Homology
BLAST of Spg036846 vs. NCBI nr
Match:
XP_038893557.1 (pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Benincasa hispida])
HSP 1 Score: 268.1 bits (684), Expect = 4.6e-68
Identity = 133/148 (89.86%), Postives = 136/148 (91.89%), Query Frame = 0
Query: 2 GFFVNGYVRARMIDLFAKDSSFLDALRVFHDVDCENVVCWNAIVSAAVRNVENLMVLDIF 61
GFFVNGYVRA MIDLFAKDSSFLDALRVFHDVDCENVVCWNAIVSAAVRN ENLM LD+F
Sbjct: 191 GFFVNGYVRAGMIDLFAKDSSFLDALRVFHDVDCENVVCWNAIVSAAVRNGENLMALDLF 250
Query: 62 NRMCCGFLKPNSFTFSSVLTACAALEDLEFEKRVQGRVIKCGGENVFVETTLIDLYAKCG 121
N MC GFL+PNSFTFSSVLTACAALEDLEF KRVQGRVIKCGGE+VFVET LID YAKCG
Sbjct: 251 NTMCSGFLEPNSFTFSSVLTACAALEDLEFGKRVQGRVIKCGGEDVFVETALIDSYAKCG 310
Query: 122 DMDEAVKTFLRMSNRNVVSWTAIISGFV 150
D DEAVK FLRM RNVVSWTAIISGFV
Sbjct: 311 DPDEAVKIFLRMPIRNVVSWTAIISGFV 338
BLAST of Spg036846 vs. NCBI nr
Match:
XP_023519257.1 (pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 260.4 bits (664), Expect = 9.6e-66
Identity = 128/148 (86.49%), Postives = 135/148 (91.22%), Query Frame = 0
Query: 2 GFFVNGYVRARMIDLFAKDSSFLDALRVFHDVDCENVVCWNAIVSAAVRNVENLMVLDIF 61
GFFVNGYVRA MIDLFAKDSSFLDALRVFHDVDCENVVCWNAIVSAAVRN EN M LD++
Sbjct: 177 GFFVNGYVRAGMIDLFAKDSSFLDALRVFHDVDCENVVCWNAIVSAAVRNGENFMALDLY 236
Query: 62 NRMCCGFLKPNSFTFSSVLTACAALEDLEFEKRVQGRVIKCGGENVFVETTLIDLYAKCG 121
N MC GFL+PNSFTFSSVLTACAALE EF KRVQG+VIKCGGE+VFVET LIDLY+KCG
Sbjct: 237 NTMCHGFLEPNSFTFSSVLTACAALEHPEFGKRVQGKVIKCGGEDVFVETALIDLYSKCG 296
Query: 122 DMDEAVKTFLRMSNRNVVSWTAIISGFV 150
+MDEAVK FLRM RNVVSWTAIISGFV
Sbjct: 297 EMDEAVKIFLRMPIRNVVSWTAIISGFV 324
BLAST of Spg036846 vs. NCBI nr
Match:
XP_022137435.1 (pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Momordica charantia] >XP_022137436.1 pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Momordica charantia] >XP_022137437.1 pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Momordica charantia] >XP_022137439.1 pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Momordica charantia])
HSP 1 Score: 258.8 bits (660), Expect = 2.8e-65
Identity = 128/148 (86.49%), Postives = 136/148 (91.89%), Query Frame = 0
Query: 2 GFFVNGYVRARMIDLFAKDSSFLDALRVFHDVDCENVVCWNAIVSAAVRNVENLMVLDIF 61
G FVNGYVRA MIDLFAKDSSF DALRVF+DVDCENVVCWNAIVSAAVRN EN + LD+F
Sbjct: 177 GSFVNGYVRAGMIDLFAKDSSFPDALRVFNDVDCENVVCWNAIVSAAVRNGENSVALDLF 236
Query: 62 NRMCCGFLKPNSFTFSSVLTACAALEDLEFEKRVQGRVIKCGGENVFVETTLIDLYAKCG 121
N MC GFL+PNSFTFSSVLTACAA+EDLEF KRVQGRVIKCGGE+VFVET LIDLYAKCG
Sbjct: 237 NTMCSGFLEPNSFTFSSVLTACAAVEDLEFGKRVQGRVIKCGGEDVFVETALIDLYAKCG 296
Query: 122 DMDEAVKTFLRMSNRNVVSWTAIISGFV 150
D+DEAVKTFL+M RNVVSWTAIISGFV
Sbjct: 297 DIDEAVKTFLQMPIRNVVSWTAIISGFV 324
BLAST of Spg036846 vs. NCBI nr
Match:
XP_023001341.1 (pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Cucurbita maxima])
HSP 1 Score: 255.8 bits (652), Expect = 2.4e-64
Identity = 126/148 (85.14%), Postives = 134/148 (90.54%), Query Frame = 0
Query: 2 GFFVNGYVRARMIDLFAKDSSFLDALRVFHDVDCENVVCWNAIVSAAVRNVENLMVLDIF 61
GFFVNGYVRA MIDLFAK+SSFLDALRVF DVDCENVVCWNAIVSAAVRN EN M LD++
Sbjct: 177 GFFVNGYVRAGMIDLFAKESSFLDALRVFQDVDCENVVCWNAIVSAAVRNGENFMALDLY 236
Query: 62 NRMCCGFLKPNSFTFSSVLTACAALEDLEFEKRVQGRVIKCGGENVFVETTLIDLYAKCG 121
N MC GFL+PNSFTFSSVLTACAALE EF KRVQG+VIKCGGE+VFVET LIDLY+KCG
Sbjct: 237 NTMCRGFLEPNSFTFSSVLTACAALEHPEFGKRVQGKVIKCGGEDVFVETALIDLYSKCG 296
Query: 122 DMDEAVKTFLRMSNRNVVSWTAIISGFV 150
+MDEAVK FLRM RNVVSWTAIISGFV
Sbjct: 297 EMDEAVKIFLRMPIRNVVSWTAIISGFV 324
BLAST of Spg036846 vs. NCBI nr
Match:
XP_022923751.1 (pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Cucurbita moschata] >KAG6584457.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020048.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 255.0 bits (650), Expect = 4.0e-64
Identity = 125/148 (84.46%), Postives = 133/148 (89.86%), Query Frame = 0
Query: 2 GFFVNGYVRARMIDLFAKDSSFLDALRVFHDVDCENVVCWNAIVSAAVRNVENLMVLDIF 61
GFFVNGYVRA MIDLFAKDSSFLDALRVFHD+ CENVVCWNAIVSAAVRN EN M LD++
Sbjct: 177 GFFVNGYVRAGMIDLFAKDSSFLDALRVFHDIHCENVVCWNAIVSAAVRNGENFMALDLY 236
Query: 62 NRMCCGFLKPNSFTFSSVLTACAALEDLEFEKRVQGRVIKCGGENVFVETTLIDLYAKCG 121
N MC G L+PNSFTFSSVLTACAALE EF KRVQG+VIKCGGE+VFVET LIDLY+KCG
Sbjct: 237 NTMCRGLLEPNSFTFSSVLTACAALEHPEFGKRVQGKVIKCGGEDVFVETALIDLYSKCG 296
Query: 122 DMDEAVKTFLRMSNRNVVSWTAIISGFV 150
+MDEAVK FLRM RNVVSWTAIISGFV
Sbjct: 297 EMDEAVKIFLRMPIRNVVSWTAIISGFV 324
BLAST of Spg036846 vs. ExPASy Swiss-Prot
Match:
Q9CA56 (Pentatricopeptide repeat-containing protein At1g74600, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E69 PE=3 SV=1)
HSP 1 Score: 165.6 bits (418), Expect = 4.2e-40
Identity = 79/148 (53.38%), Postives = 105/148 (70.95%), Query Frame = 0
Query: 1 MGFFVNGYVRARMIDLFAKDSSFLDALRVFHDVDCENVVCWNAIVSAAVRNVENLMVLDI 60
MG+F V + +ID+F+K+ F DA +VF D NV CWN I++ A+RN V D+
Sbjct: 179 MGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDL 238
Query: 61 FNRMCCGFLKPNSFTFSSVLTACAALEDLEFEKRVQGRVIKCGGENVFVETTLIDLYAKC 120
F+ MC GF KP+S+T+SSVL ACA+LE L F K VQ RVIKCG E+VFV T ++DLYAKC
Sbjct: 239 FHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKC 298
Query: 121 GDMDEAVKTFLRMSNRNVVSWTAIISGF 149
G M EA++ F R+ N +VVSWT ++SG+
Sbjct: 299 GHMAEAMEVFSRIPNPSVVSWTVMLSGY 326
BLAST of Spg036846 vs. ExPASy Swiss-Prot
Match:
Q9C507 (Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E66 PE=3 SV=1)
HSP 1 Score: 103.2 bits (256), Expect = 2.6e-21
Identity = 48/141 (34.04%), Postives = 90/141 (63.83%), Query Frame = 0
Query: 8 YVRARMIDLFAKDSSFLDALRVFHDVDCENVVCWNAIVSAAVRNVENLMVLDIFNRMCCG 67
+V+ +ID+++K S A VF+ + +VV WN+++ +N ++ + +F+ M
Sbjct: 440 FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHS 499
Query: 68 FLKPNSFTFSSVLTACAALEDLEFEKRVQGRVIKCGGENVFVETTLIDLYAKCGDMDEAV 127
+L+ N TF +V+ AC+++ LE K V ++I G +++F +T LID+YAKCGD++ A
Sbjct: 500 YLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDTALIDMYAKCGDLNAAE 559
Query: 128 KTFLRMSNRNVVSWTAIISGF 149
F MS+R++VSW+++I+ +
Sbjct: 560 TVFRAMSSRSIVSWSSMINAY 580
BLAST of Spg036846 vs. ExPASy Swiss-Prot
Match:
Q9LR69 (Pentatricopeptide repeat-containing protein At1g03540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E4 PE=2 SV=1)
HSP 1 Score: 102.1 bits (253), Expect = 5.7e-21
Identity = 57/149 (38.26%), Postives = 89/149 (59.73%), Query Frame = 0
Query: 2 GFFVNGYVRARMIDLFAKDSSFLDALRVFHDVDCENVVCWNAIVSAAVRNVENLMVLDIF 61
GF N ++ + + L+ + +DA RVF ++ +V+CW A++SA +N L +F
Sbjct: 193 GFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLF 252
Query: 62 NRMCCG-FLKPNSFTFSSVLTACAALEDLEFEKRVQGRVIKCG-GENVFVETTLIDLYAK 121
M G L P+ TF +VLTAC L L+ K + G++I G G NV VE++L+D+Y K
Sbjct: 253 YAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGK 312
Query: 122 CGDMDEAVKTFLRMSNRNVVSWTAIISGF 149
CG + EA + F MS +N VSW+A++ G+
Sbjct: 313 CGSVREARQVFNGMSKKNSVSWSALLGGY 341
BLAST of Spg036846 vs. ExPASy Swiss-Prot
Match:
Q9FLX6 (Pentatricopeptide repeat-containing protein At5g52850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H31 PE=2 SV=1)
HSP 1 Score: 101.3 bits (251), Expect = 9.8e-21
Identity = 51/138 (36.96%), Postives = 76/138 (55.07%), Query Frame = 0
Query: 13 MIDLFAKDSSFLDALRVFHDVDCENVVCWNAIVSAAVRNVENLMVLDIFNRMCCGFLKPN 72
++ L+ K +A ++F ++ V W ++SA ++ E L +F M PN
Sbjct: 64 LLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPN 123
Query: 73 SFTFSSVLTACAALEDLEFEKRVQGRVIKCGGE-NVFVETTLIDLYAKCGDMDEAVKTFL 132
FTFSSV+ +CA L D+ + RV G VIK G E N V ++L DLY+KCG EA + F
Sbjct: 124 EFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFS 183
Query: 133 RMSNRNVVSWTAIISGFV 150
+ N + +SWT +IS V
Sbjct: 184 SLQNADTISWTMMISSLV 201
BLAST of Spg036846 vs. ExPASy Swiss-Prot
Match:
Q9SX45 (Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E42 PE=2 SV=1)
HSP 1 Score: 99.0 bits (245), Expect = 4.9e-20
Identity = 54/142 (38.03%), Postives = 85/142 (59.86%), Query Frame = 0
Query: 8 YVRARMIDLFAKDSSFLDALRVFHDVDCENVVCWNAIVSAAVRNVENLMVLDIFNRMCCG 67
++ + ++D++ K S + DA +VF ++ NVV W A+++ V++ + +F M
Sbjct: 241 FIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKS 300
Query: 68 FLKPNSFTFSSVLTACAALEDLEFEKRVQGRVIKCGGE-NVFVETTLIDLYAKCGDMDEA 127
+ PN T SSVL+ACA + L +RV +IK E N TTLIDLY KCG ++EA
Sbjct: 301 DVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEA 360
Query: 128 VKTFLRMSNRNVVSWTAIISGF 149
+ F R+ +NV +WTA+I+GF
Sbjct: 361 ILVFERLHEKNVYTWTAMINGF 382
BLAST of Spg036846 vs. ExPASy TrEMBL
Match:
A0A6J1C6M8 (pentatricopeptide repeat-containing protein At1g74600, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111008883 PE=4 SV=1)
HSP 1 Score: 258.8 bits (660), Expect = 1.4e-65
Identity = 128/148 (86.49%), Postives = 136/148 (91.89%), Query Frame = 0
Query: 2 GFFVNGYVRARMIDLFAKDSSFLDALRVFHDVDCENVVCWNAIVSAAVRNVENLMVLDIF 61
G FVNGYVRA MIDLFAKDSSF DALRVF+DVDCENVVCWNAIVSAAVRN EN + LD+F
Sbjct: 177 GSFVNGYVRAGMIDLFAKDSSFPDALRVFNDVDCENVVCWNAIVSAAVRNGENSVALDLF 236
Query: 62 NRMCCGFLKPNSFTFSSVLTACAALEDLEFEKRVQGRVIKCGGENVFVETTLIDLYAKCG 121
N MC GFL+PNSFTFSSVLTACAA+EDLEF KRVQGRVIKCGGE+VFVET LIDLYAKCG
Sbjct: 237 NTMCSGFLEPNSFTFSSVLTACAAVEDLEFGKRVQGRVIKCGGEDVFVETALIDLYAKCG 296
Query: 122 DMDEAVKTFLRMSNRNVVSWTAIISGFV 150
D+DEAVKTFL+M RNVVSWTAIISGFV
Sbjct: 297 DIDEAVKTFLQMPIRNVVSWTAIISGFV 324
BLAST of Spg036846 vs. ExPASy TrEMBL
Match:
A0A6J1KIC5 (pentatricopeptide repeat-containing protein At1g74600, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111495501 PE=4 SV=1)
HSP 1 Score: 255.8 bits (652), Expect = 1.1e-64
Identity = 126/148 (85.14%), Postives = 134/148 (90.54%), Query Frame = 0
Query: 2 GFFVNGYVRARMIDLFAKDSSFLDALRVFHDVDCENVVCWNAIVSAAVRNVENLMVLDIF 61
GFFVNGYVRA MIDLFAK+SSFLDALRVF DVDCENVVCWNAIVSAAVRN EN M LD++
Sbjct: 177 GFFVNGYVRAGMIDLFAKESSFLDALRVFQDVDCENVVCWNAIVSAAVRNGENFMALDLY 236
Query: 62 NRMCCGFLKPNSFTFSSVLTACAALEDLEFEKRVQGRVIKCGGENVFVETTLIDLYAKCG 121
N MC GFL+PNSFTFSSVLTACAALE EF KRVQG+VIKCGGE+VFVET LIDLY+KCG
Sbjct: 237 NTMCRGFLEPNSFTFSSVLTACAALEHPEFGKRVQGKVIKCGGEDVFVETALIDLYSKCG 296
Query: 122 DMDEAVKTFLRMSNRNVVSWTAIISGFV 150
+MDEAVK FLRM RNVVSWTAIISGFV
Sbjct: 297 EMDEAVKIFLRMPIRNVVSWTAIISGFV 324
BLAST of Spg036846 vs. ExPASy TrEMBL
Match:
A0A6J1E7L2 (pentatricopeptide repeat-containing protein At1g74600, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111431363 PE=4 SV=1)
HSP 1 Score: 255.0 bits (650), Expect = 2.0e-64
Identity = 125/148 (84.46%), Postives = 133/148 (89.86%), Query Frame = 0
Query: 2 GFFVNGYVRARMIDLFAKDSSFLDALRVFHDVDCENVVCWNAIVSAAVRNVENLMVLDIF 61
GFFVNGYVRA MIDLFAKDSSFLDALRVFHD+ CENVVCWNAIVSAAVRN EN M LD++
Sbjct: 177 GFFVNGYVRAGMIDLFAKDSSFLDALRVFHDIHCENVVCWNAIVSAAVRNGENFMALDLY 236
Query: 62 NRMCCGFLKPNSFTFSSVLTACAALEDLEFEKRVQGRVIKCGGENVFVETTLIDLYAKCG 121
N MC G L+PNSFTFSSVLTACAALE EF KRVQG+VIKCGGE+VFVET LIDLY+KCG
Sbjct: 237 NTMCRGLLEPNSFTFSSVLTACAALEHPEFGKRVQGKVIKCGGEDVFVETALIDLYSKCG 296
Query: 122 DMDEAVKTFLRMSNRNVVSWTAIISGFV 150
+MDEAVK FLRM RNVVSWTAIISGFV
Sbjct: 297 EMDEAVKIFLRMPIRNVVSWTAIISGFV 324
BLAST of Spg036846 vs. ExPASy TrEMBL
Match:
A0A5A7T3B5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold112G00710 PE=4 SV=1)
HSP 1 Score: 242.7 bits (618), Expect = 1.0e-60
Identity = 119/148 (80.41%), Postives = 127/148 (85.81%), Query Frame = 0
Query: 2 GFFVNGYVRARMIDLFAKDSSFLDALRVFHDVDCENVVCWNAIVSAAVRNVENLMVLDIF 61
GFF NGYVR MIDLFAKDS FLDALRVFHDVDC NVVCWNAIVSAAV N E LM LD+F
Sbjct: 134 GFFDNGYVRTVMIDLFAKDSKFLDALRVFHDVDCANVVCWNAIVSAAVTNGEYLMALDLF 193
Query: 62 NRMCCGFLKPNSFTFSSVLTACAALEDLEFEKRVQGRVIKCGGENVFVETTLIDLYAKCG 121
NRMC FL+PNSFTFSSVLTAC+AL+DLEF K VQGRVIKCGG +VFVET L+ LYAKCG
Sbjct: 194 NRMCSKFLEPNSFTFSSVLTACSALQDLEFGKSVQGRVIKCGGGDVFVETALVSLYAKCG 253
Query: 122 DMDEAVKTFLRMSNRNVVSWTAIISGFV 150
DMDEAVK F +M RNVVSWT I+SGFV
Sbjct: 254 DMDEAVKIFFQMPIRNVVSWTVIMSGFV 281
BLAST of Spg036846 vs. ExPASy TrEMBL
Match:
A0A5D3BIJ5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00800 PE=4 SV=1)
HSP 1 Score: 242.7 bits (618), Expect = 1.0e-60
Identity = 119/148 (80.41%), Postives = 127/148 (85.81%), Query Frame = 0
Query: 2 GFFVNGYVRARMIDLFAKDSSFLDALRVFHDVDCENVVCWNAIVSAAVRNVENLMVLDIF 61
GFF NGYVR MIDLFAKDS FLDALRVFHDVDC NVVCWNAIVSAAV N E LM LD+F
Sbjct: 215 GFFDNGYVRTVMIDLFAKDSKFLDALRVFHDVDCANVVCWNAIVSAAVTNGEYLMALDLF 274
Query: 62 NRMCCGFLKPNSFTFSSVLTACAALEDLEFEKRVQGRVIKCGGENVFVETTLIDLYAKCG 121
NRMC FL+PNSFTFSSVLTAC+AL+DLEF K VQGRVIKCGG +VFVET L+ LYAKCG
Sbjct: 275 NRMCSKFLEPNSFTFSSVLTACSALQDLEFGKSVQGRVIKCGGGDVFVETALVSLYAKCG 334
Query: 122 DMDEAVKTFLRMSNRNVVSWTAIISGFV 150
DMDEAVK F +M RNVVSWT I+SGFV
Sbjct: 335 DMDEAVKIFFQMPIRNVVSWTVIMSGFV 362
BLAST of Spg036846 vs. TAIR 10
Match:
AT1G74600.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 165.6 bits (418), Expect = 3.0e-41
Identity = 79/148 (53.38%), Postives = 105/148 (70.95%), Query Frame = 0
Query: 1 MGFFVNGYVRARMIDLFAKDSSFLDALRVFHDVDCENVVCWNAIVSAAVRNVENLMVLDI 60
MG+F V + +ID+F+K+ F DA +VF D NV CWN I++ A+RN V D+
Sbjct: 179 MGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDL 238
Query: 61 FNRMCCGFLKPNSFTFSSVLTACAALEDLEFEKRVQGRVIKCGGENVFVETTLIDLYAKC 120
F+ MC GF KP+S+T+SSVL ACA+LE L F K VQ RVIKCG E+VFV T ++DLYAKC
Sbjct: 239 FHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKC 298
Query: 121 GDMDEAVKTFLRMSNRNVVSWTAIISGF 149
G M EA++ F R+ N +VVSWT ++SG+
Sbjct: 299 GHMAEAMEVFSRIPNPSVVSWTVMLSGY 326
BLAST of Spg036846 vs. TAIR 10
Match:
AT1G69350.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 103.2 bits (256), Expect = 1.8e-22
Identity = 48/141 (34.04%), Postives = 90/141 (63.83%), Query Frame = 0
Query: 8 YVRARMIDLFAKDSSFLDALRVFHDVDCENVVCWNAIVSAAVRNVENLMVLDIFNRMCCG 67
+V+ +ID+++K S A VF+ + +VV WN+++ +N ++ + +F+ M
Sbjct: 440 FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHS 499
Query: 68 FLKPNSFTFSSVLTACAALEDLEFEKRVQGRVIKCGGENVFVETTLIDLYAKCGDMDEAV 127
+L+ N TF +V+ AC+++ LE K V ++I G +++F +T LID+YAKCGD++ A
Sbjct: 500 YLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDTALIDMYAKCGDLNAAE 559
Query: 128 KTFLRMSNRNVVSWTAIISGF 149
F MS+R++VSW+++I+ +
Sbjct: 560 TVFRAMSSRSIVSWSSMINAY 580
BLAST of Spg036846 vs. TAIR 10
Match:
AT1G03540.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 102.1 bits (253), Expect = 4.1e-22
Identity = 57/149 (38.26%), Postives = 89/149 (59.73%), Query Frame = 0
Query: 2 GFFVNGYVRARMIDLFAKDSSFLDALRVFHDVDCENVVCWNAIVSAAVRNVENLMVLDIF 61
GF N ++ + + L+ + +DA RVF ++ +V+CW A++SA +N L +F
Sbjct: 193 GFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLF 252
Query: 62 NRMCCG-FLKPNSFTFSSVLTACAALEDLEFEKRVQGRVIKCG-GENVFVETTLIDLYAK 121
M G L P+ TF +VLTAC L L+ K + G++I G G NV VE++L+D+Y K
Sbjct: 253 YAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGK 312
Query: 122 CGDMDEAVKTFLRMSNRNVVSWTAIISGF 149
CG + EA + F MS +N VSW+A++ G+
Sbjct: 313 CGSVREARQVFNGMSKKNSVSWSALLGGY 341
BLAST of Spg036846 vs. TAIR 10
Match:
AT5G52850.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 101.3 bits (251), Expect = 6.9e-22
Identity = 51/138 (36.96%), Postives = 76/138 (55.07%), Query Frame = 0
Query: 13 MIDLFAKDSSFLDALRVFHDVDCENVVCWNAIVSAAVRNVENLMVLDIFNRMCCGFLKPN 72
++ L+ K +A ++F ++ V W ++SA ++ E L +F M PN
Sbjct: 64 LLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPN 123
Query: 73 SFTFSSVLTACAALEDLEFEKRVQGRVIKCGGE-NVFVETTLIDLYAKCGDMDEAVKTFL 132
FTFSSV+ +CA L D+ + RV G VIK G E N V ++L DLY+KCG EA + F
Sbjct: 124 EFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFS 183
Query: 133 RMSNRNVVSWTAIISGFV 150
+ N + +SWT +IS V
Sbjct: 184 SLQNADTISWTMMISSLV 201
BLAST of Spg036846 vs. TAIR 10
Match:
AT1G50270.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 99.0 bits (245), Expect = 3.4e-21
Identity = 54/142 (38.03%), Postives = 85/142 (59.86%), Query Frame = 0
Query: 8 YVRARMIDLFAKDSSFLDALRVFHDVDCENVVCWNAIVSAAVRNVENLMVLDIFNRMCCG 67
++ + ++D++ K S + DA +VF ++ NVV W A+++ V++ + +F M
Sbjct: 241 FIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKS 300
Query: 68 FLKPNSFTFSSVLTACAALEDLEFEKRVQGRVIKCGGE-NVFVETTLIDLYAKCGDMDEA 127
+ PN T SSVL+ACA + L +RV +IK E N TTLIDLY KCG ++EA
Sbjct: 301 DVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEA 360
Query: 128 VKTFLRMSNRNVVSWTAIISGF 149
+ F R+ +NV +WTA+I+GF
Sbjct: 361 ILVFERLHEKNVYTWTAMINGF 382
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038893557.1 | 4.6e-68 | 89.86 | pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Benincasa ... | [more] |
XP_023519257.1 | 9.6e-66 | 86.49 | pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Cucurbita ... | [more] |
XP_022137435.1 | 2.8e-65 | 86.49 | pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Momordica ... | [more] |
XP_023001341.1 | 2.4e-64 | 85.14 | pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Cucurbita ... | [more] |
XP_022923751.1 | 4.0e-64 | 84.46 | pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Cucurbita ... | [more] |
Match Name | E-value | Identity | Description | |
Q9CA56 | 4.2e-40 | 53.38 | Pentatricopeptide repeat-containing protein At1g74600, chloroplastic OS=Arabidop... | [more] |
Q9C507 | 2.6e-21 | 34.04 | Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS... | [more] |
Q9LR69 | 5.7e-21 | 38.26 | Pentatricopeptide repeat-containing protein At1g03540 OS=Arabidopsis thaliana OX... | [more] |
Q9FLX6 | 9.8e-21 | 36.96 | Pentatricopeptide repeat-containing protein At5g52850, chloroplastic OS=Arabidop... | [more] |
Q9SX45 | 4.9e-20 | 38.03 | Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1C6M8 | 1.4e-65 | 86.49 | pentatricopeptide repeat-containing protein At1g74600, chloroplastic OS=Momordic... | [more] |
A0A6J1KIC5 | 1.1e-64 | 85.14 | pentatricopeptide repeat-containing protein At1g74600, chloroplastic OS=Cucurbit... | [more] |
A0A6J1E7L2 | 2.0e-64 | 84.46 | pentatricopeptide repeat-containing protein At1g74600, chloroplastic OS=Cucurbit... | [more] |
A0A5A7T3B5 | 1.0e-60 | 80.41 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A5D3BIJ5 | 1.0e-60 | 80.41 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
AT1G74600.1 | 3.0e-41 | 53.38 | pentatricopeptide (PPR) repeat-containing protein | [more] |
AT1G69350.1 | 1.8e-22 | 34.04 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G03540.1 | 4.1e-22 | 38.26 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT5G52850.1 | 6.9e-22 | 36.96 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G50270.1 | 3.4e-21 | 38.03 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |