Spg036883 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCACAGTCCCAGTCACTTGCCGGTGCAGCACACCAACACGCCGGAGCAGCGGCCAATCAAACGCCACCACACGGCGCGCTACTACGCGCACCGCGTCAAGGAGAGCCTCACCACGCGCTTGTCAAAGCTCATATGCGCCATTTTCTTGAGCTTGTTGTTGATTGTGGGCGTCATAACGTTCATACTTTGGCTCAGTCTACGACCCCACCGGCCCAGGTTCTTCATCCACGATTTTTCGGTTCCGGGTTTGGGCTTGGATAACGGGTTCGAAAATGCCCAGATTGTGTTCAACGTCACGGCTCGAAATTCGAACCAGAACATTGGGATCTACTACGAGTCGATGTCCGGTGCGGTTTATTATAGGGACCAGAGGATTGGGTCGAGCCAGTTGCTGGATTCGTATTACGAGGGGCCGAAGACCACGAAGGTGCTGACGGCGGTGCTGAGCGGCGCGACGTTGAATGTCAACAACCAGCGGTGGATGGAATTTACTAATGACCGGTCCAAAGGGACCGTGGTTTTCCGGTTGGAGATTACGTCGACGATCCGGTTCAAGATATCCACGTGGGATAGTAAGCGCCACGGTATGCATGCTAATTGTGACGTGTCGGTGGGCCCCGATGGGACGATTTTGCCTTCTTCCAAGGATGTGAGATGCCCGGTCTATTTTACTTGATTTTAATAATATTTTTAGTGACCTAATTAACAATTTAATGCTTTTTCTTCCTTGTAATGTTTTTGATTAGGTTTGAATTTGGGTTTGTAAATTTGTTGGATTAATTGTTCGTGTGATCTTCTTATTGAGAATTTTAAAATGTAATTCAATTTCATCATTTTTATTCGTAAACTCATCTCTAAATTGAGTGAAAGTTCAGTCGAGAGGCGGTATATGTTCGTGATTGATGTAGTTTCATATTTTTACCATTCATAGAATGAAGTTAAAAGAAAAACTAGTATAACTACCACTAAATTACAAAAATATAAAAATGGTTACAATCACACTACTTTGAGTAATCACAACTCTAAAATTAGGAGTCATTAATGTCAAATACTATTTATTATAACTTTGTGTGGGTATAATTCCATGACAATCCCCATAGTCTAAGAGTAGTTCAAAGATTAGAATTTAGGGTTTTAATTACAATAACAAGTTCTTTTATCTCGCTAAATTGGATGACTTTTCTGTAATCCTTCTTTGTATATGTTTCTCACATACATCTTTAAATAAAGTATCCATTTTCTTAAAAAAGAATTATTTTTGTAGTTAGCGGGATTGAGATTATTACTTAACTCAAAGTTAAAGTGTTTTAAAAAAGCCCAAGTGGGAACATTTTCTTGGGAGTTTGAAGTAAGCAATCCCAACTCAATTTATTCCAAATAATGAATGACACAAAAGTTAAAACTTTACACCGAAGAAATCCCCTTTAAATGTCAGAGATGAAGCGCATATGATATGTAAAAAAAAAAAACAACACCCACAAACCATGTTCCTCCGAACAAGTAATAAAGCACAAAAAAGTTAACTAAAAGCTCCTCTTTCCAACCAACTCAAACACGACACCAAATTTGCTTACCTTTCTTCTTCACAAAGAAAATGCAACATTATCTATATATCATATCATCATCATTACCCTCTTTCTCAAACTCAAATTAATTCACACCCTCTCTAAAATGGCTGCCAAAAAATTATCCAAATGCGAGCTTTCTCTCTTCATATGGTTTCTACAAGTTGTAACAATTCTGTTATTTGCCTCTTTAGCCATATGGGCGAGTGTAACCCCCAAGACTCCAACTTTCACCATCTCCAATATGGATCTGAAGCCATATCAAAACGACAGCGCTCTTGCAAGAAGCTCCTCCTTAGCCTTGAATGTGACCATCTCAAATCCCAACAAAATGATTGGCATCTTCTTCGATGAGCTTAATGTGACAGTGCGTTGCAGAAACGAGAGTGTTGGGTCGAGGTCGCTCTCGGGGTTTTATTTGGGCCACAGGAGTGTCGATTCAGAAGTGGTTGCGTTGGCTGTGAATGCTAGCGATGGGTTGTGCTGGAAAGTGGAGACGAGTGTTGGATATAAGATTGTGTGGTTCAAGACGAAGCATCGAGGGTTGGTTTTTGAAGATTGTGTGCAGATTGGTCCTGATGGGCAAATGCTGGGAACAAGAGAAATGAAGTTGAGCTGA ATGCACAGTCCCAGTCACTTGCCGGTGCAGCACACCAACACGCCGGAGCAGCGGCCAATCAAACGCCACCACACGGCGCGCTACTACGCGCACCGCGTCAAGGAGAGCCTCACCACGCGCTTGTCAAAGCTCATATGCGCCATTTTCTTGAGCTTGTTGTTGATTGTGGGCGTCATAACGTTCATACTTTGGCTCAGTCTACGACCCCACCGGCCCAGGTTCTTCATCCACGATTTTTCGGTTCCGGGTTTGGGCTTGGATAACGGGTTCGAAAATGCCCAGATTGTGTTCAACGTCACGGCTCGAAATTCGAACCAGAACATTGGGATCTACTACGAGTCGATGTCCGGTGCGGTTTATTATAGGGACCAGAGGATTGGGTCGAGCCAGTTGCTGGATTCGTATTACGAGGGGCCGAAGACCACGAAGGTGCTGACGGCGGTGCTGAGCGGCGCGACGTTGAATGTCAACAACCAGCGGTGGATGGAATTTACTAATGACCGGTCCAAAGGGACCGTGGTTTTCCGGTTGGAGATTACGTCGACGATCCGGTTCAAGATATCCACGTGGGATAGTAAGCGCCACGCCATATGGGCGAGTGTAACCCCCAAGACTCCAACTTTCACCATCTCCAATATGGATCTGAAGCCATATCAAAACGACAGCGCTCTTGCAAGAAGCTCCTCCTTAGCCTTGAATGTGACCATCTCAAATCCCAACAAAATGATTGGCATCTTCTTCGATGAGCTTAATGTGACAGTGCGTTGCAGAAACGAGAGTGTTGGGTCGAGGTCGCTCTCGGGGTTTTATTTGGGCCACAGGAGTGTCGATTCAGAAGTGGTTGCGTTGGCTGTGAATGCTAGCGATGGGTTGTGCTGGAAAGTGGAGACGAGTGTTGGATATAAGATTGTGTGGTTCAAGACGAAGCATCGAGGGTTGGTTTTTGAAGATTGTGTGCAGATTGGTCCTGATGGGCAAATGCTGGGAACAAGAGAAATGAAGTTGAGCTGA ATGCACAGTCCCAGTCACTTGCCGGTGCAGCACACCAACACGCCGGAGCAGCGGCCAATCAAACGCCACCACACGGCGCGCTACTACGCGCACCGCGTCAAGGAGAGCCTCACCACGCGCTTGTCAAAGCTCATATGCGCCATTTTCTTGAGCTTGTTGTTGATTGTGGGCGTCATAACGTTCATACTTTGGCTCAGTCTACGACCCCACCGGCCCAGGTTCTTCATCCACGATTTTTCGGTTCCGGGTTTGGGCTTGGATAACGGGTTCGAAAATGCCCAGATTGTGTTCAACGTCACGGCTCGAAATTCGAACCAGAACATTGGGATCTACTACGAGTCGATGTCCGGTGCGGTTTATTATAGGGACCAGAGGATTGGGTCGAGCCAGTTGCTGGATTCGTATTACGAGGGGCCGAAGACCACGAAGGTGCTGACGGCGGTGCTGAGCGGCGCGACGTTGAATGTCAACAACCAGCGGTGGATGGAATTTACTAATGACCGGTCCAAAGGGACCGTGGTTTTCCGGTTGGAGATTACGTCGACGATCCGGTTCAAGATATCCACGTGGGATAGTAAGCGCCACGCCATATGGGCGAGTGTAACCCCCAAGACTCCAACTTTCACCATCTCCAATATGGATCTGAAGCCATATCAAAACGACAGCGCTCTTGCAAGAAGCTCCTCCTTAGCCTTGAATGTGACCATCTCAAATCCCAACAAAATGATTGGCATCTTCTTCGATGAGCTTAATGTGACAGTGCGTTGCAGAAACGAGAGTGTTGGGTCGAGGTCGCTCTCGGGGTTTTATTTGGGCCACAGGAGTGTCGATTCAGAAGTGGTTGCGTTGGCTGTGAATGCTAGCGATGGGTTGTGCTGGAAAGTGGAGACGAGTGTTGGATATAAGATTGTGTGGTTCAAGACGAAGCATCGAGGGTTGGTTTTTGAAGATTGTGTGCAGATTGGTCCTGATGGGCAAATGCTGGGAACAAGAGAAATGAAGTTGAGCTGA MHSPSHLPVQHTNTPEQRPIKRHHTARYYAHRVKESLTTRLSKLICAIFLSLLLIVGVITFILWLSLRPHRPRFFIHDFSVPGLGLDNGFENAQIVFNVTARNSNQNIGIYYESMSGAVYYRDQRIGSSQLLDSYYEGPKTTKVLTAVLSGATLNVNNQRWMEFTNDRSKGTVVFRLEITSTIRFKISTWDSKRHAIWASVTPKTPTFTISNMDLKPYQNDSALARSSSLALNVTISNPNKMIGIFFDELNVTVRCRNESVGSRSLSGFYLGHRSVDSEVVALAVNASDGLCWKVETSVGYKIVWFKTKHRGLVFEDCVQIGPDGQMLGTREMKLS Homology
BLAST of Spg036883 vs. NCBI nr
Match: XP_022955056.1 (NDR1/HIN1-like protein 26 [Cucurbita moschata] >XP_023542769.1 NDR1/HIN1-like protein 26 [Cucurbita pepo subsp. pepo] >KAG6573210.1 NDR1/HIN1-like protein 13, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012384.1 NDR1/HIN1-like protein 13, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 353.6 bits (906), Expect = 1.9e-93 Identity = 173/200 (86.50%), Postives = 185/200 (92.50%), Query Frame = 0
BLAST of Spg036883 vs. NCBI nr
Match: XP_023522985.1 (NDR1/HIN1-like protein 26, partial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 353.6 bits (906), Expect = 1.9e-93 Identity = 173/200 (86.50%), Postives = 185/200 (92.50%), Query Frame = 0
BLAST of Spg036883 vs. NCBI nr
Match: XP_022994264.1 (NDR1/HIN1-like protein 26 [Cucurbita maxima]) HSP 1 Score: 353.2 bits (905), Expect = 2.5e-93 Identity = 173/200 (86.50%), Postives = 186/200 (93.00%), Query Frame = 0
BLAST of Spg036883 vs. NCBI nr
Match: XP_016899097.1 (PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo] >KAA0056885.1 NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa] >TYJ99388.1 NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa]) HSP 1 Score: 337.0 bits (863), Expect = 1.8e-88 Identity = 166/203 (81.77%), Postives = 185/203 (91.13%), Query Frame = 0
BLAST of Spg036883 vs. NCBI nr
Match: XP_038895222.1 (NDR1/HIN1-like protein 26 [Benincasa hispida]) HSP 1 Score: 336.3 bits (861), Expect = 3.1e-88 Identity = 164/200 (82.00%), Postives = 181/200 (90.50%), Query Frame = 0
BLAST of Spg036883 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 3.6e-15 Identity = 51/155 (32.90%), Postives = 82/155 (52.90%), Query Frame = 0
BLAST of Spg036883 vs. ExPASy Swiss-Prot
Match: Q9ZVD2 (NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 6.9e-14 Identity = 54/152 (35.53%), Postives = 85/152 (55.92%), Query Frame = 0
BLAST of Spg036883 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.5e-13 Identity = 45/147 (30.61%), Postives = 75/147 (51.02%), Query Frame = 0
BLAST of Spg036883 vs. ExPASy Swiss-Prot
Match: O48915 (Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 6.4e-12 Identity = 59/203 (29.06%), Postives = 94/203 (46.31%), Query Frame = 0
BLAST of Spg036883 vs. ExPASy Swiss-Prot
Match: Q9SJ54 (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.7e-10 Identity = 36/146 (24.66%), Postives = 72/146 (49.32%), Query Frame = 0
BLAST of Spg036883 vs. ExPASy TrEMBL
Match: A0A6J1GSN4 (NDR1/HIN1-like protein 26 OS=Cucurbita moschata OX=3662 GN=LOC111457132 PE=4 SV=1) HSP 1 Score: 353.6 bits (906), Expect = 9.1e-94 Identity = 173/200 (86.50%), Postives = 185/200 (92.50%), Query Frame = 0
BLAST of Spg036883 vs. ExPASy TrEMBL
Match: A0A6J1K2E7 (NDR1/HIN1-like protein 26 OS=Cucurbita maxima OX=3661 GN=LOC111490050 PE=4 SV=1) HSP 1 Score: 353.2 bits (905), Expect = 1.2e-93 Identity = 173/200 (86.50%), Postives = 186/200 (93.00%), Query Frame = 0
BLAST of Spg036883 vs. ExPASy TrEMBL
Match: A0A5A7UTL7 (NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G006060 PE=4 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 8.8e-89 Identity = 166/203 (81.77%), Postives = 185/203 (91.13%), Query Frame = 0
BLAST of Spg036883 vs. ExPASy TrEMBL
Match: A0A1S4DSX4 (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103485613 PE=4 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 8.8e-89 Identity = 166/203 (81.77%), Postives = 185/203 (91.13%), Query Frame = 0
BLAST of Spg036883 vs. ExPASy TrEMBL
Match: A0A0A0LUA7 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G064760 PE=4 SV=1) HSP 1 Score: 331.3 bits (848), Expect = 4.8e-87 Identity = 162/203 (79.80%), Postives = 185/203 (91.13%), Query Frame = 0
BLAST of Spg036883 vs. TAIR 10
Match: AT4G05220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 235.0 bits (598), Expect = 9.1e-62 Identity = 110/194 (56.70%), Postives = 148/194 (76.29%), Query Frame = 0
BLAST of Spg036883 vs. TAIR 10
Match: AT1G61760.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 226.1 bits (575), Expect = 4.2e-59 Identity = 109/194 (56.19%), Postives = 143/194 (73.71%), Query Frame = 0
BLAST of Spg036883 vs. TAIR 10
Match: AT3G11650.1 (NDR1/HIN1-like 2 ) HSP 1 Score: 84.0 bits (206), Expect = 2.6e-16 Identity = 51/155 (32.90%), Postives = 82/155 (52.90%), Query Frame = 0
BLAST of Spg036883 vs. TAIR 10
Match: AT2G27080.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 79.7 bits (195), Expect = 4.9e-15 Identity = 54/152 (35.53%), Postives = 85/152 (55.92%), Query Frame = 0
BLAST of Spg036883 vs. TAIR 10
Match: AT2G27080.2 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 79.7 bits (195), Expect = 4.9e-15 Identity = 54/152 (35.53%), Postives = 85/152 (55.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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