Spg036924 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg036924
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	serine/threonine-protein phosphatase 7 long form homolog isoform X1
Location	scaffold5: 40748174 .. 40751166 (-)
RNA-Seq Expression	Spg036924
Synteny	Spg036924

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCGATGGGCGACACTCGATGTGCCACCACTTCACTGTCTGCTCAGTGAGGGTCACAACCTACTCTCTTCTAGTATGGTTGTGACACGGCGCTTCATCTTCAACCCATGGATGAAGAAGGTTTATTTTGATTCAAATTTCATTTCTAAACATTATTATTGCTTGATTGAATTGAATTTGATTTTGTTAAATTTCATCAACAGGTATGGAGCTCGTGCAATGGATTTTGTAATGGATTTTGTAATATTAATTTGTAATGGACTTTGTAATAATATAATGAATCTTGATTTGTAGTGGACTTTGTTTGTAATGGATTATGTTTGTAATAGATTATGTAATAGACTTTATAATAGATTATGTTTTCTTTGTTTGTAATGGATTATGTTTGTTTGTAATGAATCTTGATTTGTAATAGACTTTATAATAGATTATGTTTTCTTTGTAATGAATCTTGATTTGTAGTTGCTAATGGACTTATGTGTTTTTAAATGTTCAGTATAAATATGGAACCTGGGCCAATTAACCCAAGACAATTATATTTACAACGTACGCACCGTTCACAGTCGATATGGGATGATCAATCTACTACTATCTTGCAATGTCGAAGAAGAGAGGCAGTGGTTAACAGAAATATCAATATAGATCAACGCATCGTGCCTTACGTACAACAAGCTGGATTTTGGGGGGTTGCACAGATTGGGTTCATGCAACTAAATTGGCATCTTATTACTGCGTTGGTTGAGCGATGGAGGCCAGAAACCCATACATTTCATATGCCTTGTGGAGAGTGTACGGTTACACTTCAAGATGTTGCAGTACAGTTCGGATTACCTATAGATGGAGAACCTGTAACTGGTTCATTGCAATATAATTGGGGTCAGGTATGTGAGGATTTTTTGGGAGTTCGACCCCCTGAATTGCATGGATCTAGATTAAGCATTCCATGGTTGGCAGCACAGTTTGCAGAGTTGCCCCCCAATGCCGACGAGATCACAATACAGAGGCATGCGAGAGCCTTTATTATGCAATTGATTGGAGGGTTTCTTTTTGCTGACAAGTCCAACACACTTGTTCATCTCATGTTTCTTCCACTTTTAGAAAACTTCGAGACAGTTGGACAATATTCTTGGGGTAGTGCATGTCTTGCATGGTTGTATAGAGAATTATGTCGAGCTAGTAGTGCCAGTGCATTAGAGATAGCCGGTCCACTAATACTACTACAAGTTTGGGCGTTCGATCGGTTTTCTATTGTCCGACCCCTACACGACTTGCCGACCCCTGGTCATTATGCTGGACGCCCACTTAGTGCTCGGTATGTTAAATTTACGTATAATTAAAATTTATCATAAATTTGCATAAAAGTATGCTTTAATTGTATTGAATGTAGATGGAATGGGATTTTGGCTGCATCTGAGCAAACTACAAATTTGTTGATCATGTATCGTATTACATTTGACCGTCTTATGCCCAACCAGGTAAAACAGTAATCAAATTTTTTCTTATTTAAAAAAAAATGTACATTAATAAATTTATTGTTTTATAAATTTCAGATCACATAGACACCATACACACCTGAGATTATGGCCTTACTACCAGACTATTGTCGTAATGGACGAGAGATTTGGTTAACTGTAAGCCCTCTCATATGTTTTCATATTGTAGAGTGGCATTACCCAAATCGAGTGCTAAGACAATTTGGAATGCGACAAATGGTGCCGCCATTTTGCGATACAGTCATAGAGTTACATCAGTTAGACTTGCGAGGTAAGCATGATCACGATTGGCGACATCATCATGCATCATATATATCACTGTGGCGTGCACGCCGTGATCATTGTGTCCTGGGCGACATAGTAGACATGCCAGTTGTGTCGGATGACTACTTACACTGGTATGATTCAATCACGAGGAGGTATATCACGCGTGAGGGTGCTTATTATGCTTGCACGGTATAGTATATACTTTGATTTTGTTATTATTGAATTTCAGTTACAAATATTTTTATTATTTTAATTATTTTCTTCTTGCAGAATAACTTTGTTCGAGATGTGCAACATTTTTCTGTGGAGCAAAATATACCACAGTTAGGTTCTATGTGTGAGCAATACGTCACGAACATAACTGATATCATTCAACAAACTAGGAGACTTACTGTTGCTGACACTGATCGGACACGTGCTCGTCGTAGACGCCGTCGACAACAGGCTGCAGACATTCCACAGCAGAATGAAGATGAAGAACCTCCTATAGTTGATGATGACACTTTAGCTCATCAAGTTCAGTCACTAGCAGATCAGACAGACATTGCTTCAAGTTCTGGACATGGTGACATAACTCAACAAGATATTGATGATGTGATTCATCACCAATCACACATGGAAGCGCCTCAACCTCGTCGTGGAGCTCGTCAGAGAAGACCACGTCGTTGTGGCACTTAGGATTTTACTTATTTTTTGTACTAGTTTTTGTAAAAGACGAAATTATTCCAGAAGATTGTTGTCAGTGAAATTTTAGAAAAATATCTATTTACATTAATTATTAAAAAAAAATAAATTTTACTTCGAAATAAATTTTAAATATGAAAATATTTAAATGTGGTATACAAAATTGCATACTTAATTAAAAAATTAAAAAAAAAAAAAAAAAAAAGTAAACTCGTGTACCTGGTACACGAGTTCAATGCAAAATCGTGTACCAGGTACACGAGTTTAATGTAAAATCGTGTACCAGGTACACGATTGTTACCACGTAAACCGTGTACCTGGTACGCGATGCTTACTGGAATCGTGTACCACGTACACGATTTTATCCAACGGAAATCGTGTCCAAGGTACACGATTGTTAACTACCCTAATTTTGTCAATAGTTTCAAACTTCACCCCACCTTTGTAATTTGTTATTTTAATTGCATTATTAATATTTTTATTTTGAAAACTACATTAGATTTGTCATTTTTTTTTTAAATTACATTATTCGAGAAATTACCCCAC

mRNA sequence

ATGGCCCGATGGGCGACACTCGATGTGCCACCACTTCACTGTCTGCTCAGTGAGGGTCACAACCTACTCTCTTCTAGTATGGTTGTGACACGGCGCTTCATCTTCAACCCATGGATGAAGAAGGTTTATTTTGATTCAAATTTCATTTCTAAACATTATTATTGCTTGATTGAATTGAATTTGATTTTGTTAAATTTCATCAACAGATGGAATGGGATTTTGGCTGCATCTGAGCAAACTACAAATTTGTTGATCATGTATCGTATTACATTTGACCGTCTTATGCCCAACCAGAATAACTTTGTTCGAGATGTGCAACATTTTTCTGTGGAGCAAAATATACCACAGTTAGGTTCTATGTGTGAGCAATACGTCACGAACATAACTGATATCATTCAACAAACTAGGAGACTTACTGTTGCTGACACTGATCGGACACGTGCTCGTCGTAGACGCCGTCGACAACAGGCTGCAGACATTCCACAGCAGAATGAAGATGAAGAACCTCCTATAGTTGATGATGACACTTTAGCTCATCAAGTTCAGTCACTAGCAGATCAGACAGACATTGCTTCAAGTTCTGGACATGGTGACATAACTCAACAAGATATTGATGATGTGATTCATCACCAATCACACATGGAAGCGCCTCAACCTCGTCGTGGAGCTCGTCAGAGAAGACCACGTCGTACACGATTGTTACCACGTAAACCGTGTACCTGGTACGCGATGCTTACTGGAATCGTGTACCACGTACACGATTTTATCCAACGGAAATCGTGTCCAAGGTACACGATTGTTAACTACCCTAATTTTGTCAATAGTTTCAAACTTCACCCCACCTTTGTAATTTGTTATTTTAATTGCATTATTAATATTTTTATTTTGAAAACTACATTAGATTTGTCATTTTTTTTTTAA

Coding sequence (CDS)

ATGGCCCGATGGGCGACACTCGATGTGCCACCACTTCACTGTCTGCTCAGTGAGGGTCACAACCTACTCTCTTCTAGTATGGTTGTGACACGGCGCTTCATCTTCAACCCATGGATGAAGAAGGTTTATTTTGATTCAAATTTCATTTCTAAACATTATTATTGCTTGATTGAATTGAATTTGATTTTGTTAAATTTCATCAACAGATGGAATGGGATTTTGGCTGCATCTGAGCAAACTACAAATTTGTTGATCATGTATCGTATTACATTTGACCGTCTTATGCCCAACCAGAATAACTTTGTTCGAGATGTGCAACATTTTTCTGTGGAGCAAAATATACCACAGTTAGGTTCTATGTGTGAGCAATACGTCACGAACATAACTGATATCATTCAACAAACTAGGAGACTTACTGTTGCTGACACTGATCGGACACGTGCTCGTCGTAGACGCCGTCGACAACAGGCTGCAGACATTCCACAGCAGAATGAAGATGAAGAACCTCCTATAGTTGATGATGACACTTTAGCTCATCAAGTTCAGTCACTAGCAGATCAGACAGACATTGCTTCAAGTTCTGGACATGGTGACATAACTCAACAAGATATTGATGATGTGATTCATCACCAATCACACATGGAAGCGCCTCAACCTCGTCGTGGAGCTCGTCAGAGAAGACCACGTCGTACACGATTGTTACCACGTAAACCGTGTACCTGGTACGCGATGCTTACTGGAATCGTGTACCACGTACACGATTTTATCCAACGGAAATCGTGTCCAAGGTACACGATTGTTAACTACCCTAATTTTGTCAATAGTTTCAAACTTCACCCCACCTTTGTAATTTGTTATTTTAATTGCATTATTAATATTTTTATTTTGAAAACTACATTAGATTTGTCATTTTTTTTTTAA

Protein sequence

MARWATLDVPPLHCLLSEGHNLLSSSMVVTRRFIFNPWMKKVYFDSNFISKHYYCLIELNLILLNFINRWNGILAASEQTTNLLIMYRITFDRLMPNQNNFVRDVQHFSVEQNIPQLGSMCEQYVTNITDIIQQTRRLTVADTDRTRARRRRRRQQAADIPQQNEDEEPPIVDDDTLAHQVQSLADQTDIASSSGHGDITQQDIDDVIHHQSHMEAPQPRRGARQRRPRRTRLLPRKPCTWYAMLTGIVYHVHDFIQRKSCPRYTIVNYPNFVNSFKLHPTFVICYFNCIINIFILKTTLDLSFFF

Homology

[Close]

BLAST of Spg036924 vs. NCBI nr
Match: XP_016902435.1 (PREDICTED: serine/threonine-protein phosphatase 7 long form homolog isoform X1 [Cucumis melo])

HSP 1 Score: 69.7 bits (169), Expect = 4.9e-08
Identity = 39/71 (54.93%), Postives = 52/71 (73.24%), Query Frame = 0


Query: 99  NNFVRDVQHFSVEQNIPQLGSMCEQYVTNITDIIQQTRRLTVADTDRTRARRRRRRQQ-- 158
           NNFV+DV+ +S+E N+  LGSMC+Q++ NI  IIQQT+RL VADTDR   RR+RRRQ   
Sbjct: 448 NNFVQDVRAYSMEHNLQDLGSMCDQFLENIEHIIQQTKRLNVADTDRRCIRRKRRRQDNN 507

Query: 159 -AADIPQQNED 167
              DI + ++D
Sbjct: 508 VVDDIVEGDQD 518

[Close]

BLAST of Spg036924 vs. NCBI nr
Match: XP_008459571.1 (PREDICTED: serine/threonine-protein phosphatase 7 long form homolog isoform X2 [Cucumis melo])

HSP 1 Score: 69.7 bits (169), Expect = 4.9e-08
Identity = 39/71 (54.93%), Postives = 52/71 (73.24%), Query Frame = 0


Query: 99  NNFVRDVQHFSVEQNIPQLGSMCEQYVTNITDIIQQTRRLTVADTDRTRARRRRRRQQ-- 158
           NNFV+DV+ +S+E N+  LGSMC+Q++ NI  IIQQT+RL VADTDR   RR+RRRQ   
Sbjct: 430 NNFVQDVRAYSMEHNLQDLGSMCDQFLENIEHIIQQTKRLNVADTDRRCIRRKRRRQDNN 489

Query: 159 -AADIPQQNED 167
              DI + ++D
Sbjct: 490 VVDDIVEGDQD 500

[Close]

BLAST of Spg036924 vs. NCBI nr
Match: TYK16735.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 64.7 bits (156), Expect = 1.6e-06
Identity = 46/106 (43.40%), Postives = 58/106 (54.72%), Query Frame = 0


Query: 70  WNGILAASEQTT--NLLIMYRITFDRLMPNQN-------NFVRDVQHFSVEQNIPQLGSM 129
           W      SE T   N  + YR    R +  +        +FV  VQ FSVE +I  LG +
Sbjct: 86  WVEAPTTSEPTVSENYFVWYRSITRRFITQEGAFYHCMYDFVDKVQTFSVEHDIEALGQI 145

Query: 130 CEQYVTNITDIIQQTRRLTVADTDRTRARRRRRRQQAADIPQQNED 167
           C++    +  IIQQTRRLTVADTDR R RRRRRR Q  D+ + +ED
Sbjct: 146 CDRTTERVDHIIQQTRRLTVADTDRRRMRRRRRR-QGDDVVEGDED 190

[Close]

BLAST of Spg036924 vs. NCBI nr
Match: KAA0043956.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 64.7 bits (156), Expect = 1.6e-06
Identity = 42/92 (45.65%), Postives = 55/92 (59.78%), Query Frame = 0


Query: 82  NLLIMYRITFDRLMPNQN-------NFVRDVQHFSVEQNIPQLGSMCEQYVTNITDIIQQ 141
           N  + YR    R +  +        +FV +VQ FSVE NI  LG +C++    +  IIQ+
Sbjct: 194 NYFVWYRSITRRFITQEGAFYHCMYDFVDEVQTFSVEHNIEALGQICDRTTERVDHIIQK 253

Query: 142 TRRLTVADTDRTRARRRRRRQQAADIPQQNED 167
           TRRLTVADTDR R RRRRRR Q  D+ + +ED
Sbjct: 254 TRRLTVADTDRRRMRRRRRR-QGDDVVEGDED 284

[Close]

BLAST of Spg036924 vs. NCBI nr
Match: TYK03303.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa] >TYK12342.1 serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 64.3 bits (155), Expect = 2.1e-06
Identity = 42/92 (45.65%), Postives = 55/92 (59.78%), Query Frame = 0


Query: 82  NLLIMYRITFDRLMPNQN-------NFVRDVQHFSVEQNIPQLGSMCEQYVTNITDIIQQ 141
           N  + YR    R +  +        +FV +VQ FSVE +I  LG +C++    +  IIQQ
Sbjct: 488 NYFVWYRSITRRFITQEGAFYHCMYDFVDEVQTFSVEHDIEALGQICDRTTERVDHIIQQ 547

Query: 142 TRRLTVADTDRTRARRRRRRQQAADIPQQNED 167
           TRRLTVADTDR R RRRRRR Q  D+ + +ED
Sbjct: 548 TRRLTVADTDRRRMRRRRRR-QGDDVVEGDED 578

[Close]

BLAST of Spg036924 vs. ExPASy TrEMBL
Match: A0A1S4E383 (serine/threonine-protein phosphatase 7 long form homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498663 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.4e-08
Identity = 39/71 (54.93%), Postives = 52/71 (73.24%), Query Frame = 0


Query: 99  NNFVRDVQHFSVEQNIPQLGSMCEQYVTNITDIIQQTRRLTVADTDRTRARRRRRRQQ-- 158
           NNFV+DV+ +S+E N+  LGSMC+Q++ NI  IIQQT+RL VADTDR   RR+RRRQ   
Sbjct: 448 NNFVQDVRAYSMEHNLQDLGSMCDQFLENIEHIIQQTKRLNVADTDRRCIRRKRRRQDNN 507

Query: 159 -AADIPQQNED 167
              DI + ++D
Sbjct: 508 VVDDIVEGDQD 518

[Close]

BLAST of Spg036924 vs. ExPASy TrEMBL
Match: A0A1S3CBQ7 (serine/threonine-protein phosphatase 7 long form homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498663 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.4e-08
Identity = 39/71 (54.93%), Postives = 52/71 (73.24%), Query Frame = 0


Query: 99  NNFVRDVQHFSVEQNIPQLGSMCEQYVTNITDIIQQTRRLTVADTDRTRARRRRRRQQ-- 158
           NNFV+DV+ +S+E N+  LGSMC+Q++ NI  IIQQT+RL VADTDR   RR+RRRQ   
Sbjct: 430 NNFVQDVRAYSMEHNLQDLGSMCDQFLENIEHIIQQTKRLNVADTDRRCIRRKRRRQDNN 489

Query: 159 -AADIPQQNED 167
              DI + ++D
Sbjct: 490 VVDDIVEGDQD 500

[Close]

BLAST of Spg036924 vs. ExPASy TrEMBL
Match: A0A5A7TPE7 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G003010 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 7.7e-07
Identity = 42/92 (45.65%), Postives = 55/92 (59.78%), Query Frame = 0


Query: 82  NLLIMYRITFDRLMPNQN-------NFVRDVQHFSVEQNIPQLGSMCEQYVTNITDIIQQ 141
           N  + YR    R +  +        +FV +VQ FSVE NI  LG +C++    +  IIQ+
Sbjct: 194 NYFVWYRSITRRFITQEGAFYHCMYDFVDEVQTFSVEHNIEALGQICDRTTERVDHIIQK 253

Query: 142 TRRLTVADTDRTRARRRRRRQQAADIPQQNED 167
           TRRLTVADTDR R RRRRRR Q  D+ + +ED
Sbjct: 254 TRRLTVADTDRRRMRRRRRR-QGDDVVEGDED 284

[Close]

BLAST of Spg036924 vs. ExPASy TrEMBL
Match: A0A5D3CZ03 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005740 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 7.7e-07
Identity = 46/106 (43.40%), Postives = 58/106 (54.72%), Query Frame = 0


Query: 70  WNGILAASEQTT--NLLIMYRITFDRLMPNQN-------NFVRDVQHFSVEQNIPQLGSM 129
           W      SE T   N  + YR    R +  +        +FV  VQ FSVE +I  LG +
Sbjct: 86  WVEAPTTSEPTVSENYFVWYRSITRRFITQEGAFYHCMYDFVDKVQTFSVEHDIEALGQI 145

Query: 130 CEQYVTNITDIIQQTRRLTVADTDRTRARRRRRRQQAADIPQQNED 167
           C++    +  IIQQTRRLTVADTDR R RRRRRR Q  D+ + +ED
Sbjct: 146 CDRTTERVDHIIQQTRRLTVADTDRRRMRRRRRR-QGDDVVEGDED 190

[Close]

BLAST of Spg036924 vs. ExPASy TrEMBL
Match: A0A5A7TSW1 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00240 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.0e-06
Identity = 42/92 (45.65%), Postives = 55/92 (59.78%), Query Frame = 0


Query: 82  NLLIMYRITFDRLMPNQN-------NFVRDVQHFSVEQNIPQLGSMCEQYVTNITDIIQQ 141
           N  + YR    R +  +        +FV +VQ FSVE +I  LG +C++    +  IIQQ
Sbjct: 406 NYFVWYRSITRRFITQEGAFYHCMYDFVDEVQTFSVEHDIEALGQICDRTTERVDHIIQQ 465

Query: 142 TRRLTVADTDRTRARRRRRRQQAADIPQQNED 167
           TRRLTVADTDR R RRRRRR Q  D+ + +ED
Sbjct: 466 TRRLTVADTDRRRMRRRRRR-QGDDVVEGDED 496

The following BLAST results are available for this feature:

BLAST of Spg036924 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902435.1	4.9e-08	54.93	PREDICTED: serine/threonine-protein phosphatase 7 long form homolog isoform X1 [...	[more]
XP_008459571.1	4.9e-08	54.93	PREDICTED: serine/threonine-protein phosphatase 7 long form homolog isoform X2 [...	[more]
TYK16735.1	1.6e-06	43.40	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
KAA0043956.1	1.6e-06	45.65	serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi...	[more]
TYK03303.1	2.1e-06	45.65	serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi...	[more]

BLAST of Spg036924 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg036924 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E383	2.4e-08	54.93	serine/threonine-protein phosphatase 7 long form homolog isoform X1 OS=Cucumis m...	[more]
A0A1S3CBQ7	2.4e-08	54.93	serine/threonine-protein phosphatase 7 long form homolog isoform X2 OS=Cucumis m...	[more]
A0A5A7TPE7	7.7e-07	45.65	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]
A0A5D3CZ03	7.7e-07	43.40	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5A7TSW1	1.0e-06	45.65	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]

BLAST of Spg036924 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg036924.1	Spg036924.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048507	meristem development