Spg036745 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg036745
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold5: 41487625 .. 41488023 (-)
RNA-Seq ExpressionSpg036745
SyntenySpg036745
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAATGAACTCAAAGACGAAGGCCGATATCAGTAGCAGCAGGAACTATTCTCTGAACTCCCTATCCTTCTCTGGCTACTTAACTTCAAAAGATCGGCAACCCAATTCAAGCGCGGCTGATCGCAATGATGGTGGTGGGAAGGTTTTGGGTTTGCCTCGGCCGAAACAATCCCAAGTTGCTTGTAAAGCGCGACTTGATGGTTATGATGGAGAGGGATCGTTGTTTGTTGTGAGAAACAACAGTATCAGAAGAGGAGGTCGAAGGATAAGGGATGAGGAAGATGAGTCGTCGGCGTGGTCTGGTTGGAGAGTTTTTCGGTCGTTTGTTTCGCCATGCAGGGAGTGCAGAGCCAGCAAGCCCACTGTCATCGAACCGCGTCCCGTTCAAAGGGCTTGA

mRNA sequence

ATGGGAATGAACTCAAAGACGAAGGCCGATATCAGTAGCAGCAGGAACTATTCTCTGAACTCCCTATCCTTCTCTGGCTACTTAACTTCAAAAGATCGGCAACCCAATTCAAGCGCGGCTGATCGCAATGATGGTGGTGGGAAGGTTTTGGGTTTGCCTCGGCCGAAACAATCCCAAGTTGCTTGTAAAGCGCGACTTGATGGTTATGATGGAGAGGGATCGTTGTTTGTTGTGAGAAACAACAGTATCAGAAGAGGAGGTCGAAGGATAAGGGATGAGGAAGATGAGTCGTCGGCGTGGTCTGGTTGGAGAGTTTTTCGGTCGTTTGTTTCGCCATGCAGGGAGTGCAGAGCCAGCAAGCCCACTGTCATCGAACCGCGTCCCGTTCAAAGGGCTTGA

Coding sequence (CDS)

ATGGGAATGAACTCAAAGACGAAGGCCGATATCAGTAGCAGCAGGAACTATTCTCTGAACTCCCTATCCTTCTCTGGCTACTTAACTTCAAAAGATCGGCAACCCAATTCAAGCGCGGCTGATCGCAATGATGGTGGTGGGAAGGTTTTGGGTTTGCCTCGGCCGAAACAATCCCAAGTTGCTTGTAAAGCGCGACTTGATGGTTATGATGGAGAGGGATCGTTGTTTGTTGTGAGAAACAACAGTATCAGAAGAGGAGGTCGAAGGATAAGGGATGAGGAAGATGAGTCGTCGGCGTGGTCTGGTTGGAGAGTTTTTCGGTCGTTTGTTTCGCCATGCAGGGAGTGCAGAGCCAGCAAGCCCACTGTCATCGAACCGCGTCCCGTTCAAAGGGCTTGA

Protein sequence

MGMNSKTKADISSSRNYSLNSLSFSGYLTSKDRQPNSSAADRNDGGGKVLGLPRPKQSQVACKARLDGYDGEGSLFVVRNNSIRRGGRRIRDEEDESSAWSGWRVFRSFVSPCRECRASKPTVIEPRPVQRA
Homology
BLAST of Spg036745 vs. NCBI nr
Match: KAG6573282.1 (hypothetical protein SDJN03_27169, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 147.9 bits (372), Expect = 6.2e-32
Identity = 85/145 (58.62%), Postives = 102/145 (70.34%), Query Frame = 0

Query: 1   MGMNSKTKADISSSRNYSLNSLSFSGYLTSKDRQPN-------------SSAADRNDGGG 60
           M ++SKT  DISSS + S  SLSFSG++TSKDRQP+             SS A+   G  
Sbjct: 1   MAVHSKTNPDISSSSSSSNYSLSFSGFVTSKDRQPDKIIRTPDQRFEFGSSVANHYGGQS 60

Query: 61  KVLGLPRPKQSQVACKARLDGYDGEGSLFVVRNNSIRRGGRRIRDEEDESSAWSGWRVFR 120
            VL  PRP+Q+QV+CK +L     E    +VRN+SIRRGGRRIR+EE+ES+ WSGW VFR
Sbjct: 61  LVLPRPRPEQAQVSCKRQL-----ERDELMVRNHSIRRGGRRIREEEEEST-WSGWSVFR 120

Query: 121 SFVSPCRECRASKPTVIEPRPVQRA 133
           SFVSPCRECRASKP V+E RPVQRA
Sbjct: 121 SFVSPCRECRASKPAVVEARPVQRA 139

BLAST of Spg036745 vs. NCBI nr
Match: KGN64696.1 (hypothetical protein Csa_013090 [Cucumis sativus])

HSP 1 Score: 104.4 bits (259), Expect = 7.8e-19
Identity = 59/126 (46.83%), Postives = 83/126 (65.87%), Query Frame = 0

Query: 6   KTKADISSSRNYSLNSLSFSGYLTSKDR-QPNSSAADRNDGGGKVLGLPRPKQSQVACKA 65
           + K  +SS+ +  LNSLSFSGYL SKDR  P+  + + +D   KV+     + S     +
Sbjct: 5   RKKPHMSSTTSTWLNSLSFSGYLNSKDRDDPSLGSIETHDRKIKVVD-HGFEFSPTCGGS 64

Query: 66  RLDGYDGEGSLFVVRNNSIRRGGRRIRDEEDESSAWSGWRVFRSFVSPCRECRASKPTVI 125
            +  Y    S ++VRNNSI+RG ++I +E+DE S WSGWR+F  FV PCRECRA KP+V+
Sbjct: 65  SVSDYGERSSAYIVRNNSIKRGSKKIWEEKDE-SRWSGWRIFWLFVLPCRECRARKPSVV 124

Query: 126 EPRPVQ 131
           +PRP+Q
Sbjct: 125 QPRPIQ 128

BLAST of Spg036745 vs. NCBI nr
Match: XP_022139818.1 (uncharacterized protein LOC111010640 [Momordica charantia])

HSP 1 Score: 102.1 bits (253), Expect = 3.9e-18
Identity = 72/150 (48.00%), Postives = 88/150 (58.67%), Query Frame = 0

Query: 1   MGMNSKTKA--DISS--SRNYSL-NSLSFSGYLTSKDRQPNSSAADRNDGGGKVLGLPRP 60
           MG++ K  A  DISS  S +YS  +SLSF+ YLT KDR+PNS    +    G   G    
Sbjct: 8   MGIHPKNPAQPDISSSGSSSYSFSSSLSFAAYLTCKDREPNSGGLIKTGDQGFEFG---- 67

Query: 61  KQSQVACKARLDGYDGEG----------SLFVVRNNSIRRGGRRIRDEEDESSAWSGW-R 120
               + C    DG  G G             VVRNNSIRRGGRRI+DEE+ESS+ + W  
Sbjct: 68  ---PICCDDH-DGGSGSGRRRIRDDDGQRWLVVRNNSIRRGGRRIKDEEEESSSSTSWSS 127

Query: 121 VFRSFVSPCRECRASKPTVI---EPRPVQR 132
           VFRSFVSPCRECRASKP+ +   +  P+QR
Sbjct: 128 VFRSFVSPCRECRASKPSAVIEAQAHPIQR 149

BLAST of Spg036745 vs. NCBI nr
Match: KAA0057006.1 (hypothetical protein E6C27_scaffold96G001880 [Cucumis melo var. makuwa] >TYK26433.1 hypothetical protein E5676_scaffold861G00970 [Cucumis melo var. makuwa])

HSP 1 Score: 100.1 bits (248), Expect = 1.5e-17
Identity = 60/132 (45.45%), Postives = 84/132 (63.64%), Query Frame = 0

Query: 1   MGMNSKTKADISSSRNYSLNSLSFSGYLTSKDR-QPNSSAADRNDGGGKVLGLPRPKQSQ 60
           MG+++K     S++ +  +NSLSFSGYL SKDR +P+  + +  D   KV+         
Sbjct: 1   MGIHTKKPHMSSTTTSTWVNSLSFSGYLNSKDREEPSLGSIETQDRKIKVVNHGFEFGGP 60

Query: 61  VACKARLDGYDGE-GSLFVVRNNSIRRGGRRIRDEEDESSAWSGWRVFRSFVSPCRECRA 120
               + +  Y GE  S ++VRNNSIRRG ++IR+E++ES     WRV  SFV PCRECRA
Sbjct: 61  TCRGSSVSDYIGERSSPYIVRNNSIRRGSKKIREEKEESR----WRVVWSFVLPCRECRA 120

Query: 121 SKPTVIEPRPVQ 131
           SKP V++PRP+Q
Sbjct: 121 SKPNVVQPRPIQ 128

BLAST of Spg036745 vs. NCBI nr
Match: TYI64440.1 (hypothetical protein E1A91_D09G088900v1 [Gossypium mustelinum])

HSP 1 Score: 56.2 bits (134), Expect = 2.4e-04
Identity = 45/129 (34.88%), Postives = 66/129 (51.16%), Query Frame = 0

Query: 3   MNSKTKADISSSRNYSLNSLSF-----SGYLTSKDRQP-NSSAADRNDGGGKVLGLPRPK 62
           M+  T    SSS +YSL+  S        + ++KD+ P +S+ + R D GG   G   P 
Sbjct: 1   MDVATDHSNSSSLDYSLSFTSLVCIDPPNHQSNKDQSPHDSNKSSRPDSGG---GHLLPL 60

Query: 63  QSQVACKARLDGYDGEGSLFVVRNNSIRRGGRRIRDEEDESSAWSGWRVFRSFVSPCREC 122
           +  +  +    G DGE  L    N  +R  G+R   E  +S  W G ++ RSFVSPCREC
Sbjct: 61  EFLLKSRPPSLGGDGERKL----NGEVRNQGKR---ETMDSKPWFGRKLLRSFVSPCREC 119

Query: 123 RASKPTVIE 126
           R  KP+ ++
Sbjct: 121 RVVKPSTVK 119

BLAST of Spg036745 vs. ExPASy TrEMBL
Match: A0A0A0LXF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G075010 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 3.8e-19
Identity = 59/126 (46.83%), Postives = 83/126 (65.87%), Query Frame = 0

Query: 6   KTKADISSSRNYSLNSLSFSGYLTSKDR-QPNSSAADRNDGGGKVLGLPRPKQSQVACKA 65
           + K  +SS+ +  LNSLSFSGYL SKDR  P+  + + +D   KV+     + S     +
Sbjct: 5   RKKPHMSSTTSTWLNSLSFSGYLNSKDRDDPSLGSIETHDRKIKVVD-HGFEFSPTCGGS 64

Query: 66  RLDGYDGEGSLFVVRNNSIRRGGRRIRDEEDESSAWSGWRVFRSFVSPCRECRASKPTVI 125
            +  Y    S ++VRNNSI+RG ++I +E+DE S WSGWR+F  FV PCRECRA KP+V+
Sbjct: 65  SVSDYGERSSAYIVRNNSIKRGSKKIWEEKDE-SRWSGWRIFWLFVLPCRECRARKPSVV 124

Query: 126 EPRPVQ 131
           +PRP+Q
Sbjct: 125 QPRPIQ 128

BLAST of Spg036745 vs. ExPASy TrEMBL
Match: A0A6J1CGL7 (uncharacterized protein LOC111010640 OS=Momordica charantia OX=3673 GN=LOC111010640 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.9e-18
Identity = 72/150 (48.00%), Postives = 88/150 (58.67%), Query Frame = 0

Query: 1   MGMNSKTKA--DISS--SRNYSL-NSLSFSGYLTSKDRQPNSSAADRNDGGGKVLGLPRP 60
           MG++ K  A  DISS  S +YS  +SLSF+ YLT KDR+PNS    +    G   G    
Sbjct: 8   MGIHPKNPAQPDISSSGSSSYSFSSSLSFAAYLTCKDREPNSGGLIKTGDQGFEFG---- 67

Query: 61  KQSQVACKARLDGYDGEG----------SLFVVRNNSIRRGGRRIRDEEDESSAWSGW-R 120
               + C    DG  G G             VVRNNSIRRGGRRI+DEE+ESS+ + W  
Sbjct: 68  ---PICCDDH-DGGSGSGRRRIRDDDGQRWLVVRNNSIRRGGRRIKDEEEESSSSTSWSS 127

Query: 121 VFRSFVSPCRECRASKPTVI---EPRPVQR 132
           VFRSFVSPCRECRASKP+ +   +  P+QR
Sbjct: 128 VFRSFVSPCRECRASKPSAVIEAQAHPIQR 149

BLAST of Spg036745 vs. ExPASy TrEMBL
Match: A0A5D3DS79 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00970 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 7.1e-18
Identity = 60/132 (45.45%), Postives = 84/132 (63.64%), Query Frame = 0

Query: 1   MGMNSKTKADISSSRNYSLNSLSFSGYLTSKDR-QPNSSAADRNDGGGKVLGLPRPKQSQ 60
           MG+++K     S++ +  +NSLSFSGYL SKDR +P+  + +  D   KV+         
Sbjct: 1   MGIHTKKPHMSSTTTSTWVNSLSFSGYLNSKDREEPSLGSIETQDRKIKVVNHGFEFGGP 60

Query: 61  VACKARLDGYDGE-GSLFVVRNNSIRRGGRRIRDEEDESSAWSGWRVFRSFVSPCRECRA 120
               + +  Y GE  S ++VRNNSIRRG ++IR+E++ES     WRV  SFV PCRECRA
Sbjct: 61  TCRGSSVSDYIGERSSPYIVRNNSIRRGSKKIREEKEESR----WRVVWSFVLPCRECRA 120

Query: 121 SKPTVIEPRPVQ 131
           SKP V++PRP+Q
Sbjct: 121 SKPNVVQPRPIQ 128

BLAST of Spg036745 vs. ExPASy TrEMBL
Match: A0A5D2TGY7 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D09G088900v1 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.2e-04
Identity = 45/129 (34.88%), Postives = 66/129 (51.16%), Query Frame = 0

Query: 3   MNSKTKADISSSRNYSLNSLSF-----SGYLTSKDRQP-NSSAADRNDGGGKVLGLPRPK 62
           M+  T    SSS +YSL+  S        + ++KD+ P +S+ + R D GG   G   P 
Sbjct: 1   MDVATDHSNSSSLDYSLSFTSLVCIDPPNHQSNKDQSPHDSNKSSRPDSGG---GHLLPL 60

Query: 63  QSQVACKARLDGYDGEGSLFVVRNNSIRRGGRRIRDEEDESSAWSGWRVFRSFVSPCREC 122
           +  +  +    G DGE  L    N  +R  G+R   E  +S  W G ++ RSFVSPCREC
Sbjct: 61  EFLLKSRPPSLGGDGERKL----NGEVRNQGKR---ETMDSKPWFGRKLLRSFVSPCREC 119

Query: 123 RASKPTVIE 126
           R  KP+ ++
Sbjct: 121 RVVKPSTVK 119

BLAST of Spg036745 vs. ExPASy TrEMBL
Match: A0A7J8YN65 (Uncharacterized protein OS=Gossypium aridum OX=34290 GN=Goari_020602 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.5e-04
Identity = 43/132 (32.58%), Postives = 67/132 (50.76%), Query Frame = 0

Query: 1   MGMNSKTKADISSSRNYSLNSLSF-----SGYLTSKDRQPNSS--AADRNDGGGKVLGLP 60
           + M+  T    SSS +YSL+  S        + ++KD+ P+ S  ++  + GGG +L L 
Sbjct: 9   ISMDVATDHSNSSSLDYSLSFTSLVCIDPPNHQSNKDQSPHDSNKSSRPDSGGGHLLPL- 68

Query: 61  RPKQSQVACKARLDGYDGEGSLFVVRNNSIRRGGRRIRDEEDESSAWSGWRVFRSFVSPC 120
                +   K+R     G+G   +  N  +R  G+R   E   S  W G ++ RSFVSPC
Sbjct: 69  -----EFLLKSRPPSLSGDGERKL--NGEVRNQGKR---ETMGSKPWFGRKLLRSFVSPC 128

Query: 121 RECRASKPTVIE 126
           RECR  KP+ ++
Sbjct: 129 RECRVVKPSTVK 129

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6573282.16.2e-3258.62hypothetical protein SDJN03_27169, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN64696.17.8e-1946.83hypothetical protein Csa_013090 [Cucumis sativus][more]
XP_022139818.13.9e-1848.00uncharacterized protein LOC111010640 [Momordica charantia][more]
KAA0057006.11.5e-1745.45hypothetical protein E6C27_scaffold96G001880 [Cucumis melo var. makuwa] >TYK2643... [more]
TYI64440.12.4e-0434.88hypothetical protein E1A91_D09G088900v1 [Gossypium mustelinum][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LXF93.8e-1946.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G075010 PE=4 SV=1[more]
A0A6J1CGL71.9e-1848.00uncharacterized protein LOC111010640 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
A0A5D3DS797.1e-1845.45Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D2TGY71.2e-0434.88Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D09G088900v1 P... [more]
A0A7J8YN651.5e-0432.58Uncharacterized protein OS=Gossypium aridum OX=34290 GN=Goari_020602 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..58

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg036745.1Spg036745.1mRNA