Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACCACTAGCGCATGGAGTGCATGGCGAGATAACTTGGCGAAACGGATGTACGCTAACTGGAATAGTGTATGATCACCTCGCATGACATCATTTTTTTGTTAAATACTTTTGGGGAATTAATTTGTGCGACCCTATTGCATATGCAATCTTTTGTTTAAAAACTATGATGTATATACGCCTGAACGTGTAATTACTAATGCCAACTTGTGTTTTGAATGGTAATGAAATAGATTTGAACTTCGTATATCGTGAATGTACGCTGTAGAACTGTATTATATAACTGCATTATATGATTATTGGTTTCAAGTTGTTTGATTATGAAGGTTGTTTACTATGTGCAAATGGCAGCACCAGCACCAGTATCAAATAATTCGAAGCACGTTTGGACCCCAGAGAAGGATGTCGTGCTTGTTCAATGTCTGGTCCACTTGGTACAGATCGGTGGTTGGCGTGGTGACAATGGCACCTTCCGACCAGGGTTCCATAACCAAATTGGTAAGATGATGAAGGAAAGATTGTTGGGTTGCAACATCGTAGTCAGTCCAAACATTGATTCCAGGGCCAGGCTGCGAAAGAGACAGTACATGGCCATCGCTGAAATGATGGGCCCAGCATGCAGTGGATTCGGTTGGAATGAAGAACGGAAATGCATCGAGGCAGAAAAGGATATTTTCGAGAAATGGGTCGAGGTAGGAGAACTGTAACATACCATAATGCTATACCTATGCAATATACTTTTCGAGATATACACTGATCGTTTGAAATGTCTGTCCTACAAGGTCACCCACAGGCAAAGGGGTTGCGCAACCGACCATTCCCATGGTTTAATGAACTTGCACTGGTGTTCGGGAAGGACAGTGCACAGGGGGGAAGAGCACGCACACCCATTGAGATTGCCCCAAAACCGGAACCTAAGGCCGACTTGGAAAACGACATGAACGTCGAGTACGATGATTTTTACGTCCCCAATCCACCTGTTCTTGATCCCACTTCGGGGGAGGAGAACTGCACTACACCGACAGCGAGAGCTGGAGCTGCTGGTGCTGGGCCCATCACGAACACCACAAAGGAGCAGACTGTCCATGGGGAATGTGGCTGA
mRNA sequence
ATGGAGACCACTAGCGCATGGAGTGCATGGCGAGATAACTTGGCGAAACGGATGTACGCTAACTGGAATAGTGTTGTTTACTATGTGCAAATGGCAGCACCAGCACCAGTATCAAATAATTCGAAGCACGTTTGGACCCCAGAGAAGGATGTCGTGCTTGTTCAATGTCTGGTCCACTTGGTACAGATCGGTGGTTGGCGTGGTGACAATGGCACCTTCCGACCAGGGTTCCATAACCAAATTGGTAAGATGATGAAGGAAAGATTGTTGGGTTGCAACATCGTAGTCAGTCCAAACATTGATTCCAGGGCCAGGCTGCGAAAGAGACAGTACATGGCCATCGCTGAAATGATGGGCCCAGCATGCAGTGGATTCGGTTGGAATGAAGAACGGAAATGCATCGAGGCAGAAAAGGATATTTTCGAGAAATGGGTCGAGGCAAAGGGGTTGCGCAACCGACCATTCCCATGGTTTAATGAACTTGCACTGGTGTTCGGGAAGGACAGTGCACAGGGGGGAAGAGCACGCACACCCATTGAGATTGCCCCAAAACCGGAACCTAAGGCCGACTTGGAAAACGACATGAACGTCGAGTACGATGATTTTTACGTCCCCAATCCACCTGTTCTTGATCCCACTTCGGGGGAGGAGAACTGCACTACACCGACAGCGAGAGCTGGAGCTGCTGGTGCTGGGCCCATCACGAACACCACAAAGGAGCAGACTGTCCATGGGGAATGTGGCTGA
Coding sequence (CDS)
ATGGAGACCACTAGCGCATGGAGTGCATGGCGAGATAACTTGGCGAAACGGATGTACGCTAACTGGAATAGTGTTGTTTACTATGTGCAAATGGCAGCACCAGCACCAGTATCAAATAATTCGAAGCACGTTTGGACCCCAGAGAAGGATGTCGTGCTTGTTCAATGTCTGGTCCACTTGGTACAGATCGGTGGTTGGCGTGGTGACAATGGCACCTTCCGACCAGGGTTCCATAACCAAATTGGTAAGATGATGAAGGAAAGATTGTTGGGTTGCAACATCGTAGTCAGTCCAAACATTGATTCCAGGGCCAGGCTGCGAAAGAGACAGTACATGGCCATCGCTGAAATGATGGGCCCAGCATGCAGTGGATTCGGTTGGAATGAAGAACGGAAATGCATCGAGGCAGAAAAGGATATTTTCGAGAAATGGGTCGAGGCAAAGGGGTTGCGCAACCGACCATTCCCATGGTTTAATGAACTTGCACTGGTGTTCGGGAAGGACAGTGCACAGGGGGGAAGAGCACGCACACCCATTGAGATTGCCCCAAAACCGGAACCTAAGGCCGACTTGGAAAACGACATGAACGTCGAGTACGATGATTTTTACGTCCCCAATCCACCTGTTCTTGATCCCACTTCGGGGGAGGAGAACTGCACTACACCGACAGCGAGAGCTGGAGCTGCTGGTGCTGGGCCCATCACGAACACCACAAAGGAGCAGACTGTCCATGGGGAATGTGGCTGA
Protein sequence
METTSAWSAWRDNLAKRMYANWNSVVYYVQMAAPAPVSNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVSPNIDSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAEKDIFEKWVEAKGLRNRPFPWFNELALVFGKDSAQGGRARTPIEIAPKPEPKADLENDMNVEYDDFYVPNPPVLDPTSGEENCTTPTARAGAAGAGPITNTTKEQTVHGECG
Homology
BLAST of Spg036694 vs. NCBI nr
Match:
KAA0033487.1 (uncharacterized protein E6C27_scaffold261G00210 [Cucumis melo var. makuwa])
HSP 1 Score: 209.1 bits (531), Expect = 4.2e-50
Identity = 98/198 (49.49%), Postives = 139/198 (70.20%), Query Frame = 0
Query: 38 SNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVS 97
S +KH WT +D LV+CL+ LV+ G WR DNGTF+PG+ Q+ K+MKE++L NI V+
Sbjct: 91 SKVTKHWWTTIEDEALVECLLQLVEKGCWRVDNGTFKPGYLVQVQKLMKEKILESNIQVT 150
Query: 98 PNIDSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAEKDIFEKWVE----AKGLRNR 157
PN++S ++ K+QY IAEMMGP CSGF WN+ERKCIEAEK + WV+ A+ L N+
Sbjct: 151 PNLESGVKILKKQYTTIAEMMGPVCSGFSWNKERKCIEAEKSVSNDWVKGHLNARYLLNK 210
Query: 158 PFPWFNELALVFGKDSAQGGRARTPIEIAPKPEPKADLENDMNVEYDDFYVPNPPVLDPT 217
PFP+F +L +VFG+D A GG+ +TP+E+ + + E+DM + +DF +PNP L+P
Sbjct: 211 PFPYFYDLEIVFGRDRATGGKCKTPVEMGSQTARDTE-EDDMIINLEDFDIPNPHGLEPP 270
Query: 218 SGEENCTTPTARAGAAGA 232
SGE+ +TPT+ A AG+
Sbjct: 271 SGEDMPSTPTSMAHDAGS 287
BLAST of Spg036694 vs. NCBI nr
Match:
TYK26842.1 (uncharacterized protein E5676_scaffold260G00340 [Cucumis melo var. makuwa])
HSP 1 Score: 209.1 bits (531), Expect = 4.2e-50
Identity = 98/198 (49.49%), Postives = 139/198 (70.20%), Query Frame = 0
Query: 38 SNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVS 97
S +KH WT +D LV+CL+ LV+ G WR DNGTF+PG+ Q+ K+MKE++L NI V+
Sbjct: 91 SKVTKHWWTTIEDEALVECLLQLVEKGCWRVDNGTFKPGYLVQVQKLMKEKILESNIQVT 150
Query: 98 PNIDSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAEKDIFEKWVE----AKGLRNR 157
PN++S ++ K+QY IAEMMGP CSGF WN+ERKCIEAEK + WV+ A+ L N+
Sbjct: 151 PNLESGVKILKKQYTTIAEMMGPVCSGFSWNKERKCIEAEKSVSNDWVKGHLNARYLLNK 210
Query: 158 PFPWFNELALVFGKDSAQGGRARTPIEIAPKPEPKADLENDMNVEYDDFYVPNPPVLDPT 217
PFP+F +L +VFG+D A GG+ +TP+E+ + + E+DM + +DF +PNP L+P
Sbjct: 211 PFPYFYDLEIVFGRDRATGGKCKTPVEMGSQTARDTE-EDDMIINLEDFDIPNPHGLEPP 270
Query: 218 SGEENCTTPTARAGAAGA 232
SGE+ +TPT+ A AG+
Sbjct: 271 SGEDMPSTPTSMAHDAGS 287
BLAST of Spg036694 vs. NCBI nr
Match:
TYJ96933.1 (retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 199.5 bits (506), Expect = 3.3e-47
Identity = 96/198 (48.48%), Postives = 137/198 (69.19%), Query Frame = 0
Query: 38 SNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVS 97
S +KH WT KD LV+CL+ LV+ GGWR +N TF+P + Q+ K+MKE++ NI V+
Sbjct: 6 SKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSNIQVT 65
Query: 98 PNIDSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAEKDIFEKWVE----AKGLRNR 157
N++SR + K+QY AIA+MMGPACS FGWNEERKCIEAEK +F+ WV+ A+GL N+
Sbjct: 66 LNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERKCIEAEKSVFDDWVKGHPNARGLLNK 125
Query: 158 PFPWFNELALVFGKDSAQGGRARTPIEIAPKPEPKADLENDMNVEYDDFYVPNPPVLDPT 217
PF +F +L +VFG+D A GGR + +E+A + + E+DM++ +DF +PNP L+P
Sbjct: 126 PFAYFYDLEIVFGRDKATGGRCKPFVEMASQTARDTE-EDDMDINLEDFDIPNPHGLEPP 185
Query: 218 SGEENCTTPTARAGAAGA 232
SGE+ +T + AG+
Sbjct: 186 SGEDMPSTLISMTHDAGS 202
BLAST of Spg036694 vs. NCBI nr
Match:
XP_008455678.1 (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo])
HSP 1 Score: 199.5 bits (506), Expect = 3.3e-47
Identity = 96/198 (48.48%), Postives = 137/198 (69.19%), Query Frame = 0
Query: 38 SNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVS 97
S +KH WT KD LV+CL+ LV+ GGWR +N TF+P + Q+ K+MKE++ NI V+
Sbjct: 38 SKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSNIQVT 97
Query: 98 PNIDSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAEKDIFEKWVE----AKGLRNR 157
N++SR + K+QY AIA+MMGPACS FGWNEERKCIEAEK +F+ WV+ A+GL N+
Sbjct: 98 LNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERKCIEAEKSVFDDWVKGHPNARGLLNK 157
Query: 158 PFPWFNELALVFGKDSAQGGRARTPIEIAPKPEPKADLENDMNVEYDDFYVPNPPVLDPT 217
PF +F +L +VFG+D A GGR + +E+A + + E+DM++ +DF +PNP L+P
Sbjct: 158 PFAYFYDLEIVFGRDKATGGRCKPFVEMASQTARDTE-EDDMDINLEDFDIPNPHGLEPP 217
Query: 218 SGEENCTTPTARAGAAGA 232
SGE+ +T + AG+
Sbjct: 218 SGEDMPSTLISMTHDAGS 234
BLAST of Spg036694 vs. NCBI nr
Match:
KAA0036924.1 (retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 196.4 bits (498), Expect = 2.8e-46
Identity = 105/240 (43.75%), Postives = 144/240 (60.00%), Query Frame = 0
Query: 1 METTSAWSAWRDNLAKRMYANWNSVVYYVQMAAPAPVSNNSKHVWTPEKDVVLVQCLVHL 60
+ETT+ WS WRDNLA M+ +W ++ + AP +HVWT E++ LV+CL+ L
Sbjct: 29 IETTNEWSQWRDNLAASMFTDW-----HMSTSNRAP-----RHVWTREEEGTLVECLMEL 88
Query: 61 VQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVSPNIDSRARLRKRQYMAIAEMMGP 120
V +GGW+ DNGTFRPG+ Q+ +MM E+L GC + + ID R + KR + AIAEM GP
Sbjct: 89 VSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGP 148
Query: 121 ACSGFGWNEERKCIEAEKDIFEKWVE----AKGLRNRPFPWFNELALVFGKDSAQGGRAR 180
ACSGFGWN+E KCI AEK++F+ WV AKGL N+PFP+++EL VF +D A G A
Sbjct: 149 ACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFCRDRATGRFAE 208
Query: 181 TPIEIAPKPEPKADLEN-DMNVEYDDFYVPNPPVLD---PTSGEENCTTPTARAGAAGAG 233
T ++ EP + DM +DF PPV S ++ C + +RA G
Sbjct: 209 TFADVGSN-EPGGGYDRFDMGDGNEDF----PPVYSQGVDISQDDVCASRPSRASEGRTG 253
BLAST of Spg036694 vs. ExPASy TrEMBL
Match:
A0A5A7SW62 (Myb_DNA-bind_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold261G00210 PE=4 SV=1)
HSP 1 Score: 209.1 bits (531), Expect = 2.0e-50
Identity = 98/198 (49.49%), Postives = 139/198 (70.20%), Query Frame = 0
Query: 38 SNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVS 97
S +KH WT +D LV+CL+ LV+ G WR DNGTF+PG+ Q+ K+MKE++L NI V+
Sbjct: 91 SKVTKHWWTTIEDEALVECLLQLVEKGCWRVDNGTFKPGYLVQVQKLMKEKILESNIQVT 150
Query: 98 PNIDSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAEKDIFEKWVE----AKGLRNR 157
PN++S ++ K+QY IAEMMGP CSGF WN+ERKCIEAEK + WV+ A+ L N+
Sbjct: 151 PNLESGVKILKKQYTTIAEMMGPVCSGFSWNKERKCIEAEKSVSNDWVKGHLNARYLLNK 210
Query: 158 PFPWFNELALVFGKDSAQGGRARTPIEIAPKPEPKADLENDMNVEYDDFYVPNPPVLDPT 217
PFP+F +L +VFG+D A GG+ +TP+E+ + + E+DM + +DF +PNP L+P
Sbjct: 211 PFPYFYDLEIVFGRDRATGGKCKTPVEMGSQTARDTE-EDDMIINLEDFDIPNPHGLEPP 270
Query: 218 SGEENCTTPTARAGAAGA 232
SGE+ +TPT+ A AG+
Sbjct: 271 SGEDMPSTPTSMAHDAGS 287
BLAST of Spg036694 vs. ExPASy TrEMBL
Match:
A0A5D3DTL0 (Myb_DNA-bind_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold260G00340 PE=4 SV=1)
HSP 1 Score: 209.1 bits (531), Expect = 2.0e-50
Identity = 98/198 (49.49%), Postives = 139/198 (70.20%), Query Frame = 0
Query: 38 SNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVS 97
S +KH WT +D LV+CL+ LV+ G WR DNGTF+PG+ Q+ K+MKE++L NI V+
Sbjct: 91 SKVTKHWWTTIEDEALVECLLQLVEKGCWRVDNGTFKPGYLVQVQKLMKEKILESNIQVT 150
Query: 98 PNIDSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAEKDIFEKWVE----AKGLRNR 157
PN++S ++ K+QY IAEMMGP CSGF WN+ERKCIEAEK + WV+ A+ L N+
Sbjct: 151 PNLESGVKILKKQYTTIAEMMGPVCSGFSWNKERKCIEAEKSVSNDWVKGHLNARYLLNK 210
Query: 158 PFPWFNELALVFGKDSAQGGRARTPIEIAPKPEPKADLENDMNVEYDDFYVPNPPVLDPT 217
PFP+F +L +VFG+D A GG+ +TP+E+ + + E+DM + +DF +PNP L+P
Sbjct: 211 PFPYFYDLEIVFGRDRATGGKCKTPVEMGSQTARDTE-EDDMIINLEDFDIPNPHGLEPP 270
Query: 218 SGEENCTTPTARAGAAGA 232
SGE+ +TPT+ A AG+
Sbjct: 271 SGEDMPSTPTSMAHDAGS 287
BLAST of Spg036694 vs. ExPASy TrEMBL
Match:
A0A5D3BC95 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00380 PE=4 SV=1)
HSP 1 Score: 199.5 bits (506), Expect = 1.6e-47
Identity = 96/198 (48.48%), Postives = 137/198 (69.19%), Query Frame = 0
Query: 38 SNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVS 97
S +KH WT KD LV+CL+ LV+ GGWR +N TF+P + Q+ K+MKE++ NI V+
Sbjct: 6 SKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSNIQVT 65
Query: 98 PNIDSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAEKDIFEKWVE----AKGLRNR 157
N++SR + K+QY AIA+MMGPACS FGWNEERKCIEAEK +F+ WV+ A+GL N+
Sbjct: 66 LNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERKCIEAEKSVFDDWVKGHPNARGLLNK 125
Query: 158 PFPWFNELALVFGKDSAQGGRARTPIEIAPKPEPKADLENDMNVEYDDFYVPNPPVLDPT 217
PF +F +L +VFG+D A GGR + +E+A + + E+DM++ +DF +PNP L+P
Sbjct: 126 PFAYFYDLEIVFGRDKATGGRCKPFVEMASQTARDTE-EDDMDINLEDFDIPNPHGLEPP 185
Query: 218 SGEENCTTPTARAGAAGA 232
SGE+ +T + AG+
Sbjct: 186 SGEDMPSTLISMTHDAGS 202
BLAST of Spg036694 vs. ExPASy TrEMBL
Match:
A0A1S3C252 (uncharacterized protein At2g29880-like OS=Cucumis melo OX=3656 GN=LOC103495792 PE=4 SV=1)
HSP 1 Score: 199.5 bits (506), Expect = 1.6e-47
Identity = 96/198 (48.48%), Postives = 137/198 (69.19%), Query Frame = 0
Query: 38 SNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVS 97
S +KH WT KD LV+CL+ LV+ GGWR +N TF+P + Q+ K+MKE++ NI V+
Sbjct: 38 SKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSNIQVT 97
Query: 98 PNIDSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAEKDIFEKWVE----AKGLRNR 157
N++SR + K+QY AIA+MMGPACS FGWNEERKCIEAEK +F+ WV+ A+GL N+
Sbjct: 98 LNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERKCIEAEKSVFDDWVKGHPNARGLLNK 157
Query: 158 PFPWFNELALVFGKDSAQGGRARTPIEIAPKPEPKADLENDMNVEYDDFYVPNPPVLDPT 217
PF +F +L +VFG+D A GGR + +E+A + + E+DM++ +DF +PNP L+P
Sbjct: 158 PFAYFYDLEIVFGRDKATGGRCKPFVEMASQTARDTE-EDDMDINLEDFDIPNPHGLEPP 217
Query: 218 SGEENCTTPTARAGAAGA 232
SGE+ +T + AG+
Sbjct: 218 SGEDMPSTLISMTHDAGS 234
BLAST of Spg036694 vs. ExPASy TrEMBL
Match:
A0A5A7T091 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold9475G00160 PE=4 SV=1)
HSP 1 Score: 196.4 bits (498), Expect = 1.4e-46
Identity = 105/240 (43.75%), Postives = 144/240 (60.00%), Query Frame = 0
Query: 1 METTSAWSAWRDNLAKRMYANWNSVVYYVQMAAPAPVSNNSKHVWTPEKDVVLVQCLVHL 60
+ETT+ WS WRDNLA M+ +W ++ + AP +HVWT E++ LV+CL+ L
Sbjct: 29 IETTNEWSQWRDNLAASMFTDW-----HMSTSNRAP-----RHVWTREEEGTLVECLMEL 88
Query: 61 VQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVSPNIDSRARLRKRQYMAIAEMMGP 120
V +GGW+ DNGTFRPG+ Q+ +MM E+L GC + + ID R + KR + AIAEM GP
Sbjct: 89 VSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGP 148
Query: 121 ACSGFGWNEERKCIEAEKDIFEKWVE----AKGLRNRPFPWFNELALVFGKDSAQGGRAR 180
ACSGFGWN+E KCI AEK++F+ WV AKGL N+PFP+++EL VF +D A G A
Sbjct: 149 ACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFCRDRATGRFAE 208
Query: 181 TPIEIAPKPEPKADLEN-DMNVEYDDFYVPNPPVLD---PTSGEENCTTPTARAGAAGAG 233
T ++ EP + DM +DF PPV S ++ C + +RA G
Sbjct: 209 TFADVGSN-EPGGGYDRFDMGDGNEDF----PPVYSQGVDISQDDVCASRPSRASEGRTG 253
BLAST of Spg036694 vs. TAIR 10
Match:
AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 52.0 bits (123), Expect = 8.0e-07
Identity = 37/152 (24.34%), Postives = 65/152 (42.76%), Query Frame = 0
Query: 38 SNNSKHVWTPEKDVVLVQCLVHLVQIGGWRGDNGTFRPGFHNQIGKMMKERLLGCNIVVS 97
S+ ++ WTP D L+ LV V G G TF N++ + +
Sbjct: 320 SDRTRIFWTPPMDYHLIDLLVEQVNNGNRVGQ--TFITSAWNEMVTAFNAKFGSQH--NK 379
Query: 98 PNIDSRARLRKRQYMAIAEMMGPACSGFGWNEERKCIEAEKDIFEKWV----EAKGLRNR 157
+ +R + +R Y I ++ +GF W+ R + A+ DI+ ++ EA+ R +
Sbjct: 380 DVLKNRYKHLRRLYNDIKFLLEQ--NGFSWDARRDMVIADDDIWNTYIQAHPEARSYRVK 439
Query: 158 PFPWFNELALVFGKDSAQGGRARTPIEIAPKP 186
P + L +FGK+++ G R P P
Sbjct: 440 TIPSYPNLCFIFGKETSDGRYTRLAQAFDPSP 465
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0033487.1 | 4.2e-50 | 49.49 | uncharacterized protein E6C27_scaffold261G00210 [Cucumis melo var. makuwa] | [more] |
| TYK26842.1 | 4.2e-50 | 49.49 | uncharacterized protein E5676_scaffold260G00340 [Cucumis melo var. makuwa] | [more] |
| TYJ96933.1 | 3.3e-47 | 48.48 | retrotransposon protein [Cucumis melo var. makuwa] | [more] |
| XP_008455678.1 | 3.3e-47 | 48.48 | PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo] | [more] |
| KAA0036924.1 | 2.8e-46 | 43.75 | retrotransposon protein [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7SW62 | 2.0e-50 | 49.49 | Myb_DNA-bind_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
| A0A5D3DTL0 | 2.0e-50 | 49.49 | Myb_DNA-bind_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
| A0A5D3BC95 | 1.6e-47 | 48.48 | Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A1S3C252 | 1.6e-47 | 48.48 | uncharacterized protein At2g29880-like OS=Cucumis melo OX=3656 GN=LOC103495792 P... | [more] |
| A0A5A7T091 | 1.4e-46 | 43.75 | Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT2G24960.2 | 8.0e-07 | 24.34 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
