Spg037268 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg037268
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold3: 22512939 .. 22514835 (+)
RNA-Seq Expression	Spg037268
Synteny	Spg037268

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGAAGAGGATGACTTTGCGAGAGAAAGAGATCTTGAAGAAGAAAAGAAAAGAGAAGAGGAAAGACAAGAGGCCGAGAGGGCCAAGTTAGCTGAGGAAGAAGAGAGAAAATTAGGTGAAAACCTCACGAGGGTAGCCATTGAATTGCAACTCCTTGAGGAAGAAAAACAGAGAAGAGAAGAATTGAAAGAAGAAGAGAAAAGAAGAAAGGAAGCGGAAGACTTCCTTGCAGCTTTTGAGCCACTCCACAAGGCTCAAAGTGAGGCTGAATTGCTGCAAAGAAGGGAAGAAGAAGCCCAACAGTGGCCAAGTGAAGAAAGTTCAGAAAAAGAAAAAGAAAGAGAGTAAGGGGATGATGGCCAAAATGCGACAGCATTTGGGCCGCATTCTGAAGAAGGCCAAGCTGAGGCCACAGAAGCACAGCCAGCTGATTAGGTTTTCGAACCTCTATTCAAAGATGACCCACCAGCAGCTGATAGCACCTCTTTGGGAGAGAGGAGGGATGAAGAAAAGAAAGAAAACCAGGAGGTCGAGACCTCCAGTGACTCTAAAACAGAATTCGACTCAAAGATTAAGGAGCTGAATGATGACCAAGTTCCTATCTCTGCAGCATTGAGGAGGAAGAGAAGAAGAGAGATTAAAGCTGAACGGAGGACCAAGAACAAGAATGACCCTATATTTGCCAAGAGGTCGAGGACTAGGTCCATGGACGCCTCTCCTGCAATTCCTCCTACCGTCTCACCCGCCAAGACAAAGGGCAAATCACCTAAGGCTGCATCTCCTAAAAATCCATTCCCCGAGGTATTCAGAGATGTAGATTTTTAGGAACGGATGGAGATCATGAGAAAAAAAGGATTTCCTCAATGAGAAGGGATTCTCTAACAGAGTGGGTGCACTGCCAGAGTTCGTAAGTAGAGTTATCTCCCAGTACAAGTGGCAGGAGTTTTGTGCTCACCCTCGGGAGGCTGTAGTGCCTTTAGTTCGTGAGTTTTACGCCGGCCTGAGGGAGGAAAGCATCAGTATGGCGGTGGTGAGAGGCAAGACGGCCAGCTTCTCTTCAGTAGACATCAACAGGGTGAACAAAATCAAGGCACCCCTGAATCCAAGAGGGAACGATGTTATTAGGAACCCCTCGGCCGAGAAAATGAAGGAAGCACTGAAGCTTGTGGCCAACAAGGGTGTTCAATGGAAATAGTCCCAGATGAAGGTGAAGACTTTAGTGCCAAGCGATCTAAAGTCAGAATCGGCAGTTTGGCTTCACTTTCTGAAGAATCGCTTGACGCCAACAACCCACGACAGCACGATCTCAGTAGATAGAGTGATGCTACTCTACTGTATCATGAAGGGATTGGAGATCAACATCGGGAGCATAATCAGGGACGAGATTATAGCATGTGCAAGAAAAAGAGCAGGTAAACTTTTCTTTGGATCACTTATCACCCAACTCTGTCAGAGGGTGAAGATAGTTCCAGGCAAGGACGAGGAGCGTCATTTCTTCAAGCCAACCATTGACCTGTCCTTGATCTGGAATATCCAACAGAATAACATCCAATGGAAAGATAAAGCCTCCACATCTTAGGCCACTCCACCATCAGGGCCGAATGTAGCTTCTCCATCCCAAGACACTCCTTTTATAGGGCCCTCACCGTCATATGAAGCCCTAGCCAATTCCTACCAGCAGCTAGATCAAATCTGGGATAACCTGAAGACATATTGGACATATGCAAAGGAGAGGGATGAAGCCATTAGAGAGTTCTATCTCTCTATCGCCCCAAGTATTGCTCCGGGTTTTCCAGATTTCCCTCAATTGCTGCAACCTCAAGAAGACAAGGATTCTGATGAAGATGAAGAAGAAAATGAAGAAGAGAAAGAGAGTTCCTCGGACGAGGACTAG

mRNA sequence

ATGATGGAAGAGGATGACTTTGCGAGAGAAAGAGATCTTGAAGAAGAAAAGAAAAGAGAAGAGGAAAGACAAGAGGCCGAGAGGGCCAAGTTAGCTGAGGAAGAAGAGAGAAAATTAGGTGAAAACCTCACGAGGGTAGCCATTGAATTGCAACTCCTTGAGGAAGAAAAACAGAGAAGAGAAGAATTGAAAGAAGAAGAGAAAAGAAGAAAGGAAGCGGAAGACTTCCTTGCAGCTTTTGAGCCACTCCACAAGGCTCAAAGTGAGGCTGAATTGCTGCAAAGAAGGGAAGAAGAAGCCCAACAGTGGCCAAGTGAAGAAAATGACCCACCAGCAGCTGATAGCACCTCTTTGGGAGAGAGGAGGGATGAAGAAAAGAAAGAAAACCAGGAGGTCGAGACCTCCAGTGACTCTAAAACAGAATTCGACTCAAAGATTAAGGAGCTGAATGATGACCAAGTTCCTATCTCTGCAGCATTGAGGAGGAAGAGAAGAAGAGAGATTAAAGCTGAACGGAGGACCAAGAACAAGAATGACCCTATATTTGCCAAGAGGTCGAGGACTAGGTCCATGGACGCCTCTCCTGCAATTCCTCCTACCGTCTCACCCGCCAAGACAAAGGGCAAATCACCTAAGGCTGCATCTCCTAAAAATCCATTCCCCGAGTACAAGTGGCAGGAGTTTTGTGCTCACCCTCGGGAGGCTGTAGTGCCTTTAGTTCGTGAGTTTTACGCCGGCCTGAGGGAGGAAAGCATCAGTATGGCGGTGGTGAGAGGCAAGACGGCCAGCTTCTCTTCAGTAGACATCAACAGGGTGAACAAAATCAAGGCACCCCTGAATCCAAGAGGGAACGATGTTATTAGGAACCCCTCGGCCGAGAAAATGAAGGAAGCACTGAAGCTTGTGGCCAACAAGGGTGTTCAATGGAAATACACGATCTCAGTAGATAGAGTGATGCTACTCTACTGTATCATGAAGGGATTGGAGATCAACATCGGGAGCATAATCAGGGACGAGATTATAGCATGTGCAAGAAAAAGAGCAGGGCCCTCACCGTCATATGAAGCCCTAGCCAATTCCTACCAGCAGCTAGATCAAATCTGGGATAACCTGAAGACATATTGGACATATGCAAAGGAGAGGGATGAAGCCATTAGAGAGTTCTATCTCTCTATCGCCCCAAGTATTGCTCCGGGTTTTCCAGATTTCCCTCAATTGCTGCAACCTCAAGAAGACAAGGATTCTGATGAAGATGAAGAAGAAAATGAAGAAGAGAAAGAGAGTTCCTCGGACGAGGACTAG

Coding sequence (CDS)

ATGATGGAAGAGGATGACTTTGCGAGAGAAAGAGATCTTGAAGAAGAAAAGAAAAGAGAAGAGGAAAGACAAGAGGCCGAGAGGGCCAAGTTAGCTGAGGAAGAAGAGAGAAAATTAGGTGAAAACCTCACGAGGGTAGCCATTGAATTGCAACTCCTTGAGGAAGAAAAACAGAGAAGAGAAGAATTGAAAGAAGAAGAGAAAAGAAGAAAGGAAGCGGAAGACTTCCTTGCAGCTTTTGAGCCACTCCACAAGGCTCAAAGTGAGGCTGAATTGCTGCAAAGAAGGGAAGAAGAAGCCCAACAGTGGCCAAGTGAAGAAAATGACCCACCAGCAGCTGATAGCACCTCTTTGGGAGAGAGGAGGGATGAAGAAAAGAAAGAAAACCAGGAGGTCGAGACCTCCAGTGACTCTAAAACAGAATTCGACTCAAAGATTAAGGAGCTGAATGATGACCAAGTTCCTATCTCTGCAGCATTGAGGAGGAAGAGAAGAAGAGAGATTAAAGCTGAACGGAGGACCAAGAACAAGAATGACCCTATATTTGCCAAGAGGTCGAGGACTAGGTCCATGGACGCCTCTCCTGCAATTCCTCCTACCGTCTCACCCGCCAAGACAAAGGGCAAATCACCTAAGGCTGCATCTCCTAAAAATCCATTCCCCGAGTACAAGTGGCAGGAGTTTTGTGCTCACCCTCGGGAGGCTGTAGTGCCTTTAGTTCGTGAGTTTTACGCCGGCCTGAGGGAGGAAAGCATCAGTATGGCGGTGGTGAGAGGCAAGACGGCCAGCTTCTCTTCAGTAGACATCAACAGGGTGAACAAAATCAAGGCACCCCTGAATCCAAGAGGGAACGATGTTATTAGGAACCCCTCGGCCGAGAAAATGAAGGAAGCACTGAAGCTTGTGGCCAACAAGGGTGTTCAATGGAAATACACGATCTCAGTAGATAGAGTGATGCTACTCTACTGTATCATGAAGGGATTGGAGATCAACATCGGGAGCATAATCAGGGACGAGATTATAGCATGTGCAAGAAAAAGAGCAGGGCCCTCACCGTCATATGAAGCCCTAGCCAATTCCTACCAGCAGCTAGATCAAATCTGGGATAACCTGAAGACATATTGGACATATGCAAAGGAGAGGGATGAAGCCATTAGAGAGTTCTATCTCTCTATCGCCCCAAGTATTGCTCCGGGTTTTCCAGATTTCCCTCAATTGCTGCAACCTCAAGAAGACAAGGATTCTGATGAAGATGAAGAAGAAAATGAAGAAGAGAAAGAGAGTTCCTCGGACGAGGACTAG

Protein sequence

MMEEDDFARERDLEEEKKREEERQEAERAKLAEEEERKLGENLTRVAIELQLLEEEKQRREELKEEEKRRKEAEDFLAAFEPLHKAQSEAELLQRREEEAQQWPSEENDPPAADSTSLGERRDEEKKENQEVETSSDSKTEFDSKIKELNDDQVPISAALRRKRRREIKAERRTKNKNDPIFAKRSRTRSMDASPAIPPTVSPAKTKGKSPKAASPKNPFPEYKWQEFCAHPREAVVPLVREFYAGLREESISMAVVRGKTASFSSVDINRVNKIKAPLNPRGNDVIRNPSAEKMKEALKLVANKGVQWKYTISVDRVMLLYCIMKGLEINIGSIIRDEIIACARKRAGPSPSYEALANSYQQLDQIWDNLKTYWTYAKERDEAIREFYLSIAPSIAPGFPDFPQLLQPQEDKDSDEDEEENEEEKESSSDED

Homology

[Close]

BLAST of Spg037268 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii])

HSP 1 Score: 72.0 bits (175), Expect = 1.4e-08
Identity = 59/225 (26.22%), Postives = 100/225 (44.44%), Query Frame = 0


Query: 160 LRRKRRREIKAERRTKNKNDPIFAKRSRTRSMDASPAIPPTVSPAKTKGKSPKAASPKNP 219
           ++R  R+  KA +      +  +    + R ++A       +  ++T G+ P  A     
Sbjct: 3   IKRVARKAHKAVKFETEAAETRYENNIQNRPLNAEKGF--VLDNSETMGQLPFIA---QV 62

Query: 220 FPEYKWQEFCAHPREAVVPLVREFYAGLREESISMAVVRGKTASFSSVDINRVNKIKAPL 279
             ++ W++FCAHP + +VPLVREFYA L +   +   VRG   S+S   IN V  +  P+
Sbjct: 63  ITQHNWKQFCAHPEDPIVPLVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFGLGDPV 122

Query: 280 NPRGNDVIRNPSAEKMKEALKLVANKGVQWKY---------------------------- 339
           +   ++ I N +   +   L+ VA  G +W                              
Sbjct: 123 DEH-SEFIENITEHDLITVLETVAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHFLKSHL 182

Query: 340 -------TISVDRVMLLYCIMKGLEINIGSIIRDEIIACARKRAG 350
                  T+S DR++LL+ ++ G  IN+G +I  EI ACA ++ G
Sbjct: 183 LPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTG 221

[Close]

BLAST of Spg037268 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 64.3 bits (155), Expect = 2.9e-06
Identity = 89/386 (23.06%), Postives = 144/386 (37.31%), Query Frame = 0


Query: 160 LRRKRRREIKAERRTKNKNDPIFAKRSRTRSMDASPAIPPTVSPAKTKGKSPKAASPKNP 219
           ++R  R+  KA +         +    + R ++A       +  ++T G+ P  A     
Sbjct: 12  IKRVARKAHKAVKFETEAAATRYENNIQNRPLNAEKGF--VLDNSETMGQLPFIA---QV 71

Query: 220 FPEYKWQEFCAHPREAVVPLVREFYAGLREESISMAVVRGKTASFSSVDINRVNKIKAPL 279
             ++ W++FCAHP + +VPLVREFYA L +   +   VRG   S+S   IN V  +  P+
Sbjct: 72  ITQHNWKQFCAHPEDPIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGDPV 131

Query: 280 NPRGNDVIRNPSAEKMKEALKLVANKGVQWKY---------------------------- 339
           +   ++ I+N + + +   L+ VA  G +W                              
Sbjct: 132 DEH-SEFIQNITQQDLITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRL 191

Query: 340 -------TISVDRVMLLYCIMKGLEINIGSIIRDEIIACARKRAG--------------- 399
                  T+S DR++LL+ ++ G  IN+G +I  EI ACA ++ G               
Sbjct: 192 LPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNA 251

Query: 400 ------------------------------------PSPSYEALANSYQQLDQIWDNLKT 432
                                               PS S  A A+S +    I   LK 
Sbjct: 252 RAPFLVNEEKLHNTGEIDAIAVARIAQEGPTESTQQPSSSRPATASSNRTNGDILQQLKA 311

[Close]

BLAST of Spg037268 vs. NCBI nr
Match: EXB49850.1 (hypothetical protein L484_000844 [Morus notabilis])

HSP 1 Score: 59.7 bits (143), Expect = 7.2e-05
Identity = 68/249 (27.31%), Postives = 103/249 (41.37%), Query Frame = 0


Query: 225 WQEFCAHPREAVVPLVREFYAGLREESISMAVVRGKTASFSSVDINRVNKIKAPLNPRGN 284
           WQ FC HP + +VPLV+EFYA L+ +  +   V     +F+S  IN V  I     P  +
Sbjct: 88  WQIFCRHPIDPIVPLVKEFYANLQNQGQNTVFVWEIDITFTSNYINGVLGI-----PNQD 147

Query: 285 D----VIRNPSAEKMKEALKLVANKGVQWKY----------------------------- 344
           D    +I +   E++KE LK +A  G QW                               
Sbjct: 148 DEFVELITDAIEEQLKEVLKTIAILGAQWLLSAKGSYTCNRHELQPAAKVWYHFLASRLL 207

Query: 345 ------TISVDRVMLLYCIMKGLEINIGSIIRDEIIACARKRAG----PSPSYEALANSY 404
                 TIS +R +LLY ++ G  IN+G +I D+I ACA K  G    PS   E    S+
Sbjct: 208 LSTHGKTISRNRAILLYAVLVGKPINVGRLIIDQIRACAEKGKGGLYFPSLISELCIQSH 267

Query: 405 QQLDQIWDNLKTYWTYAKERDEAIREFYLSIAPSIAPGFPDFPQLLQPQEDKDSDEDEEE 431
                        W  ++ R        L     I+ G        + ++ +  +E+EE+
Sbjct: 268 -----------VAWEASEPRLRNTGAMDLVAITRISSG--------RSEKSEKGEEEEEQ 312

[Close]

BLAST of Spg037268 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 6.8e-09
Identity = 59/225 (26.22%), Postives = 100/225 (44.44%), Query Frame = 0


Query: 160 LRRKRRREIKAERRTKNKNDPIFAKRSRTRSMDASPAIPPTVSPAKTKGKSPKAASPKNP 219
           ++R  R+  KA +      +  +    + R ++A       +  ++T G+ P  A     
Sbjct: 3   IKRVARKAHKAVKFETEAAETRYENNIQNRPLNAEKGF--VLDNSETMGQLPFIA---QV 62

Query: 220 FPEYKWQEFCAHPREAVVPLVREFYAGLREESISMAVVRGKTASFSSVDINRVNKIKAPL 279
             ++ W++FCAHP + +VPLVREFYA L +   +   VRG   S+S   IN V  +  P+
Sbjct: 63  ITQHNWKQFCAHPEDPIVPLVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFGLGDPV 122

Query: 280 NPRGNDVIRNPSAEKMKEALKLVANKGVQWKY---------------------------- 339
           +   ++ I N +   +   L+ VA  G +W                              
Sbjct: 123 DEH-SEFIENITEHDLITVLETVAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHFLKSHL 182

Query: 340 -------TISVDRVMLLYCIMKGLEINIGSIIRDEIIACARKRAG 350
                  T+S DR++LL+ ++ G  IN+G +I  EI ACA ++ G
Sbjct: 183 LPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTG 221

[Close]

BLAST of Spg037268 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-06
Identity = 89/386 (23.06%), Postives = 144/386 (37.31%), Query Frame = 0


Query: 160 LRRKRRREIKAERRTKNKNDPIFAKRSRTRSMDASPAIPPTVSPAKTKGKSPKAASPKNP 219
           ++R  R+  KA +         +    + R ++A       +  ++T G+ P  A     
Sbjct: 12  IKRVARKAHKAVKFETEAAATRYENNIQNRPLNAEKGF--VLDNSETMGQLPFIA---QV 71

Query: 220 FPEYKWQEFCAHPREAVVPLVREFYAGLREESISMAVVRGKTASFSSVDINRVNKIKAPL 279
             ++ W++FCAHP + +VPLVREFYA L +   +   VRG   S+S   IN V  +  P+
Sbjct: 72  ITQHNWKQFCAHPEDPIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGDPV 131

Query: 280 NPRGNDVIRNPSAEKMKEALKLVANKGVQWKY---------------------------- 339
           +   ++ I+N + + +   L+ VA  G +W                              
Sbjct: 132 DEH-SEFIQNITQQDLITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRL 191

Query: 340 -------TISVDRVMLLYCIMKGLEINIGSIIRDEIIACARKRAG--------------- 399
                  T+S DR++LL+ ++ G  IN+G +I  EI ACA ++ G               
Sbjct: 192 LPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNA 251

Query: 400 ------------------------------------PSPSYEALANSYQQLDQIWDNLKT 432
                                               PS S  A A+S +    I   LK 
Sbjct: 252 RAPFLVNEEKLHNTGEIDAIAVARIAQEGPTESTQQPSSSRPATASSNRTNGDILQQLKA 311

The following BLAST results are available for this feature:

BLAST of Spg037268 vs. NCBI nr


Match Name	E-value	Identity	Description
PON35554.1	1.4e-08	26.22	hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]	[more]
PON46472.1	2.9e-06	23.06	hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]	[more]
EXB49850.1	7.2e-05	27.31	hypothetical protein L484_000844 [Morus notabilis]	[more]

BLAST of Spg037268 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg037268 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P5AGA5	6.8e-09	26.22	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A2P5BCG4	1.4e-06	23.06	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]

BLAST of Spg037268 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 43..76
None	No IPR available	COILS	Coil	Coil	coord: 4..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 412..433
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 400..433

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg037268.1	Spg037268.1	mRNA