Spg037194 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg037194
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ribonuclease H
Location	scaffold5: 24295319 .. 24300184 (+)
RNA-Seq Expression	Spg037194
Synteny	Spg037194

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCCCTACCCTCTTTATGGCACGAGAGGGATTTCTGTTTGTTGGTTGGACCACAAACAGGTTGTTCATTAGAGGAGCACTGGTACTTAAGGACCAAGAGGTAGCCCAGGGGTAAAACGAAATTTGACCTAGTTGGGGTACGAACACACGTGAAGGGCTAACTTGCTGTTGACGGTCGATATCCGTGGACACAGAAATATATCTGCAGTGAGAAGAGTGCAGCTGTGGTTCTTTAGTGGAGTGAACCACAGTTAACGAATATTGATTAACTTGGTTAATGAGTTTAGCCAACTAATCTCATATCGTTGGAGCTTCTGATCTGTAGGTCCATCAGGTCCCACCGGTAGCTCTATAAGGGCGTTGAGGTAAATTTCTAAGGTTGAATTAAGTATTCGAAGGGGTTCGAATATTAAACTAAAATATGAATTTGATTCATATTAAAACTATAGGTTATAATTAATGTACATTGGATGTATATTAATACTATAGTTTTATGAGAGAGAATAATAATAATTGAATATATGATGTTCAATTTTATTATTTTAAAATTAAATAATTTTGAATTAGTTAATTGTTTTAGTTTAATTAAATTTGATTTAATTAAACTATAAGATAAGAGGGATATTAATTTAAATTAGATTTAAATTAATGTTATTTTAATTAATATTGATTAATTAAAATTTAATTAATTGTAATTTAAAATTGTGATTTTAAAATTATGATTAATTAAAAATATCAGGTAACTGATATTTCAGTTACCTGATATTATGCGTGGTTTTAAAAAGAAATGGGCAATTCAGTTTTGAGATAACGCTCTCATTCACGCCAGACTCCCTCTCTCTCGCCCTATCTCTCTCTCTCGTTCTCTCCTCTCCCTCTGTGGATACAGAGAATTATTTTCCAGAGAAAAACCTTAGTTTAGGGGTTCCCACAAGCCACTCAACGCACATTCCCTTTGAGAATACTGGTGAATCCTCGTGGTGGTGTTCGTGGCGATTTTTCCAGCGATATCAAGGTTCAATTGCTGCTGGTTTTGAGAGCTATTCGGAGATTTTTTGGCGAAACGTTCAAGAATTTCTTCAAGGGTAAGGTTTTTCTTAAACTAGGATCAATAGGATCCAATATTATAGATTAGATCTATAATTTTTAATATGTTCCAGCATGCTTTAATGATTTTTTACAGCATGACTATTTCTCCTTTTCTTGCTGTAAATTTTATGGTTTTGCCGTCGTATTGGTTTCCCAATCGATTTTTAAACCGATAAGATTCTCTGATCGTTTCCGCTGCGCTAGGGTTTTTTATCTCTGCACATACTCCTCTGGTTGTTGCAAGCAACATCTCAAAGCTGATTGAAGAATCCTCTAAGGATAAGGTTGCAGTCAAAGAAAACCCACTGTTCGAATATGTCGTTCCAACATCTAAGCAGCCAAAGGATACACTAAGTCCTGATGTGATGTCCGTCATGATGGCTGATGTAGATCAGGATGAAAGAATGGCAGAGATGGAAAGGAAACTCAATCTTTTAATGAAGGCAGTTGATGAGAGAGATCTTGGGATTGCCTATTTGAAGAACCAGCTGCAAAACCGAGAAACGGCTGAGTCTAGCCAGACCCCTGCTGCAGGAAAGAATGATAAGGGGAAGGCTGTCATCCGTGAGGACCAACCACAACACTCCACGTCAGTTGCTTCTTTATCTGTCCAATAATTACAAGACATGATCACGAATTCCATCAGGGCAAAATATGGTGGACCCACTCAAAGTTCCCTCTTGTATTCTAAACCTTATACAAAGAGGATTGACAATCTCAGACTGCCCACTGGGTATCAGCCTCCCAAGTTCCAACAGTTTGATGGAAAGGGCAACCCAAAGCAGCACATCGCCCACTTTGTCGAAACCTGTGAGAACGCCGGTACTCAGGGAGATTTGCTTGTTAGGCAATTTGTCCGAACACTGAAAGGAAACGCGTTCGATTGGTACACTGACCTGGAGCCTGATACAATTGACAGTTGGGAACAAATGGAGAGAGAGTTTCTGAATCGCTTCTACAGTACGAGGCGAACAGTTAGTATGACAGAACTCACGAGCACAAAGCAGCGAAAGGGTGAGCCAGTCATTGATTACATCAACCGTTGGAGAGCTTTGAGTCTCGACTGTAAAGATAGACTCTCTGAGTTGTCCTCTGTTGAGATGTGCACCCAAGGCATGCACTGGGGACTTCTTTATATCTTACAGGGGATAAAACCCCGAACCTTTGAAGAATTAGCGGCTCGCGCTCATGACATGGAGTTGAGCATCGCTTGTAGAGGGAATAAAGATCCCGTAGTCCCAGACATGAGGAAAGAAAAAAAGGAAGTCAAGGGCACTGAGAAAGTTACGAAGAGTGCCACGAAAGAATCCATGGTCGTCAACACGACCCCGTTGAAATTTTCCTCCAAAGGAAAAGAAAGTAAAACAAAAAAACGAGTGGAGACAGGCGAGAGACATCGCCTAACGTTAAAAGAAAGACAAGAAAAGGTATATCCATTTCCAGACTCCGACGTGCCAGATATGTTGGAACAGCTGCTGGAGAAGCAACTAATTGAACTTCCAGAATGCAAACGACCAGAAGAGTTAGGGAAAATCAATGATCCTAACTACTGCAGGTATCACCGAGTCGTTAGTCACCCGTTGGAGAAGTGTTTTGTATTAAAGGAGTTAATCCTTAAATTGGCTCGCGAGAAGAGAATTGAGTTAGACCTTGATGAGGTGGCTCAGGCGAATCATGCGACAATAATGGCAAATGTAGGGGATCAAATTCTCCCAATCTCTTCATGTGATTATGAAGAGAGATTGATTCAGTTCGGGACCCTTGATCCTGTAGTGGTTCGAATCCAAAAAGAAGCTACAATGAAAGGATCCCAAGAAAAATATGATTCCATCAAAGATGAGAGCGACGGTTGGACCCTTGTCGTGTGTCGCAAAAAGCAAAAGCAAAGTTACGCACGGAAAGAGTCCCACCTATATCGAGATAGTAAAAGAAAAGTTAAGTCTCAAAGGAAGAAAGAAAAAAAGAAGTCAAGGAGGTCAAAGCCTGTCGTGGAGGAAAGTGAAGATTTCTTTTGCCCTCCACAACCCATAACTTTGGCAGAATACTTCCCAAGGAGCTTTCTCGATGATAGTAAAGAGGAGGCACTTGAAACTGTCACGTGTTACGTTGTGGACGTGGTGGAAGATGATGACGTCCTCGCTAGCTCCTCGGGAGTGGCGGCAGGTTCAGGAGACTTATCCTCTTTCAACATAAAGGACTTACTGTCACTTCCTCAGGAAGCTAAAAACGTCCTTATTAACGATGGTACAAAGATCCCAACCTCCAAGGCACGCACATGTGCTTCGTGTTGCATGACTATAGGATTTTCCGATGAAGATTTGCTGCTAGGGTCAAAGCCTCACAATAGACCTTTATTCGTCTCGGGATACATCCGAGAACAGAGGGTAAGTCGGATCCTCATCGACGATGGATCAGCTGTCAATATAATGCCTAAGTCAACCATGAAGCAATTAGGCATCTCGATGGAAGAATTATCAAACAGTAAATTGGTGATTCAAGGTTTCAATCAAGGCGGACAACGAGCAATTGGCATGATACGCCTCGAGCTCATCATTGGGGATTTGAAGGTCGATACTTTGTTTCATGTGATAGATTCCAAGACCACTTATAAGTTGCTATTAGGTCGTCCTTGGATCCATGGCAATGGAGTGATAACTTCTACATTGCACCAGTGCTTCAAATTCTATCAAGATGGCATTAAGAAAGGTGAAGCTGACTCTAACCCATTTTCAGAAGCTGAATCCCATTTCGCTGATGTAAAGTTTTATATGAAGAGCGACAATACAGGGGAAACTATACCTACAGAAATCCCCTTGATAAAAAAGAATGATAAACTCGATTTAGAGCCACAAGCAGATGCAGGGAAGAAAGTTGTTGAGAATGTGAAGGCATCTAACCTGAAAATGGTGAAACATCTACAAGCCTTGAGAAATCTAAAGTTGTAGAGGATGAGAAGTGTTCACCTGTCCTACGATACATCCCTTTATCCCGGCATAAAAAGGGTGAATCACCTTTCACTGAATGTCCGAAAACCATAAAGGTCGGTGACGTTGAAATTCTGAAGGAAGGTTTCACTATGCCTCTTACAAAGATCACAGAGCAAGAGATTAAGAAACCCGAGGATGACCAGATAAAAGCGATTTTGCCTGAAAAACGAACTAAAGACGGGTTCGACCCCAAGGCATACAAACTTCTAGCGAACGCAGGTTATGACTTCATAACTCACACTGAGTTTAAAAGTCTAAGGGTTTTTTACGGAAGATCTGAGCTCTCTGCAACACAGAAGAAGCTTCTAAAGGAAGGCTATAGTCTGCCTACGACAAGAAAAGGACTTGGATATAAGTCGCCCGAACCAGTTCGCATAACAAGAAAAGGGAAGGCAAAAGTGGCAGACACAAATCATATAACAGTAGAGGAGGTTGATGATTCAAAAGAAAAAGAAGGTGTCGACCAACGAACTTATGTTTTTAGGCGCATCAGGCCACCAGTTGCTCATGCTTTAGTCTTTCAGAGATTAAGTGTCAATGAAACGGAAGAAGAGAGCACACAACCTATTAATAGCTCCACTCGACCTTTGGTTTTCCGAAGGATAAGTATGCCCCTTGGAGATGAAGAGAGTACATTTTCAACTTCGGATGTCACTCGACCTTCAACTTTTCAAAGGTTAAATATGCCCATTGCGAAAGAAGATGGTACATTTTCAACTCCGGATGTGACTCGACCATCAGTTTTTCAGAGGTTAAGTGTTACCACGAGAAGAGACAAAAAAGAGTAG

mRNA sequence

ATGGGCCCTACCCTCTTTATGGCACGAGAGGGATTTCTGTTTGTTGGTTGGACCACAAACAGGTTGTTCATTAGAGGAGCACTGGTACTTAAGGACCAAGAGCCAACTAATCTCATATCGTTGGAGCTTCTGATCTGGTTTTTTATCTCTGCACATACTCCTCTGGTTGTTGCAAGCAACATCTCAAAGCTGATTGAAGAATCCTCTAAGGATAAGGTTGCAGTCAAAGAAAACCCACTGTTCGAATATGTCGTTCCAACATCTAAGCAGCCAAAGGATACACTAAGTCCTGATGTGATGTCCGTCATGATGGCTGATGTAGATCAGGATGAAAGAATGGCAGAGATGGAAAGGAAACTCAATCTTTTAATGAAGGCATTCGGGACCCTTGATCCTGTAGTGGTTCGAATCCAAAAAGAAGCTACAATGAAAGGATCCCAAGAAAAATATGATTCCATCAAAGATGAGAGCGACGGTTGGACCCTTGTCGTGTGTCGCAAAAAGCAAAAGCAAAGTTACGCACGGAAAGAGTCCCACCTATATCGAGATAGTAAAAGAAAAGTTAAGTCTCAAAGGAAGAAAGAAAAAAAGAAGTCAAGGAGGTCAAAGCCTGTCGTGGAGGAAAGTGAAGATTTCTTTTGCCCTCCACAACCCATAACTTTGGCAGAATACTTCCCAAGGAGCTTTCTCGATGATAGTAAAGAGGAGGCACTTGAAACTGTCACGTGTTACGTTGTGGACGTGGTGGAAGATGATGACGTCCTCGCTAGCTCCTCGGGAGTGGCGGCAGAGGATGAGAAGTGTTCACCTGTCCTACGATACATCCCTTTATCCCGGCATAAAAAGGGTGAATCACCTTTCACTGAATGTCCGAAAACCATAAAGAAGAAGCTTCTAAAGGAAGGCTATAGTCTGCCTACGACAAGAAAAGGACTTGGATATAAGTCGCCCGAACCAGTTCGCATAACAAGAAAAGGGAAGGCAAAAGTGGCAGACACAAATCATATAACAGTAGAGGAGGTTGATGATTCAAAAGAAAAAGAAGGTGTCGACCAACGAACTTATGTTTTTAGGCGCATCAGGCCACCAGTTGCTCATGCTTTAGTCTTTCAGAGATTAAGTGTCAATGAAACGGAAGAAGAGAGCACACAACCTATTAATAGCTCCACTCGACCTTTGGTTTTCCGAAGGATAAGTATGCCCCTTGGAGATGAAGAGAGTACATTTTCAACTTCGGATGTCACTCGACCTTCAACTTTTCAAAGGTTAAATATGCCCATTGCGAAAGAAGATGGTACATTTTCAACTCCGGATGTGACTCGACCATCAGTTTTTCAGAGGTTAAGTGTTACCACGAGAAGAGACAAAAAAGAGTAG

Coding sequence (CDS)

ATGGGCCCTACCCTCTTTATGGCACGAGAGGGATTTCTGTTTGTTGGTTGGACCACAAACAGGTTGTTCATTAGAGGAGCACTGGTACTTAAGGACCAAGAGCCAACTAATCTCATATCGTTGGAGCTTCTGATCTGGTTTTTTATCTCTGCACATACTCCTCTGGTTGTTGCAAGCAACATCTCAAAGCTGATTGAAGAATCCTCTAAGGATAAGGTTGCAGTCAAAGAAAACCCACTGTTCGAATATGTCGTTCCAACATCTAAGCAGCCAAAGGATACACTAAGTCCTGATGTGATGTCCGTCATGATGGCTGATGTAGATCAGGATGAAAGAATGGCAGAGATGGAAAGGAAACTCAATCTTTTAATGAAGGCATTCGGGACCCTTGATCCTGTAGTGGTTCGAATCCAAAAAGAAGCTACAATGAAAGGATCCCAAGAAAAATATGATTCCATCAAAGATGAGAGCGACGGTTGGACCCTTGTCGTGTGTCGCAAAAAGCAAAAGCAAAGTTACGCACGGAAAGAGTCCCACCTATATCGAGATAGTAAAAGAAAAGTTAAGTCTCAAAGGAAGAAAGAAAAAAAGAAGTCAAGGAGGTCAAAGCCTGTCGTGGAGGAAAGTGAAGATTTCTTTTGCCCTCCACAACCCATAACTTTGGCAGAATACTTCCCAAGGAGCTTTCTCGATGATAGTAAAGAGGAGGCACTTGAAACTGTCACGTGTTACGTTGTGGACGTGGTGGAAGATGATGACGTCCTCGCTAGCTCCTCGGGAGTGGCGGCAGAGGATGAGAAGTGTTCACCTGTCCTACGATACATCCCTTTATCCCGGCATAAAAAGGGTGAATCACCTTTCACTGAATGTCCGAAAACCATAAAGAAGAAGCTTCTAAAGGAAGGCTATAGTCTGCCTACGACAAGAAAAGGACTTGGATATAAGTCGCCCGAACCAGTTCGCATAACAAGAAAAGGGAAGGCAAAAGTGGCAGACACAAATCATATAACAGTAGAGGAGGTTGATGATTCAAAAGAAAAAGAAGGTGTCGACCAACGAACTTATGTTTTTAGGCGCATCAGGCCACCAGTTGCTCATGCTTTAGTCTTTCAGAGATTAAGTGTCAATGAAACGGAAGAAGAGAGCACACAACCTATTAATAGCTCCACTCGACCTTTGGTTTTCCGAAGGATAAGTATGCCCCTTGGAGATGAAGAGAGTACATTTTCAACTTCGGATGTCACTCGACCTTCAACTTTTCAAAGGTTAAATATGCCCATTGCGAAAGAAGATGGTACATTTTCAACTCCGGATGTGACTCGACCATCAGTTTTTCAGAGGTTAAGTGTTACCACGAGAAGAGACAAAAAAGAGTAG

Protein sequence

MGPTLFMAREGFLFVGWTTNRLFIRGALVLKDQEPTNLISLELLIWFFISAHTPLVVASNISKLIEESSKDKVAVKENPLFEYVVPTSKQPKDTLSPDVMSVMMADVDQDERMAEMERKLNLLMKAFGTLDPVVVRIQKEATMKGSQEKYDSIKDESDGWTLVVCRKKQKQSYARKESHLYRDSKRKVKSQRKKEKKKSRRSKPVVEESEDFFCPPQPITLAEYFPRSFLDDSKEEALETVTCYVVDVVEDDDVLASSSGVAAEDEKCSPVLRYIPLSRHKKGESPFTECPKTIKKKLLKEGYSLPTTRKGLGYKSPEPVRITRKGKAKVADTNHITVEEVDDSKEKEGVDQRTYVFRRIRPPVAHALVFQRLSVNETEEESTQPINSSTRPLVFRRISMPLGDEESTFSTSDVTRPSTFQRLNMPIAKEDGTFSTPDVTRPSVFQRLSVTTRRDKKE

Homology

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BLAST of Spg037194 vs. NCBI nr
Match: KAA0055957.1 (uncharacterized protein E6C27_scaffold319G00830 [Cucumis melo var. makuwa])

HSP 1 Score: 160.6 bits (405), Expect = 3.2e-35
Identity = 96/230 (41.74%), Postives = 127/230 (55.22%), Query Frame = 0


Query: 257 SSSGVAAEDEKCS--PVLRYIPLSRHKKGESPFTECPKTIK------------------- 316
           ++  V   DEK S  P+LRY+PLSR KKGESPF E P+ +K                   
Sbjct: 210 TAKSVILMDEKTSNPPILRYVPLSRRKKGESPFVESPQGLKRRTKDGFDPKAYKLMAKAG 269

Query: 317 ------------------------KKLLKEGYSLPTTRKGLGYKSPEPVRITRKGKAKVA 376
                                   KKLL+EG+ +P +RKGLGYKSPEP+RITRKGK KV 
Sbjct: 270 YDFITHTEFKSLKIHEQPKLSSTQKKLLREGHVIPMSRKGLGYKSPEPIRITRKGKKKVV 329

Query: 377 DTNHITVEEVDDSKEKEGVDQRTYVFRRIRPPVAHALVFQRLSVNETEEESTQPINSSTR 436
           D NHITV+EVD  +EKEG +QRT  F RI P VA A VF+RLS+ E + +  Q  ++  R
Sbjct: 330 DNNHITVKEVDSMEEKEGDNQRTSTFDRISPHVARAPVFERLSMTEAKRKDHQSTSNLDR 389

Query: 437 PLVFRRISMPLGDEESTFSTSDVTRPSTFQRLNMPIAKEDGTFSTPDVTR 442
              F+R+++   +E+    TS  T+PS F+RL++   K   T   P + R
Sbjct: 390 RSAFQRLTITFKEEKGICQTSMTTKPSAFERLSITKKKNAQTPRAPIINR 439

[Close]

BLAST of Spg037194 vs. NCBI nr
Match: TYK28162.1 (uncharacterized protein E5676_scaffold289G00760 [Cucumis melo var. makuwa])

HSP 1 Score: 157.1 bits (396), Expect = 3.5e-34
Identity = 96/240 (40.00%), Postives = 128/240 (53.33%), Query Frame = 0


Query: 257 SSSGVAAEDEKCS--PVLRYIPLSRHKKGESPFTECPKTIK------------------- 316
           ++  V   DEK S  P+LRY+PLSR KKGESPF E P+ +K                   
Sbjct: 174 TAKSVILMDEKTSNPPILRYVPLSRRKKGESPFVESPQGLKIDLTEASLPQRRTKDGFDP 233

Query: 317 ----------------------------------KKLLKEGYSLPTTRKGLGYKSPEPVR 376
                                             KKLL+EG+ +P +RKGLGYKSPEP+R
Sbjct: 234 KAYKLMAKAGYDFTTHTDFKSLKIHEQPKLSSTQKKLLREGHVIPMSRKGLGYKSPEPIR 293

Query: 377 ITRKGKAKVADTNHITVEEVDDSKEKEGVDQRTYVFRRIRPPVAHALVFQRLSVNETEEE 436
           ITRKGK KV D+NHITV+EVD  +EKEG +QRT  F RI P VA A VF+RLS+ E E +
Sbjct: 294 ITRKGKEKVVDSNHITVKEVDSMEEKEGDNQRTSTFDRISPHVARAPVFERLSMTEAERK 353

Query: 437 STQPINSSTRPLVFRRISMPLGDEESTFSTSDVTRPSTFQRLNMPIAKEDGTFSTPDVTR 442
             Q  ++  +   F+R+++   +E+    TS  T+PS F+RL++   K   T   P + R
Sbjct: 354 DHQSTSNLDQRSAFQRLTITFKEEKGICQTSMTTKPSAFERLSITKKKNAQTPRAPIINR 413

[Close]

BLAST of Spg037194 vs. NCBI nr
Match: KAA0047672.1 (uncharacterized protein E6C27_scaffold115G001730 [Cucumis melo var. makuwa] >TYK08327.1 uncharacterized protein E5676_scaffold648G001250 [Cucumis melo var. makuwa])

HSP 1 Score: 152.9 bits (385), Expect = 6.6e-33
Identity = 90/198 (45.45%), Postives = 119/198 (60.10%), Query Frame = 0


Query: 264 EDEKCSPVLRYIPLSRHKKGESPFTECPKTIKK---KLLKEGYSL---PTTRKGLGYKSP 323
           E+    P+LRY+PLSR KKGESPF E P+ +K    ++LKE +++     T+KGLGYKSP
Sbjct: 720 ENTSNPPILRYVPLSRCKKGESPFVESPQGLKVGDIEVLKESFTIQLTKITKKGLGYKSP 779

Query: 324 EPVRITRKGKAKVADTNHITVEEVDDSKEKEGVDQRTYVFRRIRPPVAHALVFQRLSVNE 383
           EP+RITRKGK KV D+NHITV+EVD  + KEG  QRT  F RI P VA A VF+RLS+ E
Sbjct: 780 EPIRITRKGKEKVVDSNHITVKEVDSMEGKEGHSQRTSAFDRISPHVARAPVFERLSMTE 839

Query: 384 TEEESTQPINSSTRPLVFRRISMPLGDEESTFSTSDVTRPSTFQRLNMPIAKEDGTFSTP 443
            + +  Q                         STS++ R S FQRL +   +E G     
Sbjct: 840 AKRKDHQ-------------------------STSNLDRRSAFQRLTITFKEEKGICQAS 892

Query: 444 DVTRPSVFQRLSVTTRRD 456
             T+PS F+RLS+T +++
Sbjct: 900 MTTKPSAFERLSITKKKN 892

[Close]

BLAST of Spg037194 vs. NCBI nr
Match: XP_031735972.1 (uncharacterized protein LOC116401693 [Cucumis sativus])

HSP 1 Score: 152.5 bits (384), Expect = 8.7e-33
Identity = 98/249 (39.36%), Postives = 123/249 (49.40%), Query Frame = 0


Query: 256  ASSSGVAAEDEKC--SPVLRYIPLSRHKKGESPFTECPKTIK------------------ 315
            +S+ G+  +DE    +PVLRY+PLSR KKGESPF E PK +K                  
Sbjct: 937  SSTKGMILKDENAANTPVLRYVPLSRRKKGESPFMESPKGLKVGDIEIIKESFTTPLTKI 996

Query: 316  -----------------------------------------------------------K 375
                                                                       K
Sbjct: 997  AKQEVKVDLVEANLPQRRTKDGFDPKAYKLMAKAGYDFTAHTEFKSLEIHDRPELSSTQK 1056

Query: 376  KLLKEGYSLPTTRKGLGYKSPEPVRITRKGKAKVADTNHITVEEVDDSKEKEGVDQRTYV 426
            KLL+EG+S+P +RKGLGYKSPEP+RIT+KGK KV D NHIT+EE D++  KEG +QR  V
Sbjct: 1057 KLLREGHSIPVSRKGLGYKSPEPIRITKKGKEKVVDINHITIEEDDNTDVKEGDNQRISV 1116

[Close]

BLAST of Spg037194 vs. NCBI nr
Match: XP_031735972.1 (uncharacterized protein LOC116401693 [Cucumis sativus])

HSP 1 Score: 78.6 bits (192), Expect = 1.6e-10
Identity = 43/126 (34.13%), Postives = 80/126 (63.49%), Query Frame = 0


Query: 127 FGTLDPVVVRIQKEATMKGSQEKYDSIKDESDGWTLVVCRKKQKQSYARKESHLYRDSKR 186
           FGT +P+VV+  +E + +  Q +   I+++ +GW +V  RKK++    ++ES  Y++ +R
Sbjct: 543 FGTFEPIVVQFFQEISYEDPQGEKRPIEEDDEGWIVVTHRKKRQSIPTQRESRSYQNYRR 602

Query: 187 KVKSQRKKEKKKSRRSKPVVEESEDFFCPPQPITLAEYFPRSFLDDSKEEALETVTCYVV 246
             K+Q+ K+KKK+ + K V  E  +F  P + +TLA++ P+SFL D ++E  E V C+ +
Sbjct: 603 GNKTQKNKKKKKTHKLKLVHNEDMNFSRPQRLVTLADFLPKSFLCDHQDEDPEVVACHAI 662

Query: 247 DVVEDD 253
           +  E++
Sbjct: 663 NTTEEE 668

HSP 2 Score: 65.9 bits (159), Expect = 1.1e-06
Identity = 43/118 (36.44%), Postives = 65/118 (55.08%), Query Frame = 0


Query: 57  VASNISKLIEESSKDKVAVKENPLFEYVVPTSKQPKDTLSPDVMSVMMADVDQDERMAEM 116
           +A +I K + ES K  + +KENPL+      S +      PDVMSVMMADV  +  MAEM
Sbjct: 39  IAQSILKQLMESPKAGIVIKENPLYNDYDSASSRSLKEAHPDVMSVMMADVAVETAMAEM 98

Query: 117 ERKLNLLMKAFGTLDPVVVRIQKEATMKGSQEKYDS--IKDESDGWTLVVCRKKQKQS 173
           ERK+NLLMK     D  +  ++++   + + E   +  +K +  G  +V   + Q+QS
Sbjct: 99  ERKINLLMKVVDERDHEIAALKEQMQTRETAESSQTPVVKVDDKGKNVVQENQPQQQS 156

HSP 3 Score: 151.4 bits (381), Expect = 1.9e-32
Identity = 97/249 (38.96%), Postives = 123/249 (49.40%), Query Frame = 0


Query: 256 ASSSGVAAEDEKC--SPVLRYIPLSRHKKGESPFTECPKTIK------------------ 315
           +S+ G+  +DE    +PVLRY+PLSR KKGESPF E PK +K                  
Sbjct: 312 SSTKGMILKDENAANTPVLRYVPLSRRKKGESPFMESPKGLKVGDIEIIKESFTTPLTKI 371

Query: 316 -----------------------------------------------------------K 375
                                                                      K
Sbjct: 372 AKQEVKVDLVEANLPQRRTKDGFDPKAYKLMAKAGYDFTAHTEFKSLEIHDRPELSSTQK 431

Query: 376 KLLKEGYSLPTTRKGLGYKSPEPVRITRKGKAKVADTNHITVEEVDDSKEKEGVDQRTYV 426
           KLL+EG+S+P +RKGLGYKSPEP+RIT+KGK KV D NHIT+EE D++  KEG +QR  V
Sbjct: 432 KLLREGHSIPVSRKGLGYKSPEPIRITKKGKEKVVDINHITIEEDDNTDVKEGDNQRISV 491

[Close]

BLAST of Spg037194 vs. ExPASy TrEMBL
Match: A0A5A7UMY2 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G00830 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.5e-35
Identity = 96/230 (41.74%), Postives = 127/230 (55.22%), Query Frame = 0


Query: 257 SSSGVAAEDEKCS--PVLRYIPLSRHKKGESPFTECPKTIK------------------- 316
           ++  V   DEK S  P+LRY+PLSR KKGESPF E P+ +K                   
Sbjct: 210 TAKSVILMDEKTSNPPILRYVPLSRRKKGESPFVESPQGLKRRTKDGFDPKAYKLMAKAG 269

Query: 317 ------------------------KKLLKEGYSLPTTRKGLGYKSPEPVRITRKGKAKVA 376
                                   KKLL+EG+ +P +RKGLGYKSPEP+RITRKGK KV 
Sbjct: 270 YDFITHTEFKSLKIHEQPKLSSTQKKLLREGHVIPMSRKGLGYKSPEPIRITRKGKKKVV 329

Query: 377 DTNHITVEEVDDSKEKEGVDQRTYVFRRIRPPVAHALVFQRLSVNETEEESTQPINSSTR 436
           D NHITV+EVD  +EKEG +QRT  F RI P VA A VF+RLS+ E + +  Q  ++  R
Sbjct: 330 DNNHITVKEVDSMEEKEGDNQRTSTFDRISPHVARAPVFERLSMTEAKRKDHQSTSNLDR 389

Query: 437 PLVFRRISMPLGDEESTFSTSDVTRPSTFQRLNMPIAKEDGTFSTPDVTR 442
              F+R+++   +E+    TS  T+PS F+RL++   K   T   P + R
Sbjct: 390 RSAFQRLTITFKEEKGICQTSMTTKPSAFERLSITKKKNAQTPRAPIINR 439

[Close]

BLAST of Spg037194 vs. ExPASy TrEMBL
Match: A0A5D3DXC7 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00760 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.7e-34
Identity = 96/240 (40.00%), Postives = 128/240 (53.33%), Query Frame = 0


Query: 257 SSSGVAAEDEKCS--PVLRYIPLSRHKKGESPFTECPKTIK------------------- 316
           ++  V   DEK S  P+LRY+PLSR KKGESPF E P+ +K                   
Sbjct: 174 TAKSVILMDEKTSNPPILRYVPLSRRKKGESPFVESPQGLKIDLTEASLPQRRTKDGFDP 233

Query: 317 ----------------------------------KKLLKEGYSLPTTRKGLGYKSPEPVR 376
                                             KKLL+EG+ +P +RKGLGYKSPEP+R
Sbjct: 234 KAYKLMAKAGYDFTTHTDFKSLKIHEQPKLSSTQKKLLREGHVIPMSRKGLGYKSPEPIR 293

Query: 377 ITRKGKAKVADTNHITVEEVDDSKEKEGVDQRTYVFRRIRPPVAHALVFQRLSVNETEEE 436
           ITRKGK KV D+NHITV+EVD  +EKEG +QRT  F RI P VA A VF+RLS+ E E +
Sbjct: 294 ITRKGKEKVVDSNHITVKEVDSMEEKEGDNQRTSTFDRISPHVARAPVFERLSMTEAERK 353

Query: 437 STQPINSSTRPLVFRRISMPLGDEESTFSTSDVTRPSTFQRLNMPIAKEDGTFSTPDVTR 442
             Q  ++  +   F+R+++   +E+    TS  T+PS F+RL++   K   T   P + R
Sbjct: 354 DHQSTSNLDQRSAFQRLTITFKEEKGICQTSMTTKPSAFERLSITKKKNAQTPRAPIINR 413

[Close]

BLAST of Spg037194 vs. ExPASy TrEMBL
Match: A0A5D3C8N8 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001250 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.2e-33
Identity = 90/198 (45.45%), Postives = 119/198 (60.10%), Query Frame = 0


Query: 264 EDEKCSPVLRYIPLSRHKKGESPFTECPKTIKK---KLLKEGYSL---PTTRKGLGYKSP 323
           E+    P+LRY+PLSR KKGESPF E P+ +K    ++LKE +++     T+KGLGYKSP
Sbjct: 720 ENTSNPPILRYVPLSRCKKGESPFVESPQGLKVGDIEVLKESFTIQLTKITKKGLGYKSP 779

Query: 324 EPVRITRKGKAKVADTNHITVEEVDDSKEKEGVDQRTYVFRRIRPPVAHALVFQRLSVNE 383
           EP+RITRKGK KV D+NHITV+EVD  + KEG  QRT  F RI P VA A VF+RLS+ E
Sbjct: 780 EPIRITRKGKEKVVDSNHITVKEVDSMEGKEGHSQRTSAFDRISPHVARAPVFERLSMTE 839

Query: 384 TEEESTQPINSSTRPLVFRRISMPLGDEESTFSTSDVTRPSTFQRLNMPIAKEDGTFSTP 443
            + +  Q                         STS++ R S FQRL +   +E G     
Sbjct: 840 AKRKDHQ-------------------------STSNLDRRSAFQRLTITFKEEKGICQAS 892

Query: 444 DVTRPSVFQRLSVTTRRD 456
             T+PS F+RLS+T +++
Sbjct: 900 MTTKPSAFERLSITKKKN 892

[Close]

BLAST of Spg037194 vs. ExPASy TrEMBL
Match: A0A5A7TPR5 (RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1639G00040 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 4.6e-32
Identity = 87/192 (45.31%), Postives = 114/192 (59.38%), Query Frame = 0


Query: 265 DEKCSP--VLRYIPLSRHKKGESPFTECPKTIK-------------KKLLKEGYSLPTTR 324
           DEK S   +LRY+PLSR +KGESPF + P+ +K             KKLL+EG+ +P +R
Sbjct: 86  DEKTSNPLILRYVPLSRRQKGESPFVKFPQGLKVGDMKQPKLSLIQKKLLREGHVIPVSR 145

Query: 325 KGLGYKSPEPVRITRKGKAKVADTNHITVEEVDDSKEKEGVDQRTYVFRRIRPPVAHALV 384
           KG GYKSPEP+ I RK K KV D+NHITV EVD  +EKEG  QR   F +IRP V    V
Sbjct: 146 KGPGYKSPEPIHIIRKRKKKVIDSNHITVGEVDSMEEKEGGSQRISAFDQIRPHVVRTTV 205

Query: 385 FQRLSVNETEEESTQPINSSTRPLVFRRISMPLGDEESTFSTSDVTRPSTFQRLNMPIAK 442
           F+RLSV +TE +  Q  +S  +    +R++M    E+ T      TRPS F+RL++   K
Sbjct: 206 FERLSVTKTERKCHQSTSSLNKRSALQRLTMTFKKEKCTCQALRATRPSAFERLSVAKQK 265

[Close]

BLAST of Spg037194 vs. ExPASy TrEMBL
Match: A0A5A7TJZ7 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G003220 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 5.1e-31
Identity = 100/263 (38.02%), Postives = 124/263 (47.15%), Query Frame = 0


Query: 265 DEKCS--PVLRYIPLSRHKKGESPFTECPKTIK--------------------------- 324
           DEK S  P+LRY+PLSR KKGESPF + P+ +K                           
Sbjct: 737 DEKTSNPPILRYVPLSRCKKGESPFVKSPQGLKVGDIEVLKESFTTPFTKITKQEIKIDL 796

Query: 325 --------------------------------------------------KKLLKEGYSL 384
                                                             KKLL+EG+++
Sbjct: 797 TEASLPQSWTKDGFDPKAYKLMAKVGYDFTTHIEFKSLKIHEQPKLSSTQKKLLREGHAI 856

Query: 385 PTTRKGLGYKSPEPVRITRKGKAKVADTNHITVEEVDDSKEKEGVDQRTYVFRRIRPPVA 444
           P +RKGLGYKSPEP+RITRKGK KV D NHITV+EVD  KEKEG  QRT  F RI P VA
Sbjct: 857 PMSRKGLGYKSPEPIRITRKGKEKVVDNNHITVKEVDSMKEKEGDGQRTSAFDRISPHVA 916

Query: 445 HALVFQRLSVNETEEESTQPINSSTRPLVFRRISMPLGDEESTFSTSDVTRPSTFQRLNM 449
              VF+RLS+ E E +  Q  ++  R   F+R++M    E+        TRPS F+RL+M
Sbjct: 917 RTPVFERLSMTEVERKDHQSTSNLDRRSAFQRLTMTSKKEKGICQAWMTTRPSAFERLSM 976

The following BLAST results are available for this feature:

BLAST of Spg037194 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0055957.1	3.2e-35	41.74	uncharacterized protein E6C27_scaffold319G00830 [Cucumis melo var. makuwa]	[more]
TYK28162.1	3.5e-34	40.00	uncharacterized protein E5676_scaffold289G00760 [Cucumis melo var. makuwa]	[more]
KAA0047672.1	6.6e-33	45.45	uncharacterized protein E6C27_scaffold115G001730 [Cucumis melo var. makuwa] >TYK...	[more]
XP_031735972.1	8.7e-33	39.36	uncharacterized protein LOC116401693 [Cucumis sativus]	[more]
XP_031735972.1	1.6e-10	34.13	uncharacterized protein LOC116401693 [Cucumis sativus]	[more]

BLAST of Spg037194 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg037194 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UMY2	1.5e-35	41.74	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5D3DXC7	1.7e-34	40.00	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5D3C8N8	3.2e-33	45.45	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G00125...	[more]
A0A5A7TPR5	4.6e-32	45.31	RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7TJZ7	5.1e-31	38.02	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]

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BLAST of Spg037194 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg037194.1	Spg037194.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process