Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAATGAACTCAAAGACGAAGGCCGATATCAGTAGCAGCAGGAACTATTCTCTGAACTCCCTATCCTTCTCTGGCTACTTAACTTCAAAAGATCGGCAACCCAATTCAAGCGCGGCTGATCGCAATGATGGTGGTGGGAAGGTTTTGGGTTTGCCTCGGCCGAAACAATCCCAAGTTGCTTGTAAAGCGCGACTTGATGGTTATGATGGAGAGGGATCGTTGTTTGTTGTGAGAAACAACAGTATCAGAAGAGGAGGTCGAAGGATAAGGGATGAGGAAGATGAGTCGTCGGCGTGGTCTGGTTGGAGAGTTTTTCGGTCGTTTGTTTCGCCATGCAGGGAGTGCAGAGCCAGCAAGCCCACTGTCATCGAACCGCGTCCCGTTCAAAGGGCTTGA
mRNA sequence
ATGGGAATGAACTCAAAGACGAAGGCCGATATCAGTAGCAGCAGGAACTATTCTCTGAACTCCCTATCCTTCTCTGGCTACTTAACTTCAAAAGATCGGCAACCCAATTCAAGCGCGGCTGATCGCAATGATGGTGGTGGGAAGGTTTTGGGTTTGCCTCGGCCGAAACAATCCCAAGTTGCTTGTAAAGCGCGACTTGATGGTTATGATGGAGAGGGATCGTTGTTTGTTGTGAGAAACAACAGTATCAGAAGAGGAGGTCGAAGGATAAGGGATGAGGAAGATGAGTCGTCGGCGTGGTCTGGTTGGAGAGTTTTTCGGTCGTTTGTTTCGCCATGCAGGGAGTGCAGAGCCAGCAAGCCCACTGTCATCGAACCGCGTCCCGTTCAAAGGGCTTGA
Coding sequence (CDS)
ATGGGAATGAACTCAAAGACGAAGGCCGATATCAGTAGCAGCAGGAACTATTCTCTGAACTCCCTATCCTTCTCTGGCTACTTAACTTCAAAAGATCGGCAACCCAATTCAAGCGCGGCTGATCGCAATGATGGTGGTGGGAAGGTTTTGGGTTTGCCTCGGCCGAAACAATCCCAAGTTGCTTGTAAAGCGCGACTTGATGGTTATGATGGAGAGGGATCGTTGTTTGTTGTGAGAAACAACAGTATCAGAAGAGGAGGTCGAAGGATAAGGGATGAGGAAGATGAGTCGTCGGCGTGGTCTGGTTGGAGAGTTTTTCGGTCGTTTGTTTCGCCATGCAGGGAGTGCAGAGCCAGCAAGCCCACTGTCATCGAACCGCGTCCCGTTCAAAGGGCTTGA
Protein sequence
MGMNSKTKADISSSRNYSLNSLSFSGYLTSKDRQPNSSAADRNDGGGKVLGLPRPKQSQVACKARLDGYDGEGSLFVVRNNSIRRGGRRIRDEEDESSAWSGWRVFRSFVSPCRECRASKPTVIEPRPVQRA
Homology
BLAST of Spg036745 vs. NCBI nr
Match:
KAG6573282.1 (hypothetical protein SDJN03_27169, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 147.9 bits (372), Expect = 6.2e-32
Identity = 85/145 (58.62%), Postives = 102/145 (70.34%), Query Frame = 0
Query: 1 MGMNSKTKADISSSRNYSLNSLSFSGYLTSKDRQPN-------------SSAADRNDGGG 60
M ++SKT DISSS + S SLSFSG++TSKDRQP+ SS A+ G
Sbjct: 1 MAVHSKTNPDISSSSSSSNYSLSFSGFVTSKDRQPDKIIRTPDQRFEFGSSVANHYGGQS 60
Query: 61 KVLGLPRPKQSQVACKARLDGYDGEGSLFVVRNNSIRRGGRRIRDEEDESSAWSGWRVFR 120
VL PRP+Q+QV+CK +L E +VRN+SIRRGGRRIR+EE+ES+ WSGW VFR
Sbjct: 61 LVLPRPRPEQAQVSCKRQL-----ERDELMVRNHSIRRGGRRIREEEEEST-WSGWSVFR 120
Query: 121 SFVSPCRECRASKPTVIEPRPVQRA 133
SFVSPCRECRASKP V+E RPVQRA
Sbjct: 121 SFVSPCRECRASKPAVVEARPVQRA 139
BLAST of Spg036745 vs. NCBI nr
Match:
KGN64696.1 (hypothetical protein Csa_013090 [Cucumis sativus])
HSP 1 Score: 104.4 bits (259), Expect = 7.8e-19
Identity = 59/126 (46.83%), Postives = 83/126 (65.87%), Query Frame = 0
Query: 6 KTKADISSSRNYSLNSLSFSGYLTSKDR-QPNSSAADRNDGGGKVLGLPRPKQSQVACKA 65
+ K +SS+ + LNSLSFSGYL SKDR P+ + + +D KV+ + S +
Sbjct: 5 RKKPHMSSTTSTWLNSLSFSGYLNSKDRDDPSLGSIETHDRKIKVVD-HGFEFSPTCGGS 64
Query: 66 RLDGYDGEGSLFVVRNNSIRRGGRRIRDEEDESSAWSGWRVFRSFVSPCRECRASKPTVI 125
+ Y S ++VRNNSI+RG ++I +E+DE S WSGWR+F FV PCRECRA KP+V+
Sbjct: 65 SVSDYGERSSAYIVRNNSIKRGSKKIWEEKDE-SRWSGWRIFWLFVLPCRECRARKPSVV 124
Query: 126 EPRPVQ 131
+PRP+Q
Sbjct: 125 QPRPIQ 128
BLAST of Spg036745 vs. NCBI nr
Match:
XP_022139818.1 (uncharacterized protein LOC111010640 [Momordica charantia])
HSP 1 Score: 102.1 bits (253), Expect = 3.9e-18
Identity = 72/150 (48.00%), Postives = 88/150 (58.67%), Query Frame = 0
Query: 1 MGMNSKTKA--DISS--SRNYSL-NSLSFSGYLTSKDRQPNSSAADRNDGGGKVLGLPRP 60
MG++ K A DISS S +YS +SLSF+ YLT KDR+PNS + G G
Sbjct: 8 MGIHPKNPAQPDISSSGSSSYSFSSSLSFAAYLTCKDREPNSGGLIKTGDQGFEFG---- 67
Query: 61 KQSQVACKARLDGYDGEG----------SLFVVRNNSIRRGGRRIRDEEDESSAWSGW-R 120
+ C DG G G VVRNNSIRRGGRRI+DEE+ESS+ + W
Sbjct: 68 ---PICCDDH-DGGSGSGRRRIRDDDGQRWLVVRNNSIRRGGRRIKDEEEESSSSTSWSS 127
Query: 121 VFRSFVSPCRECRASKPTVI---EPRPVQR 132
VFRSFVSPCRECRASKP+ + + P+QR
Sbjct: 128 VFRSFVSPCRECRASKPSAVIEAQAHPIQR 149
BLAST of Spg036745 vs. NCBI nr
Match:
KAA0057006.1 (hypothetical protein E6C27_scaffold96G001880 [Cucumis melo var. makuwa] >TYK26433.1 hypothetical protein E5676_scaffold861G00970 [Cucumis melo var. makuwa])
HSP 1 Score: 100.1 bits (248), Expect = 1.5e-17
Identity = 60/132 (45.45%), Postives = 84/132 (63.64%), Query Frame = 0
Query: 1 MGMNSKTKADISSSRNYSLNSLSFSGYLTSKDR-QPNSSAADRNDGGGKVLGLPRPKQSQ 60
MG+++K S++ + +NSLSFSGYL SKDR +P+ + + D KV+
Sbjct: 1 MGIHTKKPHMSSTTTSTWVNSLSFSGYLNSKDREEPSLGSIETQDRKIKVVNHGFEFGGP 60
Query: 61 VACKARLDGYDGE-GSLFVVRNNSIRRGGRRIRDEEDESSAWSGWRVFRSFVSPCRECRA 120
+ + Y GE S ++VRNNSIRRG ++IR+E++ES WRV SFV PCRECRA
Sbjct: 61 TCRGSSVSDYIGERSSPYIVRNNSIRRGSKKIREEKEESR----WRVVWSFVLPCRECRA 120
Query: 121 SKPTVIEPRPVQ 131
SKP V++PRP+Q
Sbjct: 121 SKPNVVQPRPIQ 128
BLAST of Spg036745 vs. NCBI nr
Match:
TYI64440.1 (hypothetical protein E1A91_D09G088900v1 [Gossypium mustelinum])
HSP 1 Score: 56.2 bits (134), Expect = 2.4e-04
Identity = 45/129 (34.88%), Postives = 66/129 (51.16%), Query Frame = 0
Query: 3 MNSKTKADISSSRNYSLNSLSF-----SGYLTSKDRQP-NSSAADRNDGGGKVLGLPRPK 62
M+ T SSS +YSL+ S + ++KD+ P +S+ + R D GG G P
Sbjct: 1 MDVATDHSNSSSLDYSLSFTSLVCIDPPNHQSNKDQSPHDSNKSSRPDSGG---GHLLPL 60
Query: 63 QSQVACKARLDGYDGEGSLFVVRNNSIRRGGRRIRDEEDESSAWSGWRVFRSFVSPCREC 122
+ + + G DGE L N +R G+R E +S W G ++ RSFVSPCREC
Sbjct: 61 EFLLKSRPPSLGGDGERKL----NGEVRNQGKR---ETMDSKPWFGRKLLRSFVSPCREC 119
Query: 123 RASKPTVIE 126
R KP+ ++
Sbjct: 121 RVVKPSTVK 119
BLAST of Spg036745 vs. ExPASy TrEMBL
Match:
A0A0A0LXF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G075010 PE=4 SV=1)
HSP 1 Score: 104.4 bits (259), Expect = 3.8e-19
Identity = 59/126 (46.83%), Postives = 83/126 (65.87%), Query Frame = 0
Query: 6 KTKADISSSRNYSLNSLSFSGYLTSKDR-QPNSSAADRNDGGGKVLGLPRPKQSQVACKA 65
+ K +SS+ + LNSLSFSGYL SKDR P+ + + +D KV+ + S +
Sbjct: 5 RKKPHMSSTTSTWLNSLSFSGYLNSKDRDDPSLGSIETHDRKIKVVD-HGFEFSPTCGGS 64
Query: 66 RLDGYDGEGSLFVVRNNSIRRGGRRIRDEEDESSAWSGWRVFRSFVSPCRECRASKPTVI 125
+ Y S ++VRNNSI+RG ++I +E+DE S WSGWR+F FV PCRECRA KP+V+
Sbjct: 65 SVSDYGERSSAYIVRNNSIKRGSKKIWEEKDE-SRWSGWRIFWLFVLPCRECRARKPSVV 124
Query: 126 EPRPVQ 131
+PRP+Q
Sbjct: 125 QPRPIQ 128
BLAST of Spg036745 vs. ExPASy TrEMBL
Match:
A0A6J1CGL7 (uncharacterized protein LOC111010640 OS=Momordica charantia OX=3673 GN=LOC111010640 PE=4 SV=1)
HSP 1 Score: 102.1 bits (253), Expect = 1.9e-18
Identity = 72/150 (48.00%), Postives = 88/150 (58.67%), Query Frame = 0
Query: 1 MGMNSKTKA--DISS--SRNYSL-NSLSFSGYLTSKDRQPNSSAADRNDGGGKVLGLPRP 60
MG++ K A DISS S +YS +SLSF+ YLT KDR+PNS + G G
Sbjct: 8 MGIHPKNPAQPDISSSGSSSYSFSSSLSFAAYLTCKDREPNSGGLIKTGDQGFEFG---- 67
Query: 61 KQSQVACKARLDGYDGEG----------SLFVVRNNSIRRGGRRIRDEEDESSAWSGW-R 120
+ C DG G G VVRNNSIRRGGRRI+DEE+ESS+ + W
Sbjct: 68 ---PICCDDH-DGGSGSGRRRIRDDDGQRWLVVRNNSIRRGGRRIKDEEEESSSSTSWSS 127
Query: 121 VFRSFVSPCRECRASKPTVI---EPRPVQR 132
VFRSFVSPCRECRASKP+ + + P+QR
Sbjct: 128 VFRSFVSPCRECRASKPSAVIEAQAHPIQR 149
BLAST of Spg036745 vs. ExPASy TrEMBL
Match:
A0A5D3DS79 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00970 PE=4 SV=1)
HSP 1 Score: 100.1 bits (248), Expect = 7.1e-18
Identity = 60/132 (45.45%), Postives = 84/132 (63.64%), Query Frame = 0
Query: 1 MGMNSKTKADISSSRNYSLNSLSFSGYLTSKDR-QPNSSAADRNDGGGKVLGLPRPKQSQ 60
MG+++K S++ + +NSLSFSGYL SKDR +P+ + + D KV+
Sbjct: 1 MGIHTKKPHMSSTTTSTWVNSLSFSGYLNSKDREEPSLGSIETQDRKIKVVNHGFEFGGP 60
Query: 61 VACKARLDGYDGE-GSLFVVRNNSIRRGGRRIRDEEDESSAWSGWRVFRSFVSPCRECRA 120
+ + Y GE S ++VRNNSIRRG ++IR+E++ES WRV SFV PCRECRA
Sbjct: 61 TCRGSSVSDYIGERSSPYIVRNNSIRRGSKKIREEKEESR----WRVVWSFVLPCRECRA 120
Query: 121 SKPTVIEPRPVQ 131
SKP V++PRP+Q
Sbjct: 121 SKPNVVQPRPIQ 128
BLAST of Spg036745 vs. ExPASy TrEMBL
Match:
A0A5D2TGY7 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D09G088900v1 PE=4 SV=1)
HSP 1 Score: 56.2 bits (134), Expect = 1.2e-04
Identity = 45/129 (34.88%), Postives = 66/129 (51.16%), Query Frame = 0
Query: 3 MNSKTKADISSSRNYSLNSLSF-----SGYLTSKDRQP-NSSAADRNDGGGKVLGLPRPK 62
M+ T SSS +YSL+ S + ++KD+ P +S+ + R D GG G P
Sbjct: 1 MDVATDHSNSSSLDYSLSFTSLVCIDPPNHQSNKDQSPHDSNKSSRPDSGG---GHLLPL 60
Query: 63 QSQVACKARLDGYDGEGSLFVVRNNSIRRGGRRIRDEEDESSAWSGWRVFRSFVSPCREC 122
+ + + G DGE L N +R G+R E +S W G ++ RSFVSPCREC
Sbjct: 61 EFLLKSRPPSLGGDGERKL----NGEVRNQGKR---ETMDSKPWFGRKLLRSFVSPCREC 119
Query: 123 RASKPTVIE 126
R KP+ ++
Sbjct: 121 RVVKPSTVK 119
BLAST of Spg036745 vs. ExPASy TrEMBL
Match:
A0A7J8YN65 (Uncharacterized protein OS=Gossypium aridum OX=34290 GN=Goari_020602 PE=4 SV=1)
HSP 1 Score: 55.8 bits (133), Expect = 1.5e-04
Identity = 43/132 (32.58%), Postives = 67/132 (50.76%), Query Frame = 0
Query: 1 MGMNSKTKADISSSRNYSLNSLSF-----SGYLTSKDRQPNSS--AADRNDGGGKVLGLP 60
+ M+ T SSS +YSL+ S + ++KD+ P+ S ++ + GGG +L L
Sbjct: 9 ISMDVATDHSNSSSLDYSLSFTSLVCIDPPNHQSNKDQSPHDSNKSSRPDSGGGHLLPL- 68
Query: 61 RPKQSQVACKARLDGYDGEGSLFVVRNNSIRRGGRRIRDEEDESSAWSGWRVFRSFVSPC 120
+ K+R G+G + N +R G+R E S W G ++ RSFVSPC
Sbjct: 69 -----EFLLKSRPPSLSGDGERKL--NGEVRNQGKR---ETMGSKPWFGRKLLRSFVSPC 128
Query: 121 RECRASKPTVIE 126
RECR KP+ ++
Sbjct: 129 RECRVVKPSTVK 129
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG6573282.1 | 6.2e-32 | 58.62 | hypothetical protein SDJN03_27169, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KGN64696.1 | 7.8e-19 | 46.83 | hypothetical protein Csa_013090 [Cucumis sativus] | [more] |
XP_022139818.1 | 3.9e-18 | 48.00 | uncharacterized protein LOC111010640 [Momordica charantia] | [more] |
KAA0057006.1 | 1.5e-17 | 45.45 | hypothetical protein E6C27_scaffold96G001880 [Cucumis melo var. makuwa] >TYK2643... | [more] |
TYI64440.1 | 2.4e-04 | 34.88 | hypothetical protein E1A91_D09G088900v1 [Gossypium mustelinum] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LXF9 | 3.8e-19 | 46.83 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G075010 PE=4 SV=1 | [more] |
A0A6J1CGL7 | 1.9e-18 | 48.00 | uncharacterized protein LOC111010640 OS=Momordica charantia OX=3673 GN=LOC111010... | [more] |
A0A5D3DS79 | 7.1e-18 | 45.45 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5D2TGY7 | 1.2e-04 | 34.88 | Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D09G088900v1 P... | [more] |
A0A7J8YN65 | 1.5e-04 | 32.58 | Uncharacterized protein OS=Gossypium aridum OX=34290 GN=Goari_020602 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |