Spg037176 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGTTGAAGAAGATAGGAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGAGTTCAACCTGTCAACCTCTGGTTTTTGATTCGGTTTGAGCTACACAGAAGGAACTAAGAGGTGAGGTTTGATTTTCTTGAAAGTTAGTTCATTTTCTAGCAAATTTCATGAAGGAAGCTTGAGCTAAATCGTATGAGAAGTTAATAGTTTTTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAACCAGGAGGATCTCTGGTGTTCTCTAGTCTTTTGAGCATTCTGGGGTGTACAAGTCGAATCAGAAGCTCTATTTGGTATTGTTGCAAATCTTATTCAATTTCCTACAACGTTCATGAAGATTGTGTGAGCCACAAATGACTTTAAGTAGGGTTAATTTCAGGAGTTAGATAAAGGGTAGCAGAGAACCTCGAATCTGTGTTGTTTGTGTTCGGGGCAATTCTGGGCACATCGGTTGGGAATCTCATTTTCATTTCTTCAGGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTTTGATGTGTATTGCATTAATTTTGGTTCAGTATTGAGAAAGTTATGGGTGTTGGAAGTTAGGGTATAGAATCTGGAAAATTTGGAAAAGTAGAATGTGAATGTGATTCTTAATCCAATTGTTTAAAAATTCATGAGCATGGAAAGACAAAGCTATCTATGGTTCTAATGCTCGGTTTTGGTTATTTGACAGGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGAGAACTAGATAAGACTGTGAGTGACAAAATGAATTTCGAAAATGGTTTCCAACGGTTGTTCATGTTTAGATGTTTACATGCTTTTCTATGAATGATACATGGTTTTTATGAACAGTTTCAAGCATAAGTTTTGAGCTCAGATTTTCTAACGAGGTTTATATACGAGCACGTGGCTAATGACTTTATGAAAAGTAGCTGAAACGATATCTTTTAAAGTAAAGAATGGATTAGCAAGTACTTTTAAACGATTTCCAGTTTTTCACGAGCAAGCTGAGTAAGCTTAAGTTTTACGAAAGATAACGATGAGCAGGCATGTTTTAATGTTTTCATGTGATTTTCTGAGATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTCGACGTTGAGTGTACTCCGTGACAACGATGCTATCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGTAGTGCTGGGAGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTTAAAACGTTTGATGTACTTAATATGCCTTGCTAGATTTTTAATGACGAACTTGCGAGATATTTTAGAAAGCCTTTTTCATTACACGTTTATGTTAAACGCTTGAATTGAGCATATTTATACGTTTAAAGGTTTATCATGTGTTTTGACTTCCGGATTTAGAGTTTTAAAGTTAGTCACTCACTGGGCTCCATAGCTCATTCTTTCAAAATGTTTTTCCACTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCACAACAAGTTCCAATACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTAAGGATTGGATAATATAGTCCTAGAGGTCGTGGTTGTATAAACCCTAGTTGTATATGTTTTTGGTTGTGACATCTATATCAGGTTATTATCCGAACCAAGTTATGTCAGGGCGGCACCTCGTGTTTGTTGGAAGTTTTTTTTCAGGGATTCCGCTGTGTTCTGTTTCATGTAGGATGCTTTATATCTATGACTAGTATGTTTATCAGGTTCAACGTTCAGGAGGGTCAGCGGGTATCGTCAGAGGAGGACAATGTCCGTTGGCTTCACGCCATCTTCCGGACTAAGCTAGCAGGTGGTCCGGGAGGGGGTGTGACAGTTTGCATGGATCAATAA ATGAGGTTGAAGAAGATAGGAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGATTTTTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAACCAGGAGGATCTCTGGTGTTCTCTAGTCTTTTGAGCATTCTGGGGTGTACAAGTCGAATCAGAAGCTCTATTTGGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGAGAACTAGATAAGACTCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTCGACGTTGAGTGTACTCCGTGACAACGATGCTATCGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCACAACAAGTTCCAATACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTTCAACGTTCAGGAGGGTCAGCGGGTATCGTCAGAGGAGGACAATGTCCGTTGGCTTCACGCCATCTTCCGGACTAAGCTAGCAGGTGGTCCGGGAGGGGGTGTGACAGTTTGCATGGATCAATAA ATGAGGTTGAAGAAGATAGGAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGATTTTTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAACCAGGAGGATCTCTGGTGTTCTCTAGTCTTTTGAGCATTCTGGGGTGTACAAGTCGAATCAGAAGCTCTATTTGGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGAGAACTAGATAAGACTCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTCGACGTTGAGTGTACTCCGTGACAACGATGCTATCGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCACAACAAGTTCCAATACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTTCAACGTTCAGGAGGGTCAGCGGGTATCGTCAGAGGAGGACAATGTCCGTTGGCTTCACGCCATCTTCCGGACTAAGCTAGCAGGTGGTCCGGGAGGGGGTGTGACAGTTTGCATGGATCAATAA MRLKKIGKAHAKPAIAESDFWNGKQSTGFSSKPGGSLVFSSLLSILGCTSRIRSSIWPRGNRSSLQTGELDKTPEAIWYRVHTGYIPLSTLSVLRDNDAIVEIELPVPDTLPTSAESSTTSSNTWVELYIESVHIVNVLFNVQEGQRVSSEEDNVRWLHAIFRTKLAGGPGGGVTVCMDQ Homology
BLAST of Spg037176 vs. NCBI nr
Match: TYK25935.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 158.3 bits (399), Expect = 6.2e-35 Identity = 92/166 (55.42%), Postives = 106/166 (63.86%), Query Frame = 0
BLAST of Spg037176 vs. NCBI nr
Match: KAA0040194.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 158.3 bits (399), Expect = 6.2e-35 Identity = 92/166 (55.42%), Postives = 106/166 (63.86%), Query Frame = 0
BLAST of Spg037176 vs. NCBI nr
Match: TYK11835.1 (uncharacterized protein E5676_scaffold152G00520 [Cucumis melo var. makuwa]) HSP 1 Score: 152.1 bits (383), Expect = 4.4e-33 Identity = 91/168 (54.17%), Postives = 109/168 (64.88%), Query Frame = 0
BLAST of Spg037176 vs. NCBI nr
Match: KAA0062409.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 149.8 bits (377), Expect = 2.2e-32 Identity = 93/179 (51.96%), Postives = 108/179 (60.34%), Query Frame = 0
BLAST of Spg037176 vs. NCBI nr
Match: TYK26572.1 (putative Retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 149.8 bits (377), Expect = 2.2e-32 Identity = 93/179 (51.96%), Postives = 108/179 (60.34%), Query Frame = 0
BLAST of Spg037176 vs. ExPASy TrEMBL
Match: A0A5A7T9P7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1164G00060 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 3.0e-35 Identity = 92/166 (55.42%), Postives = 106/166 (63.86%), Query Frame = 0
BLAST of Spg037176 vs. ExPASy TrEMBL
Match: A0A5D3DR18 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold190G00320 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 3.0e-35 Identity = 92/166 (55.42%), Postives = 106/166 (63.86%), Query Frame = 0
BLAST of Spg037176 vs. ExPASy TrEMBL
Match: A0A5D3CJX3 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00520 PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 2.2e-33 Identity = 91/168 (54.17%), Postives = 109/168 (64.88%), Query Frame = 0
BLAST of Spg037176 vs. ExPASy TrEMBL
Match: A0A5A7V9N3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G002110 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 1.1e-32 Identity = 93/179 (51.96%), Postives = 108/179 (60.34%), Query Frame = 0
BLAST of Spg037176 vs. ExPASy TrEMBL
Match: A0A5D3DSY7 (Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001810 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 1.1e-32 Identity = 93/179 (51.96%), Postives = 108/179 (60.34%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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