Spg037174 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg037174
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCCHC-type domain-containing protein
Locationscaffold5: 24038777 .. 24048808 (+)
RNA-Seq ExpressionSpg037174
SyntenySpg037174
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GATTGTCCTTTGATTTGCATGGGTGAGAGTGGCCAATACGTCGACTCAATAAGCCTACCATTTTGGGGACAAGACCGAATGGGGAGCTGGGAACATAATCGTACAAGATGGAATTCACTCCTTCCCGACTTTAGGGAAGCAGGTGAGTGTTCCCTTAAGTGGTTACTCCGAGTCTTGAACAAAGGCCCCTACCCTCTCAATGGCACGAGAGGGTTTTCAGTTTGATGGTTGGACCACAAACAGGTTGTTCATTAGAGGAGAACTGGTACTTAAGGAAATAGAAGTAACCCAGGGGTAAAACGGTAATTTGACCCAGCTGGTGTTACGGACACTCGTGAAGGACTAACTAGTCGATATTGGCCTATGTCCGTGGACACAGAAAATATGTCTGCAGTGAGAAGAGTACAACTGTGAGTCTATAGTGGAATGTACACACAGTTAACGAATATTGATTAATTTGGTTAATGAGTTTGACCAATTAATCTCATATCGTTGGAGCTTCTGATCTGCAGGTCCATTAGGTCCCACTGGTAGCTCATAAAGTAATTTGAGGCAACTAAGTAATAAATGTAAATTGAAAATGTTCAATTTACCAAGGGAAACAAATATAATATATATTGATATATTATTATGAGAGAAATTAATATTTGAAGAAATTCAAATATTAATATAAATTTATGGAAGTTTGAAAGAGTTCAAATAATGAATTAATTAATTTAAGGCCTAAAATCTATTTGGGCAAATTAATTAATTCAAGGCCGGAAATTAAATATGTGATATTTAATTGGTGGTTAATTAATTAAAGAATTCATTAACCGGGAATTAATCAATTATGGAAATAATTAATCACTTAAGGAAGTGATTAATCATTTATGGAAATGATCTAATCACTTATGGAAGTAATTAGTCATTTGTGGAAAAGATTAATCAATTGTGGAATTGATTGATCATGGATTGATTAAATAAGGAATAAGATTGAATCAATTATGGAAAAGATTGATTTAATTGAATATTTTATTCATGGCCTCTCTTCTCTAAATAGAACACTAGACCTAATTGGTCAAGGATACTCTCCTCTTGCTCTTAGAATCACAAGACAAGACCTAGAATTCTCTCTAGCCTCCCTCTTAGAGAAAGACTCCCACAAGTCTTTTGCCTCCTAGACTTAGAGACATACCGGTGTAACCTCTGTGGTTATTGTGTCAATCAAGAAGAAATTTCCAGCGATTATAAGACAAGGAGGCCGCTGCGTTTTCGATCGTTGGAGCGTCGTTGGCGAAGAACGGTCAAGTCCACAACGAAGGTTTGTAACGGTTCTTGCCCTTTTCTTTAGAAAAGCATGAAAATAAATTTAGATTTATTTTTCAGCATGTTTAAACCAATTTTCCAGCAACTTTAAAGTGTGTTTAAAGTGTATTTGAGTTTTTCATAACGGTATTTTAATGTTAATTAATATACGGCGTAAGGTCCTTTCGATGCGCTTCCGCTGCGTGGGGACTTTTATTCCCTTTAGAAAGTTTGCAGTGCTAGAAGTAGGAATAAAGCTTTAATCTTCCTGTTGGAGATCGGCTAAGTCTTTTTTTTCATTGCCTAAATAAGTATTTTAAAAAAAAAAGAGAGAAAGATAAAAAAGGAGAAAAAAGACATATTTGAGCTGTGAACTTTTTGATTTGTTTGTTTATGTTTCAGGAAGTTAATAAAGTTAGGAGACAAGAAGAAGAGAACATGAGACAGGAAGATCCAGAAAAAGGAGTAGAACAATAACCATTAGACCTATGCTCGAGTGAGGGATGGGGCTATCAAACGTATGTTCCTTGCCAGCTCATCTGATGAAGCTTCAATTGTCCCTCCATTTCCATCATCTGTTCTGTATGAACTTGGGACCTCTAACTTGGATGACAGATCTTCCAAGAACTAGGGGAGTTTTCACTCTCTTTTACTTCTTATTGTTTCCTTCTATACATCAACATGTTTCTTTGTTTTTCATTTGCTTAGTTAGATCTCTTAGCAATTTGTTTCATGCATTAATTCATTGTTCTTTTAGTTAGGTTTAACATTGTTAGTTTTTAGCATATTGTTTTCAGTATATTACTTTGCTAGTCTGTTAGGTTAGTTTGTTGATGCTCAAGTCTGAAGGTCTTCATATAACACATGCGGAAGCAATTTTAGGACCGGAGGCACTTAACTACATCAATTTTAGAAAATGAAAACATGTTGTCCAAATACCGTAAACAGCGAGCAGAATTTGTACCAACCTTTTTGTAGACTGATTCAACAACTCCCTTTGATTCCTTTGATCACGAACGGTGTGTGGACCTCCTCTAGTGTCTTCCCTACTATTCTCTGGGCCAAGAACGACTTATGGGAGTCTATAGAGATAGACAATGGAAAGGGAATGCTTGAAGGTTCAAGCACTAGAGAGATATATGGAGATGAGTGAGTTTGAGACCAAAATCCAGCAGCATAACAATATGGAAATGGCTCTCTTCACTCTTAATCTGATTTTGCATCTACTTATAGAGATATTCCATGCAAGGAAACCCCTCAAGATCCAAGACACATGGTGGTAATGCAAGCCAAAGTGGATTCTAGGTGTTGAAGTCACAACACATGCAACAAGTGCATAGATGTGTTGTGTTGTATTCCATTATTTTATATCAACATGCAAGAGTGGAAATCCATCTAAATCCACTAAGTTTGATCCTCAATCAGATTTTGCTTGCATTCTAATTCGAATTCCAATTCCAAATTGAAATTGATTTCATGGCAATTAATTAGAAACATTTCCAATTAATTTGTTATGATTAATCCAATTAATCATTGACACCTTGTGCAATCTAATTATATATTATTCCTAATTCATATATAGTATTTAAAACACTTTTAAATACATAATCTCTCATTTTCCAATTTAATTCAAAATTAAATATCGTGTCAAACACAATTTACGAAAATGCCCTTTTTCCCGATTTTGAACAATTCAAAGAATCCTATCTTATTGTTCAAGGATTTATTCCGATATGAGCTAGTAGGGGGACCTAATGGACCTATAGATCATGGGCTCCAACGATTCGAGACTAACCGACTAATCTCATTAACCAAGCTTAACCAACATTCGTTAACTACCGGGACACTCCACTATAGCCCGATAGTTGCACTCCCTTCACTATAGATATATTTTCGTCCACTTGATTTAACCAGGTTCAGTAAGTCGATCCTTCACAGGTTGTCCGTAGCTATAACTAGGTTAAATGACCGTTTTACCCCTATAGTACTTCTAGTTCCTTAAGTCCCACTAATCCTCTAATGAACAATTGGTTTATGGTCCAACCAATAAACCGAGTCCCTCTCGGGCCAATGAGAGGGCGAGATCCCTTTGTTCAAGCCCCAGAGTCAGCACTTAAGGGAACAACCTCTCTACTATCCCTAATTTGGGTAGGAGTGAATTCCTTATCGCACGACTATGTCCCCAGCTATCTACCCGTTCCTATCCCTGAAATGGGAGGCTTATTGAGTCGATAATACTAAGCCACTCTCACCTATGCAGATCTAAGGATAAGCCAGAATAAACAGGAGTTCATAGTTAGCTCAGGATTAAGATCGAGTTACCTAGGTCATCACATGAAATAGTCAGTCTCGTCAGTAAAAGATGTTATAAAGCGAGAGCGACTTATTTCTCGGTCCTGGTCTTATGCAAACTCATTGCATAGGATGCCCCCACTCGCATGTCTCTACATGGTCGATTTAGGATCACATCGTCTATACTATCTATAAAGTGGGCCGCGTCTCAAAGTGTCCCCAGAATAAGGTACCCAGCCCTATCCCTATACTATAGATCGTTTTGGCTATTACTCGAGCTTGATCCACTTTTATGTCTCTACATAAAGCTCAAGTGTTCATCCTATAGCCATGGATCTTAGTTTATTGGATTGGGGTTATCTAATGTGCAATTTACTTATTCAGTAATGACTTTACTGAATTAATCTCGATAACGACTTTATCGAACAAGTATATAATATTCACTATCTACGAGTTTTAGGACACCAATCCCAACAATCTCCCACTTGAACTACAACTCTAGTTCAGTGGGATGTACTATAATCCATAACAGTAGTGGGTGTATAAAGTACGTGTATATTACTTAAAACGTATTACAATGTACAAATACAATAAACCAGGGCATCAGATACCGGTTACAATTCTCCGACTTGCCCTAGATTATTTTTCCATACATATCTCGCAAACCTAGACCTTCTAGATGACTCTCGATCACTTTAGCCATGAGAGCCTTCGTGAATGGACCAGCTATGTTGTGCTCCGACGCTATCTTTGTGACGATCACGTCTCCTCGGTGCACAATCTCTCTAATGAGATGATATTTCCTTTCGATGTGCTTGCCCCTCTTATGGCTGCAAGGTTCCTTTGAGTTTGCAACTGTGCCGCTATTATCATAGTATAAGGTGATAGGCAGATGCATATTCGGAATGACTTCCAAGTCAGTCAGGAACTTCCTGAGCCATACTGTCTCTTTTGCTGGTTCGCAAGCGGCTACATATTCGGCCTCCATGGTCGAGTCTGCAATGCATCCTTGCTTGATGCTACGCCATACTATTGCTCCTCCATTCAGAGTGAATACTGACCCCGATGTAGATTTCCTCGAATCTTTATCGGTTTGAAAGTCAGAATCAGTGTATCCAGTAAGGATCAAATCCTTGGAACCATACACGAGCACATAGTCCCTTGTTCTCCTTAGATACTTGAGGATATTTTTAACGGCTGTCCAGTGATCGAATCCTGGTTTTGATTGATATCTACTGACAATCCCTACTGCATAACAAATGTCAGGCCTTGTACACAACATGACATACATTAGACTGCCTACTGCAGAGGCATATGGAATTCGTCTCATGTCCTCAACTTCTTGAGGTGTTTGAGGACACTGTTCCTTAGACAAATTAATTCCGTGCCTGAAAGGTAATAGTCCCTTCTTGGAATTTTTCATTTATATCTAACCAACAATTGTCAATATAAGACACTTGAGACTGGACTAGCGTTTTGTTCTTTCGGTCTCGAACAATTTGGATCCCTAGAACATATTGCGCCTCACCCAAATCTTTCATTTGGAATTGAGTTGCTAGCCATAGTTTAATGTCAGTGAGATAACCTACATCATTCCCGATGAGTAGGATATCATCCACATACAGTACTAAGAAAGCTACGGAGTTATTGATTATCCTTTTGTAAACACAAGGCCCATCAACATTTTAATCAAATCCATAAGATTTGATTGCAGTATAAAATCTCATGTTCCACGATCTAGATGCTTTTTTAAACCCATAAATGGATCGTTTAAGCTTGCAAACTTTTTGCTCTTGATCCTGAGCTAGAACCCCTCTGGCTGAGACATGTAGATACTTTCTTCAAGATTGCCATTCAGAAAGGCAGTCTTGACATCCATTTGCCATATTTCATAATCATAAAACGTGCCAATGGATAAAAGTATCCGGATCGACTTCAACATGTCAACAGGGGAGAAGGTTTCCTCATAGTGAATCCTCTTCCGCTGGGTAAAACCCTTTGCTACAAGTTGCCTTAAAGGTCTGTACCTTTCCAGCAGCGTCTCGTTTTCTCTTGTAGATCCATTTACACCCTATGGGTCTAACCCCATCAGGTTGATCTACAAGATCCCATGCTGAATTAAAATGCATGGACTCGATTTCTAAGTCTATGGCTTTAATCCACTCGTTCTTGGCAACATCATCCATTGCTTGTTTAAAGGTTAATGGATCCTCGATCCTGTCATCAAGTATGACGACGGGAGTTTCAGTTAAACCCAAATAGCGATCAGGCTGTCTAACAACCCTCCCACTACGTCGAGGTTCTCTTATTTCTTGAAAAGGATGTGATTGACTCGAGCTGCCAGCATCATCAACAACTCTTGTTGATGTATCTGTAGCTTCGTTAGAAAGTTCACTTAAAATGACTTCGTGTCTTGTGGTCTCTAAGGTGGTCTTCTTCTAGGAATGTAGCATTTGTCGATACAAGTACTTTATTTTCCTCTAGATCGAAGAAGTATCCACCTCTCGTTTCTTTGGGATAGTCTACAAATAGGCAAAATCTAGAACGAGGCTCCAATTTCTTTGGGTTTGCTTCTAGCATGTATGCCAGACATCCCCAAATTCTAAAATGTCGTAAACTAGCTTTACGTCCTTTCCAGAGATCAAACGGTGTTTCTAAAACACTCTTTGAGGGAACTACGTTCAGAATATAAACTGCAGTCTCTACTACATAACCCTAAAACAAGTTAGGCAACTGAGCATAACTCATCATCGAACGAACCATGTCCAATAAGGTTCCGTTTCTCCTTTCCGATATACCATTTTGTTGAGGTGTACCAGGGGCTGAGAGTTGGGACGTAATTCCATGCTCTATCAAATAGTCTTGAAAACTCGAGTCCATATACTCTCCACCTCGATCGGATCGAGTCCATATACTCTCCAACTCAAGAGGTGAAGTTTGATTTTCTTGGAAGTTAGTTCATTTTCTAACAAATTTTATGAAGGAAGCTTGACCTAAATCGTATGAGAAGTGGATGGTTTTTGGAATGGAAAACAGGGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTGTCTCTGATGTTTTGAGCATTCTTGGGTGTACAAGTTGAATCAGAAGCTCTATTTGGTATGGTTGGAAAGCTTATTCGATTATCTACAAATTTTATGAAGAATTCGTGAGCCAAAAATGACTTTAAGTAGGTTTAATTTCAGGAGGAAGATAAAGGGTAACAGAGAAGCTCGAATCTGTGTTGTCTGACTTCGGGGCATTTCTGGACAAATTGGTTGGGAATCTCGTTTTCATTTCTTCAGGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTTTTATGTGTATTTTATTAATTTTGGTTCCGTATTGAGGAAGTTATGGGTATTGGAAGTTAGGGTATAGAATCTGGAAAATCTGGAGAGTAGAGTGTGAATGTGATTCTTAATCCAATTGTTTAAAAATTCATGAGCATGGAAAGACAAAGCTATCTATGGTTCTAATGCTCGGTTTTGGTTATTTGACAGGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACTGTGAGTGACAAAATGAATTTCGAAAATGTTCTTAAACGGTTGTTCATGATTATATGTTTTATATGCTTTACCATGAATGATATATGATTTTTATGAACGGTTTCAAGCATGAGTTTTGAGCTCAGATTTTCTAATGAGGTTTATATACGAGCACGTGTCTAATGACTTTAAGAAAAGTAGCTGAAACGATATCTTTTAAAGCAAAGTATGGATTAGCAAGTACTTTTAAACGATTTCCAGTTTTTCACGACCAAGCTGAGTAAGCTTAAGTTTTTCGAAAGATAGCGATAAGCAGGCATGTTTTAATGTTTCCATGTGATTTTCTGAGATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTTAAAACGTTTGATGTACTTGACATGCCTTGCTAGATTTTTAATGACGAACTTGCGAGATATTTTAGAAAGTTTTTTTCATTACACGTTTATGTTAAACGCTTTGATTGAGCATATTTATACGTTTGAAGGTTTATCACGTGTTCGACTTCCGGATTTAGAGTTTTAAAGTTAGTCACTCACTGGGCTTCGTAGCTCATCCTTTCAAAATGTTTTTCCACTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAGAGTTCTAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTCCGTTCATATTGTAAATGTTTTGTATGGGTTGTATAATATCGTCCTAGAGGTCATGGATGTATAACCCTAGTTGTATATGTTTTGGTCGTGATATCTATATTAGGTTACTTTCCAAACCAGGTTATGTCAGGGCTGCACCATGTGTATGTTGAAAGGTTTCCGTGGATTCCGCTGTGTGGTGTTTCATATAGAATGTTTTATATCTATGATTAGTATGTTTATCAGGTTCAACGTTTCAGTAGGGTCATCAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGCTAGCAGGTGGTCCAGGAGGGGGTGTGACAACGGTGCTGTCATAGATGAAAGTAGTCAAGTCAGTTTTATTATGTCTCTCCCGAAGAGTTTCATACAATTCCATACCAATTTAGTTATGAACAAAAGTGAGTACAATTTGACGACTCTCCTGAACGAGCTTCAGACCTACTAGTCTCCTACTAAAAGTAAAGGACTAGAAAATGAAGCAAATGTTGTTTCTGGTAGAAAGTTCCTAAGAGATTCAAACTCTAGGAACAAGTCTGAGTCTTTGACGGGACCGCCAGTAGAGTGTCAGATTCTCCCTAAGTCGTCAAATAAAATTTATAATCCACGACACTACTACTATTTTTGTAGCAATAGCGGTCGGGGTCGAACACAGGGAAGGGGGAACTAGTAAGTGTAAAATTTCGTGCTTATGAAAATAGAGGGGATTTTTTTATGATGAAAGACAACCAAGGAAAATTAAATAAAATAAATAATTGAAAGCTGAAATTTAAAAGACGGGAAATAAATAAGCATAAGAGAAATTAAACGAGATCAATAACATAAAAAAATGATCGTTGGATTGGGATTTATTATGCTTGATTCTAATTCATTAGCTTCCTAGTTTTCTCTAATAATCGTTCTAAACTGATTTCGTTAGTCCGGTGGGCTTCTGGGTTACTTGGAGGACCCCTCTACACTAACCTGTGCTAATTAACTCGCTAATCATGAATTCAACAATTAACAAGATTAATTAATATAAACTCTATCACTCGCCACCCCTTATGCATAATGAAGCAACCATCCGAGACCTTTGCAATGGTTACTACTTATATCTAACTAGTTTATTAACAAGCAATTTGCAACCACCTATTAAAACTAGCCGCTTTGGGATCGTGGGTCCGAAATCATAAGAACTAAATTTAAATACAATTTAAATATAATTCCTACAACCTTTAACATGCTCCTAGGCCTGTCAAGGGTCGTCTCGCGTAGAGAGTGGCTTGCCTCAACCTAGTGGCTATCTAAAAATAACTGATAGAATACACAAGCGGTAATCGCATAGGGCATCAATCCTAATTGACTAGCCCCATGTATTGGTTTAAACAAGATTACATGCAAAACTCAATGAAAATACATCAAGAACAGAAAGTATAAACAAGAAAACTCAGCCAATATTACTTAGAATCAAGACATAAATCCAATCCAACGATCAAAACGAGTTTAGCTACGCATATATGAAGTAAAAGCAACAGATAACATAAAAGAATCCATAGAATATGACTAACAATGGTCTACAAGAGTGCTGGAAGGTAAAAGAGGAAAAGAAATCGTAAAAGGGACAAAAATTCTAACCTAACGGCAGACTAAACCGAGACTACATATACATGGAAAACACGCTGGCGTCGAGTCGCCAAGGCGCAGCGTCGAGACGCTGCGAACATTCTTCTTCGATCCGAATTCGCGTCGGCGTCGAGACGCTGGCTTCATGACTCGACTTCCTGCTCTATTTCTCGGCTTTGTCTCGCTTCTTCTCTCTTCAGGGCTTCAATCTTTGGCTTTTGGTGTCACAATTCAGGCCCGCTTCAGCACAATTGGGTCTTTTCACCTCCTCGCCGTCCAAGACATTGAGATGGCTCCAAAAACTCCGTTATTGGTGATGACCGCAAAGTGCACGGGCCGCAAGTAA

mRNA sequence

GATTGTCCTTTGATTTGCATGGGTGAGAGTGGCCAATACGTCGACTCAATAAGCCTACCATTTTGGGGACAAGACCGAATGGGGAGCTGGGAACATAATCGTACAAGATGGAATTCACTCCTTCCCGACTTTAGGGAAGCAGCTGGTGTTACGGACACTCGTGAAGGACTAACTAGTCGATATTGGCCTATGTCCGTGGACACAGAAAATATGTCTGCAGTGAGAAGAGTACAACTGTCCATTAGGTCCCACTGTGTCTTCCCTACTATTCTCTGGGCCAAGAACGACTTATGGGAGTCTATAGAGATAGACAATGGAAAGGGAATGCTTGAAGGTTCAAGCACTAGAGAGATATATGGAGATGAAGATATTCCATGCAAGGAAACCCCTCAAGATCCAAGACACATGGTGGTAATGCAAGCCAAAGTGGATTCTAGGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACTGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAGAGTTCTAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTCCACTAAACCGAGACTACATATACATGGAAAACACGCTGGCGTCGAGTCGCCAAGGCGCAGCGTCGAGACGCTGCGAACATTCTTCTTCGATCCGAATTCGCGTCGGCGTCGAGACGCTGGCTTCATGACTCGACTTCCTGCTCTATTTCTCGGCTTTGTCTCGCTTCTTCTCTCTTCAGGGCTTCAATCTTTGGCTTTTGGTGTCACAATTCAGGCCCGCTTCAGCACAATTGGGTCTTTTCACCTCCTCGCCGTCCAAGACATTGAGATGGCTCCAAAAACTCCGTTATTGGTGATGACCGCAAAGTGCACGGGCCGCAAGTAA

Coding sequence (CDS)

GATTGTCCTTTGATTTGCATGGGTGAGAGTGGCCAATACGTCGACTCAATAAGCCTACCATTTTGGGGACAAGACCGAATGGGGAGCTGGGAACATAATCGTACAAGATGGAATTCACTCCTTCCCGACTTTAGGGAAGCAGCTGGTGTTACGGACACTCGTGAAGGACTAACTAGTCGATATTGGCCTATGTCCGTGGACACAGAAAATATGTCTGCAGTGAGAAGAGTACAACTGTCCATTAGGTCCCACTGTGTCTTCCCTACTATTCTCTGGGCCAAGAACGACTTATGGGAGTCTATAGAGATAGACAATGGAAAGGGAATGCTTGAAGGTTCAAGCACTAGAGAGATATATGGAGATGAAGATATTCCATGCAAGGAAACCCCTCAAGATCCAAGACACATGGTGGTAATGCAAGCCAAAGTGGATTCTAGGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACTGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAGAGTTCTAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTCCACTAAACCGAGACTACATATACATGGAAAACACGCTGGCGTCGAGTCGCCAAGGCGCAGCGTCGAGACGCTGCGAACATTCTTCTTCGATCCGAATTCGCGTCGGCGTCGAGACGCTGGCTTCATGACTCGACTTCCTGCTCTATTTCTCGGCTTTGTCTCGCTTCTTCTCTCTTCAGGGCTTCAATCTTTGGCTTTTGGTGTCACAATTCAGGCCCGCTTCAGCACAATTGGGTCTTTTCACCTCCTCGCCGTCCAAGACATTGAGATGGCTCCAAAAACTCCGTTATTGGTGATGACCGCAAAGTGCACGGGCCGCAAGTAA

Protein sequence

DCPLICMGESGQYVDSISLPFWGQDRMGSWEHNRTRWNSLLPDFREAAGVTDTREGLTSRYWPMSVDTENMSAVRRVQLSIRSHCVFPTILWAKNDLWESIEIDNGKGMLEGSSTREIYGDEDIPCKETPQDPRHMVVMQAKVDSRPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIESTKPRLHIHGKHAGVESPRRSVETLRTFFFDPNSRRRRDAGFMTRLPALFLGFVSLLLSSGLQSLAFGVTIQARFSTIGSFHLLAVQDIEMAPKTPLLVMTAKCTGRK
Homology
[Close]
BLAST of Spg037174 vs. NCBI nr
Match: TYK05792.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 86.3 bits (212), Expect = 5.0e-13
Identity = 35/46 (76.09%), Postives = 38/46 (82.61%), Query Frame = 0 

Query: 1   DCPLICMGESGQYVDSISLPFWGQDRMGSWEHNRTRWNSLLPDFRE 47
           DCPL C GESGQ VDSI L FWGQDR+GSWEHN TRWNS +P FR+
Sbjct: 568 DCPLTCTGESGQIVDSICLSFWGQDRVGSWEHNHTRWNSRIPTFRK 613

[Close]
BLAST of Spg037174 vs. NCBI nr
Match: KAA0052218.1 (uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa] >TYK01785.1 uncharacterized protein E5676_scaffold113G00130 [Cucumis melo var. makuwa])

HSP 1 Score: 85.1 bits (209), Expect = 1.1e-12
Identity = 41/48 (85.42%), Postives = 45/48 (93.75%), Query Frame = 0 

Query: 147 PRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIES 195
           PRGNR +L TG+LDKTVEIELPVPDTLPTSAESS+S+SSTWLELY ES
Sbjct: 79  PRGNRPNLHTGKLDKTVEIELPVPDTLPTSAESSKSNSSTWLELYFES 126

[Close]
BLAST of Spg037174 vs. NCBI nr
Match: TYJ96965.1 (uncharacterized protein E5676_scaffold506G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 84.3 bits (207), Expect = 1.9e-12
Identity = 42/48 (87.50%), Postives = 44/48 (91.67%), Query Frame = 0 

Query: 147 PRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIES 195
           PRGNR S QTG+LDKTVEIELPVPDTLPTSAESS S+SSTWLELY ES
Sbjct: 137 PRGNRPSRQTGKLDKTVEIELPVPDTLPTSAESSGSNSSTWLELYFES 184

[Close]
BLAST of Spg037174 vs. NCBI nr
Match: KAA0062263.1 (hypothetical protein E6C27_scaffold679G00320 [Cucumis melo var. makuwa])

HSP 1 Score: 84.0 bits (206), Expect = 2.5e-12
Identity = 46/99 (46.46%), Postives = 61/99 (61.62%), Query Frame = 0 

Query: 147 PRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIESTKPRL------- 206
           PRGNR SLQ G+L+KTVEIELP+PDTLPTS+ESS+S+SSTWLELY ES    +       
Sbjct: 91  PRGNRPSLQIGKLEKTVEIELPMPDTLPTSSESSKSNSSTWLELYFESVHVEIFCYFTKQ 150

Query: 207 ---HIHGKHAGVESPRRSVETLRTFFFDPNSRRRRDAGF 236
               +H  + G +  + S+E   +  F  +   R+   F
Sbjct: 151 VMSELHLMYVGKQGKQGSLEETMSVGFTSSFGLRKQVTF 189

[Close]
BLAST of Spg037174 vs. NCBI nr
Match: KAA0026081.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 83.2 bits (204), Expect = 4.2e-12
Identity = 36/45 (80.00%), Postives = 37/45 (82.22%), Query Frame = 0 

Query: 1   DCPLICMGESGQYVDSISLPFWGQDRMGSWEHNRTRWNSLLPDFR 46
           DCPLIC GESGQ VDSI L F GQDR+GSWEHN TRWN LLP FR
Sbjct: 95  DCPLICTGESGQIVDSICLSFLGQDRLGSWEHNYTRWNKLLPVFR 139

[Close]
BLAST of Spg037174 vs. ExPASy TrEMBL
Match: A0A5D3C3J6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002960 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.4e-13
Identity = 35/46 (76.09%), Postives = 38/46 (82.61%), Query Frame = 0 

Query: 1   DCPLICMGESGQYVDSISLPFWGQDRMGSWEHNRTRWNSLLPDFRE 47
           DCPL C GESGQ VDSI L FWGQDR+GSWEHN TRWNS +P FR+
Sbjct: 568 DCPLTCTGESGQIVDSICLSFWGQDRVGSWEHNHTRWNSRIPTFRK 613

[Close]
BLAST of Spg037174 vs. ExPASy TrEMBL
Match: A0A5A7UAH6 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00130 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 5.4e-13
Identity = 41/48 (85.42%), Postives = 45/48 (93.75%), Query Frame = 0 

Query: 147 PRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIES 195
           PRGNR +L TG+LDKTVEIELPVPDTLPTSAESS+S+SSTWLELY ES
Sbjct: 79  PRGNRPNLHTGKLDKTVEIELPVPDTLPTSAESSKSNSSTWLELYFES 126

[Close]
BLAST of Spg037174 vs. ExPASy TrEMBL
Match: A0A5D3BET3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G00070 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 9.2e-13
Identity = 42/48 (87.50%), Postives = 44/48 (91.67%), Query Frame = 0 

Query: 147 PRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIES 195
           PRGNR S QTG+LDKTVEIELPVPDTLPTSAESS S+SSTWLELY ES
Sbjct: 137 PRGNRPSRQTGKLDKTVEIELPVPDTLPTSAESSGSNSSTWLELYFES 184

[Close]
BLAST of Spg037174 vs. ExPASy TrEMBL
Match: A0A5A7V2F2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold679G00320 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.2e-12
Identity = 46/99 (46.46%), Postives = 61/99 (61.62%), Query Frame = 0 

Query: 147 PRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIESTKPRL------- 206
           PRGNR SLQ G+L+KTVEIELP+PDTLPTS+ESS+S+SSTWLELY ES    +       
Sbjct: 91  PRGNRPSLQIGKLEKTVEIELPMPDTLPTSSESSKSNSSTWLELYFESVHVEIFCYFTKQ 150

Query: 207 ---HIHGKHAGVESPRRSVETLRTFFFDPNSRRRRDAGF 236
               +H  + G +  + S+E   +  F  +   R+   F
Sbjct: 151 VMSELHLMYVGKQGKQGSLEETMSVGFTSSFGLRKQVTF 189

[Close]
BLAST of Spg037174 vs. ExPASy TrEMBL
Match: A0A5A7SPG1 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G00120 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.1e-12
Identity = 36/45 (80.00%), Postives = 37/45 (82.22%), Query Frame = 0 

Query: 1   DCPLICMGESGQYVDSISLPFWGQDRMGSWEHNRTRWNSLLPDFR 46
           DCPLIC GESGQ VDSI L F GQDR+GSWEHN TRWN LLP FR
Sbjct: 95  DCPLICTGESGQIVDSICLSFLGQDRLGSWEHNYTRWNKLLPVFR 139

The following BLAST results are available for this feature:
BLAST of Spg037174 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK05792.15.0e-1376.09gag/pol protein [Cucumis melo var. makuwa][more]
KAA0052218.11.1e-1285.42uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa] >TYK0... [more]
TYJ96965.11.9e-1287.50uncharacterized protein E5676_scaffold506G00070 [Cucumis melo var. makuwa][more]
KAA0062263.12.5e-1246.46hypothetical protein E6C27_scaffold679G00320 [Cucumis melo var. makuwa][more]
KAA0026081.14.2e-1280.00pol protein [Cucumis melo var. makuwa][more]
BLAST of Spg037174 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg037174 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3C3J62.4e-1376.09Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00296... [more]
A0A5A7UAH65.4e-1385.42CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A5D3BET39.2e-1387.50Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V2F21.2e-1246.46Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7SPG12.1e-1280.00Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G00120 PE=... [more]
BLAST of Spg037174 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg037174.1Spg037174.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0008270 zinc ion binding