Spg036888 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg036888
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	scaffold5: 48148995 .. 48151369 (+)
RNA-Seq Expression	Spg036888
Synteny	Spg036888

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACTGTCATGACACAGGCTTCAGTCGCCGTCTTTAGGCCATGCGCGTCAAGAACGAGGTTCCTTTCGGGTTCGTCGGAAAAGTTTAACAGAGCTTTGTCTGTTAAGCCAACAACTTCTTCAATTCCCAGTTCTTTCAAAGTTGAGGCCAAGAAAGGAGAGTGGTTACCAGGTTTGCCATCCCCAGCTTACCTTGATGGCAGGTACTGATCAAATCAAACACAAAAGATCTAGAAATTGAGATTTGTATTTAACAAACTTAAAAACTTCTCTATTTGCAGTCTTCCAGGTGATAACGGATTTGATCCTCTAGGACTTGCAGAGGACCCTGAGAACTTGAAGTGGTATGTGCAAGCAGAGCTTGTGAATGGTCGGTGGGCGATGCTCGGAGTTGCAGGTATGCTATTGCCTGAAGTCTTCACAAGTTTTGGAATCATCAACGTACCGAAATGGTACGATGCTGGGAAAGCCGAGTATTTCGCATCATCGTCAACTCTCTTTGTGATCGAGTTCATTCTGTTCCACTATGTGGAAATCAGAAGATGGCAAGACATAAAGAACCCAGGAAGTGTAAACCAAGATCCCATTTTCAAACAATACAGCTTGCCACCAAATGATGTTGGATATCCAGGGGGAATTTTCAACCCACTCAACTTTGAACCAACTCTTGAGGCCAAGGAAAAGGAGATTGCTAATGGTAAATGTCTCAGAAACAAACCAGCTAATCAAATTGCTCAATTACATGTATAATGATGAAACTAATCAAGTTTTGATCATCTGCAGGGAGATTGGCAATGTTGGCATTCTTGGGATTCATTGTTCAACACAATGTGACAGGAAAAGGTCCATTTGACAACTTCTTGCAGCACATTTCAGACCCATGGCACAACACCATTATCCAAACACTAAGGGGATAAGATAATGAAATCTGTGCAAGAATATGTGAACTGTGTGATTGTAGACATGGGAACTATCAGTGTACAGAATGGTGACAGTCATATGAATCTAGTATAAGTATGCAACTTGGTTTAACTGAGCAAGAAAGATTGTTATCACGCCGAATTCTTTAATTTTCTCGAAACTTGATATAAAAAAAAAAATATGAAATTTGCTTCCATGTTTTACAATAGCTCAATGTACAGCTAAGGAAACCAGAAAACCCAAATATGTTACAGCTCTTCCATGAGGAGGACAAAAAAAAAAAAGAAAATCTAATCTAAAAACCAACCTCTGATCTCGTATATCTTGTATTTACAAGTCGAGGATGTTGGTTAAACGGCAAAACGAGAAGCAGAAGATCATTCTGATCTCAATATATATCGAATAATTTCGTCTGGAAATTGGGAGAAGGATGCTATTCCAACAAAAAAGTTGACTGCATCTATCAAGAGGAACAATTCTTCAATCTGTTACCCCTCCAATCACTGGTGAAATTTGATAGGAATCAATTTGGTTGCTGCAAGAGATGATGAAATAATTAACGAACTGAAATAACAAAATGAGATCTCAGATCAAAATATAGTAGAAACGAGATGAGAAAAAACATCGACCATTCTGTATCGCAATAATAGAGGCTAAGGAAATGAAAACTATGTACGATGTGCTAGATAAGAAGATAAGGCAAGTGAATCCCACCCAAAACTTTGGAGCTGCAAAGTTTGAGGTCATCAAACAAGACAGGGGGCATGTAATATGCATGGTTTTGGTGCAGCGGCATACAAATAGCTTTGTATTAATTTTACATAGATACTAAATTAATGTTTTAACACAACTTTAAAGTTTTCAAAATACAAACATGGACAAAAAGTCCAATAAATGCAAATGGACTACATCAAGTTTTAGAGGAACCAGTTAAAAGAGAACCTACATGGTGGTACGCATTGCTTTGGAACATTGGAATGCTACAAGGCCCTGGTATAGAAGTCCAAGGATGCTGGTCGTCATCGTATAAAGCTCTAGAGAGCTCCAACTTGCCATTAAGTTGATTCTCGACGCAATTTGCATGCAAGTTCATCTCCATCTCAAGATTCAGTCTCTTTTCATCTTGGAAGTTGGAACCATCACATGTAGGGTGGTATGGATATTGCTCACCAAGTTGCAGCGTTGAGCAAGAAGTTCCACTTAATTCATTTAAAGCCCCATCACCTTGTGGCATGCTATCAACTTGACCAGAGATTCCAGCTTCAATTTGCTTCCCAGAGTTGAAGTAACTAGGAAAGCTTGGAAACGATGTGGCCATGGAGCATTCAACATCACTGCAGACATTCCCCATTATAAATTCAAGGGTACATAATCACCCACACAGACAGAAATCTCATACAGCAATTTTCAGATTTTCAACAGAAAACTATTTTATCTCATCACCCGATACC

mRNA sequence

ATGGCAACTGTCATGACACAGGCTTCAGTCGCCGTCTTTAGGCCATGCGCGTCAAGAACGAGGTTCCTTTCGGGTTCGTCGGAAAAGTTTAACAGAGCTTTGTCTGTTAAGCCAACAACTTCTTCAATTCCCAGTTCTTTCAAAGTTGAGGCCAAGAAAGGAGAGTGGTTACCAGGTTTGCCATCCCCAGCTTACCTTGATGGCAGTCTTCCAGGTGATAACGGATTTGATCCTCTAGGACTTGCAGAGGACCCTGAGAACTTGAAGTGGTATGTGCAAGCAGAGCTTGTGAATGGTCGGTGGGCGATGCTCGGAGTTGCAGGTATGCTATTGCCTGAAGTCTTCACAAGTTTTGGAATCATCAACGTACCGAAATGGTACGATGCTGGGAAAGCCGAGTATTTCGCATCATCGTCAACTCTCTTTGTGATCGAGTTCATTCTGTTCCACTATGTGGAAATCAGAAGATGGCAAGACATAAAGAACCCAGGAAGTGTAAACCAAGATCCCATTTTCAAACAATACAGCTTGCCACCAAATGATGTTGGATATCCAGGGGGAATTTTCAACCCACTCAACTTTGAACCAACTCTTGAGGCCAAGGAAAAGGAGATTGCTAATGGGAGATTGGCAATGTTGGCATTCTTGGGATTCATTGTTCAACACAATGTGACAGGAAAAGGTCCATTTGACAACTTCTTGCAGCACATTTCAGACCCATGGCACAACACCATTATCCAAACACTAAGGGGATAA

Coding sequence (CDS)

ATGGCAACTGTCATGACACAGGCTTCAGTCGCCGTCTTTAGGCCATGCGCGTCAAGAACGAGGTTCCTTTCGGGTTCGTCGGAAAAGTTTAACAGAGCTTTGTCTGTTAAGCCAACAACTTCTTCAATTCCCAGTTCTTTCAAAGTTGAGGCCAAGAAAGGAGAGTGGTTACCAGGTTTGCCATCCCCAGCTTACCTTGATGGCAGTCTTCCAGGTGATAACGGATTTGATCCTCTAGGACTTGCAGAGGACCCTGAGAACTTGAAGTGGTATGTGCAAGCAGAGCTTGTGAATGGTCGGTGGGCGATGCTCGGAGTTGCAGGTATGCTATTGCCTGAAGTCTTCACAAGTTTTGGAATCATCAACGTACCGAAATGGTACGATGCTGGGAAAGCCGAGTATTTCGCATCATCGTCAACTCTCTTTGTGATCGAGTTCATTCTGTTCCACTATGTGGAAATCAGAAGATGGCAAGACATAAAGAACCCAGGAAGTGTAAACCAAGATCCCATTTTCAAACAATACAGCTTGCCACCAAATGATGTTGGATATCCAGGGGGAATTTTCAACCCACTCAACTTTGAACCAACTCTTGAGGCCAAGGAAAAGGAGATTGCTAATGGGAGATTGGCAATGTTGGCATTCTTGGGATTCATTGTTCAACACAATGTGACAGGAAAAGGTCCATTTGACAACTTCTTGCAGCACATTTCAGACCCATGGCACAACACCATTATCCAAACACTAAGGGGATAA

Protein sequence

MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTLRG

Homology

[Close]

BLAST of Spg036888 vs. NCBI nr
Match: XP_038894825.1 (chlorophyll a-b binding protein P4, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 503.8 bits (1296), Expect = 8.4e-139
Identity = 238/251 (94.82%), Postives = 245/251 (97.61%), Query Frame = 0


Query: 1   MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGL 60
           MATVMTQAS +VFRPC  R+RFLS +S KFNR LSVKPTTSS+P+SFKVEAKKGEWLPGL
Sbjct: 1   MATVMTQASASVFRPCTLRSRFLSRTSGKFNRGLSVKPTTSSVPNSFKVEAKKGEWLPGL 60

Query: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEVFTSFGI 120
           PSPAYLDGSLPGDNGFDPLGLAEDPENL+WYVQAELVNGRWAMLGVAGMLLPEVFTSFGI
Sbjct: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSFGI 120

Query: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN
Sbjct: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDP 240
           DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDP
Sbjct: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDP 240

Query: 241 WHNTIIQTLRG 252
           WHNTI+QTLRG
Sbjct: 241 WHNTIVQTLRG 251

[Close]

BLAST of Spg036888 vs. NCBI nr
Match: XP_023524863.1 (chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 503.1 bits (1294), Expect = 1.4e-138
Identity = 238/251 (94.82%), Postives = 245/251 (97.61%), Query Frame = 0


Query: 1   MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGL 60
           M+ VM QAS AVFRP ASR+RFLSGSS KFNRALSVKPTTSS+PSSFKVEAKKGEWLPGL
Sbjct: 1   MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSSVPSSFKVEAKKGEWLPGL 60

Query: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEVFTSFGI 120
           PSP YLDGSLPGDNGFDPLGLAEDPENL+WYVQAELVNGRWAMLGVAGMLLPEVFTS+GI
Sbjct: 61  PSPVYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGI 120

Query: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN
Sbjct: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDP 240
           DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFI+QHNVTGKGPFDNFLQHISDP
Sbjct: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDP 240

Query: 241 WHNTIIQTLRG 252
           WHNTI+QTLRG
Sbjct: 241 WHNTIVQTLRG 251

[Close]

BLAST of Spg036888 vs. NCBI nr
Match: XP_022137160.1 (chlorophyll a-b binding protein P4, chloroplastic-like [Momordica charantia])

HSP 1 Score: 500.4 bits (1287), Expect = 9.3e-138
Identity = 239/251 (95.22%), Postives = 242/251 (96.41%), Query Frame = 0


Query: 1   MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGL 60
           MAT MTQAS AVFRPCASR+RFLSGSS KFNRALSVKPT SS+P  FKVEAKKGEWLPGL
Sbjct: 1   MATAMTQASAAVFRPCASRSRFLSGSSGKFNRALSVKPTASSLPCYFKVEAKKGEWLPGL 60

Query: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEVFTSFGI 120
           PSPAYLDGSL GDNGFDPLGLAEDPENL+WYVQAELVNGRWAMLGVAGMLLPEVFTS GI
Sbjct: 61  PSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSIGI 120

Query: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFK YSLPPN
Sbjct: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKXYSLPPN 180

Query: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDP 240
           DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDP
Sbjct: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDP 240

Query: 241 WHNTIIQTLRG 252
           WHNTIIQTLRG
Sbjct: 241 WHNTIIQTLRG 251

[Close]

BLAST of Spg036888 vs. NCBI nr
Match: XP_022949090.1 (chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 500.0 bits (1286), Expect = 1.2e-137
Identity = 237/251 (94.42%), Postives = 244/251 (97.21%), Query Frame = 0


Query: 1   MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGL 60
           M+ VM QAS AVFRP ASR+RFL GSS KFNRALSVKPTTS +PSSFKVEAKKGEWLPGL
Sbjct: 1   MSIVMIQASAAVFRPSASRSRFLLGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGL 60

Query: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEVFTSFGI 120
           PSPAYLDGSLPGDNGFDPLGLAEDPENL+WYVQAELVNGRWAMLGVAGMLLPEVFTS+GI
Sbjct: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGI 120

Query: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN
Sbjct: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDP 240
           DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFI+QHNVTGKGPFDNFLQHISDP
Sbjct: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDP 240

Query: 241 WHNTIIQTLRG 252
           WHNTI+QTLRG
Sbjct: 241 WHNTIVQTLRG 251

[Close]

BLAST of Spg036888 vs. NCBI nr
Match: XP_022998805.1 (chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 499.6 bits (1285), Expect = 1.6e-137
Identity = 237/251 (94.42%), Postives = 244/251 (97.21%), Query Frame = 0


Query: 1   MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGL 60
           M+ VM QAS AVFRP ASR+RFLSGSS KFNRALSVKPTTS +PSSFKVEAKKGEWLPGL
Sbjct: 1   MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGL 60

Query: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEVFTSFGI 120
           PSPAYLDGSLPGDNGFDPLGLAEDPENL+WYVQAELVNGRWAMLGVAGMLLPEVFTS GI
Sbjct: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSNGI 120

Query: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN
Sbjct: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDP 240
           DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFI+QHNVTGKGPFDNFLQHISDP
Sbjct: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDP 240

Query: 241 WHNTIIQTLRG 252
           WHNT++QTLRG
Sbjct: 241 WHNTVVQTLRG 251

[Close]

BLAST of Spg036888 vs. ExPASy Swiss-Prot
Match: Q9SQL2 (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum OX=3888 GN=lhcA-P4 PE=1 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 9.4e-125
Identity = 212/251 (84.46%), Postives = 224/251 (89.24%), Query Frame = 0


Query: 1   MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGL 60
           MATV TQAS A+F PC  ++RFL GSS K NR ++ +P   S  +SFKVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAIFGPCGLKSRFLGGSSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGL 60

Query: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEVFTSFGI 120
            SP YL GSLPGDNGFDPLGLAEDPENL+W+VQAELVNGRWAMLGVAGMLLPEVFTS GI
Sbjct: 61  ASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGI 120

Query: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INVPKWY AGK EYFASSSTLFVIEFIL HYVEIRRWQDIKNPGSVNQDPIFKQYSLP  
Sbjct: 121 INVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAG 180

Query: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDP 240
           +VGYPGGIFNPLNF PTLEAKEKEIANGRLAMLAFLGFI+QHNVTGKGPFDN LQHISDP
Sbjct: 181 EVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHISDP 240

Query: 241 WHNTIIQTLRG 252
           WHNTI+QTL G
Sbjct: 241 WHNTIVQTLGG 251

[Close]

BLAST of Spg036888 vs. ExPASy Swiss-Prot
Match: P27521 (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA4 PE=1 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 8.2e-121
Identity = 207/249 (83.13%), Postives = 221/249 (88.76%), Query Frame = 0


Query: 1   MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSI-PSSFKVEAKKGEWLPG 60
           MATV T AS ++FRPC S+ RFL+GSS + NR LS     SS   SSFKVEAKKGEWLPG
Sbjct: 1   MATVTTHASASIFRPCTSKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPG 60

Query: 61  LPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEVFTSFG 120
           L SP YL GSL GDNGFDPLGLAEDPENLKW+VQAELVNGRWAMLGVAGMLLPEVFT  G
Sbjct: 61  LASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIG 120

Query: 121 IINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPP 180
           IINVP+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP 
Sbjct: 121 IINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPK 180

Query: 181 NDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISD 240
            +VGYPGGIFNPLNF PT EAKEKE+ANGRLAMLAFLGF+VQHNVTGKGPF+N LQH+SD
Sbjct: 181 GEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSD 240

Query: 241 PWHNTIIQT 249
           PWHNTI+QT
Sbjct: 241 PWHNTIVQT 249

[Close]

BLAST of Spg036888 vs. ExPASy Swiss-Prot
Match: Q36718 (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare OX=4513 GN=LHC Ib-20 PE=1 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.3e-86
Identity = 153/227 (67.40%), Postives = 177/227 (77.97%), Query Frame = 0


Query: 29  KFNRALSVKPTTSSIPSSFKVEA---KKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDP 88
           +F   +   P  S  P S + +     KG WLPGL SPAYLDGSL GDNGFDPL LAEDP
Sbjct: 6   RFRTRVPPSPAASGSPRSTRRDVAVQAKGSWLPGLQSPAYLDGSLEGDNGFDPLALAEDP 65

Query: 89  ENLKWYVQAELVNGRWAMLGVAGMLLPEVFTSFGIINVPKWYD-AGKAEYFASSSTLFVI 148
           E+L+W+VQA++VNGRWAMLGVAGML+PEV T  G++N P+W    GK  YFASSST   +
Sbjct: 66  EDLRWFVQADVVNGRWAMLGVAGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRV 125

Query: 149 EFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKE 208
             +   YVEIRRWQDIKNPGSVNQDPIFK YSLPP++ GYPG +FNPLNF P LE KEKE
Sbjct: 126 H-MSSTYVEIRRWQDIKNPGSVNQDPIFKSYSLPPHECGYPGRVFNPLNFAP-LENKEKE 185

Query: 209 IANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTLRG 252
           +ANGRLAMLAFLGF+VQHNV GKGPF+N  QH++DPWHNTIIQT+ G
Sbjct: 186 LANGRLAMLAFLGFLVQHNVHGKGPFENLQQHLADPWHNTIIQTISG 230

[Close]

BLAST of Spg036888 vs. ExPASy Swiss-Prot
Match: P13869 (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.9e-61
Identity = 116/235 (49.36%), Postives = 146/235 (62.13%), Query Frame = 0


Query: 17  ASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGF 76
           A++  FL G   + ++ ++   + S   S+   +  +  W PG   P +LDGSLPGD GF
Sbjct: 29  ATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGF 88

Query: 77  DPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFA 136
           DPLGL  DPE+LKW  QAELV+ RWAMLG AG+ +PE  T  G++N P WY AG+ EYF 
Sbjct: 89  DPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFT 148

Query: 137 SSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF- 196
            ++TLFVIE +L  + E RRW DI  PG VN DPIF    L   DVGYPGG+ F+PL + 
Sbjct: 149 DTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWG 208

Query: 197 ----EPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTI 246
                   E + KEI NGRLAMLA +G   QH  TG GP DN   H++DP H TI
Sbjct: 209 SGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATI 263

[Close]

BLAST of Spg036888 vs. ExPASy Swiss-Prot
Match: Q9SYW8 (Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA2 PE=1 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 3.3e-61
Identity = 120/237 (50.63%), Postives = 147/237 (62.03%), Query Frame = 0


Query: 18  SRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGE---WLPGLPSPAYLDGSLPGDN 77
           S   FL G   +  + L+V P  S   +S +  A   +   W PG   P +LDGSLPGD 
Sbjct: 15  SSPSFLGGKKLRLKKKLTV-PAVSRPDASVRAVAADPDRPIWFPGSTPPEWLDGSLPGDF 74

Query: 78  GFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEY 137
           GFDPLGL+ DP++LKW VQAE+V+ RWAMLG AG+ +PE  T  GI+N P WY AG+ EY
Sbjct: 75  GFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEY 134

Query: 138 FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLN 197
           F   +TLFV+E IL  + E RRW DI  PGSVN DP+F    L   DVGYPGG+ F+PL 
Sbjct: 135 FTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDPVFPNNKLTGTDVGYPGGLWFDPLG 194

Query: 198 F-----EPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTI 246
           +         E + KEI NGRLAMLA +G   QH  TG GP DN   H++DP H TI
Sbjct: 195 WGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATI 250

[Close]

BLAST of Spg036888 vs. ExPASy TrEMBL
Match: A0A6J1C5V9 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111008702 PE=3 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 4.5e-138
Identity = 239/251 (95.22%), Postives = 242/251 (96.41%), Query Frame = 0


Query: 1   MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGL 60
           MAT MTQAS AVFRPCASR+RFLSGSS KFNRALSVKPT SS+P  FKVEAKKGEWLPGL
Sbjct: 1   MATAMTQASAAVFRPCASRSRFLSGSSGKFNRALSVKPTASSLPCYFKVEAKKGEWLPGL 60

Query: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEVFTSFGI 120
           PSPAYLDGSL GDNGFDPLGLAEDPENL+WYVQAELVNGRWAMLGVAGMLLPEVFTS GI
Sbjct: 61  PSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSIGI 120

Query: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFK YSLPPN
Sbjct: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKXYSLPPN 180

Query: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDP 240
           DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDP
Sbjct: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDP 240

Query: 241 WHNTIIQTLRG 252
           WHNTIIQTLRG
Sbjct: 241 WHNTIIQTLRG 251

[Close]

BLAST of Spg036888 vs. ExPASy TrEMBL
Match: A0A6J1GBT1 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452545 PE=3 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 5.9e-138
Identity = 237/251 (94.42%), Postives = 244/251 (97.21%), Query Frame = 0


Query: 1   MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGL 60
           M+ VM QAS AVFRP ASR+RFL GSS KFNRALSVKPTTS +PSSFKVEAKKGEWLPGL
Sbjct: 1   MSIVMIQASAAVFRPSASRSRFLLGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGL 60

Query: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEVFTSFGI 120
           PSPAYLDGSLPGDNGFDPLGLAEDPENL+WYVQAELVNGRWAMLGVAGMLLPEVFTS+GI
Sbjct: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGI 120

Query: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN
Sbjct: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDP 240
           DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFI+QHNVTGKGPFDNFLQHISDP
Sbjct: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDP 240

Query: 241 WHNTIIQTLRG 252
           WHNTI+QTLRG
Sbjct: 241 WHNTIVQTLRG 251

[Close]

BLAST of Spg036888 vs. ExPASy TrEMBL
Match: A0A6J1KDI3 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493358 PE=3 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 7.7e-138
Identity = 237/251 (94.42%), Postives = 244/251 (97.21%), Query Frame = 0


Query: 1   MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGL 60
           M+ VM QAS AVFRP ASR+RFLSGSS KFNRALSVKPTTS +PSSFKVEAKKGEWLPGL
Sbjct: 1   MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGL 60

Query: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEVFTSFGI 120
           PSPAYLDGSLPGDNGFDPLGLAEDPENL+WYVQAELVNGRWAMLGVAGMLLPEVFTS GI
Sbjct: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSNGI 120

Query: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN
Sbjct: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDP 240
           DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFI+QHNVTGKGPFDNFLQHISDP
Sbjct: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDP 240

Query: 241 WHNTIIQTLRG 252
           WHNT++QTLRG
Sbjct: 241 WHNTVVQTLRG 251

[Close]

BLAST of Spg036888 vs. ExPASy TrEMBL
Match: A0A0A0LTE5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_1G033310 PE=3 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 2.9e-137
Identity = 233/250 (93.20%), Postives = 244/250 (97.60%), Query Frame = 0


Query: 1   MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGL 60
           MATV+TQAS  VFRPCASR+RFLSGSS KFNRALSVKPTTSSIP++FKVEAKKGEWLPGL
Sbjct: 1   MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGL 60

Query: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEVFTSFGI 120
           PSP YLDGSLPGDNGFDPLGLAEDPENL+WY QAELVNGRWAMLGVAGM+LPEV T++GI
Sbjct: 61  PSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGRWAMLGVAGMVLPEVLTNYGI 120

Query: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN
Sbjct: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDP 240
           DVGYPGGIFNPLNFEPTLEA+EKEIANGRLAMLAFLGFIVQHNVTGKGPFDNF+QHISDP
Sbjct: 181 DVGYPGGIFNPLNFEPTLEAREKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFMQHISDP 240

Query: 241 WHNTIIQTLR 251
           WHNTI+QTLR
Sbjct: 241 WHNTIVQTLR 250

[Close]

BLAST of Spg036888 vs. ExPASy TrEMBL
Match: A0A2C9VP65 (Chlorophyll a-b binding protein, chloroplastic OS=Manihot esculenta OX=3983 GN=MANES_06G091400 PE=3 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 1.1e-131
Identity = 223/251 (88.84%), Postives = 238/251 (94.82%), Query Frame = 0


Query: 1   MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGL 60
           MATV+TQAS AVFRPCASR+RFL+GSS K NR +S+KP  SS  +SFKVEAKKGEWLPGL
Sbjct: 1   MATVITQASAAVFRPCASRSRFLTGSSSKLNREVSLKPMLSSPAASFKVEAKKGEWLPGL 60

Query: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEVFTSFGI 120
           PSPAYL+GSLPGDNGFDPLGLAEDPENLKWY+QAELVNGRWAMLGVAGMLLPEVFT  G+
Sbjct: 61  PSPAYLNGSLPGDNGFDPLGLAEDPENLKWYIQAELVNGRWAMLGVAGMLLPEVFTKIGV 120

Query: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INVP+WYDAGK EYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN
Sbjct: 121 INVPQWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDP 240
           +VGYPGGIFNPLNF PTLEAKEKE+ANGRLAMLAFLGF+VQHNVTGKGPFDN LQH+SDP
Sbjct: 181 EVGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFDNLLQHLSDP 240

Query: 241 WHNTIIQTLRG 252
           WHNTI+QTLRG
Sbjct: 241 WHNTIVQTLRG 251

[Close]

BLAST of Spg036888 vs. TAIR 10
Match: AT3G47470.1 (light-harvesting chlorophyll-protein complex I subunit A4 )

HSP 1 Score: 434.5 bits (1116), Expect = 5.8e-122
Identity = 207/249 (83.13%), Postives = 221/249 (88.76%), Query Frame = 0


Query: 1   MATVMTQASVAVFRPCASRTRFLSGSSEKFNRALSVKPTTSSI-PSSFKVEAKKGEWLPG 60
           MATV T AS ++FRPC S+ RFL+GSS + NR LS     SS   SSFKVEAKKGEWLPG
Sbjct: 1   MATVTTHASASIFRPCTSKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPG 60

Query: 61  LPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEVFTSFG 120
           L SP YL GSL GDNGFDPLGLAEDPENLKW+VQAELVNGRWAMLGVAGMLLPEVFT  G
Sbjct: 61  LASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIG 120

Query: 121 IINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPP 180
           IINVP+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP 
Sbjct: 121 IINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPK 180

Query: 181 NDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISD 240
            +VGYPGGIFNPLNF PT EAKEKE+ANGRLAMLAFLGF+VQHNVTGKGPF+N LQH+SD
Sbjct: 181 GEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSD 240

Query: 241 PWHNTIIQT 249
           PWHNTI+QT
Sbjct: 241 PWHNTIVQT 249

[Close]

BLAST of Spg036888 vs. TAIR 10
Match: AT3G61470.1 (photosystem I light harvesting complex gene 2 )

HSP 1 Score: 236.5 bits (602), Expect = 2.3e-62
Identity = 120/237 (50.63%), Postives = 147/237 (62.03%), Query Frame = 0


Query: 18  SRTRFLSGSSEKFNRALSVKPTTSSIPSSFKVEAKKGE---WLPGLPSPAYLDGSLPGDN 77
           S   FL G   +  + L+V P  S   +S +  A   +   W PG   P +LDGSLPGD 
Sbjct: 15  SSPSFLGGKKLRLKKKLTV-PAVSRPDASVRAVAADPDRPIWFPGSTPPEWLDGSLPGDF 74

Query: 78  GFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEY 137
           GFDPLGL+ DP++LKW VQAE+V+ RWAMLG AG+ +PE  T  GI+N P WY AG+ EY
Sbjct: 75  GFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEY 134

Query: 138 FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLN 197
           F   +TLFV+E IL  + E RRW DI  PGSVN DP+F    L   DVGYPGG+ F+PL 
Sbjct: 135 FTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDPVFPNNKLTGTDVGYPGGLWFDPLG 194

Query: 198 F-----EPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTI 246
           +         E + KEI NGRLAMLA +G   QH  TG GP DN   H++DP H TI
Sbjct: 195 WGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATI 250

[Close]

BLAST of Spg036888 vs. TAIR 10
Match: AT1G45474.1 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 222.2 bits (565), Expect = 4.5e-58
Identity = 117/233 (50.21%), Postives = 153/233 (65.67%), Query Frame = 0


Query: 26  SSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDP 85
           SS    R  SVK     I  +  VE  +  WLPGL  P YLDG+L GD GFDPLGL EDP
Sbjct: 21  SSVITRRISSVKAAGGGINPTVAVE--RATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDP 80

Query: 86  ENLKWYVQAELVNGRWAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEY-FASSSTLFVI 145
           E+LKWYVQAELV+ R+AMLGVAG+L  ++  + GI N+P WY+AG  ++ FAS+ TL V+
Sbjct: 81  ESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVV 140

Query: 146 EFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNDVGYPGG-IFNPLNFEPTLEA 205
           +F+L  + E +R+ D  +PGS  ++  F    + +L   + GYPGG + NPL     ++ 
Sbjct: 141 QFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEAALEGLEPGYPGGPLLNPLGLAKDVQN 200

Query: 206 ----KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTL 250
               K KEI NGRLAM+A LGF VQ +VT  GP DN ++H+S+PWH TIIQTL
Sbjct: 201 AHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNPWHKTIIQTL 251

[Close]

BLAST of Spg036888 vs. TAIR 10
Match: AT1G45474.2 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 222.2 bits (565), Expect = 4.5e-58
Identity = 117/233 (50.21%), Postives = 153/233 (65.67%), Query Frame = 0


Query: 26  SSEKFNRALSVKPTTSSIPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDP 85
           SS    R  SVK     I  +  VE  +  WLPGL  P YLDG+L GD GFDPLGL EDP
Sbjct: 21  SSVITRRISSVKAAGGGINPTVAVE--RATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDP 80

Query: 86  ENLKWYVQAELVNGRWAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEY-FASSSTLFVI 145
           E+LKWYVQAELV+ R+AMLGVAG+L  ++  + GI N+P WY+AG  ++ FAS+ TL V+
Sbjct: 81  ESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVV 140

Query: 146 EFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNDVGYPGG-IFNPLNFEPTLEA 205
           +F+L  + E +R+ D  +PGS  ++  F    + +L   + GYPGG + NPL     ++ 
Sbjct: 141 QFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEAALEGLEPGYPGGPLLNPLGLAKDVQN 200

Query: 206 ----KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIIQTL 250
               K KEI NGRLAM+A LGF VQ +VT  GP DN ++H+S+PWH TIIQTL
Sbjct: 201 AHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNPWHKTIIQTL 251

[Close]

BLAST of Spg036888 vs. TAIR 10
Match: AT1G19150.1 (photosystem I light harvesting complex gene 6 )

HSP 1 Score: 211.5 bits (537), Expect = 8.0e-55
Identity = 97/193 (50.26%), Postives = 122/193 (63.21%), Query Frame = 0


Query: 56  WLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNGRWAMLGVAGMLLPEVF 115
           W PG   P +LDGSLPGD GFDPLGL  DP+ LKW+ QAEL++ RWAML V G+++PE  
Sbjct: 68  WFPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLAVTGIIIPECL 127

Query: 116 TSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQY 175
              G I    WYDAG  EYFA S+TLFV + +L  + E RRW D+  PGSV+ +P +   
Sbjct: 128 ERLGFIENFSWYDAGSREYFADSTTLFVAQMVLMGWAEGRRWADLIKPGSVDIEPKYPHK 187

Query: 176 SLPPNDVGYPGGIFNPLNF------EPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGP 235
             P  DVGYPGG++           EP +  + KEI NGRLAMLAFLGF  Q   T + P
Sbjct: 188 VNPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIKNGRLAMLAFLGFCFQATYTSQDP 247

Query: 236 FDNFLQHISDPWH 243
            +N + H++DP H
Sbjct: 248 IENLMAHLADPGH 260

The following BLAST results are available for this feature:

BLAST of Spg036888 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894825.1	8.4e-139	94.82	chlorophyll a-b binding protein P4, chloroplastic-like [Benincasa hispida]	[more]
XP_023524863.1	1.4e-138	94.82	chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita pepo subsp. pe...	[more]
XP_022137160.1	9.3e-138	95.22	chlorophyll a-b binding protein P4, chloroplastic-like [Momordica charantia]	[more]
XP_022949090.1	1.2e-137	94.42	chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita moschata]	[more]
XP_022998805.1	1.6e-137	94.42	chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of Spg036888 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SQL2	9.4e-125	84.46	Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum OX=3888 GN=lh...	[more]
P27521	8.2e-121	83.13	Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q36718	1.3e-86	67.40	Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulga...	[more]
P13869	1.9e-61	49.36	Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 S...	[more]
Q9SYW8	3.3e-61	50.63	Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis th...	[more]

BLAST of Spg036888 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C5V9	4.5e-138	95.22	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1GBT1	5.9e-138	94.42	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1KDI3	7.7e-138	94.42	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A0A0LTE5	2.9e-137	93.20	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A2C9VP65	1.1e-131	88.84	Chlorophyll a-b binding protein, chloroplastic OS=Manihot esculenta OX=3983 GN=M...	[more]

BLAST of Spg036888 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47470.1	5.8e-122	83.13	light-harvesting chlorophyll-protein complex I subunit A4	[more]
AT3G61470.1	2.3e-62	50.63	photosystem I light harvesting complex gene 2	[more]
AT1G45474.1	4.5e-58	50.21	photosystem I light harvesting complex gene 5	[more]
AT1G45474.2	4.5e-58	50.21	photosystem I light harvesting complex gene 5	[more]
AT1G19150.1	8.0e-55	50.26	photosystem I light harvesting complex gene 6	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 63..242 e-value: 1.2E-67 score: 229.5
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 63..222 e-value: 8.0E-50 score: 169.5
None	No IPR available	PANTHER	PTHR21649:SF109	CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC	coord: 1..251
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 53..249
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..251

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg036888.1	Spg036888.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009409	response to cold
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0009645	response to low light intensity stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0019904	protein domain specific binding