Spg037120 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg037120
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ty3-gypsy retrotransposon protein
Location	scaffold1: 52015978 .. 52017769 (+)
RNA-Seq Expression	Spg037120
Synteny	Spg037120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGGATCCCAAGAAAAATATGATTCCATCGAAGATGAGAACGAAGGTTGGATCCTTGTCGTTCGTCGCAAAAAGCAAAAGCAAAGTTACGCACGGAAAGAGTCTCGCCTATTTCGAGACAATAAAAGAAAGGTTAAATCCCAAAGGAAGAAGGGAAAAAAGAAGTCAAGGAGGTCAAAGCCTGTCATGGAGGAAGGTGAAGATTTCTTTTGCCCTCCACAACCCATAACTTTGGCAGAATACTTTCCAAGGCGCTTTCTCGGTGATAGTCTAGGAAAGGCACTTGAAACTGTCACGTGTCACATTGTGGACCTGGTGGAAGATGATGATGTCCCTGCTATCTCCTCGAGAACGGTGGCAGGTCCAGGAGACTTATCCTCCTTCAGCATAAAGGATTTACTGTCACTTCCTCAGGAAGCTAAAAGTGTCCTTATTAATGCATTGATAGAGTCCGATGGTACAAACATCCCAACCCGAGAACAAAGGGTAAGTCGGATCCTCATCGACGATGGATCAACTGTCAATATAATGCCTAAGTCAACCATGAAGCAATTAGGCATCTCAATGGAAGAATTATCAAACAATAAATTGGTGATTCAAGGTTTCAATCAAGGCGAACAACGAGCGATTGGCATGATACGCCTCGAGCTCATCATTGGGGATTTGAAGGTCGATACTTTGTTTCATGTGATAGATTCCAAGACCACTTATAAGCTGCTATTAGGTCATCCTTGGATCCAATGCAATGGAGTGATAACCTCTACATTGCACCAGTGCTTCAAATTCTATCAAGATGGCATTAAAAAAGTTGAAGCTGACACTAACCTATTTTCAGAAGTTGAATCCCATTTCACAGATGCAAAATTTTATATGAAAAACGACAACATAGGGGAAATTATACCTACAGAAATCCCCTTGATAAAAAAATGATAAACTCGACTTAGAGCCACAAGCAGATGCAGGGAAGGAAGTTGTTGAGGATGTGAAGGCATCTGACCTGAAAAAGGGTGAAACATCTACAAGTCTTGTGAAACCTAAAGTTGTAAAACATGAGAAGTGTTCACCTGTCCTACAATACGTCCCTTTATCTTGGCATAAAAAGGGTGAATCACCTTTCACTGAATGTCCAAAAAGCATAAAGGTCGGTGACGTTGAAATACTGAAGGAAAGTTTCACTACGCCTCTTACAAAGATCACAAAGCAAGAGGTTAAGAAACATCAGGATGACCAGATAAAAATTATTTTGCCTGACAAACGAACTAAAGACGCGTTCGACCCCAAGGCATACAAACTTCTAGCGAACGCGGGTTATGACTTCACAACTCACACTGAGTTTAAAAGTCTAAGGGTTTTTGATAAAAGATCTAAGCTCTCCGCAACATAGAAGAAGCTTCTAAAGGAAGGTTATAGTCTTCCTACAACGAGAAAAGGGCTTGGATATAAGTCGCAAGAACCGGTTCGCATAACAAGAAGAGGGAAGGCGAAAGTGCCAGACACAAATCATATAACAGTAGAGGAGGTTGATGATTCAAAAGAAAAAGAGAGTGTCGACCAACGAACTTCTGTTTTTAGGCGCATCAGGCCACCAGTTGCTCGTGCTTTAGTCTTTCAGAGATTAAGTGTCAATGAAACGAAAGAAGAGAGCACACAACCTACTAATAGCTCCACTCAACCTTCAGTGTTTCGAAGGTTAAGTATGCCCATTGGGAAAGAAGAGAGTACATTTTCAACTCTGAATGTCACTCGACCTTCAACTTTTGAAAGGTTAAATATGCCCATTGCGAAATAA

mRNA sequence

ATGAAGGGATCCCAAGAAAAATATGATTCCATCGAAGATGAGAACGAAGGTTGGATCCTTGTCGTTCGTCGCAAAAAGCAAAAGCAAAGTTACGCACGGAAAGAGTCTCGCCTATTTCGAGACAATAAAAGAAAGGTTAAATCCCAAAGGAAGAAGGGAAAAAAGAAGTCAAGGAGGTCAAAGCCTGTCATGGAGGAAGGTGAAGATTTCTTTTGCCCTCCACAACCCATAACTTTGGCAGAATACTTTCCAAGGCGCTTTCTCGGTGATAGTCTAGGAAAGGCACTTGAAACTGTCACGTGTCACATTGTGGACCTGGTGGAAGATGATGATGTCCCTGCTATCTCCTCGAGAACGGTGGCAGTTGTTGAGGATGTGAAGGCATCTGACCTGAAAAAGGGTGAAACATCTACAAGTCTTGTGAAACCTAAAGTTGTAAAACATGAGAAGTGTTCACCTGTCCTACAATACGTCCCTTTATCTTGGCATAAAAAGGGTGAATCACCTTTCACTGAATGTCCAAAAAGCATAAAGAAGAAGCTTCTAAAGGAAGGTTATAGTCTTCCTACAACGAGAAAAGGGCTTGGATATAAGTCGCAAGAACCGGTTCGCATAACAAGAAGAGGGAAGGCGAAAGTGCCAGACACAAATCATATAACAGTAGAGGAGGTTGATGATTCAAAAGAAAAAGAGAGTGTCGACCAACGAACTTCTGTTTTTAGGCGCATCAGGCCACCAGTTGCTCGTGCTTTAGTCTTTCAGAGATTAAGTGTCAATGAAACGAAAGAAGAGAGCACACAACCTACTAATAGCTCCACTCAACCTTCAGTGTTTCGAAGGTTAAGTATGCCCATTGGGAAAGAAGAGAGTACATTTTCAACTCTGAATGTCACTCGACCTTCAACTTTTGAAAGGTTAAATATGCCCATTGCGAAATAA

Coding sequence (CDS)

ATGAAGGGATCCCAAGAAAAATATGATTCCATCGAAGATGAGAACGAAGGTTGGATCCTTGTCGTTCGTCGCAAAAAGCAAAAGCAAAGTTACGCACGGAAAGAGTCTCGCCTATTTCGAGACAATAAAAGAAAGGTTAAATCCCAAAGGAAGAAGGGAAAAAAGAAGTCAAGGAGGTCAAAGCCTGTCATGGAGGAAGGTGAAGATTTCTTTTGCCCTCCACAACCCATAACTTTGGCAGAATACTTTCCAAGGCGCTTTCTCGGTGATAGTCTAGGAAAGGCACTTGAAACTGTCACGTGTCACATTGTGGACCTGGTGGAAGATGATGATGTCCCTGCTATCTCCTCGAGAACGGTGGCAGTTGTTGAGGATGTGAAGGCATCTGACCTGAAAAAGGGTGAAACATCTACAAGTCTTGTGAAACCTAAAGTTGTAAAACATGAGAAGTGTTCACCTGTCCTACAATACGTCCCTTTATCTTGGCATAAAAAGGGTGAATCACCTTTCACTGAATGTCCAAAAAGCATAAAGAAGAAGCTTCTAAAGGAAGGTTATAGTCTTCCTACAACGAGAAAAGGGCTTGGATATAAGTCGCAAGAACCGGTTCGCATAACAAGAAGAGGGAAGGCGAAAGTGCCAGACACAAATCATATAACAGTAGAGGAGGTTGATGATTCAAAAGAAAAAGAGAGTGTCGACCAACGAACTTCTGTTTTTAGGCGCATCAGGCCACCAGTTGCTCGTGCTTTAGTCTTTCAGAGATTAAGTGTCAATGAAACGAAAGAAGAGAGCACACAACCTACTAATAGCTCCACTCAACCTTCAGTGTTTCGAAGGTTAAGTATGCCCATTGGGAAAGAAGAGAGTACATTTTCAACTCTGAATGTCACTCGACCTTCAACTTTTGAAAGGTTAAATATGCCCATTGCGAAATAA

Protein sequence

MKGSQEKYDSIEDENEGWILVVRRKKQKQSYARKESRLFRDNKRKVKSQRKKGKKKSRRSKPVMEEGEDFFCPPQPITLAEYFPRRFLGDSLGKALETVTCHIVDLVEDDDVPAISSRTVAVVEDVKASDLKKGETSTSLVKPKVVKHEKCSPVLQYVPLSWHKKGESPFTECPKSIKKKLLKEGYSLPTTRKGLGYKSQEPVRITRRGKAKVPDTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNETKEESTQPTNSSTQPSVFRRLSMPIGKEESTFSTLNVTRPSTFERLNMPIAK

Homology

[Close]

BLAST of Spg037120 vs. NCBI nr
Match: KAA0043405.1 (hypothetical protein E6C27_scaffold1639G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 157.1 bits (396), Expect = 2.4e-34
Identity = 92/192 (47.92%), Postives = 121/192 (63.02%), Query Frame = 0


Query: 132 KKGETSTSLVKPKVVKHEKCSP--VLQYVPLSWHKKGESPFTECPKSIK----------- 191
           +KGE STS  K  ++  EK S   +L+YVPLS  +KGESPF + P+ +K           
Sbjct: 70  RKGEASTSTTKSMILMDEKTSNPLILRYVPLSRRQKGESPFVKFPQGLKVGDMKQPKLSL 129

Query: 192 --KKLLKEGYSLPTTRKGLGYKSQEPVRITRRGKAKVPDTNHITVEEVDDSKEKESVDQR 251
             KKLL+EG+ +P +RKG GYKS EP+ I R+ K KV D+NHITV EVD  +EKE   QR
Sbjct: 130 IQKKLLREGHVIPVSRKGPGYKSPEPIHIIRKRKKKVIDSNHITVGEVDSMEEKEGGSQR 189

Query: 252 TSVFRRIRPPVARALVFQRLSVNETKEESTQPTNSSTQPSVFRRLSMPIGKEESTFSTLN 309
            S F +IRP V R  VF+RLSV +T+ +  Q T+S  + S  +RL+M   KE+ T   L 
Sbjct: 190 ISAFDQIRPHVVRTTVFERLSVTKTERKCHQSTSSLNKRSALQRLTMTFKKEKCTCQALR 249

[Close]

BLAST of Spg037120 vs. NCBI nr
Match: KAA0055957.1 (uncharacterized protein E6C27_scaffold319G00830 [Cucumis melo var. makuwa])

HSP 1 Score: 156.8 bits (395), Expect = 3.1e-34
Identity = 96/221 (43.44%), Postives = 126/221 (57.01%), Query Frame = 0


Query: 133 KGETSTSLVKPKVVKHEKCS--PVLQYVPLSWHKKGESPFTECPKSIK------------ 192
           K E ST+  K  ++  EK S  P+L+YVPLS  KKGESPF E P+ +K            
Sbjct: 203 KSEASTNTAKSVILMDEKTSNPPILRYVPLSRRKKGESPFVESPQGLKRRTKDGFDPKAY 262

Query: 193 -------------------------------KKLLKEGYSLPTTRKGLGYKSQEPVRITR 252
                                          KKLL+EG+ +P +RKGLGYKS EP+RITR
Sbjct: 263 KLMAKAGYDFITHTEFKSLKIHEQPKLSSTQKKLLREGHVIPMSRKGLGYKSPEPIRITR 322

Query: 253 RGKAKVPDTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNETKEESTQ 309
           +GK KV D NHITV+EVD  +EKE  +QRTS F RI P VARA VF+RLS+ E K +  Q
Sbjct: 323 KGKKKVVDNNHITVKEVDSMEEKEGDNQRTSTFDRISPHVARAPVFERLSMTEAKRKDHQ 382

[Close]

BLAST of Spg037120 vs. NCBI nr
Match: KAA0061113.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK03782.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 154.8 bits (390), Expect = 1.2e-33
Identity = 143/480 (29.79%), Postives = 195/480 (40.62%), Query Frame = 0


Query: 4   SQEKYDSIEDENEGWILVVRRKKQKQSYARKESRLFRDNKRKVKSQRKKGKKKSRRSKPV 63
           SQEK   IE+++EGW +V RRKK+K +  +KESRL+ + +R  K+Q+ K KKK+R+ K V
Sbjct: 467 SQEKERLIEEDDEGWTVVTRRKKRKSTLIQKESRLYINYRRGNKTQKNKKKKKTRKLKLV 526

Query: 64  MEEGEDFFCPPQPITLAEYFPRRFLGDS-------------------------------- 123
            E+ +DF    + +TLA++FP RFLGD                                 
Sbjct: 527 HEKDKDFPRTQRVVTLADFFPTRFLGDHQDENPGVVASASSSSAPIATYESTPYCMSIDF 586

Query: 124 ------LGKALETVTCHIVDLVED------------------------------------ 183
                 LG  L     ++   V++                                    
Sbjct: 587 SDEDLLLGSKLHNRPLYVSGYVQEQRVERILVDNGSAVNIMPKSTMRQLGILMEELSNSK 646

Query: 184 ----------------------DDVPAISSRTVAVVEDVKASDLK--------------- 243
                                 D  P + S  V +V       LK               
Sbjct: 647 LVIQGFNQGSQRVIDAKFYLKNDGSPEVVSVEVPLVNKEDNLQLKSLASRESHKSTGTFH 706

Query: 244 --KGETSTSLVKPKVVKHEKCS--PVLQYVPLSWHKKGESPFTECPKSIK---------- 292
             K E STS  K  +V  EK S  P+L+YVPLS  KKGESPF E P+ +K          
Sbjct: 707 SGKSEASTSTAKSVIVMDEKTSNPPILRYVPLSRRKKGESPFVEFPQGLKVGDIEVLKES 766

[Close]

BLAST of Spg037120 vs. NCBI nr
Match: TYK28162.1 (uncharacterized protein E5676_scaffold289G00760 [Cucumis melo var. makuwa])

HSP 1 Score: 153.3 bits (386), Expect = 3.5e-33
Identity = 96/231 (41.56%), Postives = 127/231 (54.98%), Query Frame = 0


Query: 133 KGETSTSLVKPKVVKHEKCS--PVLQYVPLSWHKKGESPFTECPKSIK------------ 192
           K E ST+  K  ++  EK S  P+L+YVPLS  KKGESPF E P+ +K            
Sbjct: 167 KSEASTNTAKSVILMDEKTSNPPILRYVPLSRRKKGESPFVESPQGLKIDLTEASLPQRR 226

Query: 193 -----------------------------------------KKLLKEGYSLPTTRKGLGY 252
                                                    KKLL+EG+ +P +RKGLGY
Sbjct: 227 TKDGFDPKAYKLMAKAGYDFTTHTDFKSLKIHEQPKLSSTQKKLLREGHVIPMSRKGLGY 286

Query: 253 KSQEPVRITRRGKAKVPDTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLS 309
           KS EP+RITR+GK KV D+NHITV+EVD  +EKE  +QRTS F RI P VARA VF+RLS
Sbjct: 287 KSPEPIRITRKGKEKVVDSNHITVKEVDSMEEKEGDNQRTSTFDRISPHVARAPVFERLS 346

[Close]

BLAST of Spg037120 vs. NCBI nr
Match: KAA0047672.1 (uncharacterized protein E6C27_scaffold115G001730 [Cucumis melo var. makuwa] >TYK08327.1 uncharacterized protein E5676_scaffold648G001250 [Cucumis melo var. makuwa])

HSP 1 Score: 153.3 bits (386), Expect = 3.5e-33
Identity = 90/184 (48.91%), Postives = 122/184 (66.30%), Query Frame = 0


Query: 133 KGETSTSLVKPKVVKHEKCS--PVLQYVPLSWHKKGESPFTECPKSIKK---KLLKEGYS 192
           K E STS  K  ++ +E  S  P+L+YVPLS  KKGESPF E P+ +K    ++LKE ++
Sbjct: 704 KNEASTSTAKSVILMNENTSNPPILRYVPLSRCKKGESPFVESPQGLKVGDIEVLKESFT 763

Query: 193 L---PTTRKGLGYKSQEPVRITRRGKAKVPDTNHITVEEVDDSKEKESVDQRTSVFRRIR 252
           +     T+KGLGYKS EP+RITR+GK KV D+NHITV+EVD  + KE   QRTS F RI 
Sbjct: 764 IQLTKITKKGLGYKSPEPIRITRKGKEKVVDSNHITVKEVDSMEGKEGHSQRTSAFDRIS 823

Query: 253 PPVARALVFQRLSVNETKEESTQPTNSSTQPSVFRRLSMPIGKEESTFSTLNVTRPSTFE 309
           P VARA VF+RLS+ E K +  Q T++  + S F+RL++   +E+        T+PS FE
Sbjct: 824 PHVARAPVFERLSMTEAKRKDHQSTSNLDRRSAFQRLTITFKEEKGICQASMTTKPSAFE 883

[Close]

BLAST of Spg037120 vs. ExPASy TrEMBL
Match: A0A5A7TPR5 (RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1639G00040 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.2e-34
Identity = 92/192 (47.92%), Postives = 121/192 (63.02%), Query Frame = 0


Query: 132 KKGETSTSLVKPKVVKHEKCSP--VLQYVPLSWHKKGESPFTECPKSIK----------- 191
           +KGE STS  K  ++  EK S   +L+YVPLS  +KGESPF + P+ +K           
Sbjct: 70  RKGEASTSTTKSMILMDEKTSNPLILRYVPLSRRQKGESPFVKFPQGLKVGDMKQPKLSL 129

Query: 192 --KKLLKEGYSLPTTRKGLGYKSQEPVRITRRGKAKVPDTNHITVEEVDDSKEKESVDQR 251
             KKLL+EG+ +P +RKG GYKS EP+ I R+ K KV D+NHITV EVD  +EKE   QR
Sbjct: 130 IQKKLLREGHVIPVSRKGPGYKSPEPIHIIRKRKKKVIDSNHITVGEVDSMEEKEGGSQR 189

Query: 252 TSVFRRIRPPVARALVFQRLSVNETKEESTQPTNSSTQPSVFRRLSMPIGKEESTFSTLN 309
            S F +IRP V R  VF+RLSV +T+ +  Q T+S  + S  +RL+M   KE+ T   L 
Sbjct: 190 ISAFDQIRPHVVRTTVFERLSVTKTERKCHQSTSSLNKRSALQRLTMTFKKEKCTCQALR 249

[Close]

BLAST of Spg037120 vs. ExPASy TrEMBL
Match: A0A5A7UMY2 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G00830 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.5e-34
Identity = 96/221 (43.44%), Postives = 126/221 (57.01%), Query Frame = 0


Query: 133 KGETSTSLVKPKVVKHEKCS--PVLQYVPLSWHKKGESPFTECPKSIK------------ 192
           K E ST+  K  ++  EK S  P+L+YVPLS  KKGESPF E P+ +K            
Sbjct: 203 KSEASTNTAKSVILMDEKTSNPPILRYVPLSRRKKGESPFVESPQGLKRRTKDGFDPKAY 262

Query: 193 -------------------------------KKLLKEGYSLPTTRKGLGYKSQEPVRITR 252
                                          KKLL+EG+ +P +RKGLGYKS EP+RITR
Sbjct: 263 KLMAKAGYDFITHTEFKSLKIHEQPKLSSTQKKLLREGHVIPMSRKGLGYKSPEPIRITR 322

Query: 253 RGKAKVPDTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNETKEESTQ 309
           +GK KV D NHITV+EVD  +EKE  +QRTS F RI P VARA VF+RLS+ E K +  Q
Sbjct: 323 KGKKKVVDNNHITVKEVDSMEEKEGDNQRTSTFDRISPHVARAPVFERLSMTEAKRKDHQ 382

[Close]

BLAST of Spg037120 vs. ExPASy TrEMBL
Match: A0A5D3BY54 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001700 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 5.8e-34
Identity = 143/480 (29.79%), Postives = 195/480 (40.62%), Query Frame = 0


Query: 4   SQEKYDSIEDENEGWILVVRRKKQKQSYARKESRLFRDNKRKVKSQRKKGKKKSRRSKPV 63
           SQEK   IE+++EGW +V RRKK+K +  +KESRL+ + +R  K+Q+ K KKK+R+ K V
Sbjct: 467 SQEKERLIEEDDEGWTVVTRRKKRKSTLIQKESRLYINYRRGNKTQKNKKKKKTRKLKLV 526

Query: 64  MEEGEDFFCPPQPITLAEYFPRRFLGDS-------------------------------- 123
            E+ +DF    + +TLA++FP RFLGD                                 
Sbjct: 527 HEKDKDFPRTQRVVTLADFFPTRFLGDHQDENPGVVASASSSSAPIATYESTPYCMSIDF 586

Query: 124 ------LGKALETVTCHIVDLVED------------------------------------ 183
                 LG  L     ++   V++                                    
Sbjct: 587 SDEDLLLGSKLHNRPLYVSGYVQEQRVERILVDNGSAVNIMPKSTMRQLGILMEELSNSK 646

Query: 184 ----------------------DDVPAISSRTVAVVEDVKASDLK--------------- 243
                                 D  P + S  V +V       LK               
Sbjct: 647 LVIQGFNQGSQRVIDAKFYLKNDGSPEVVSVEVPLVNKEDNLQLKSLASRESHKSTGTFH 706

Query: 244 --KGETSTSLVKPKVVKHEKCS--PVLQYVPLSWHKKGESPFTECPKSIK---------- 292
             K E STS  K  +V  EK S  P+L+YVPLS  KKGESPF E P+ +K          
Sbjct: 707 SGKSEASTSTAKSVIVMDEKTSNPPILRYVPLSRRKKGESPFVEFPQGLKVGDIEVLKES 766

[Close]

BLAST of Spg037120 vs. ExPASy TrEMBL
Match: A0A5D3C8N8 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001250 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 1.7e-33
Identity = 90/184 (48.91%), Postives = 122/184 (66.30%), Query Frame = 0


Query: 133 KGETSTSLVKPKVVKHEKCS--PVLQYVPLSWHKKGESPFTECPKSIKK---KLLKEGYS 192
           K E STS  K  ++ +E  S  P+L+YVPLS  KKGESPF E P+ +K    ++LKE ++
Sbjct: 704 KNEASTSTAKSVILMNENTSNPPILRYVPLSRCKKGESPFVESPQGLKVGDIEVLKESFT 763

Query: 193 L---PTTRKGLGYKSQEPVRITRRGKAKVPDTNHITVEEVDDSKEKESVDQRTSVFRRIR 252
           +     T+KGLGYKS EP+RITR+GK KV D+NHITV+EVD  + KE   QRTS F RI 
Sbjct: 764 IQLTKITKKGLGYKSPEPIRITRKGKEKVVDSNHITVKEVDSMEGKEGHSQRTSAFDRIS 823

Query: 253 PPVARALVFQRLSVNETKEESTQPTNSSTQPSVFRRLSMPIGKEESTFSTLNVTRPSTFE 309
           P VARA VF+RLS+ E K +  Q T++  + S F+RL++   +E+        T+PS FE
Sbjct: 824 PHVARAPVFERLSMTEAKRKDHQSTSNLDRRSAFQRLTITFKEEKGICQASMTTKPSAFE 883

[Close]

BLAST of Spg037120 vs. ExPASy TrEMBL
Match: A0A5D3DXC7 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00760 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 1.7e-33
Identity = 96/231 (41.56%), Postives = 127/231 (54.98%), Query Frame = 0


Query: 133 KGETSTSLVKPKVVKHEKCS--PVLQYVPLSWHKKGESPFTECPKSIK------------ 192
           K E ST+  K  ++  EK S  P+L+YVPLS  KKGESPF E P+ +K            
Sbjct: 167 KSEASTNTAKSVILMDEKTSNPPILRYVPLSRRKKGESPFVESPQGLKIDLTEASLPQRR 226

Query: 193 -----------------------------------------KKLLKEGYSLPTTRKGLGY 252
                                                    KKLL+EG+ +P +RKGLGY
Sbjct: 227 TKDGFDPKAYKLMAKAGYDFTTHTDFKSLKIHEQPKLSSTQKKLLREGHVIPMSRKGLGY 286

Query: 253 KSQEPVRITRRGKAKVPDTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLS 309
           KS EP+RITR+GK KV D+NHITV+EVD  +EKE  +QRTS F RI P VARA VF+RLS
Sbjct: 287 KSPEPIRITRKGKEKVVDSNHITVKEVDSMEEKEGDNQRTSTFDRISPHVARAPVFERLS 346

The following BLAST results are available for this feature:

BLAST of Spg037120 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0043405.1	2.4e-34	47.92	hypothetical protein E6C27_scaffold1639G00040 [Cucumis melo var. makuwa]	[more]
KAA0055957.1	3.1e-34	43.44	uncharacterized protein E6C27_scaffold319G00830 [Cucumis melo var. makuwa]	[more]
KAA0061113.1	1.2e-33	29.79	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK03782.1 ty3-gyp...	[more]
TYK28162.1	3.5e-33	41.56	uncharacterized protein E5676_scaffold289G00760 [Cucumis melo var. makuwa]	[more]
KAA0047672.1	3.5e-33	48.91	uncharacterized protein E6C27_scaffold115G001730 [Cucumis melo var. makuwa] >TYK...	[more]

BLAST of Spg037120 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg037120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TPR5	1.2e-34	47.92	RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7UMY2	1.5e-34	43.44	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5D3BY54	5.8e-34	29.79	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3C8N8	1.7e-33	48.91	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G00125...	[more]
A0A5D3DXC7	1.7e-33	41.56	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of Spg037120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..278

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg037120.1	Spg037120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process