Spg036692 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCTCTTCCCTCTAATCCCTCTCTCGTTTTCCTTTCAATTTCCTTCATTATTCATGGCTTCCTCCAAATTTGCTGACGACGAGATTAAAAATCTAGTCTTGAAATTGCAATCTTTGCTCCCTCAGCTCAACCGTAAGCCCGACGACAACTCTGCGGTATATATATATATATATATACACATTTGTATACTCTCTCTTCTCTTTTTCTTAGACGTAGACGTCAACGTAGAGCTTTTGAGTTCAGTAATGACTTAGTTTACCGTAACTTGGGCAGGTGTCGGCGGCTGAGATTTTGGAGGAGACTTGTGATTACATAAAGAAATTGCAGAGGGAGGTGGATGATCTAAGTGAGAGGCTATGGAAGCAGCTGGAATCAATGGGTGTTGACTTTGAAATGGTTAAAGATCTTCTTCTCACTTAAGAATTTTTCATTTTAATGAATGACAATCTTTCTAGCTCTTTTGGGTAATTATCAAAATATCTTTCTTTTTTTTTTTTTTTTTGGGTTCACTGATCTCACTGTTTTGTATTTTGAAATGGAGTTTGGTCTCAGCATTACCAACCGACAGTTGAGAGATGTGCTCGATTTCATGTTCTATGTAATTTCTATTTTTATGTGCTTCTATTCTATGTTGGTCGAGTGTTTAATATATGTATATCTAATCTTATGCAACTCTTTTTTTTTTCCCTTGTTT ATGGCTTCCTCCAAATTTGCTGACGACGAGATTAAAAATCTAGTCTTGAAATTGCAATCTTTGCTCCCTCAGCTCAACCGTAAGCCCGACGACAACTCTGCGGTGTCGGCGGCTGAGATTTTGGAGGAGACTTGTGATTACATAAAGAAATTGCAGAGGGAGGTGGATGATCTAAGTGAGAGGCTATGGAAGCAGCTGGAATCAATGGGTGTTGACTTTGAAATGGTTAAAGATCTTCTTCTCACTTAA ATGGCTTCCTCCAAATTTGCTGACGACGAGATTAAAAATCTAGTCTTGAAATTGCAATCTTTGCTCCCTCAGCTCAACCGTAAGCCCGACGACAACTCTGCGGTGTCGGCGGCTGAGATTTTGGAGGAGACTTGTGATTACATAAAGAAATTGCAGAGGGAGGTGGATGATCTAAGTGAGAGGCTATGGAAGCAGCTGGAATCAATGGGTGTTGACTTTGAAATGGTTAAAGATCTTCTTCTCACTTAA MASSKFADDEIKNLVLKLQSLLPQLNRKPDDNSAVSAAEILEETCDYIKKLQREVDDLSERLWKQLESMGVDFEMVKDLLLT Homology
BLAST of Spg036692 vs. NCBI nr
Match: XP_011649678.1 (transcription factor PRE5 [Cucumis sativus] >KGN63980.1 hypothetical protein Csa_014368 [Cucumis sativus]) HSP 1 Score: 133.7 bits (335), Expect = 7.5e-28 Identity = 66/80 (82.50%), Postives = 73/80 (91.25%), Query Frame = 0
BLAST of Spg036692 vs. NCBI nr
Match: XP_038895474.1 (transcription factor PRE5-like [Benincasa hispida]) HSP 1 Score: 130.6 bits (327), Expect = 6.3e-27 Identity = 66/83 (79.52%), Postives = 76/83 (91.57%), Query Frame = 0
BLAST of Spg036692 vs. NCBI nr
Match: XP_008440200.1 (PREDICTED: transcription factor PRE5-like [Cucumis melo] >KAA0036068.1 transcription factor PRE5-like [Cucumis melo var. makuwa]) HSP 1 Score: 129.8 bits (325), Expect = 1.1e-26 Identity = 63/81 (77.78%), Postives = 73/81 (90.12%), Query Frame = 0
BLAST of Spg036692 vs. NCBI nr
Match: TYJ98875.1 (transcription factor PRE5-like [Cucumis melo var. makuwa]) HSP 1 Score: 120.6 bits (301), Expect = 6.5e-24 Identity = 58/75 (77.33%), Postives = 67/75 (89.33%), Query Frame = 0
BLAST of Spg036692 vs. NCBI nr
Match: KAG6607436.1 (Transcription factor PRE4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 114.4 bits (285), Expect = 4.7e-22 Identity = 60/77 (77.92%), Postives = 67/77 (87.01%), Query Frame = 0
BLAST of Spg036692 vs. ExPASy Swiss-Prot
Match: Q8GW32 (Transcription factor PRE6 OS=Arabidopsis thaliana OX=3702 GN=PRE6 PE=1 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 7.8e-12 Identity = 36/66 (54.55%), Postives = 51/66 (77.27%), Query Frame = 0
BLAST of Spg036692 vs. ExPASy Swiss-Prot
Match: Q9CA64 (Transcription factor PRE3 OS=Arabidopsis thaliana OX=3702 GN=PRE3 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 2.5e-10 Identity = 32/60 (53.33%), Postives = 47/60 (78.33%), Query Frame = 0
BLAST of Spg036692 vs. ExPASy Swiss-Prot
Match: Q9LXG5 (Transcription factor PRE2 OS=Arabidopsis thaliana OX=3702 GN=PRE2 PE=1 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 7.3e-10 Identity = 30/68 (44.12%), Postives = 52/68 (76.47%), Query Frame = 0
BLAST of Spg036692 vs. ExPASy Swiss-Prot
Match: Q9LJX1 (Transcription factor PRE5 OS=Arabidopsis thaliana OX=3702 GN=PRE5 PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.2e-09 Identity = 31/70 (44.29%), Postives = 54/70 (77.14%), Query Frame = 0
BLAST of Spg036692 vs. ExPASy Swiss-Prot
Match: F4JCN9 (Transcription factor PRE4 OS=Arabidopsis thaliana OX=3702 GN=PRE4 PE=1 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 1.6e-09 Identity = 37/82 (45.12%), Postives = 55/82 (67.07%), Query Frame = 0
BLAST of Spg036692 vs. ExPASy TrEMBL
Match: A0A0A0LQ05 (DNA binding protein OS=Cucumis sativus OX=3659 GN=Csa_1G032990 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 3.6e-28 Identity = 66/80 (82.50%), Postives = 73/80 (91.25%), Query Frame = 0
BLAST of Spg036692 vs. ExPASy TrEMBL
Match: A0A5A7SZP9 (Transcription factor PRE5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold112G00610 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 5.2e-27 Identity = 63/81 (77.78%), Postives = 73/81 (90.12%), Query Frame = 0
BLAST of Spg036692 vs. ExPASy TrEMBL
Match: A0A1S3B0J1 (transcription factor PRE5-like OS=Cucumis melo OX=3656 GN=LOC103484708 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 5.2e-27 Identity = 63/81 (77.78%), Postives = 73/81 (90.12%), Query Frame = 0
BLAST of Spg036692 vs. ExPASy TrEMBL
Match: A0A5D3BKI2 (Transcription factor PRE5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00710 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 3.2e-24 Identity = 58/75 (77.33%), Postives = 67/75 (89.33%), Query Frame = 0
BLAST of Spg036692 vs. ExPASy TrEMBL
Match: A0A5N5I0V3 (Transcription factor PRE6-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_029716 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.2e-12 Identity = 48/81 (59.26%), Postives = 61/81 (75.31%), Query Frame = 0
BLAST of Spg036692 vs. TAIR 10
Match: AT1G26945.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 70.9 bits (172), Expect = 5.5e-13 Identity = 36/66 (54.55%), Postives = 51/66 (77.27%), Query Frame = 0
BLAST of Spg036692 vs. TAIR 10
Match: AT1G74500.1 (activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1 ) HSP 1 Score: 65.9 bits (159), Expect = 1.8e-11 Identity = 32/60 (53.33%), Postives = 47/60 (78.33%), Query Frame = 0
BLAST of Spg036692 vs. TAIR 10
Match: AT5G15160.1 (BANQUO 2 ) HSP 1 Score: 64.3 bits (155), Expect = 5.2e-11 Identity = 30/68 (44.12%), Postives = 52/68 (76.47%), Query Frame = 0
BLAST of Spg036692 vs. TAIR 10
Match: AT3G28857.1 (basic helix-loop-helix (bHLH) DNA-binding family protein ) HSP 1 Score: 63.5 bits (153), Expect = 8.8e-11 Identity = 31/70 (44.29%), Postives = 54/70 (77.14%), Query Frame = 0
BLAST of Spg036692 vs. TAIR 10
Match: AT3G47710.1 (BANQUO 3 ) HSP 1 Score: 63.2 bits (152), Expect = 1.2e-10 Identity = 37/82 (45.12%), Postives = 55/82 (67.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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