Spg036474 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg036474
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	major pollen allergen Ole e 6-like
Location	scaffold5: 44950744 .. 44951655 (+)
RNA-Seq Expression	Spg036474
Synteny	Spg036474

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGAAAGAACGCTGTAAAATCTAAAAAGATTTTAAAGCGTTAGCAAAAGCAAAGAAAAAGAAAATGGCCAAGAAGATGATTGCTGTGTTCTTGATCTGCATTGTCATGGTGGCTGCATTGCACAACGCCAATGCCGACATATTGACCACCCACGAGATTAAATTGAACACTGACGAGGCTAAATACGAGTCTAAATTCGACTCCAAGTACAAGTCTTGCTATGAAACTTGCTTGAACGAATGCAAACATGGCAGCGGTGAAAGCTACTGTGAAGTTAAGTGTGACGAAGATTGTGGCGAAAAGGAAGTTGCTGGTACTCTCTCTTCTCATTCTTCTTCTAACTTTTTCACATTCATGTCTATCGTTGAGTAGAGATCTCACAATTTATAAGATAGATGGGTTATTCACTCATTGCCGACCCATGTTATCTGGTATCAGAGTCCAAAAAACATGCTGAGGATCAGCATAGAATCCTGATATGGTATTAGGGCCCATGAAACTCAAATGGGTATTCGATTTGGATTCAATCCAAGAATGGTGAATCCGAAGAGGCGCCATCTTGAAAATTAGTTTTGTGATGGAACTAAGAGATCTCGACATTTTCAAAACACTTTTGAGAAACGATTTTTTTTTATTATCATTATTGTGTCGTATTAATTTAAATTATTGTGTTTGTTTTACAGATAAGCTAAAGATCGACTTGGCGCATTGAATATTGGAGAACAAAAGAAAAAAGAGCTCTTGAGAATGGATCAAATAGTAATTGTATTAAAATCATGTTTGTGGGATCATTTCTCCTTTTTAATTTTGATGATGTGATCATTTGAATATTTTAATTTATAAAGTTTTCTTGGACCATTTTCATGGTGTTATTTTTATTCTAATTAAAGAAAAAATTATTATAATTTCCC

mRNA sequence

ATGGCCAAGAAGATGATTGCTGTGTTCTTGATCTGCATTGTCATGGTGGCTGCATTGCACAACGCCAATGCCGACATATTGACCACCCACGAGATTAAATTGAACACTGACGAGGCTAAATACGAGTCTAAATTCGACTCCAAGTACAAGTCTTGCTATGAAACTTGCTTGAACGAATGCAAACATGGCAGCGGTGAAAGCTACTGTGAAGTTAAGTGTGACGAAGATTGTGGCGAAAAGGAAGTTGCTGATAAGCTAAAGATCGACTTGGCGCATTGA

Coding sequence (CDS)

ATGGCCAAGAAGATGATTGCTGTGTTCTTGATCTGCATTGTCATGGTGGCTGCATTGCACAACGCCAATGCCGACATATTGACCACCCACGAGATTAAATTGAACACTGACGAGGCTAAATACGAGTCTAAATTCGACTCCAAGTACAAGTCTTGCTATGAAACTTGCTTGAACGAATGCAAACATGGCAGCGGTGAAAGCTACTGTGAAGTTAAGTGTGACGAAGATTGTGGCGAAAAGGAAGTTGCTGATAAGCTAAAGATCGACTTGGCGCATTGA

Protein sequence

MAKKMIAVFLICIVMVAALHNANADILTTHEIKLNTDEAKYESKFDSKYKSCYETCLNECKHGSGESYCEVKCDEDCGEKEVADKLKIDLAH

Homology

[Close]

BLAST of Spg036474 vs. NCBI nr
Match: XP_004146471.1 (major pollen allergen Ole e 6 [Cucumis sativus] >KGN50739.1 hypothetical protein Csa_005859 [Cucumis sativus])

HSP 1 Score: 109.8 bits (273), Expect = 1.3e-20
Identity = 59/91 (64.84%), Postives = 70/91 (76.92%), Query Frame = 0


Query: 1  MAKKMIAVFLICIVMVAALHNANADILTTHEIKLNTDEAKYESKFDSKYKSCYETCLNEC 60
          MA KMIA+FL+CIV+VAAL  ANA+           D AKYE+KFD+KYKSC+ETC  EC
Sbjct: 1  MANKMIALFLMCIVVVAALQFANAN---------KEDVAKYEAKFDAKYKSCFETCEKEC 60

Query: 61 -KHGSGESYCEVKCDEDCGEKEVADKLKIDL 91
           ++GSG+SYCEVKCDEDC EKE ADKL I+L
Sbjct: 61 LRYGSGQSYCEVKCDEDCDEKEAADKLHIEL 82

[Close]

BLAST of Spg036474 vs. NCBI nr
Match: XP_008456958.1 (PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo] >KAA0066995.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa] >TYJ96804.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 107.5 bits (267), Expect = 6.4e-20
Identity = 58/91 (63.74%), Postives = 72/91 (79.12%), Query Frame = 0


Query: 1  MAKKMIAVFLICIVMVAALHNANADILTTHEIKLNTDEAKYESKFDSKYKSCYETCLNEC 60
          MAKKMIA+FL+CIV+VAAL  A+A+           + AKYE+KFD+KYKSC++TC  EC
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASAN--------KEDEVAKYEAKFDAKYKSCFKTCEKEC 60

Query: 61 -KHGSGESYCEVKCDEDCGEKEVADKLKIDL 91
           ++GSG+SYCEVKCDEDC EKEVADKL I+L
Sbjct: 61 LENGSGQSYCEVKCDEDCNEKEVADKLHIEL 83

[Close]

BLAST of Spg036474 vs. NCBI nr
Match: XP_038891517.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 105.9 bits (263), Expect = 1.9e-19
Identity = 61/92 (66.30%), Postives = 69/92 (75.00%), Query Frame = 0


Query: 1  MAKKMIAVFLICIVMVAALHNANADILTTHEIKLNTDE-AKYESKFDSKYKSCYETCLNE 60
          MAKKM+AVFL+CIV+VAAL  A A          N DE  KYE+KFD+KYKSCYETC  E
Sbjct: 1  MAKKMMAVFLMCIVVVAALQFATA----------NEDEVTKYEAKFDAKYKSCYETCEKE 60

Query: 61 C-KHGSGESYCEVKCDEDCGEKEVADKLKIDL 91
          C  +GSG+S+CEVKCDEDC EKEVADKL I L
Sbjct: 61 CLANGSGQSFCEVKCDEDCDEKEVADKLHIKL 82

[Close]

BLAST of Spg036474 vs. NCBI nr
Match: XP_038906682.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 105.9 bits (263), Expect = 1.9e-19
Identity = 58/93 (62.37%), Postives = 68/93 (73.12%), Query Frame = 0


Query: 1  MAKKMIAVFLICIVMVAALHNANADILTTHEIKLNTDEAKYESKFDSKYKSCYETCLNEC 60
          MAKKMIAVFL+CIV++AAL    A          N + AKYE+KFD+KYKSCYETC  EC
Sbjct: 1  MAKKMIAVFLMCIVVMAALQFTTA----------NEEVAKYEAKFDAKYKSCYETCEKEC 60

Query: 61 -KHGSGESYCEVKCDEDCGEKEVADKLKIDLAH 93
           + G+G+S+CEVKCDEDC EKE ADKL I  AH
Sbjct: 61 LEKGNGQSFCEVKCDEDCDEKETADKLHIKPAH 83

[Close]

BLAST of Spg036474 vs. NCBI nr
Match: XP_038875643.1 (major pollen allergen Ole e 6-like [Benincasa hispida] >XP_038906512.1 major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 102.4 bits (254), Expect = 2.1e-18
Identity = 56/91 (61.54%), Postives = 68/91 (74.73%), Query Frame = 0


Query: 1  MAKKMIAVFLICIVMVAALHNANADILTTHEIKLNTDEAKYESKFDSKYKSCYETCLNEC 60
          MAKKMIAVF +CIV++AAL  A A          N +  KYE+KFD+KYKSCYETC  EC
Sbjct: 1  MAKKMIAVFFMCIVVMAALQFATA----------NEEVDKYEAKFDAKYKSCYETCEKEC 60

Query: 61 -KHGSGESYCEVKCDEDCGEKEVADKLKIDL 91
           ++GSG+++CEVKCDEDC EKE ADKL I+L
Sbjct: 61 LENGSGQTFCEVKCDEDCDEKEKADKLHIEL 81

[Close]

BLAST of Spg036474 vs. ExPASy Swiss-Prot
Match: O24172 (Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.1e-05
Identity = 20/43 (46.51%), Postives = 32/43 (74.42%), Query Frame = 0


Query: 46 DSKYKSCYETCLNECK-HGSGESYCEVKCDEDCGEKEVADKLK 88
          ++++K CY+TC  EC   G+G ++CE+KCD DC  K+V +KL+
Sbjct: 2  EAQFKECYDTCHKECSDKGNGFTFCEMKCDTDCSVKDVKEKLE 44

[Close]

BLAST of Spg036474 vs. ExPASy TrEMBL
Match: A0A0A0KPA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 6.3e-21
Identity = 59/91 (64.84%), Postives = 70/91 (76.92%), Query Frame = 0


Query: 1  MAKKMIAVFLICIVMVAALHNANADILTTHEIKLNTDEAKYESKFDSKYKSCYETCLNEC 60
          MA KMIA+FL+CIV+VAAL  ANA+           D AKYE+KFD+KYKSC+ETC  EC
Sbjct: 1  MANKMIALFLMCIVVVAALQFANAN---------KEDVAKYEAKFDAKYKSCFETCEKEC 60

Query: 61 -KHGSGESYCEVKCDEDCGEKEVADKLKIDL 91
           ++GSG+SYCEVKCDEDC EKE ADKL I+L
Sbjct: 61 LRYGSGQSYCEVKCDEDCDEKEAADKLHIEL 82

[Close]

BLAST of Spg036474 vs. ExPASy TrEMBL
Match: A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.1e-20
Identity = 58/91 (63.74%), Postives = 72/91 (79.12%), Query Frame = 0


Query: 1  MAKKMIAVFLICIVMVAALHNANADILTTHEIKLNTDEAKYESKFDSKYKSCYETCLNEC 60
          MAKKMIA+FL+CIV+VAAL  A+A+           + AKYE+KFD+KYKSC++TC  EC
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASAN--------KEDEVAKYEAKFDAKYKSCFKTCEKEC 60

Query: 61 -KHGSGESYCEVKCDEDCGEKEVADKLKIDL 91
           ++GSG+SYCEVKCDEDC EKEVADKL I+L
Sbjct: 61 LENGSGQSYCEVKCDEDCNEKEVADKLHIEL 83

[Close]

BLAST of Spg036474 vs. ExPASy TrEMBL
Match: A0A1S3C530 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.1e-20
Identity = 58/91 (63.74%), Postives = 72/91 (79.12%), Query Frame = 0


Query: 1  MAKKMIAVFLICIVMVAALHNANADILTTHEIKLNTDEAKYESKFDSKYKSCYETCLNEC 60
          MAKKMIA+FL+CIV+VAAL  A+A+           + AKYE+KFD+KYKSC++TC  EC
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASAN--------KEDEVAKYEAKFDAKYKSCFKTCEKEC 60

Query: 61 -KHGSGESYCEVKCDEDCGEKEVADKLKIDL 91
           ++GSG+SYCEVKCDEDC EKEVADKL I+L
Sbjct: 61 LENGSGQSYCEVKCDEDCNEKEVADKLHIEL 83

[Close]

BLAST of Spg036474 vs. ExPASy TrEMBL
Match: A0A6J1JXL5 (major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488756 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.4e-17
Identity = 54/89 (60.67%), Postives = 68/89 (76.40%), Query Frame = 0


Query: 1  MAKKMIAVFLICIVMVAALHNANADILTTHEIKLNTDEAKYESKFDSKYKSCYETCLNEC 60
          MAKKMIAV L+CIV++AAL  ++A    T  +K    EAKYE+KF++KY+ CYE C  EC
Sbjct: 1  MAKKMIAVLLVCIVVMAALQVSSA----TESVK----EAKYEAKFEAKYRLCYEKCEKEC 60

Query: 61 -KHGSGESYCEVKCDEDCGEKEVADKLKI 89
           + G+G+S+CEVKCDEDCGEKE ADKL I
Sbjct: 61 LEKGNGQSFCEVKCDEDCGEKEAADKLHI 81

[Close]

BLAST of Spg036474 vs. ExPASy TrEMBL
Match: A0A0A0K9Z9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 9.4e-17
Identity = 54/92 (58.70%), Postives = 63/92 (68.48%), Query Frame = 0


Query: 1  MAKKMIAVFLICIVMVAALHNANADILTTHEIKLNTDEAKYESKFDSKYKSCYETCLNEC 60
          MAKKM+AVFL+CIV+VA L    A+              KYE+KFD+KYKSCYETC  EC
Sbjct: 1  MAKKMMAVFLMCIVVVATLQFVMAN--------EEDGVTKYEAKFDAKYKSCYETCEKEC 60

Query: 61 KHG--SGESYCEVKCDEDCGEKEVADKLKIDL 91
               +GES+CEVKCDEDC EKE ADKL I+L
Sbjct: 61 LRNDTNGESFCEVKCDEDCSEKEAADKLHIEL 84

The following BLAST results are available for this feature:

BLAST of Spg036474 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146471.1	1.3e-20	64.84	major pollen allergen Ole e 6 [Cucumis sativus] >KGN50739.1 hypothetical protein...	[more]
XP_008456958.1	6.4e-20	63.74	PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo] >KAA0066995.1 major...	[more]
XP_038891517.1	1.9e-19	66.30	major pollen allergen Ole e 6-like [Benincasa hispida]	[more]
XP_038906682.1	1.9e-19	62.37	major pollen allergen Ole e 6-like [Benincasa hispida]	[more]
XP_038875643.1	2.1e-18	61.54	major pollen allergen Ole e 6-like [Benincasa hispida] >XP_038906512.1 major pol...	[more]

BLAST of Spg036474 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24172	2.1e-05	46.51	Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1	[more]

BLAST of Spg036474 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPA7	6.3e-21	64.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1	[more]
A0A5D3BCS2	3.1e-20	63.74	Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C530	3.1e-20	63.74	major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 ...	[more]
A0A6J1JXL5	1.4e-17	60.67	major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488756 P...	[more]
A0A0A0K9Z9	9.4e-17	58.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1	[more]

BLAST of Spg036474 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015333	Pollen allergen ole e 6	PFAM	PF09253	Ole_e_6	coord: 52..86 e-value: 8.2E-10 score: 38.5
IPR015333	Pollen allergen ole e 6	PANTHER	PTHR35632	MAJOR POLLEN ALLERGEN OLE E 6-LIKE	coord: 1..90
IPR036466	Pollen allergen ole e 6 superfamily	GENE3D	1.10.287.720	Pollen allergen ole e 6	coord: 46..89 e-value: 2.3E-14 score: 54.6
IPR036466	Pollen allergen ole e 6 superfamily	SUPERFAMILY	111388	Pollen allergen ole e 6	coord: 46..87
None	No IPR available	PANTHER	PTHR35632:SF5	SUBFAMILY NOT NAMED	coord: 1..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg036474.1	Spg036474.1	mRNA