Spg036492 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg036492
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein LOL2
Location	scaffold5: 41714832 .. 41718761 (+)
RNA-Seq Expression	Spg036492
Synteny	Spg036492

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTTCATGAAATTGAGAAAGACGAAGATGACGGACCTCCTCCTGGATGGGAATCTATCACTCCGCCGCTGCCGCCACCACCACCGCCGCCACTTTCTTGTGAGTGCTTCCCAGGTTTATTTCAGATCTTCCGATGATTATACTTCGTCTTCTATCCGATATCCTTCTGATACCTATTTGGTATTCTGTCCTTAGAATCGAAGAAATTATATGATTACATACGATAAGTTGGATATTTGCTGCGGTACCGTGTTAGACTTGTCGCCCCTCTCTCTCGAATTATCAACTCCTACTCGAATTTAGTTCTCTTTGTTGGTTTGCTAAACTAGTTGTGTTTTCGAATCTTCATCATCTTGGTTCTGAGATTCGAAGCGTCTAATTATTTACCGGTTCTTGATACATGTGATCAATTTTTGCACATTGTTTTCCGTGTTCATGTTTGTGAGCGAATCGATTTGATGGTTCTTCCAATTACTTACAGTGGTGAGAAAGTCAACCAAATTTAGCAGCAAAAATCTTTTTGGAATTGGTTCAATTCCAATCTGTGCGCTATTAATCCACTTAGACAATTATAGTTCACACGTAGATTCAGTTCATCGAATTGATGTTAATTCGGCAAAAGTGGATAGGAGTTAGAGCCTTTGTATTTGCATGTTTTACTGCATGTCCCAAATATCGTCATTGGATGTGTTCAGAATCTTCTCACTGGAGACGTTTTGATCTGCAGCTGATATGGCACAAATGGTCTGTGGTTCCTGCCGTCGCCTGCTTAAGTATTTAAAGGGAGCCAGATATGTTCAGTGCTCTTGCTGTTCAACAGTCAACTATGTGTTAGAAGGTTCTGTCTCTTTTCCTTCTTTCTTTTTAGTTTGTACTATTCCTTTCTTCATTAAAAGTTGTCTTGTTCATATGCTGTTAGCTTTTAGCTAATTTTTAAGAAGATCCCACGTATATTAGTTTCAAAGTGCCATTAGCACTTCCCAAACTTTATGCTCTTCATATCTATTTTCTTCCTGCTGCGTCCTCTTTATTAGAGGGTTGTTCGACAGTATTTTCGAGTATCTGTTTTTTGTGGTAGTGCTTGGGTGGTGCTTTCTTTTGACCTATATGTAATAATTGAGGAAATTGGTTATACTGGTAATGATTTACATTATGTGATTGTGCCTCCAAACATCTATGCTCTACATAAAACCAAATGTTGTAGGATCTACGATGTTTCTCAAATGGGGTGTAGATGAATTTAGGTGGTTCCACAGATTGAAATCTGAATCATTTTCCCCCATTCCGGCATTCAATGTATCCACACCCTTATTGTAGGCTTGGAGCGACCAAGTACAGTTGTCGAGTTCCAGCGTCTTAGCCTTGAGATGACCCAACACTGCACAAAGTTTATAATTCAATAATTGTCTATAGCCTGAAATTCAAATGATCATTAGTTTTTTCTTTTCCTTTATTTTGTCAATACATGCACGTAGTTGAAACTTGAAAGCAAATTTTGCCCTGCCAGAAGGGTTTCTACTACCACTATGTGCGTCTAATTGTCCAAGTATTCTGTCCTGCCCGTTTTATCCATCAATTAGATAGGTACTCCATCATAGACTGATTGAAATTTGTAGAATTGAGCAGATGGGATTAGATTAGAGCCTGATTCTACATGTCAACTCTAATTTCCTGGAATTGGGATCAGGGGATGTAATTGTGAGGCCCTCGATTATTCATACTTATGCTAGGAGGGCAATCTTGGGAAAGGGCAGAAAAACAGTTAGAGAGGGGACCACTAAGGGACGTATGTGGGAGTGCGGGTTATCTAAGGGAAGGTTGACAGGGAGTGAGATAGGGAAATTTTTGGGCTTAGACAGTAAGGTCAGGGAGGAGAGAACCGGCTCTCTCAAATAGGTGGGTGGCTGTTTCCTTTGTTCCTTTGTTCCTTTGTTATCAATATATCTTGGCTGAATTACCCTTCTCCATTGAAGAACTCTCAATAGAACAGGACTGGTTTATTTCCATTATCTTGTTTGTGTGTTATTTGGAGTTTCTTGCAGGTTATTTGAGTTAGATACCTGACAGTAATCAATCATTTCTGGAATCTATTGAAAAAAATGTAATTCATATTTAGAAGAAAAATACTTCAGCATAAAATTTCTTTGGCAGTTCAAGTCTGTCTATCTTGTTTCAAAAAGTCCACGTCTGATCCCAATTCCCAAGCCTCAGATTTTGGAGGCAGTTCAAGTTTATCTATTTATGTCGTTTTTTCATAATTCACTATTCAATATCAACTTAATAGATTCAGTCTTTCCAACGATTTGCTAGCAAGCTCTTATAACACAACTCTTCCTTTTCTTTTATTAACACCTCTGCATTCTCTTTCCAGCTCACGAGGTTGGACAAGTTAAATGTGGTTCTTGTGCAGTGTTGCTTATGTACCCGTATGGAGCATCGTCAGTTAGGTGTTCCTCATGTACTAGTGTGACAGAAATCGGGGTATGTGAAGCCACTTTCTGGTTGTCTCATTCATTCACCATGTTAAAGCATGATTTGCTGCAAACTTGATATTTGTTTAATCATTGGGTGAAAACTTTGTGCCCTTTCTAAAGTAAACACAGATGCATAAAGCATGAATCTTGTGAAGCTAATCCTCTCCATCACTCCATGTTTTGGGCCGTTGCCCACAGTGTAACTGCTGTAATTTCCATTGCCAAGCATCATGGAGCAGGCGCTATTTCTAGTGTTCTTGATGGATGAAATTATATCGTAACGTGCAATGTGGATCAAAATAGTCGGTTAACAAATTCATGCCAATTTGACAGCATTAAAACTCATTCTCTCTCTCTGAACAAATATATCTATATATTATGCGGATCTTTATTATGCTTTTGTTGCGAGTTTTTCATATTCAATAGAAATAAAGGTGTTGGTTAGGGTATTTTGCACTGTTTCTTATTATTTTATTAATTGTATAAATGAGAAATTACGATCATAAATTTTGGCCTCTGACAGCTTGGTCTGTGCAGGTGCATAACAGGCGCCCACCATGGTCTGTTCAGCAGGGGCAAGCAGCTCCTCCTACCAACTTTGTTCAGTAGAATCTATGAGAGATGCTTCTGCTTAGGAAAAGATCTGGCATTTTCTGAAATTTGTTTTCCTTTGCAGCCTTCATCAGCACGCAGATAAGGAAAATAACATTAGCATTACTGTTTATTTCTTAGGTAAAGAAACATAGGAATTGACCTTCCCAACTTCTAACATGTTCTTGTCTCAAGTTTGACTTTCTTTGCCTGGCGACTTGACTTCCTGCATATGTTCATTTTTTATGCTGCTGATTGGAGCCTTATTTGGTGCTTGCCCATATCTGAAGTGTTCTTCATTGTAAATGATCGTCTCACTAATTTAAAGCAGCGCAATATAGTCATTGAGGAAATTGATCAAAACAGCTGTCTATGAACTAAATTTGGTTTCAATTCTAGAATTCTGGCTTTTCTCAGCCGCAGGATTTGGTGTTCAATGAACGGAATCTTGGGAACAAGTGTACTTGATAGTTGATTTCGTCTCGCACATAACTGAAATAAATTTGGTTGATGGAAGAAAGTGCAAGGTAGGACCTCTGCTCTCAAGACATTTGGGCCGGTTTCATTTGTGAAGTCAGAAGTGTTATTTGTTTTTATAAAATCCTATGTTGAACGGTTTTTAGTTCAACAATTGCGAGATAGGAGATCGAACCATCGACTTTTGAGATGACAATAGATGTTTTATTTACTAAGTTACGCTCTGATTAGTTTGGAGGCCATTTTTAATTGTTGTGGAAATTTTAAATTGGCTTAATTTTAGGTACTAAGGCTGCGGCTTAAGTTTAATGAGACAAGTGTTCGACCATTTGTCTTTTATATGTTTGTTTGCGGATCTTCTGAGATCATGATTTTAAATTTTCC

mRNA sequence

ATGGAAGTTCATGAAATTGAGAAAGACGAAGATGACGGACCTCCTCCTGGATGGGAATCTATCACTCCGCCGCTGCCGCCACCACCACCGCCGCCACTTTCTTGTGAGTGCTTCCCAGCTGATATGGCACAAATGGTCTGTGGTTCCTGCCGTCGCCTGCTTAAGTATTTAAAGGGAGCCAGATATGTTCAGTGCTCTTGCTGTTCAACAGTCAACTATGTGTTAGAAGGTTCTAGGGTTGTTCGACAGTATTTTCGAGTATCTGTTTTTTGTGGTAGTGCTTGGGTGGTGCTTTCTTTTGACCTATATGTAATAATTGAGGAAATTGGTTATACTGGGGATGTAATTGTGAGGCCCTCGATTATTCATACTTATGCTAGGAGGGCAATCTTGGGAAAGGGCAGAAAAACAGTTAGAGAGGGGACCACTAAGGGACGTATGTGGGAGTGCGGGTTATCTAAGGGAAGGTTGACAGGGAGTGAGATAGGGAAATTTTTGGGCTTAGACACTCACGAGGTTGGACAAGTTAAATGTGGTTCTTGTGCAGTGTTGCTTATGTACCCGTATGGAGCATCGTCAGTTAGGTGTTCCTCATGTACTAGTGTGACAGAAATCGGGGTGCATAACAGGCGCCCACCATGGTCTGTTCAGCAGGGGCAAGCAGCTCCTCCTACCAACTTTGTTCAGTAG

Coding sequence (CDS)

ATGGAAGTTCATGAAATTGAGAAAGACGAAGATGACGGACCTCCTCCTGGATGGGAATCTATCACTCCGCCGCTGCCGCCACCACCACCGCCGCCACTTTCTTGTGAGTGCTTCCCAGCTGATATGGCACAAATGGTCTGTGGTTCCTGCCGTCGCCTGCTTAAGTATTTAAAGGGAGCCAGATATGTTCAGTGCTCTTGCTGTTCAACAGTCAACTATGTGTTAGAAGGTTCTAGGGTTGTTCGACAGTATTTTCGAGTATCTGTTTTTTGTGGTAGTGCTTGGGTGGTGCTTTCTTTTGACCTATATGTAATAATTGAGGAAATTGGTTATACTGGGGATGTAATTGTGAGGCCCTCGATTATTCATACTTATGCTAGGAGGGCAATCTTGGGAAAGGGCAGAAAAACAGTTAGAGAGGGGACCACTAAGGGACGTATGTGGGAGTGCGGGTTATCTAAGGGAAGGTTGACAGGGAGTGAGATAGGGAAATTTTTGGGCTTAGACACTCACGAGGTTGGACAAGTTAAATGTGGTTCTTGTGCAGTGTTGCTTATGTACCCGTATGGAGCATCGTCAGTTAGGTGTTCCTCATGTACTAGTGTGACAGAAATCGGGGTGCATAACAGGCGCCCACCATGGTCTGTTCAGCAGGGGCAAGCAGCTCCTCCTACCAACTTTGTTCAGTAG

Protein sequence

MEVHEIEKDEDDGPPPGWESITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEGSRVVRQYFRVSVFCGSAWVVLSFDLYVIIEEIGYTGDVIVRPSIIHTYARRAILGKGRKTVREGTTKGRMWECGLSKGRLTGSEIGKFLGLDTHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIGVHNRRPPWSVQQGQAAPPTNFVQ

Homology

[Close]

BLAST of Spg036492 vs. NCBI nr
Match: XP_022927005.1 (protein LOL2 [Cucurbita moschata] >XP_023519123.1 protein LOL2 [Cucurbita pepo subsp. pepo] >KAG6583998.1 Protein LOL2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019620.1 Protein LOL2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 213.0 bits (541), Expect = 2.7e-51
Identity = 122/229 (53.28%), Postives = 125/229 (54.59%), Query Frame = 0


Query: 1   MEVHEIEKDEDDGPPPGWESITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGA 60
           ME+HEIEKDEDDGPPPGWE ITPPLP PPP PLS     +DMAQMVCG+CRRLLKYLKGA
Sbjct: 1   MEIHEIEKDEDDGPPPGWEPITPPLPQPPPQPLS-----SDMAQMVCGTCRRLLKYLKGA 60

Query: 61  RYVQCSCCSTVNYVLEGSRVVRQYFRVSVFCGSAWVVLSFDLYVIIEEIGYTGDVIVRPS 120
           RYVQCSCCSTVNYVLE                                            
Sbjct: 61  RYVQCSCCSTVNYVLE-------------------------------------------- 120

Query: 121 IIHTYARRAILGKGRKTVREGTTKGRMWECGLSKGRLTGSEIGKFLGLDTHEVGQVKCGS 180
                                                             HEVGQVKCGS
Sbjct: 121 -------------------------------------------------AHEVGQVKCGS 131

Query: 181 CAVLLMYPYGASSVRCSSCTSVTEIGVHNRRPPWSVQQGQAAPPTNFVQ 230
           CAVLLMYPYGASSVRCSSCT VTEIGVHNRRPPWSVQQGQAAPPTN VQ
Sbjct: 181 CAVLLMYPYGASSVRCSSCTCVTEIGVHNRRPPWSVQQGQAAPPTNSVQ 131

[Close]

BLAST of Spg036492 vs. NCBI nr
Match: XP_011653178.1 (protein LOL2 isoform X1 [Cucumis sativus])

HSP 1 Score: 210.7 bits (535), Expect = 1.3e-50
Identity = 122/229 (53.28%), Postives = 125/229 (54.59%), Query Frame = 0


Query: 1   MEVHEIEKDEDDGPPPGWESITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGA 60
           M+VHEIEKDEDDGPPPGWE ITP LP PPPP LS     ADMAQMVCG+CRRLLKYLKGA
Sbjct: 1   MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLS----SADMAQMVCGTCRRLLKYLKGA 60

Query: 61  RYVQCSCCSTVNYVLEGSRVVRQYFRVSVFCGSAWVVLSFDLYVIIEEIGYTGDVIVRPS 120
           RYVQCSCCSTVN+VLE                                            
Sbjct: 61  RYVQCSCCSTVNFVLE-------------------------------------------- 120

Query: 121 IIHTYARRAILGKGRKTVREGTTKGRMWECGLSKGRLTGSEIGKFLGLDTHEVGQVKCGS 180
                                                             HEVGQVKCGS
Sbjct: 121 -------------------------------------------------AHEVGQVKCGS 132

Query: 181 CAVLLMYPYGASSVRCSSCTSVTEIGVHNRRPPWSVQQGQAAPPTNFVQ 230
           CAVLLMYPYGASSVRCSSCTSVTEIGVHNRRPPWSV QGQAAPPTNFVQ
Sbjct: 181 CAVLLMYPYGASSVRCSSCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ 132

[Close]

BLAST of Spg036492 vs. NCBI nr
Match: XP_023001758.1 (protein LOL2 [Cucurbita maxima])

HSP 1 Score: 209.9 bits (533), Expect = 2.3e-50
Identity = 121/229 (52.84%), Postives = 124/229 (54.15%), Query Frame = 0


Query: 1   MEVHEIEKDEDDGPPPGWESITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGA 60
           ME+HEIEKDEDDGPPPGWE ITPPLP  PP PLS     +DMAQMVCG+CRRLLKYLKGA
Sbjct: 1   MEIHEIEKDEDDGPPPGWEPITPPLPQQPPQPLS-----SDMAQMVCGTCRRLLKYLKGA 60

Query: 61  RYVQCSCCSTVNYVLEGSRVVRQYFRVSVFCGSAWVVLSFDLYVIIEEIGYTGDVIVRPS 120
           RYVQCSCCSTVNYVLE                                            
Sbjct: 61  RYVQCSCCSTVNYVLE-------------------------------------------- 120

Query: 121 IIHTYARRAILGKGRKTVREGTTKGRMWECGLSKGRLTGSEIGKFLGLDTHEVGQVKCGS 180
                                                             HEVGQVKCGS
Sbjct: 121 -------------------------------------------------AHEVGQVKCGS 131

Query: 181 CAVLLMYPYGASSVRCSSCTSVTEIGVHNRRPPWSVQQGQAAPPTNFVQ 230
           CAVLLMYPYGASSVRCSSCT VTEIGVHNRRPPWSVQQGQAAPPTN VQ
Sbjct: 181 CAVLLMYPYGASSVRCSSCTCVTEIGVHNRRPPWSVQQGQAAPPTNSVQ 131

[Close]

BLAST of Spg036492 vs. NCBI nr
Match: XP_004146601.1 (protein LOL2 isoform X2 [Cucumis sativus] >KGN64676.1 hypothetical protein Csa_013266 [Cucumis sativus])

HSP 1 Score: 209.9 bits (533), Expect = 2.3e-50
Identity = 121/229 (52.84%), Postives = 125/229 (54.59%), Query Frame = 0


Query: 1   MEVHEIEKDEDDGPPPGWESITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGA 60
           M+VHEIEKDEDDGPPPGWE ITP LP PPPP LS     +DMAQMVCG+CRRLLKYLKGA
Sbjct: 1   MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLS-----SDMAQMVCGTCRRLLKYLKGA 60

Query: 61  RYVQCSCCSTVNYVLEGSRVVRQYFRVSVFCGSAWVVLSFDLYVIIEEIGYTGDVIVRPS 120
           RYVQCSCCSTVN+VLE                                            
Sbjct: 61  RYVQCSCCSTVNFVLE-------------------------------------------- 120

Query: 121 IIHTYARRAILGKGRKTVREGTTKGRMWECGLSKGRLTGSEIGKFLGLDTHEVGQVKCGS 180
                                                             HEVGQVKCGS
Sbjct: 121 -------------------------------------------------AHEVGQVKCGS 131

Query: 181 CAVLLMYPYGASSVRCSSCTSVTEIGVHNRRPPWSVQQGQAAPPTNFVQ 230
           CAVLLMYPYGASSVRCSSCTSVTEIGVHNRRPPWSV QGQAAPPTNFVQ
Sbjct: 181 CAVLLMYPYGASSVRCSSCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ 131

[Close]

BLAST of Spg036492 vs. NCBI nr
Match: XP_008442535.1 (PREDICTED: protein LOL2 isoform X3 [Cucumis melo] >TYK26415.1 protein LOL2 isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 208.4 bits (529), Expect = 6.7e-50
Identity = 122/229 (53.28%), Postives = 125/229 (54.59%), Query Frame = 0


Query: 1   MEVHEIEKDEDDGPPPGWESITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGA 60
           M+VHEIEKDEDDGPPPGWE ITP LP PP P LS    PADMAQMVCG+CRRLLKYLKGA
Sbjct: 1   MDVHEIEKDEDDGPPPGWEPITPSLPLPPQPQLS----PADMAQMVCGTCRRLLKYLKGA 60

Query: 61  RYVQCSCCSTVNYVLEGSRVVRQYFRVSVFCGSAWVVLSFDLYVIIEEIGYTGDVIVRPS 120
           RYVQCS CSTVN+VLE                                            
Sbjct: 61  RYVQCSWCSTVNFVLE-------------------------------------------- 120

Query: 121 IIHTYARRAILGKGRKTVREGTTKGRMWECGLSKGRLTGSEIGKFLGLDTHEVGQVKCGS 180
                                                             HEVGQVKCGS
Sbjct: 121 -------------------------------------------------AHEVGQVKCGS 132

Query: 181 CAVLLMYPYGASSVRCSSCTSVTEIGVHNRRPPWSVQQGQAAPPTNFVQ 230
           CAVLLMYPYGASSVRCSSCTSVTEIGVHNRRPPWSVQQGQAAPPTNFVQ
Sbjct: 181 CAVLLMYPYGASSVRCSSCTSVTEIGVHNRRPPWSVQQGQAAPPTNFVQ 132

[Close]

BLAST of Spg036492 vs. ExPASy Swiss-Prot
Match: O65426 (Protein LOL2 OS=Arabidopsis thaliana OX=3702 GN=LOL2 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.5e-23
Identity = 76/223 (34.08%), Postives = 95/223 (42.60%), Query Frame = 0


Query: 5   EIEKDEDDGPPPGWESITPPLPPP--------PPPPLSCECFPADMAQMVCGSCRRLLKY 64
           E E++E++GPPPGWES    LPPP         P P + E    + AQMVCGSCRRLL Y
Sbjct: 17  EEEEEEEEGPPPGWESAV--LPPPIVTITAAVNPNPTTVEI--PEKAQMVCGSCRRLLSY 76

Query: 65  LKGARYVQCSCCSTVNYVLEGSRVVRQYFRVSVFCGSAWVVLSFDLYVIIEEIGYTGDVI 124
           L+G+++V+CS C TVN VLE                                        
Sbjct: 77  LRGSKHVKCSSCQTVNLVLE---------------------------------------- 136

Query: 125 VRPSIIHTYARRAILGKGRKTVREGTTKGRMWECGLSKGRLTGSEIGKFLGLDTHEVGQV 184
                                                                 ++VGQV
Sbjct: 137 -----------------------------------------------------ANQVGQV 142

Query: 185 KCGSCAVLLMYPYGASSVRCSSCTSVTEIGVHNRRPPWSVQQG 220
            C +C +LLMYPYGA +VRCSSC SVT+I  +N+RPPWS QQG
Sbjct: 197 NCNNCKLLLMYPYGAPAVRCSSCNSVTDISENNKRPPWSEQQG 142

[Close]

BLAST of Spg036492 vs. ExPASy Swiss-Prot
Match: Q704V3 (Protein LOL5 OS=Oryza sativa subsp. japonica OX=39947 GN=LOL5 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.5e-15
Identity = 62/203 (30.54%), Postives = 75/203 (36.95%), Query Frame = 0


Query: 16  PGWESITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVL 75
           P  +   P +PPPP P L+ E     + QMVCGSCR LL Y +GA YV C+CC T+NYVL
Sbjct: 47  PCLQDSVPLVPPPPSPYLNKE-----VGQMVCGSCRILLAYFRGAGYVHCTCCQTMNYVL 106

Query: 76  EGSRVVRQYFRVSVFCGSAWVVLSFDLYVIIEEIGYTGDVIVRPSIIHTYARRAILGKGR 135
           E                                                           
Sbjct: 107 E----------------------------------------------------------- 151

Query: 136 KTVREGTTKGRMWECGLSKGRLTGSEIGKFLGLDTHEVGQVKCGSCAVLLMYPYGASSVR 195
                                              HEVG+V CG CA LLMYP+GA +V+
Sbjct: 167 ----------------------------------AHEVGKVHCGHCATLLMYPFGAPAVK 151

Query: 196 CSSCTSVTEIGVHNRRPPWSVQQ 219
           CS C  VTEIG  N R   S++Q
Sbjct: 227 CSLCLFVTEIGERNVRRRLSIEQ 151

[Close]

BLAST of Spg036492 vs. ExPASy Swiss-Prot
Match: P94077 (Protein LSD1 OS=Arabidopsis thaliana OX=3702 GN=LSD1 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 6.3e-11
Identity = 54/200 (27.00%), Postives = 69/200 (34.50%), Query Frame = 0


Query: 28  PPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEGSRVVRQYFRV 87
           PPPPP      P DMA ++CG CR +L Y +GA  V+CSCC T N V             
Sbjct: 40  PPPPP------PHDMAHIICGGCRTMLMYTRGASSVRCSCCQTTNLV------------- 99

Query: 88  SVFCGSAWVVLSFDLYVIIEEIGYTGDVIVRPSIIHTYARRAILGKGRKTVREGTTKGRM 147
                                  ++  V   PS                           
Sbjct: 100 ---------------------PAHSNQVAHAPS--------------------------- 149

Query: 148 WECGLSKGRLTGSEIGKFLGLDTHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIGV 207
                                   +V Q+ CG C   LMYPYGASSV+C+ C  VT + +
Sbjct: 160 -----------------------SQVAQINCGHCRTTLMYPYGASSVKCAVCQFVTNVNM 149

Query: 208 HNRRPPWSVQQ--GQAAPPT 226
            N R P    +  G A PP+
Sbjct: 220 SNGRVPLPTNRPNGTACPPS 149

[Close]

BLAST of Spg036492 vs. ExPASy Swiss-Prot
Match: Q0J7V9 (Protein LSD1 OS=Oryza sativa subsp. japonica OX=39947 GN=LSD1 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.0e-09
Identity = 52/183 (28.42%), Postives = 70/183 (38.25%), Query Frame = 0


Query: 24  PLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEGSRVVRQ 83
           PL P P PP+         +Q+VC  CR LL Y  GA  V C+ CSTV  V      + Q
Sbjct: 45  PLAPYPTPPVPFTPPNGAQSQLVCSGCRNLLMYPAGATSVCCAVCSTVTAVPAPGTEMAQ 104

Query: 84  YFRVSVFCGSAWVVLSFDLYVIIEEIGYTGDVIVRPSIIHTYARRAILGKGRKTVREGTT 143
                + CG    +L +            G   V+ S  HT                   
Sbjct: 105 -----LVCGGCHTLLMY----------IRGATSVQCSCCHTVN----------------- 164

Query: 144 KGRMWECGLSKGRLTGSEIGKFLGLDTHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVT 203
                                 L ++ ++V  V CG+C +LLMY YGA SV+C+ C  VT
Sbjct: 165 ----------------------LAMEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVT 173

Query: 204 EIG 207
            +G
Sbjct: 225 SVG 173

[Close]

BLAST of Spg036492 vs. ExPASy Swiss-Prot
Match: Q93ZB1 (Protein LOL1 OS=Arabidopsis thaliana OX=3702 GN=LOL1 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.0e-08
Identity = 54/190 (28.42%), Postives = 72/190 (37.89%), Query Frame = 0


Query: 24  PLPPPPPPPL--SCECFPAD-----MAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLE 83
           P P PP P L  S    PA+      +Q+VC  CR LL Y  GA  V C+ C+ V  V  
Sbjct: 7   PYPTPPAPALAPSYNTPPANGSTSGQSQLVCSGCRNLLMYPVGATSVCCAVCNAVTAVPP 66

Query: 84  GSRVVRQYFRVSVFCGSAWVVLSFDLYVIIEEIGYTGDVIVRPSIIHTYARRAILGKGRK 143
               + Q     + CG    +L +            G   V+ S  HT            
Sbjct: 67  PGTEMAQ-----LVCGGCHTLLMY----------IRGATSVQCSCCHTVN---------- 126

Query: 144 TVREGTTKGRMWECGLSKGRLTGSEIGKFLGLDTHEVGQVKCGSCAVLLMYPYGASSVRC 203
                                        L L+ ++V  V CG+C +LLMY YGA SV+C
Sbjct: 127 -----------------------------LALEANQVAHVNCGNCMMLLMYQYGARSVKC 142

Query: 204 SSCTSVTEIG 207
           + C  VT +G
Sbjct: 187 AVCNFVTSVG 142

[Close]

BLAST of Spg036492 vs. ExPASy TrEMBL
Match: A0A6J1EMN3 (protein LOL2 OS=Cucurbita moschata OX=3662 GN=LOC111433966 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 1.3e-51
Identity = 122/229 (53.28%), Postives = 125/229 (54.59%), Query Frame = 0


Query: 1   MEVHEIEKDEDDGPPPGWESITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGA 60
           ME+HEIEKDEDDGPPPGWE ITPPLP PPP PLS     +DMAQMVCG+CRRLLKYLKGA
Sbjct: 1   MEIHEIEKDEDDGPPPGWEPITPPLPQPPPQPLS-----SDMAQMVCGTCRRLLKYLKGA 60

Query: 61  RYVQCSCCSTVNYVLEGSRVVRQYFRVSVFCGSAWVVLSFDLYVIIEEIGYTGDVIVRPS 120
           RYVQCSCCSTVNYVLE                                            
Sbjct: 61  RYVQCSCCSTVNYVLE-------------------------------------------- 120

Query: 121 IIHTYARRAILGKGRKTVREGTTKGRMWECGLSKGRLTGSEIGKFLGLDTHEVGQVKCGS 180
                                                             HEVGQVKCGS
Sbjct: 121 -------------------------------------------------AHEVGQVKCGS 131

Query: 181 CAVLLMYPYGASSVRCSSCTSVTEIGVHNRRPPWSVQQGQAAPPTNFVQ 230
           CAVLLMYPYGASSVRCSSCT VTEIGVHNRRPPWSVQQGQAAPPTN VQ
Sbjct: 181 CAVLLMYPYGASSVRCSSCTCVTEIGVHNRRPPWSVQQGQAAPPTNSVQ 131

[Close]

BLAST of Spg036492 vs. ExPASy TrEMBL
Match: A0A6J1KRG9 (protein LOL2 OS=Cucurbita maxima OX=3661 GN=LOC111495801 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.1e-50
Identity = 121/229 (52.84%), Postives = 124/229 (54.15%), Query Frame = 0


Query: 1   MEVHEIEKDEDDGPPPGWESITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGA 60
           ME+HEIEKDEDDGPPPGWE ITPPLP  PP PLS     +DMAQMVCG+CRRLLKYLKGA
Sbjct: 1   MEIHEIEKDEDDGPPPGWEPITPPLPQQPPQPLS-----SDMAQMVCGTCRRLLKYLKGA 60

Query: 61  RYVQCSCCSTVNYVLEGSRVVRQYFRVSVFCGSAWVVLSFDLYVIIEEIGYTGDVIVRPS 120
           RYVQCSCCSTVNYVLE                                            
Sbjct: 61  RYVQCSCCSTVNYVLE-------------------------------------------- 120

Query: 121 IIHTYARRAILGKGRKTVREGTTKGRMWECGLSKGRLTGSEIGKFLGLDTHEVGQVKCGS 180
                                                             HEVGQVKCGS
Sbjct: 121 -------------------------------------------------AHEVGQVKCGS 131

Query: 181 CAVLLMYPYGASSVRCSSCTSVTEIGVHNRRPPWSVQQGQAAPPTNFVQ 230
           CAVLLMYPYGASSVRCSSCT VTEIGVHNRRPPWSVQQGQAAPPTN VQ
Sbjct: 181 CAVLLMYPYGASSVRCSSCTCVTEIGVHNRRPPWSVQQGQAAPPTNSVQ 131

[Close]

BLAST of Spg036492 vs. ExPASy TrEMBL
Match: A0A0A0LXE3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073830 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.1e-50
Identity = 121/229 (52.84%), Postives = 125/229 (54.59%), Query Frame = 0


Query: 1   MEVHEIEKDEDDGPPPGWESITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGA 60
           M+VHEIEKDEDDGPPPGWE ITP LP PPPP LS     +DMAQMVCG+CRRLLKYLKGA
Sbjct: 1   MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLS-----SDMAQMVCGTCRRLLKYLKGA 60

Query: 61  RYVQCSCCSTVNYVLEGSRVVRQYFRVSVFCGSAWVVLSFDLYVIIEEIGYTGDVIVRPS 120
           RYVQCSCCSTVN+VLE                                            
Sbjct: 61  RYVQCSCCSTVNFVLE-------------------------------------------- 120

Query: 121 IIHTYARRAILGKGRKTVREGTTKGRMWECGLSKGRLTGSEIGKFLGLDTHEVGQVKCGS 180
                                                             HEVGQVKCGS
Sbjct: 121 -------------------------------------------------AHEVGQVKCGS 131

Query: 181 CAVLLMYPYGASSVRCSSCTSVTEIGVHNRRPPWSVQQGQAAPPTNFVQ 230
           CAVLLMYPYGASSVRCSSCTSVTEIGVHNRRPPWSV QGQAAPPTNFVQ
Sbjct: 181 CAVLLMYPYGASSVRCSSCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ 131

[Close]

BLAST of Spg036492 vs. ExPASy TrEMBL
Match: A0A5D3DST5 (Protein LOL2 isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00790 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 3.2e-50
Identity = 122/229 (53.28%), Postives = 125/229 (54.59%), Query Frame = 0


Query: 1   MEVHEIEKDEDDGPPPGWESITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGA 60
           M+VHEIEKDEDDGPPPGWE ITP LP PP P LS    PADMAQMVCG+CRRLLKYLKGA
Sbjct: 1   MDVHEIEKDEDDGPPPGWEPITPSLPLPPQPQLS----PADMAQMVCGTCRRLLKYLKGA 60

Query: 61  RYVQCSCCSTVNYVLEGSRVVRQYFRVSVFCGSAWVVLSFDLYVIIEEIGYTGDVIVRPS 120
           RYVQCS CSTVN+VLE                                            
Sbjct: 61  RYVQCSWCSTVNFVLE-------------------------------------------- 120

Query: 121 IIHTYARRAILGKGRKTVREGTTKGRMWECGLSKGRLTGSEIGKFLGLDTHEVGQVKCGS 180
                                                             HEVGQVKCGS
Sbjct: 121 -------------------------------------------------AHEVGQVKCGS 132

Query: 181 CAVLLMYPYGASSVRCSSCTSVTEIGVHNRRPPWSVQQGQAAPPTNFVQ 230
           CAVLLMYPYGASSVRCSSCTSVTEIGVHNRRPPWSVQQGQAAPPTNFVQ
Sbjct: 181 CAVLLMYPYGASSVRCSSCTSVTEIGVHNRRPPWSVQQGQAAPPTNFVQ 132

[Close]

BLAST of Spg036492 vs. ExPASy TrEMBL
Match: A0A1S3B6K2 (protein LOL2 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103486365 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 3.2e-50
Identity = 122/229 (53.28%), Postives = 125/229 (54.59%), Query Frame = 0


Query: 1   MEVHEIEKDEDDGPPPGWESITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGA 60
           M+VHEIEKDEDDGPPPGWE ITP LP PP P LS    PADMAQMVCG+CRRLLKYLKGA
Sbjct: 1   MDVHEIEKDEDDGPPPGWEPITPSLPLPPQPQLS----PADMAQMVCGTCRRLLKYLKGA 60

Query: 61  RYVQCSCCSTVNYVLEGSRVVRQYFRVSVFCGSAWVVLSFDLYVIIEEIGYTGDVIVRPS 120
           RYVQCS CSTVN+VLE                                            
Sbjct: 61  RYVQCSWCSTVNFVLE-------------------------------------------- 120

Query: 121 IIHTYARRAILGKGRKTVREGTTKGRMWECGLSKGRLTGSEIGKFLGLDTHEVGQVKCGS 180
                                                             HEVGQVKCGS
Sbjct: 121 -------------------------------------------------AHEVGQVKCGS 132

Query: 181 CAVLLMYPYGASSVRCSSCTSVTEIGVHNRRPPWSVQQGQAAPPTNFVQ 230
           CAVLLMYPYGASSVRCSSCTSVTEIGVHNRRPPWSVQQGQAAPPTNFVQ
Sbjct: 181 CAVLLMYPYGASSVRCSSCTSVTEIGVHNRRPPWSVQQGQAAPPTNFVQ 132

[Close]

BLAST of Spg036492 vs. TAIR 10
Match: AT4G21610.1 (lsd one like 2 )

HSP 1 Score: 110.5 bits (275), Expect = 1.8e-24
Identity = 76/223 (34.08%), Postives = 95/223 (42.60%), Query Frame = 0


Query: 5   EIEKDEDDGPPPGWESITPPLPPP--------PPPPLSCECFPADMAQMVCGSCRRLLKY 64
           E E++E++GPPPGWES    LPPP         P P + E    + AQMVCGSCRRLL Y
Sbjct: 17  EEEEEEEEGPPPGWESAV--LPPPIVTITAAVNPNPTTVEI--PEKAQMVCGSCRRLLSY 76

Query: 65  LKGARYVQCSCCSTVNYVLEGSRVVRQYFRVSVFCGSAWVVLSFDLYVIIEEIGYTGDVI 124
           L+G+++V+CS C TVN VLE                                        
Sbjct: 77  LRGSKHVKCSSCQTVNLVLE---------------------------------------- 136

Query: 125 VRPSIIHTYARRAILGKGRKTVREGTTKGRMWECGLSKGRLTGSEIGKFLGLDTHEVGQV 184
                                                                 ++VGQV
Sbjct: 137 -----------------------------------------------------ANQVGQV 142

Query: 185 KCGSCAVLLMYPYGASSVRCSSCTSVTEIGVHNRRPPWSVQQG 220
            C +C +LLMYPYGA +VRCSSC SVT+I  +N+RPPWS QQG
Sbjct: 197 NCNNCKLLLMYPYGAPAVRCSSCNSVTDISENNKRPPWSEQQG 142

[Close]

BLAST of Spg036492 vs. TAIR 10
Match: AT4G20380.8 (LSD1 zinc finger family protein )

HSP 1 Score: 81.6 bits (200), Expect = 8.8e-16
Identity = 61/200 (30.50%), Postives = 81/200 (40.50%), Query Frame = 0


Query: 28  PPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEGSRVVRQYFRV 87
           PPPPP      P DMA ++CG CR +L Y +GA  V+CSCC T N V E S         
Sbjct: 35  PPPPP------PHDMAHIICGGCRTMLMYTRGASSVRCSCCQTTNLVPESS--------- 94

Query: 88  SVFCGSAWVVLSFDLYVIIEEIGYTGDVIVRPSIIHTYARRAILGKGRKTVREGTTKGRM 147
                     L FD                  +I+     + + G G             
Sbjct: 95  --------FTLLFD------------------NILKVLKTKLLDGPG------------- 154

Query: 148 WECGLSKGRLTGSEIGKFLGLDTHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIGV 207
              GL+          +     + +V Q+ CG C   LMYPYGASSV+C+ C  VT + +
Sbjct: 155 ---GLAHS-------NQVAHAPSSQVAQINCGHCRTTLMYPYGASSVKCAVCQFVTNVNM 170

Query: 208 HNRRPPWSVQQ--GQAAPPT 226
            N R P    +  G A PP+
Sbjct: 215 SNGRVPLPTNRPNGTACPPS 170

[Close]

BLAST of Spg036492 vs. TAIR 10
Match: AT4G20380.2 (LSD1 zinc finger family protein )

HSP 1 Score: 69.3 bits (168), Expect = 4.5e-12
Identity = 54/200 (27.00%), Postives = 69/200 (34.50%), Query Frame = 0


Query: 28  PPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEGSRVVRQYFRV 87
           PPPPP      P DMA ++CG CR +L Y +GA  V+CSCC T N V             
Sbjct: 40  PPPPP------PHDMAHIICGGCRTMLMYTRGASSVRCSCCQTTNLV------------- 99

Query: 88  SVFCGSAWVVLSFDLYVIIEEIGYTGDVIVRPSIIHTYARRAILGKGRKTVREGTTKGRM 147
                                  ++  V   PS                           
Sbjct: 100 ---------------------PAHSNQVAHAPS--------------------------- 149

Query: 148 WECGLSKGRLTGSEIGKFLGLDTHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIGV 207
                                   +V Q+ CG C   LMYPYGASSV+C+ C  VT + +
Sbjct: 160 -----------------------SQVAQINCGHCRTTLMYPYGASSVKCAVCQFVTNVNM 149

Query: 208 HNRRPPWSVQQ--GQAAPPT 226
            N R P    +  G A PP+
Sbjct: 220 SNGRVPLPTNRPNGTACPPS 149

[Close]

BLAST of Spg036492 vs. TAIR 10
Match: AT4G20380.1 (LSD1 zinc finger family protein )

HSP 1 Score: 69.3 bits (168), Expect = 4.5e-12
Identity = 54/200 (27.00%), Postives = 69/200 (34.50%), Query Frame = 0


Query: 28  PPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEGSRVVRQYFRV 87
           PPPPP      P DMA ++CG CR +L Y +GA  V+CSCC T N V             
Sbjct: 35  PPPPP------PHDMAHIICGGCRTMLMYTRGASSVRCSCCQTTNLV------------- 94

Query: 88  SVFCGSAWVVLSFDLYVIIEEIGYTGDVIVRPSIIHTYARRAILGKGRKTVREGTTKGRM 147
                                  ++  V   PS                           
Sbjct: 95  ---------------------PAHSNQVAHAPS--------------------------- 144

Query: 148 WECGLSKGRLTGSEIGKFLGLDTHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIGV 207
                                   +V Q+ CG C   LMYPYGASSV+C+ C  VT + +
Sbjct: 155 -----------------------SQVAQINCGHCRTTLMYPYGASSVKCAVCQFVTNVNM 144

Query: 208 HNRRPPWSVQQ--GQAAPPT 226
            N R P    +  G A PP+
Sbjct: 215 SNGRVPLPTNRPNGTACPPS 144

[Close]

BLAST of Spg036492 vs. TAIR 10
Match: AT4G20380.3 (LSD1 zinc finger family protein )

HSP 1 Score: 69.3 bits (168), Expect = 4.5e-12
Identity = 54/200 (27.00%), Postives = 69/200 (34.50%), Query Frame = 0


Query: 28  PPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEGSRVVRQYFRV 87
           PPPPP      P DMA ++CG CR +L Y +GA  V+CSCC T N V             
Sbjct: 35  PPPPP------PHDMAHIICGGCRTMLMYTRGASSVRCSCCQTTNLV------------- 94

Query: 88  SVFCGSAWVVLSFDLYVIIEEIGYTGDVIVRPSIIHTYARRAILGKGRKTVREGTTKGRM 147
                                  ++  V   PS                           
Sbjct: 95  ---------------------PAHSNQVAHAPS--------------------------- 144

Query: 148 WECGLSKGRLTGSEIGKFLGLDTHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIGV 207
                                   +V Q+ CG C   LMYPYGASSV+C+ C  VT + +
Sbjct: 155 -----------------------SQVAQINCGHCRTTLMYPYGASSVKCAVCQFVTNVNM 144

Query: 208 HNRRPPWSVQQ--GQAAPPT 226
            N R P    +  G A PP+
Sbjct: 215 SNGRVPLPTNRPNGTACPPS 144

The following BLAST results are available for this feature:

BLAST of Spg036492 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927005.1	2.7e-51	53.28	protein LOL2 [Cucurbita moschata] >XP_023519123.1 protein LOL2 [Cucurbita pepo s...	[more]
XP_011653178.1	1.3e-50	53.28	protein LOL2 isoform X1 [Cucumis sativus]	[more]
XP_023001758.1	2.3e-50	52.84	protein LOL2 [Cucurbita maxima]	[more]
XP_004146601.1	2.3e-50	52.84	protein LOL2 isoform X2 [Cucumis sativus] >KGN64676.1 hypothetical protein Csa_0...	[more]
XP_008442535.1	6.7e-50	53.28	PREDICTED: protein LOL2 isoform X3 [Cucumis melo] >TYK26415.1 protein LOL2 isofo...	[more]

BLAST of Spg036492 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65426	2.5e-23	34.08	Protein LOL2 OS=Arabidopsis thaliana OX=3702 GN=LOL2 PE=1 SV=1	[more]
Q704V3	5.5e-15	30.54	Protein LOL5 OS=Oryza sativa subsp. japonica OX=39947 GN=LOL5 PE=2 SV=1	[more]
P94077	6.3e-11	27.00	Protein LSD1 OS=Arabidopsis thaliana OX=3702 GN=LSD1 PE=1 SV=1	[more]
Q0J7V9	2.0e-09	28.42	Protein LSD1 OS=Oryza sativa subsp. japonica OX=39947 GN=LSD1 PE=2 SV=1	[more]
Q93ZB1	5.0e-08	28.42	Protein LOL1 OS=Arabidopsis thaliana OX=3702 GN=LOL1 PE=2 SV=1	[more]

BLAST of Spg036492 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EMN3	1.3e-51	53.28	protein LOL2 OS=Cucurbita moschata OX=3662 GN=LOC111433966 PE=4 SV=1	[more]
A0A6J1KRG9	1.1e-50	52.84	protein LOL2 OS=Cucurbita maxima OX=3661 GN=LOC111495801 PE=4 SV=1	[more]
A0A0A0LXE3	1.1e-50	52.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073830 PE=4 SV=1	[more]
A0A5D3DST5	3.2e-50	53.28	Protein LOL2 isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B6K2	3.2e-50	53.28	protein LOL2 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103486365 PE=4 SV=1	[more]

BLAST of Spg036492 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21610.1	1.8e-24	34.08	lsd one like 2	[more]
AT4G20380.8	8.8e-16	30.50	LSD1 zinc finger family protein	[more]
AT4G20380.2	4.5e-12	27.00	LSD1 zinc finger family protein	[more]
AT4G20380.1	4.5e-12	27.00	LSD1 zinc finger family protein	[more]
AT4G20380.3	4.5e-12	27.00	LSD1 zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005735	Zinc finger, LSD1-type	TIGRFAM	TIGR01053	TIGR01053	coord: 44..74 e-value: 9.8E-14 score: 48.7 coord: 175..204 e-value: 8.0E-12 score: 42.6
IPR005735	Zinc finger, LSD1-type	PFAM	PF06943	zf-LSD1	coord: 47..71 e-value: 2.1E-7 score: 30.6 coord: 178..202 e-value: 9.6E-11 score: 41.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	PANTHER	PTHR31747:SF17	PROTEIN LOL2	coord: 168..224 coord: 24..80
IPR040319	LSD1-like	PANTHER	PTHR31747	PROTEIN LSD1	coord: 168..224 coord: 24..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg036492.1	Spg036492.1	mRNA