Spg036681 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg036681
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	cold-regulated 413 inner membrane protein 1, chloroplastic-like
Location	scaffold5: 40469338 .. 40473329 (-)
RNA-Seq Expression	Spg036681
Synteny	Spg036681

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATGACAGTTAGCCGAATCACTCCGGCTCTGCAATTTTCGTGTTTATCAGTCAGGCGAGCGACGGCTTTACTTGTTGAATCAATTCTAGAGAATCGAGAGAGTGAAGATTGAAGCTGAACGAAGAAGGGAGAAATGGTTTGTATATCTCTGTCGTCTGCTATTTCTCTTCACAGTCCATCTCTCTACAAGTCCAAGCTCTCCGTCCCTCTCTCTCTAAGATCTTCATCGCCGAATGCAAGGCTCTCGTTCAATCCTGCCGCCAAAAAGAGTTCCATCTGTTACAATCCGCTCAGGTAATTTCAGACTCCGAAATCATGCATGTTTGAGTTGAGTAGTGGTTTTGGTTTTAAAAAATCGAGAGTATTGTTTAACAAAGAAAAGTTGTTTGATCAGGTTTGCTGTCGGTAGCGAGGGGATTGCGACGGCGATTCGCAAGAAGAGGAGCCGTGGTTTGAGTGCTGTTTGTTACGCTATGCCTCTTAACGCTCGCACTCTTCAGTGGATCTCCACTATTTCTTCTGTGTAATTCTCCTTTATCTCTATCAGATTCGTGTACTTGCCATACATGAATAAGTACCAAGGCGTCTAATGCTTGGTCTTGGTATATTTTCCTAATTGTGCTTTTGATCGTCGATGTTTTGCTCTCTCAACTGTGGATTTTACGATTTGCAATCTTCGAGATACGATTCTGTTGAATCAGGACAGAATACTCAGTTTTAACCAATACTCAGATGAGGTGTTAAATGTTTTGCTACGATTCTTATGATCCCGATCGCTAATTAATTATGCTTACTTTGATAACATTCAGTGGCTAAATTTATATCTCCAACCGTTAAGATGTCATCACGTTCACCTTTATCTGCTGTTTCTGAGTCCATTGCATGTATCAAAGTATAATTTTAAAACCCTAGATTTCTTCTCCAGGGTTTTAATGCTCGCAAGGGGGACTGGGATTCAGAAGTCATTTATTGCTCCACTATTTGCTCTTCAGGCACCTGCAAGTGTTATCTCGTGGATTAAGTAAGCCTTGTGAAAGCTCTCTATATATTACTATCCCTTTTTCCCGTTATGATCACATAGATGCATTGATTACCTTCAAGATGCTCAATTTAGTCCTTCTAGAACCAAGTCTGCTATATAACGTTTAAGGCTCTCTATAAGTATCTATGAGCAAGATTTATGACTTATGAGCAATAAGCTCTAACTGGTTATAACTTAAATTTCAGAGGAGAATATGGCATTTGGAGCGCATTTTTGGCACTTCTTGTTCGACTATTCTTCTTTATCCCTGGTATAATCTGTCTCCTGATTTACGTAACTGGATCATCTAATGAATTTAATTACTGGTTATCATTCACTTCATTTCGAAAGGAACTTAGTTCATAGCTGGCTTGAAACTTATTGGTTTGAACCTCATTTTATTCAATTAACTGAAAGCATTCCACTTTGTACAATCCATTGAATGAATATAAAATTCATAGGAAGTCGGATGCTGGATTTTTTTGGATGTAGGTGAACTGGAAATACCATTCATATCATTACTTTTGGTGATTGTGGCCCCATATCAAGTCCAAAACTTAAGGTAAATATTTAAACTCTTAATCAGATTGAACTTTAAAAATTTTCCAATCTCAGCATTTTATTATTCTCTGTCATTGGCAGAGGAACTCAAGAAGGGAGCATCATCTCACTAGTGATTGCAGCATATTTGGCTTTCCAACATTTCTCTCGAGCTGGCAGCTTTCGGAGAGCTTTTGATCAGAATTCAATTGTTGCAACAGTAGCAGTTATTTGTGTTACTGCTGTCTCATTCCTGCTTGTGATCTGAGTTCCTTGGTCACTCCCAAGTAAACCTTATCGTTTAAGTCTTCACTGAACACCACCAGTCTACTTTTAATAGTTATACAACAGTCACGATGTACAGACCTTTCCTTGCTAATAAATGACTATGAAGAAAATTTTCTTTCTTCTTTTTTTGACCAATCATTTAAATTATTTCAAACTTCATTCCCGAGCTTCAATCGGTCAAATATCAATCTTTCAGTTTACAAGGATCATCCAGAAGTTATTATTGTTTGATCCTTCAATTATGAGTGTGCCTTGCCACATTAGTTATCTAGGTCATTAGACAATTATTTAGATTTTGATATCCATCATCTTCTTTCGCATCGTTTTAGTGATCACAAAATTGCATTGGATCGTATCTAGACAATTATTTTTTTTCCTTTTTAAATAATACTGGTCCTAGTTTTATATGCATATTTGTGAACTCGCCTTCTATCAACATTTTGTTGTATAATTTGTAAATTACACAGTGAACAATCTGAAATTCGGCAAAGTTGTCTTTCATTGATAAAACTGAATCAATTCATATGCAAGCCGAAGCCTGTATACAATGCCTCTTCCCTGGAGAACCAACCTAAAAGCTTCCAAGTGGAATTGACTTATCTATATCCTTTTATTGGCTAAAAGCTTCCAAAATGGAATTGACATATCTATATCCTTTTATTGGCTAACAATGTAAAATATCGTTTAGCTAGCATATGACCTATTTATTCTTTAATCTACTGATGTATGTTCCTGTGGACTTAGTTTTCTAATGCATAACTTGATGTATTACAGCAACAACTTGCTATATAATCTTTCTTTAATTGTATTGATGTCTAACAATGCAAAAATGTGCAGCAAATAAGCGATTGCCATCTCTCTGTAGAGAGAAGAAATGAGATTCCTTCTGCTTACAGATGATTTGCCACGAGCGAACCCAAAAGGCAAGTCATGGCAAAGAGCAGCAGTGATCGTTTTGATATTGAAGTGGCTGAGCTGGGCATTCCTGATGGTTCTGCACCATAAATGGATGAATCTGTGGGCGTATATGTCGGGTTTGTGGTGTCTGGCGGTGTCAGTGTTGGCATTGTGCTGGCTGGCGGAGTTGGTGTTGGGATTACAGGCGCCGGCGGTGTTGGGTTTGGGTTTGCTGGTGGAGTGGGGCTGTGACAAGTACATAAAAGAAATTAGTTTTTTTTTTTTTTTTTTTTTTTTGGGTCTTCGCAAAATCATTGCTTGCTTTACTGATTTTCTTTCTTCTTCTACTTTTTTCTCTATTTTTTTTGTGTGTGAATTTTAGTCTCTTAGTGAAATGAATAATGGGCTCTTTAGGAGTTACCTTGGTACAGCTCTGGGTGTTGCATAGTGACAGTTACCATTACCTGCAGTAATATAGAAAAGACAGTCAATAAAAAATTATGAGAGACCAATTCTAAGATTCTATTTGACCTGTAAGCTTTGACTTTGTTAGATATCACTATTTACTACTTGATATTTATCTCTAGATGCCAGATGATAGGATACGATCCTTTTTTGGGAAAATTGTCACTATCAGCAAGTTTCCTTTCACTTTTGTAAGATATCATCTTTGATTCTCCAATAGGAAAGGAGGATGAGAGAGAGAGTAGAGAATTAGGCACAGTCATAAAAGGTTGAATAAAAAGTCGCAGTAGTACAACAAAATGGATTAACTACAAAGGAAAGCACAATTTGTGATTAGAAAAATAGTTCTTAGTACTTTGTAGTGTGGTCAATTTCTATTGGATAAAAACTGTTGGTAGGATTCACAGATTAAGTAGGAACTCTTGTATTCAATAATCCTGTATTAAGCTAAGTTTTGTAGTTCAAAAAATCTCTTAAAATTGTCTACCACTAGTAACAACAGGGGTTAATTATGATTCAGAAAGGTGAAAATTCCATACTTGGGTCTGCATTAACGAGTTGAGCTGTTCCTCCAAAAACGCAGCTTGTAGGTGCTGGATTCTTCTGGTAATAGTCGTTGAAGGCATAAGAAGCGTGGTCCTTGACAGTGTTCGGGTCATAGCAGCTCCCACCTGGCTGAATTGCTGAACAGTCCGCTCCGCCATAGCCACAGGCATAGTCAAGAGCCACCTGCAGAGCAGTTGGGGAAGCAGCAGAGCTTGCAATACACCATGAACCTCC

mRNA sequence

ATGGTTTGTATATCTCTGTCGTCTGCTATTTCTCTTCACAGTCCATCTCTCTACAAGTCCAAGCTCTCCGTCCCTCTCTCTCTAAGATCTTCATCGCCGAATGCAAGGCTCTCGTTCAATCCTGCCGCCAAAAAGAGTTCCATCTGTTACAATCCGCTCAGGTTTGCTGTCGGTAGCGAGGGGATTGCGACGGCGATTCGCAAGAAGAGGAGCCGTGGTTTGAGTGCTGTTTGTTACGCTATGCCTCTTAACGCTCGCACTCTTCAGTGGATCTCCACTATTTCTTCTGTGGTTTTAATGCTCGCAAGGGGGACTGGGATTCAGAAGTCATTTATTGCTCCACTATTTGCTCTTCAGGCACCTGCAAGTGTTATCTCGTGGATTAAAGGAGAATATGGCATTTGGAGCGCATTTTTGGCACTTCTTGTTCGACTATTCTTCTTTATCCCTGGTGAACTGGAAATACCATTCATATCATTACTTTTGGTGATTGTGGCCCCATATCAAGTCCAAAACTTAAGAGGAACTCAAGAAGGGAGCATCATCTCACTAGTGATTGCAGCATATTTGGCTTTCCAACATTTCTCTCGAGCTGGCAGCTTTCGGAGAGCTTTTGATCAGAATTCAATTGTTGCAACAGTAGCAGTTATTTGTGTTACTGCTGTCTCATTCCTGCTTGTGATCTGA

Coding sequence (CDS)

ATGGTTTGTATATCTCTGTCGTCTGCTATTTCTCTTCACAGTCCATCTCTCTACAAGTCCAAGCTCTCCGTCCCTCTCTCTCTAAGATCTTCATCGCCGAATGCAAGGCTCTCGTTCAATCCTGCCGCCAAAAAGAGTTCCATCTGTTACAATCCGCTCAGGTTTGCTGTCGGTAGCGAGGGGATTGCGACGGCGATTCGCAAGAAGAGGAGCCGTGGTTTGAGTGCTGTTTGTTACGCTATGCCTCTTAACGCTCGCACTCTTCAGTGGATCTCCACTATTTCTTCTGTGGTTTTAATGCTCGCAAGGGGGACTGGGATTCAGAAGTCATTTATTGCTCCACTATTTGCTCTTCAGGCACCTGCAAGTGTTATCTCGTGGATTAAAGGAGAATATGGCATTTGGAGCGCATTTTTGGCACTTCTTGTTCGACTATTCTTCTTTATCCCTGGTGAACTGGAAATACCATTCATATCATTACTTTTGGTGATTGTGGCCCCATATCAAGTCCAAAACTTAAGAGGAACTCAAGAAGGGAGCATCATCTCACTAGTGATTGCAGCATATTTGGCTTTCCAACATTTCTCTCGAGCTGGCAGCTTTCGGAGAGCTTTTGATCAGAATTCAATTGTTGCAACAGTAGCAGTTATTTGTGTTACTGCTGTCTCATTCCTGCTTGTGATCTGA

Protein sequence

MVCISLSSAISLHSPSLYKSKLSVPLSLRSSSPNARLSFNPAAKKSSICYNPLRFAVGSEGIATAIRKKRSRGLSAVCYAMPLNARTLQWISTISSVVLMLARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICVTAVSFLLVI

Homology

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BLAST of Spg036681 vs. NCBI nr
Match: XP_038896035.1 (cold-regulated 413 inner membrane protein 1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 386.3 bits (991), Expect = 1.8e-103
Identity = 207/229 (90.39%), Postives = 222/229 (96.94%), Query Frame = 0


Query: 1   MVCISLSSAISLHSPSLYKSKLSVPLSLRSSSPNARLSFNPAAKKSSICYNPLRFAVGSE 60
           MVC+SLSSA+SL++PSLY+SKLSVPLSLRSS PNA+LSF+PAAK+SSICYNPLRFAVGSE
Sbjct: 1   MVCVSLSSAVSLYNPSLYRSKLSVPLSLRSSPPNAKLSFSPAAKQSSICYNPLRFAVGSE 60

Query: 61  GIAT-AIRKKRSRGLSAVCYAMPLNARTLQWISTISSVVLMLARGTGIQKSFIAPLFALQ 120
           GIAT AI KKRSRGLSA+CYAMP+NARTLQWISTISS VLMLA+GTGIQKSFI PLFAL 
Sbjct: 61  GIATAAITKKRSRGLSAICYAMPVNARTLQWISTISSAVLMLAKGTGIQKSFIVPLFALL 120

Query: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180
           APASV+SWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQ+LRGTQEG
Sbjct: 121 APASVVSWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQSLRGTQEG 180

Query: 181 SIISLVIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICVTAVSFLLVI 229
           +IISL+IAAYLAFQHFSRAGSFRRAFDQNSIVATVAVIC TAVSFLLVI
Sbjct: 181 NIISLMIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICFTAVSFLLVI 229

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BLAST of Spg036681 vs. NCBI nr
Match: XP_008443932.1 (PREDICTED: cold-regulated 413 inner membrane protein 2, chloroplastic-like [Cucumis melo] >KAA0057095.1 cold-regulated 413 inner membrane protein 2 [Cucumis melo var. makuwa] >TYK20630.1 cold-regulated 413 inner membrane protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 380.9 bits (977), Expect = 7.5e-102
Identity = 204/229 (89.08%), Postives = 217/229 (94.76%), Query Frame = 0


Query: 1   MVCISLSSAISLHSPSLYKSKLSVPLSLRSSSPNARLSFNPAAKKSSICYNPLRFAVGSE 60
           MVC+SLSSA+SL+ PS YKSKLSVPLSLRSS PNA+LS N AAK+SSICYNPLRFAVGSE
Sbjct: 1   MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60

Query: 61  GIATA-IRKKRSRGLSAVCYAMPLNARTLQWISTISSVVLMLARGTGIQKSFIAPLFALQ 120
           GIATA I KK++RGLSA CYAMP+N RTLQW+STISSVVLMLA+GTGIQKSFI PLFALQ
Sbjct: 61  GIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVLMLAKGTGIQKSFIVPLFALQ 120

Query: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180
           APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG
Sbjct: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180

Query: 181 SIISLVIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICVTAVSFLLVI 229
            IISL+IAAYLAFQHFSRAGSF+RAFDQNSIVATVAVIC+TAVSFL VI
Sbjct: 181 CIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVICITAVSFLFVI 229

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BLAST of Spg036681 vs. NCBI nr
Match: XP_004147401.1 (cold-regulated 413 inner membrane protein 2, chloroplastic [Cucumis sativus] >KGN65572.1 hypothetical protein Csa_019760 [Cucumis sativus])

HSP 1 Score: 375.9 bits (964), Expect = 2.4e-100
Identity = 202/228 (88.60%), Postives = 214/228 (93.86%), Query Frame = 0


Query: 1   MVCISLSSAISLHSPSLYKSKLSVPLSLRSSSPNARLSFNPAAKKSSICYNPLRFAVGSE 60
           MVC+SLSSA+SL+ PS YKSKLSVPLSLRSS PNA+LS N AAK+SSICYNPLRFAVGSE
Sbjct: 1   MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60

Query: 61  GIATAIRKKRSRGLSAVCYAMPLNARTLQWISTISSVVLMLARGTGIQKSFIAPLFALQA 120
           G    I KK+SRGLSAVCYAMP+N RTLQWISTISSVVLMLA+GTGIQKSFI PLFALQA
Sbjct: 61  G----INKKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLFALQA 120

Query: 121 PASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGS 180
           PASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 
Sbjct: 121 PASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGC 180

Query: 181 IISLVIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICVTAVSFLLVI 229
           IISL+IAAYLAFQHFSRAGSF+RAFDQNSIVATVAV+C+TAVSFL VI
Sbjct: 181 IISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI 224

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BLAST of Spg036681 vs. NCBI nr
Match: XP_022994881.1 (cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 369.4 bits (947), Expect = 2.2e-98
Identity = 202/229 (88.21%), Postives = 215/229 (93.89%), Query Frame = 0


Query: 1   MVCISLSSAISLHSPSLYKSKLSVPLSLRSSSPNARLSFNPAAKKSSICYNPLRFAVGSE 60
           MVC+ LSSAISLHSP L+KSKLS PLSLRSS PNA+L+FNPAAK+SSIC NP+RF  GS+
Sbjct: 1   MVCV-LSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSD 60

Query: 61  GIAT-AIRKKRSRGLSAVCYAMPLNARTLQWISTISSVVLMLARGTGIQKSFIAPLFALQ 120
             +T AI KKR RGLSAVCYAMPL+AR LQWISTISSV+LMLARGTGIQKSFI PLFALQ
Sbjct: 61  VSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQ 120

Query: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180
           APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG
Sbjct: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180

Query: 181 SIISLVIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICVTAVSFLLVI 229
           +IISL+IAAYLAFQHFSRAGSFRRAFDQNSIVATVA+ICVTAVSFLLVI
Sbjct: 181 TIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSFLLVI 228

[Close]

BLAST of Spg036681 vs. NCBI nr
Match: XP_022955155.1 (cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 [Cucurbita moschata] >KAG6573346.1 Cold-regulated 413 inner membrane protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012511.1 Cold-regulated inner membrane protein 2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 366.7 bits (940), Expect = 1.5e-97
Identity = 201/229 (87.77%), Postives = 213/229 (93.01%), Query Frame = 0


Query: 1   MVCISLSSAISLHSPSLYKSKLSVPLSLRSSSPNARLSFNPAAKKSSICYNPLRFAVGSE 60
           MVC+ LSSAISLHSP LYKSKLS PLSLRSS PNA+L+FNPAAK+S IC NP+RF  GS+
Sbjct: 1   MVCV-LSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSD 60

Query: 61  GIAT-AIRKKRSRGLSAVCYAMPLNARTLQWISTISSVVLMLARGTGIQKSFIAPLFALQ 120
             +T AI KKR RGLSAVCYAMPL+AR LQWISTISSV+LMLARGTGIQKSFI PLFALQ
Sbjct: 61  VSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQ 120

Query: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180
           APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG
Sbjct: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180

Query: 181 SIISLVIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICVTAVSFLLVI 229
           +IISL+IAAYLAFQHFSRAGSFRRAFDQNSIVATVA+ICVTAVS LLVI
Sbjct: 181 TIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI 228

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BLAST of Spg036681 vs. ExPASy Swiss-Prot
Match: Q94AL8 (Cold-regulated 413 inner membrane protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=COR413IM1 PE=1 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.5e-60
Identity = 126/230 (54.78%), Postives = 169/230 (73.48%), Query Frame = 0


Query: 2   VCISLSSAISLHSPSLYKSKLSVPLSLRSSSPNARLSFNPAAKKSSICYNPLRFAVGSE- 61
           +C+S S  +SLH    +       LSL+  S  + LS       S +C+NPLR +   + 
Sbjct: 4   LCLSSSRIVSLHHQKPF-------LSLKLRSRPSDLS-GLGRHTSPVCFNPLRLSGDRQR 63

Query: 62  --GIATAIRKKRSRGLSAVCYAMPLNARTLQWISTISSVVLMLARGTGIQKSFIAPLFAL 121
              ++T + K+R RG S VCYA P++A +LQWISTIS + LMLARGTGI KS + PLFAL
Sbjct: 64  TATVSTRVEKRRKRGSSVVCYAAPISANSLQWISTISCLALMLARGTGIHKSVVVPLFAL 123

Query: 122 QAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQE 181
            AP+S+++WIKGEYG+W+AFLAL+ RLFF  PGELE+PFI+LLLVIVAPYQV N+RG QE
Sbjct: 124 HAPSSIVAWIKGEYGVWAAFLALIARLFFTFPGELELPFIALLLVIVAPYQVMNIRGKQE 183

Query: 182 GSIISLVIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICVTAVSFLLVI 229
           G+II++ I+ +LAFQHFSRAGS  +A+++ S++ATVA+I VT VS LL++
Sbjct: 184 GAIIAIAISGFLAFQHFSRAGSLEKAYEKGSVLATVAIIGVTVVSLLLLL 225

[Close]

BLAST of Spg036681 vs. ExPASy Swiss-Prot
Match: F4I1G5 (Cold-regulated 413 inner membrane protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=COR413IM2 PE=1 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 7.3e-60
Identity = 132/231 (57.14%), Postives = 162/231 (70.13%), Query Frame = 0


Query: 2   VCISLSSAISLHSPSLYKSKLSVPLSLRSSSPNARLSFNPAAKKSSICYNPLRFAVGSEG 61
           +C+S S  +SLH       K  + L LR    N           S +C+NPLR +   + 
Sbjct: 4   LCLSSSRIVSLH-----HQKPFLALKLRPRPSNIS---GLGHSTSVVCFNPLRLSADRQR 63

Query: 62  IATA---IRKKRSRGLSAVCYAMP-LNARTLQWISTISSVVLMLARGTGIQKSFIAPLFA 121
            AT      K+R RG S VCYA P L+   LQWISTIS V LM ARGTGI KSF+ PLFA
Sbjct: 64  TATVSARAEKRRKRGSSVVCYATPMLSVHNLQWISTISCVALMFARGTGIHKSFVVPLFA 123

Query: 122 LQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQ 181
           LQAP  ++SW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV ++RG Q
Sbjct: 124 LQAPMGIVSWMKGEYGIWAAFLALLTRLFFSFPVELELPFIALLLVIVAPYQVMSIRGKQ 183

Query: 182 EGSIISLVIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICVTAVSFLLVI 229
           EG+I+SL I+ +LAFQHFSRAG+ ++AFDQNS++ATVA+I VT VSFL +I
Sbjct: 184 EGAILSLAISCFLAFQHFSRAGTLQKAFDQNSVLATVAIIGVTVVSFLFLI 226

[Close]

BLAST of Spg036681 vs. ExPASy Swiss-Prot
Match: O23164 (Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana OX=3702 GN=At4g37220 PE=2 SV=2)

HSP 1 Score: 73.2 bits (178), Expect = 4.4e-12
Identity = 45/140 (32.14%), Postives = 78/140 (55.71%), Query Frame = 0


Query: 88  LQWISTISSVVLMLARGTG----IQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLV 147
           LQW ++I ++ L++   T     +  + + P      P+ +  +  G++G W A +A++V
Sbjct: 50  LQWAASIFAIYLLILDRTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIAIIV 109

Query: 148 RLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGSIISLVIAAYLAFQHFSRAGS 207
           RLFF    P  LEIP   +L+V+V+P  +   LR +  G++I LVIA YL  +H   +G 
Sbjct: 110 RLFFPKEFPEWLEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKASGG 169

Query: 208 FRRAFDQ-NSIVATVAVICV 220
           F+ +F Q N I  T+ ++ +
Sbjct: 170 FKNSFTQKNGISNTIGIVAL 189

[Close]

BLAST of Spg036681 vs. ExPASy Swiss-Prot
Match: Q9SVL6 (Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana OX=3702 GN=COR413PM2 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-11
Identity = 41/127 (32.28%), Postives = 76/127 (59.84%), Query Frame = 0


Query: 88  LQWISTISSVVLMLARGTG----IQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLV 147
           L+++++ +++ L++   T     +  S + P   L  P+ + +++ G+ G W AF+A+++
Sbjct: 51  LKFLASFAAIYLLILDRTNWKTKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVL 110

Query: 148 RLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGSIISLVIAAYLAFQHFSRAGS 207
           RLFF    P  LE+P   +LL++V+P +   ++RGT  G++ISL I  YL  +H   +G 
Sbjct: 111 RLFFPKHFPDWLEMPGSLILLLVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRASGG 170

[Close]

BLAST of Spg036681 vs. ExPASy Swiss-Prot
Match: Q9XIM7 (Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana OX=3702 GN=COR413PM1 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.4e-10
Identity = 51/178 (28.65%), Postives = 85/178 (47.75%), Query Frame = 0


Query: 50  YNPLRFAVGSEGIATAIRKKRSRGLSAVCYAMPLNARTLQWISTISSVVLMLAR----GT 109
           +  L+  +GS+     I  K     +     +      L+W+++I+++ L++       T
Sbjct: 10  HGTLKAMIGSDFNELTIAAKNLATHAFTLTGLGFGTSVLEWVASIAAIYLLVLDRTNWKT 69

Query: 110 GIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLV 169
            +  S + P      P+ +    +GE G W AF+A++V+LFF       LE+P   +LL 
Sbjct: 70  NMLTSLLIPYIFFSLPSLIFGIFRGEIGKWIAFVAVVVQLFFPKHAREYLELPVALVLLA 129

Query: 170 IVAPYQVQ-NLRGTQEGSIISLVIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAVICV 220
           +VAP  +    R +  G  I L I  YL  +H   +G FR AF + N I  TV +IC+
Sbjct: 130 VVAPNLIAGTFRDSWIGLAICLGIGCYLLQEHIRASGGFRNAFTKANGISNTVGIICL 187

[Close]

BLAST of Spg036681 vs. ExPASy TrEMBL
Match: A0A5D3DB21 (Cold-regulated 413 inner membrane protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00120 PE=3 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 3.6e-102
Identity = 204/229 (89.08%), Postives = 217/229 (94.76%), Query Frame = 0


Query: 1   MVCISLSSAISLHSPSLYKSKLSVPLSLRSSSPNARLSFNPAAKKSSICYNPLRFAVGSE 60
           MVC+SLSSA+SL+ PS YKSKLSVPLSLRSS PNA+LS N AAK+SSICYNPLRFAVGSE
Sbjct: 1   MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60

Query: 61  GIATA-IRKKRSRGLSAVCYAMPLNARTLQWISTISSVVLMLARGTGIQKSFIAPLFALQ 120
           GIATA I KK++RGLSA CYAMP+N RTLQW+STISSVVLMLA+GTGIQKSFI PLFALQ
Sbjct: 61  GIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVLMLAKGTGIQKSFIVPLFALQ 120

Query: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180
           APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG
Sbjct: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180

Query: 181 SIISLVIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICVTAVSFLLVI 229
            IISL+IAAYLAFQHFSRAGSF+RAFDQNSIVATVAVIC+TAVSFL VI
Sbjct: 181 CIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVICITAVSFLFVI 229

[Close]

BLAST of Spg036681 vs. ExPASy TrEMBL
Match: A0A1S3B961 (cold-regulated 413 inner membrane protein 2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103487404 PE=3 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 3.6e-102
Identity = 204/229 (89.08%), Postives = 217/229 (94.76%), Query Frame = 0


Query: 1   MVCISLSSAISLHSPSLYKSKLSVPLSLRSSSPNARLSFNPAAKKSSICYNPLRFAVGSE 60
           MVC+SLSSA+SL+ PS YKSKLSVPLSLRSS PNA+LS N AAK+SSICYNPLRFAVGSE
Sbjct: 1   MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60

Query: 61  GIATA-IRKKRSRGLSAVCYAMPLNARTLQWISTISSVVLMLARGTGIQKSFIAPLFALQ 120
           GIATA I KK++RGLSA CYAMP+N RTLQW+STISSVVLMLA+GTGIQKSFI PLFALQ
Sbjct: 61  GIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVLMLAKGTGIQKSFIVPLFALQ 120

Query: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180
           APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG
Sbjct: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180

Query: 181 SIISLVIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICVTAVSFLLVI 229
            IISL+IAAYLAFQHFSRAGSF+RAFDQNSIVATVAVIC+TAVSFL VI
Sbjct: 181 CIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVICITAVSFLFVI 229

[Close]

BLAST of Spg036681 vs. ExPASy TrEMBL
Match: A0A0A0LXM7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G459500 PE=3 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.2e-100
Identity = 202/228 (88.60%), Postives = 214/228 (93.86%), Query Frame = 0


Query: 1   MVCISLSSAISLHSPSLYKSKLSVPLSLRSSSPNARLSFNPAAKKSSICYNPLRFAVGSE 60
           MVC+SLSSA+SL+ PS YKSKLSVPLSLRSS PNA+LS N AAK+SSICYNPLRFAVGSE
Sbjct: 1   MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60

Query: 61  GIATAIRKKRSRGLSAVCYAMPLNARTLQWISTISSVVLMLARGTGIQKSFIAPLFALQA 120
           G    I KK+SRGLSAVCYAMP+N RTLQWISTISSVVLMLA+GTGIQKSFI PLFALQA
Sbjct: 61  G----INKKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLFALQA 120

Query: 121 PASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGS 180
           PASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 
Sbjct: 121 PASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGC 180

Query: 181 IISLVIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICVTAVSFLLVI 229
           IISL+IAAYLAFQHFSRAGSF+RAFDQNSIVATVAV+C+TAVSFL VI
Sbjct: 181 IISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI 224

[Close]

BLAST of Spg036681 vs. ExPASy TrEMBL
Match: A0A6J1K0I6 (cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490472 PE=3 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 1.1e-98
Identity = 202/229 (88.21%), Postives = 215/229 (93.89%), Query Frame = 0


Query: 1   MVCISLSSAISLHSPSLYKSKLSVPLSLRSSSPNARLSFNPAAKKSSICYNPLRFAVGSE 60
           MVC+ LSSAISLHSP L+KSKLS PLSLRSS PNA+L+FNPAAK+SSIC NP+RF  GS+
Sbjct: 1   MVCV-LSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSD 60

Query: 61  GIAT-AIRKKRSRGLSAVCYAMPLNARTLQWISTISSVVLMLARGTGIQKSFIAPLFALQ 120
             +T AI KKR RGLSAVCYAMPL+AR LQWISTISSV+LMLARGTGIQKSFI PLFALQ
Sbjct: 61  VSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQ 120

Query: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180
           APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG
Sbjct: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180

Query: 181 SIISLVIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICVTAVSFLLVI 229
           +IISL+IAAYLAFQHFSRAGSFRRAFDQNSIVATVA+ICVTAVSFLLVI
Sbjct: 181 TIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSFLLVI 228

[Close]

BLAST of Spg036681 vs. ExPASy TrEMBL
Match: A0A6J1GUE0 (cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457204 PE=3 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 7.0e-98
Identity = 201/229 (87.77%), Postives = 213/229 (93.01%), Query Frame = 0


Query: 1   MVCISLSSAISLHSPSLYKSKLSVPLSLRSSSPNARLSFNPAAKKSSICYNPLRFAVGSE 60
           MVC+ LSSAISLHSP LYKSKLS PLSLRSS PNA+L+FNPAAK+S IC NP+RF  GS+
Sbjct: 1   MVCV-LSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSD 60

Query: 61  GIAT-AIRKKRSRGLSAVCYAMPLNARTLQWISTISSVVLMLARGTGIQKSFIAPLFALQ 120
             +T AI KKR RGLSAVCYAMPL+AR LQWISTISSV+LMLARGTGIQKSFI PLFALQ
Sbjct: 61  VSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQ 120

Query: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180
           APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG
Sbjct: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180

Query: 181 SIISLVIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICVTAVSFLLVI 229
           +IISL+IAAYLAFQHFSRAGSFRRAFDQNSIVATVA+ICVTAVS LLVI
Sbjct: 181 TIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI 228

[Close]

BLAST of Spg036681 vs. TAIR 10
Match: AT1G29395.1 (COLD REGULATED 314 INNER MEMBRANE 1 )

HSP 1 Score: 233.4 bits (594), Expect = 1.8e-61
Identity = 126/230 (54.78%), Postives = 169/230 (73.48%), Query Frame = 0


Query: 2   VCISLSSAISLHSPSLYKSKLSVPLSLRSSSPNARLSFNPAAKKSSICYNPLRFAVGSE- 61
           +C+S S  +SLH    +       LSL+  S  + LS       S +C+NPLR +   + 
Sbjct: 4   LCLSSSRIVSLHHQKPF-------LSLKLRSRPSDLS-GLGRHTSPVCFNPLRLSGDRQR 63

Query: 62  --GIATAIRKKRSRGLSAVCYAMPLNARTLQWISTISSVVLMLARGTGIQKSFIAPLFAL 121
              ++T + K+R RG S VCYA P++A +LQWISTIS + LMLARGTGI KS + PLFAL
Sbjct: 64  TATVSTRVEKRRKRGSSVVCYAAPISANSLQWISTISCLALMLARGTGIHKSVVVPLFAL 123

Query: 122 QAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQE 181
            AP+S+++WIKGEYG+W+AFLAL+ RLFF  PGELE+PFI+LLLVIVAPYQV N+RG QE
Sbjct: 124 HAPSSIVAWIKGEYGVWAAFLALIARLFFTFPGELELPFIALLLVIVAPYQVMNIRGKQE 183

Query: 182 GSIISLVIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICVTAVSFLLVI 229
           G+II++ I+ +LAFQHFSRAGS  +A+++ S++ATVA+I VT VS LL++
Sbjct: 184 GAIIAIAISGFLAFQHFSRAGSLEKAYEKGSVLATVAIIGVTVVSLLLLL 225

[Close]

BLAST of Spg036681 vs. TAIR 10
Match: AT1G29390.1 (cold regulated 314 thylakoid membrane 2 )

HSP 1 Score: 231.9 bits (590), Expect = 5.2e-61
Identity = 132/231 (57.14%), Postives = 162/231 (70.13%), Query Frame = 0


Query: 2   VCISLSSAISLHSPSLYKSKLSVPLSLRSSSPNARLSFNPAAKKSSICYNPLRFAVGSEG 61
           +C+S S  +SLH       K  + L LR    N           S +C+NPLR +   + 
Sbjct: 4   LCLSSSRIVSLH-----HQKPFLALKLRPRPSNIS---GLGHSTSVVCFNPLRLSADRQR 63

Query: 62  IATA---IRKKRSRGLSAVCYAMP-LNARTLQWISTISSVVLMLARGTGIQKSFIAPLFA 121
            AT      K+R RG S VCYA P L+   LQWISTIS V LM ARGTGI KSF+ PLFA
Sbjct: 64  TATVSARAEKRRKRGSSVVCYATPMLSVHNLQWISTISCVALMFARGTGIHKSFVVPLFA 123

Query: 122 LQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQ 181
           LQAP  ++SW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV ++RG Q
Sbjct: 124 LQAPMGIVSWMKGEYGIWAAFLALLTRLFFSFPVELELPFIALLLVIVAPYQVMSIRGKQ 183

Query: 182 EGSIISLVIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICVTAVSFLLVI 229
           EG+I+SL I+ +LAFQHFSRAG+ ++AFDQNS++ATVA+I VT VSFL +I
Sbjct: 184 EGAILSLAISCFLAFQHFSRAGTLQKAFDQNSVLATVAIIGVTVVSFLFLI 226

[Close]

BLAST of Spg036681 vs. TAIR 10
Match: AT1G29390.2 (cold regulated 314 thylakoid membrane 2 )

HSP 1 Score: 221.1 bits (562), Expect = 9.2e-58
Identity = 113/168 (67.26%), Postives = 137/168 (81.55%), Query Frame = 0


Query: 62  IATAIRKKRSRGLSAVCYAMP-LNARTLQWISTISSVVLMLARGTGIQKSFIAPLFALQA 121
           ++    K+R RG S VCYA P L+   LQWISTIS V LM ARGTGI KSF+ PLFALQA
Sbjct: 16  VSARAEKRRKRGSSVVCYATPMLSVHNLQWISTISCVALMFARGTGIHKSFVVPLFALQA 75

Query: 122 PASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGS 181
           P  ++SW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV ++RG QEG+
Sbjct: 76  PMGIVSWMKGEYGIWAAFLALLTRLFFSFPVELELPFIALLLVIVAPYQVMSIRGKQEGA 135

Query: 182 IISLVIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICVTAVSFLLVI 229
           I+SL I+ +LAFQHFSRAG+ ++AFDQNS++ATVA+I VT VSFL +I
Sbjct: 136 ILSLAISCFLAFQHFSRAGTLQKAFDQNSVLATVAIIGVTVVSFLFLI 183

[Close]

BLAST of Spg036681 vs. TAIR 10
Match: AT4G37220.1 (Cold acclimation protein WCOR413 family )

HSP 1 Score: 73.2 bits (178), Expect = 3.1e-13
Identity = 45/140 (32.14%), Postives = 78/140 (55.71%), Query Frame = 0


Query: 88  LQWISTISSVVLMLARGTG----IQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLV 147
           LQW ++I ++ L++   T     +  + + P      P+ +  +  G++G W A +A++V
Sbjct: 50  LQWAASIFAIYLLILDRTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIAIIV 109

Query: 148 RLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGSIISLVIAAYLAFQHFSRAGS 207
           RLFF    P  LEIP   +L+V+V+P  +   LR +  G++I LVIA YL  +H   +G 
Sbjct: 110 RLFFPKEFPEWLEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKASGG 169

Query: 208 FRRAFDQ-NSIVATVAVICV 220
           F+ +F Q N I  T+ ++ +
Sbjct: 170 FKNSFTQKNGISNTIGIVAL 189

[Close]

BLAST of Spg036681 vs. TAIR 10
Match: AT3G50830.1 (cold-regulated 413-plasma membrane 2 )

HSP 1 Score: 71.6 bits (174), Expect = 9.0e-13
Identity = 41/127 (32.28%), Postives = 76/127 (59.84%), Query Frame = 0


Query: 88  LQWISTISSVVLMLARGTG----IQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLV 147
           L+++++ +++ L++   T     +  S + P   L  P+ + +++ G+ G W AF+A+++
Sbjct: 51  LKFLASFAAIYLLILDRTNWKTKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVL 110

Query: 148 RLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGSIISLVIAAYLAFQHFSRAGS 207
           RLFF    P  LE+P   +LL++V+P +   ++RGT  G++ISL I  YL  +H   +G 
Sbjct: 111 RLFFPKHFPDWLEMPGSLILLLVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRASGG 170

The following BLAST results are available for this feature:

BLAST of Spg036681 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896035.1	1.8e-103	90.39	cold-regulated 413 inner membrane protein 1, chloroplastic-like [Benincasa hispi...	[more]
XP_008443932.1	7.5e-102	89.08	PREDICTED: cold-regulated 413 inner membrane protein 2, chloroplastic-like [Cucu...	[more]
XP_004147401.1	2.4e-100	88.60	cold-regulated 413 inner membrane protein 2, chloroplastic [Cucumis sativus] >KG...	[more]
XP_022994881.1	2.2e-98	88.21	cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 [Cucu...	[more]
XP_022955155.1	1.5e-97	87.77	cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 [Cucu...	[more]

BLAST of Spg036681 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AL8	2.5e-60	54.78	Cold-regulated 413 inner membrane protein 1, chloroplastic OS=Arabidopsis thalia...	[more]
F4I1G5	7.3e-60	57.14	Cold-regulated 413 inner membrane protein 2, chloroplastic OS=Arabidopsis thalia...	[more]
O23164	4.4e-12	32.14	Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9SVL6	1.3e-11	32.28	Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9XIM7	2.4e-10	28.65	Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of Spg036681 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DB21	3.6e-102	89.08	Cold-regulated 413 inner membrane protein 2 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3B961	3.6e-102	89.08	cold-regulated 413 inner membrane protein 2, chloroplastic-like OS=Cucumis melo ...	[more]
A0A0A0LXM7	1.2e-100	88.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G459500 PE=3 SV=1	[more]
A0A6J1K0I6	1.1e-98	88.21	cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 OS=Cu...	[more]
A0A6J1GUE0	7.0e-98	87.77	cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 OS=Cu...	[more]

BLAST of Spg036681 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29395.1	1.8e-61	54.78	COLD REGULATED 314 INNER MEMBRANE 1	[more]
AT1G29390.1	5.2e-61	57.14	cold regulated 314 thylakoid membrane 2	[more]
AT1G29390.2	9.2e-58	67.26	cold regulated 314 thylakoid membrane 2	[more]
AT4G37220.1	3.1e-13	32.14	Cold acclimation protein WCOR413 family	[more]
AT3G50830.1	9.0e-13	32.28	cold-regulated 413-plasma membrane 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008892	Cold-regulated 413 protein	PFAM	PF05562	WCOR413	coord: 62..219 e-value: 1.5E-52 score: 178.2
IPR008892	Cold-regulated 413 protein	PANTHER	PTHR33596	COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2	coord: 13..228
None	No IPR available	PANTHER	PTHR33596:SF17	COLD-REGULATED 413 INNER MEMBRANE PROTEIN 1, CHLOROPLASTIC-RELATED	coord: 13..228

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg036681.1	Spg036681.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane