRGCLKLAQQACNELGVLASSVTGVD
Sbjct: 642 EAFTALKVAEERFLSLSKSRILLLKLQLIHEHALHRGCLKLAQQACNELGVLASSVTGVD 701

Query: 63  LELKNR------------GQFSSCSDIA------CSK----------------------- 115
           L+LK               QFS  + +A      C K                       
Sbjct: 702 LDLKTEASFRHARTLLAANQFSEAARVAHSLFCLCHKYNLQVQNASVLLLLAEIHKKSGN 761

[Close]
BLAST of Spg037340 vs. ExPASy Swiss-Prot
Match: Q8H1U4 (Anaphase-promoting complex subunit 5 OS=Arabidopsis thaliana OX=3702 GN=APC5 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 5.0e-17
Identity = 46/78 (58.97%), Postives = 59/78 (75.64%), Query Frame = 0 

Query: 4   AFSALKIAEERFLSLSKSRILLLKLQLVHEHALHRGCLKLAQQACNELGVLASSVTGVDL 63
           AF+ALK+AEE+FL++SKS++LLLKLQL+HE ALH G LKLAQ+ CNELG LAS+  GVD+
Sbjct: 641 AFAALKVAEEKFLTVSKSKVLLLKLQLLHERALHCGNLKLAQRICNELGGLASTAMGVDM 700

Query: 64  ELKNRGQFSSCSDIACSK 82
           ELK          +  +K
Sbjct: 701 ELKVEASLREARTLLAAK 718


HSP 2 Score: 41.6 bits (96), Expect = 7.0e-03
Identity = 25/52 (48.08%), Postives = 33/52 (63.46%), Query Frame = 0 

Query: 63  LELKNRGQFSSCSDIACSKPVKRVSEDPEIVLDPLKQASEELQLLEYYEMAA 115
           LEL+ R      ++   S P   VS D + VLD L+QAS+ELQ LEY+E+AA
Sbjct: 822 LELRARAYIFE-ANCYLSDPSSSVSTDSDTVLDSLRQASDELQALEYHELAA 872

[Close]
BLAST of Spg037340 vs. ExPASy TrEMBL
Match: A0A5D3CYI4 (Anaphase-promoting complex subunit 5 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001100 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 8.9e-25
Identity = 91/215 (42.33%), Postives = 99/215 (46.05%), Query Frame = 0 

Query: 3   QAFSALKIAEERFLSLSKSRILLLKLQLVHEHALHRGCLKLAQQACNELGVLASSVTGVD 62
           +AFSALKIAEERFLSL+KSRILLLKLQL+HEHALHRGCLKLAQQACNELGVLASSVT VD
Sbjct: 77  EAFSALKIAEERFLSLAKSRILLLKLQLIHEHALHRGCLKLAQQACNELGVLASSVTSVD 136

Query: 63  LELKNRGQF---------------------------------------------SSCS-- 115
           L+LK    F                                             S C   
Sbjct: 137 LDLKTEASFRHARTLLAANQFSEVQNASVLLLLAEIHKKSGNAVVGLPYALASLSFCQSF 196

[Close]
BLAST of Spg037340 vs. ExPASy TrEMBL
Match: A0A6J1CMI3 (Anaphase-promoting complex subunit 5 OS=Momordica charantia OX=3673 GN=LOC111012830 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.6e-24
Identity = 94/233 (40.34%), Postives = 102/233 (43.78%), Query Frame = 0 

Query: 3   QAFSALKIAEERFLSLSKSRILLLKLQLVHEHALHRGCLKLAQQACNELGVLASSVTGVD 62
           +AFSALK+AEERFLSLSKSRILLLKLQLVHEHALHRGCLKLA+QACNELGVLASSVTGVD
Sbjct: 645 EAFSALKVAEERFLSLSKSRILLLKLQLVHEHALHRGCLKLARQACNELGVLASSVTGVD 704

Query: 63  LELK------------NRGQFSSCSDIACS------------------------------ 115
           LELK            +  QFS  + +A S                              
Sbjct: 705 LELKTEASFRYARTLLSANQFSEAAHVAHSLFCMCYKYNLQVQNASVLLLLAEIHKKSGN 764

[Close]
BLAST of Spg037340 vs. ExPASy TrEMBL
Match: A0A0A0KXJ1 (Anaphase-promoting complex subunit 5 OS=Cucumis sativus OX=3659 GN=Csa_4G081270 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.6e-24
Identity = 94/233 (40.34%), Postives = 100/233 (42.92%), Query Frame = 0 

Query: 3   QAFSALKIAEERFLSLSKSRILLLKLQLVHEHALHRGCLKLAQQACNELGVLASSVTGVD 62
           +AFSALKIAEERFLSLSKSRILLLKLQLVHEHALHRGCLKLAQQACNELGVLASSVT VD
Sbjct: 642 EAFSALKIAEERFLSLSKSRILLLKLQLVHEHALHRGCLKLAQQACNELGVLASSVTSVD 701

Query: 63  LELKNR------------GQFSSCSDIA-------------------------------- 115
           L+LK               QFS  + +A                                
Sbjct: 702 LDLKTEASFRHARTLLAANQFSEAARVAHSLFCLCYKYNLQVQNASVLLLLAEIHKKSGN 761

[Close]
BLAST of Spg037340 vs. ExPASy TrEMBL
Match: A0A5A7V702 (Anaphase-promoting complex subunit 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G001230 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.9e-23
Identity = 91/233 (39.06%), Postives = 100/233 (42.92%), Query Frame = 0 

Query: 3   QAFSALKIAEERFLSLSKSRILLLKLQLVHEHALHRGCLKLAQQACNELGVLASSVTGVD 62
           +AFSALKIAEERFLSL+KSRILLLKLQL+HEHALHRGCLKLAQQACNELGVLASSVT VD
Sbjct: 642 EAFSALKIAEERFLSLAKSRILLLKLQLIHEHALHRGCLKLAQQACNELGVLASSVTSVD 701

Query: 63  LELKNR------------GQFSSCSDIA-------------------------------- 115
           L+LK               QFS  + +A                                
Sbjct: 702 LDLKTEASFRHARTLLAANQFSEAARVAHSLFCLCYKYNLQVQNASVLLLLAEIHKKSGN 761

[Close]
BLAST of Spg037340 vs. ExPASy TrEMBL
Match: A0A1S3BSC5 (Anaphase-promoting complex subunit 5 OS=Cucumis melo OX=3656 GN=LOC103492966 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.9e-23
Identity = 91/233 (39.06%), Postives = 100/233 (42.92%), Query Frame = 0 

Query: 3   QAFSALKIAEERFLSLSKSRILLLKLQLVHEHALHRGCLKLAQQACNELGVLASSVTGVD 62
           +AFSALKIAEERFLSL+KSRILLLKLQL+HEHALHRGCLKLAQQACNELGVLASSVT VD
Sbjct: 642 EAFSALKIAEERFLSLAKSRILLLKLQLIHEHALHRGCLKLAQQACNELGVLASSVTSVD 701

Query: 63  LELKNR------------GQFSSCSDIA-------------------------------- 115
           L+LK               QFS  + +A                                
Sbjct: 702 LDLKTEASFRHARTLLAANQFSEAARVAHSLFCLCYKYNLQVQNASVLLLLAEIHKKSGN 761

[Close]
BLAST of Spg037340 vs. TAIR 10
Match: AT1G06590.1 (unknown protein; Has 380 Blast hits to 268 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 245; Fungi - 73; Plants - 49; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). )

HSP 1 Score: 88.6 bits (218), Expect = 3.6e-18
Identity = 46/78 (58.97%), Postives = 59/78 (75.64%), Query Frame = 0 

Query: 4   AFSALKIAEERFLSLSKSRILLLKLQLVHEHALHRGCLKLAQQACNELGVLASSVTGVDL 63
           AF+ALK+AEE+FL++SKS++LLLKLQL+HE ALH G LKLAQ+ CNELG LAS+  GVD+
Sbjct: 641 AFAALKVAEEKFLTVSKSKVLLLKLQLLHERALHCGNLKLAQRICNELGGLASTAMGVDM 700

Query: 64  ELKNRGQFSSCSDIACSK 82
           ELK          +  +K
Sbjct: 701 ELKVEASLREARTLLAAK 718


HSP 2 Score: 41.6 bits (96), Expect = 5.0e-04
Identity = 25/52 (48.08%), Postives = 33/52 (63.46%), Query Frame = 0 

Query: 63  LELKNRGQFSSCSDIACSKPVKRVSEDPEIVLDPLKQASEELQLLEYYEMAA 115
           LEL+ R      ++   S P   VS D + VLD L+QAS+ELQ LEY+E+AA
Sbjct: 822 LELRARAYIFE-ANCYLSDPSSSVSTDSDTVLDSLRQASDELQALEYHELAA 872

The following BLAST results are available for this feature:
BLAST of Spg037340 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK16328.11.8e-2442.33anaphase-promoting complex subunit 5 isoform X1 [Cucumis melo var. makuwa][more]
XP_022142793.15.3e-2440.34anaphase-promoting complex subunit 5 [Momordica charantia] >XP_022142794.1 anaph... [more]
XP_011653278.15.3e-2440.34anaphase-promoting complex subunit 5 isoform X1 [Cucumis sativus] >XP_031739826.... [more]
XP_031739827.15.3e-2440.34anaphase-promoting complex subunit 5 isoform X2 [Cucumis sativus][more]
XP_038899012.19.1e-2439.91anaphase-promoting complex subunit 5 isoform X1 [Benincasa hispida] >XP_03889902... [more]
BLAST of Spg037340 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8H1U45.0e-1758.97Anaphase-promoting complex subunit 5 OS=Arabidopsis thaliana OX=3702 GN=APC5 PE=... [more]
BLAST of Spg037340 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CYI48.9e-2542.33Anaphase-promoting complex subunit 5 isoform X1 OS=Cucumis melo var. makuwa OX=1... [more]
A0A6J1CMI32.6e-2440.34Anaphase-promoting complex subunit 5 OS=Momordica charantia OX=3673 GN=LOC111012... [more]
A0A0A0KXJ12.6e-2440.34Anaphase-promoting complex subunit 5 OS=Cucumis sativus OX=3659 GN=Csa_4G081270 ... [more]
A0A5A7V7022.9e-2339.06Anaphase-promoting complex subunit 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A1S3BSC52.9e-2339.06Anaphase-promoting complex subunit 5 OS=Cucumis melo OX=3656 GN=LOC103492966 PE=... [more]
BLAST of Spg037340 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G06590.13.6e-1858.97unknown protein; Has 380 Blast hits to 268 proteins in 109 species: Archae - 0; ... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12830:SF11BNAC08G44850D PROTEINcoord: 3..68
coord: 79..114
IPR037679Anaphase-promoting complex subunit 5PANTHERPTHR12830ANAPHASE-PROMOTING COMPLEX SUBUNIT 5coord: 79..114
IPR037679Anaphase-promoting complex subunit 5PANTHERPTHR12830ANAPHASE-PROMOTING COMPLEX SUBUNIT 5coord: 3..68

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg037340.1Spg037340.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007049 cell cycle
biological_process GO:0051301 cell division
cellular_component GO:0005680 anaphase-promoting complex
molecular_function GO:0000166 nucleotide binding