Spg036300 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg036300
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	pre-mRNA-splicing factor SPF27 homolog
Location	scaffold5: 46713901 .. 46717767 (+)
RNA-Seq Expression	Spg036300
Synteny	Spg036300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTGCGCAAGCTCCTTCTTCTCGCACTCGAGCTTCTGTAAATCTAAAAACCTCCGTCGCTCGTTGTGGTGACTATGGCGACCAGCAACAATAACGGGGATATTCTAATGCTCGAAGCTCCGCCCCAGCCAGCTCAACCAGCGTGGCGTGTTCCTGCAGATGCCGAGGTAATCGACGCCCTGCCCTACATCGACGACGACTATGCAGACCCAAGGGTCAAAGCAGAGGTCGACCGCTTAGTGGAGGAAGAGATGCGGCGTAGCTCCAAGAGACCCGCCGACTTTCTCAAAGACTTGCCTCCTGTTCCCAAGTTCAAATTTGATGTAAGTTAGGTTGTAATTTCCTTTCCCGCTGGAGTTGTCCTCTAGGTCATGCACTTGTAGCTCCACTTCATTTCCTAGGTTTTCACGGCCGAAAGAACGAATTGCTTTTTTTCATTGGTTATATTTGCTAGACAGTTACTAGTGCCGAATTTGGAAGTGTTCATCTGCTGGTTCTGTTCCGTAACATCCTCTATTCGTTTACTCGAAAACGAGCTACACAAATTCGAATCAAAATTAATGGATCGACAAGAATACCAAATATTGCCTATCCGCAAGTGATAGTGTGTGAACCAAACGACTGTAGGATGCGCTAGTCACTCTTTCATAGGTTCTTTTACCATTACATAGGATAGATCTTGAAAATGTTACAGAATGAGATAATATTAGCGATAGTGTATTCAACTGACGAAGTTTGGACTCAGGATCATCCAATGCTTGCTAGAGAGTACGAACGTGTAAGAGCTGGGAGGCCTCCGGTGCCTCTCGATGTTGCAAGATATAAATTAGAGACACCACCTCCAAATAAAAAGAACGATGAAACTGCTTGGAAGCAGACACTTCAGAAAGCTCAATGCTTACTACGTCATCAAGTGCTGAGGTGAAGTTTTAATATGTTTTTATTGTTCGAGGCATTTAAGATTTTCATTTTGAAAAACTTTAAGTTTATGGAGAACAGTTAGAGTTGGCTACTTGAATTCATACAAGTCTTCTTATATCTGCAATACAGAGTTAATATTTTCACGGAGGTTCTCAAGTTATTAATTTATACTTGGCTCAAATTTCCGCTGACATAGACCACTTTAAATAGTTCACTTTAAGTGACCCTAAAAATTACTTGCTGTGTATAATTCTTCCCCATTCATCATATTTCTATCCATTTTCTTGGTTGCAGTTGGTTTCTTATAACCAGTTTGTGTACCTATGGGCCATGCTTATGAGAGATGTGTGATTTATACAATTTTGGTCAGGAGAAAACAAAATGTAGAAGATTACATGCCTAAGAGAGGTTTTGATGATTCTTTAGGAAATGATAAGATATGATAATTTAACTGCCGGTGGTGCCTTTGTGTTGTACTGCAGGCTGGAAAATTTGGAACTGATGTCAAAATATGGCCCTGATGTCTGGAAGCAGCACAACAAACAGTTGGAAGCACTTTTATCAAGGTGTTCTTTTTTATATTTTGTTTTGACGTTCTATATTTTATGTTATCCAATTATGGTTGTGTGAATCAAATATGGTTCCCATGTTTAATCCTTTGGCTTATCTCAAATTGTCCTGTTAATTTCAAGAAAAAAGAATTTCATATGGAGAAGCAATTATTATTCTTTGGTTGTGTACATTTCTCTTTCTCTCGTATAATGTTTGTAATTTTGGATTTTTAAACAGCAACTACACTCCTGTCCGAATTGACTTGACCTGTTATGCAAGTTATGAGGTGCAGACTTTTATATTTTTTAGATGCTTATCTTTGCACATTGATGACTTCAGGCTGAGTGTGACAATCTCTTCTATCCATTACAGTCCTTTTGATTACATTAGTCAGCAGAAATGAAACATGCGTATACGGTTACTGCTGCCTGTGGCTCTTTCTTTAATGAATGCCTAGGTGCTCTTTTTTGGTTTGCATCCATGCTTGAAGACTAGGGTTCATATTTGAGGAGGGTTAGCACTCCACATTATTTAAAGATGTAAAGAACTTCAACTAATTCAGTTAAGCTGTGGTTAAAACTTAAAAGAAAAAAAAAATGGTGCGGATGAAATGGTGAAAGTCTGGTGAAACACAGTTTTATGATTTGGTGCATTGTCGAAAATCTCATAGTTGATTTTTAATTTTCTTTGTAATCATGCCAACCAACCTCTGTCCTCATTGATAACCTAGGGTGGTTGCAAAGATCTACTTGCATGCTAAGAATCCATCTTGTTAAATGTATAAAGAAAATACACCAAAACTTAATTGTGGGTTCTTCATGAAATAATGACAATGAGATTCTGCATGTCTCTGCAGGATAAAAGTCAGTTTTTCTCTTTTGTATATAAATTCCAACATTCACTTGCTTGTTGTCGTATTATCTGAGGCAAGGGCCGTTGCTATCAAAACCGAAAACTATTGCATCTTAGGCATTTACTTTATGGAACAATTGACTATATTTTTATATGTATCATTTCTGAATGAAGTGATCATGAAAATACATTTGACCAACGTAGCCATATAATGATTCTTACTTATATTGTGATGTTGTTATCAGAATGCAAAAATTAGCTCAAGAGCAGAATGAGAAGATTGAAAAAGTGAACCGTGAAAGGAAATTTCATCAAGTAAGTAGCATCCCTGAAACTCATATTACTATAGGCTAGAGATCAATTTTTTGGAATAATTGGTTAATTATGTATTCAATGATCAGCAAAACGCTGCATATGAGCTCCATGCTTTGTCCACGCAATGGAAGGAACTTTGCCAGAAAAATATGGAAATCCAAGTGGCATGCTCTCAAGTAGAGGGTCAAATCCAGGAACTTAGGAGAGAGGCAGAAGAAAAGTAATCTTGCCTTTTCTATTTGGTCTATTTTAGTCATACACGTGTTTGGCATATTTTTAACTGATCTGTGGGTTATGATTTCAGAGGCTGGAATTTGGAAGTCAATGTAGAGAATGGTTCTGTTTCGCTTCCAGTGTCATAAGGTATGCTTTAGATGTCAATTTTTTTTTTAAAAAAGCTGACGTTTAACCCAAATTTTCTTCCATTTCACCTCGTTGTACATTAAATTTCCTAATTTCACACTACTTGTACCATGTTTTCTTTCTATTGTTTTTTTTTTTGTTTTTTTTTTCCCTTTCAATATCTTATGTTCTTAATGTGTCATCTCTGGACACCTACTTTAGTTATCTGTCTACCAAAACCATGTGTTACTGTTTTCTGATCTCATATGTGTGCTCCCATGTTCGAGTCAATTTTGATTTTTAGTAATCAATCTCATACGTGAATTGAGATGAATTCTTTGACCATTAATGTGCTCATGAGTTCCCTCTCCCTTCTTTGCCCTGCCTTTTCCTACCTTTCACCAACATATGAGAAAATACAGTAATTCAATCTGAATTTCTCAAATAGGTAAGGAGAAAGCTCAGTTTAGTAATGACAGAAAACTCAACCTTTACAATATGTGTCCGATTAATTTTACTGGTAGATTATGACATGATTTTTTGACATTTCATTGGTAGAGGGGAGCATCCTAACCATGGTTTTTGCTGCTCAAAACTAAAGACTGCCAACGTCTTTTGTTGCCGTGTTATCATATGCCTACATGGAAGATGAGTTAGTTTTCTGCTTATATGGGAGAAGGTTGGTTGCTCTTTTTTGGCCTCCAAAGTTTATCTTCTGTCATTTTCAAATTTTACATTGAATTAATTGTATCTGTACCTTTAGTCAAGTAATTCGAAATACAGCTACTTCTGCTAACCATGTTATTGGGTCAATCTGATTTATATATTATATATTATGTATAAATTATTGAACTACCAAAGTGACAATCAAATGGATAAATATTTT

mRNA sequence

ATGGCGACCAGCAACAATAACGGGGATATTCTAATGCTCGAAGCTCCGCCCCAGCCAGCTCAACCAGCGTGGCGTGTTCCTGCAGATGCCGAGGTAATCGACGCCCTGCCCTACATCGACGACGACTATGCAGACCCAAGGGTCAAAGCAGAGGTCGACCGCTTAGTGGAGGAAGAGATGCGGCGTAGCTCCAAGAGACCCGCCGACTTTCTCAAAGACTTGCCTCCTGTTCCCAAGTTCAAATTTGATGATCATCCAATGCTTGCTAGAGAGTACGAACGTGTAAGAGCTGGGAGGCCTCCGGTGCCTCTCGATGTTGCAAGATATAAATTAGAGACACCACCTCCAAATAAAAAGAACGATGAAACTGCTTGGAAGCAGACACTTCAGAAAGCTCAATGCTTACTACGTCATCAAGTGCTGAGGCTGGAAAATTTGGAACTGATGTCAAAATATGGCCCTGATGTCTGGAAGCAGCACAACAAACAGTTGGAAGCACTTTTATCAAGAATGCAAAAATTAGCTCAAGAGCAGAATGAGAAGATTGAAAAAGTGAACCGTGAAAGGAAATTTCATCAACAAAACGCTGCATATGAGCTCCATGCTTTGTCCACGCAATGGAAGGAACTTTGCCAGAAAAATATGGAAATCCAAGTGGCATGCTCTCAAGTAGAGGGTCAAATCCAGGAACTTAGGAGAGAGGCAGAAGAAAAAGGCTGGAATTTGGAAGTCAATGTAGAGAATGGTTCTGTTTCGCTTCCAGTGTCATAA

Coding sequence (CDS)

ATGGCGACCAGCAACAATAACGGGGATATTCTAATGCTCGAAGCTCCGCCCCAGCCAGCTCAACCAGCGTGGCGTGTTCCTGCAGATGCCGAGGTAATCGACGCCCTGCCCTACATCGACGACGACTATGCAGACCCAAGGGTCAAAGCAGAGGTCGACCGCTTAGTGGAGGAAGAGATGCGGCGTAGCTCCAAGAGACCCGCCGACTTTCTCAAAGACTTGCCTCCTGTTCCCAAGTTCAAATTTGATGATCATCCAATGCTTGCTAGAGAGTACGAACGTGTAAGAGCTGGGAGGCCTCCGGTGCCTCTCGATGTTGCAAGATATAAATTAGAGACACCACCTCCAAATAAAAAGAACGATGAAACTGCTTGGAAGCAGACACTTCAGAAAGCTCAATGCTTACTACGTCATCAAGTGCTGAGGCTGGAAAATTTGGAACTGATGTCAAAATATGGCCCTGATGTCTGGAAGCAGCACAACAAACAGTTGGAAGCACTTTTATCAAGAATGCAAAAATTAGCTCAAGAGCAGAATGAGAAGATTGAAAAAGTGAACCGTGAAAGGAAATTTCATCAACAAAACGCTGCATATGAGCTCCATGCTTTGTCCACGCAATGGAAGGAACTTTGCCAGAAAAATATGGAAATCCAAGTGGCATGCTCTCAAGTAGAGGGTCAAATCCAGGAACTTAGGAGAGAGGCAGAAGAAAAAGGCTGGAATTTGGAAGTCAATGTAGAGAATGGTTCTGTTTCGCTTCCAGTGTCATAA

Protein sequence

MATSNNNGDILMLEAPPQPAQPAWRVPADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELCQKNMEIQVACSQVEGQIQELRREAEEKGWNLEVNVENGSVSLPVS

Homology

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BLAST of Spg036300 vs. NCBI nr
Match: XP_004137495.1 (pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus] >KGN64160.1 hypothetical protein Csa_014348 [Cucumis sativus])

HSP 1 Score: 491.1 bits (1263), Expect = 5.7e-135
Identity = 244/256 (95.31%), Postives = 252/256 (98.44%), Query Frame = 0


Query: 1   MATSNNNGDILMLEAPPQPAQPAWRVPADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA +NNNGDILMLEAPPQP+QPAWRV ADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPP+PKFKF+DHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQKAQCLLRHQVLRLENL+LMSKYGPD+WKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCQKNMEIQVACSQVEGQIQELRREAEEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELC+KNMEIQVAC Q+EGQIQELRREA EKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 257
           NLEVNVENGSVSLPVS
Sbjct: 241 NLEVNVENGSVSLPVS 256

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BLAST of Spg036300 vs. NCBI nr
Match: XP_038893573.1 (pre-mRNA-splicing factor SPF27 homolog [Benincasa hispida])

HSP 1 Score: 489.2 bits (1258), Expect = 2.2e-134
Identity = 243/256 (94.92%), Postives = 252/256 (98.44%), Query Frame = 0


Query: 1   MATSNNNGDILMLEAPPQPAQPAWRVPADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MAT+N NGDILMLEAPPQP+QPAWRV ADAEV+DALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MATNNINGDILMLEAPPQPSQPAWRVAADAEVVDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPVPKFKF+DHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPVPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQKAQCLLRHQVLRLENL+LMSKYGPD+WKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCQKNMEIQVACSQVEGQIQELRREAEEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELC+KNMEIQVAC Q+EGQI+ELRREA EKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIEELRREATEKGW 240

Query: 241 NLEVNVENGSVSLPVS 257
           NLEVNVENGSVSLPVS
Sbjct: 241 NLEVNVENGSVSLPVS 256

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BLAST of Spg036300 vs. NCBI nr
Match: XP_008462680.1 (PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Cucumis melo])

HSP 1 Score: 488.8 bits (1257), Expect = 2.9e-134
Identity = 243/256 (94.92%), Postives = 251/256 (98.05%), Query Frame = 0


Query: 1   MATSNNNGDILMLEAPPQPAQPAWRVPADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA +NNNGDILMLEAPPQP+QPAWRV ADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPP+PK KF+DHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQKAQCLLRHQVLRLENL+LMSKYGPD+WKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCQKNMEIQVACSQVEGQIQELRREAEEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELC+KNMEIQVAC Q+EGQIQELRREA EKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 257
           NLEVNVENGSVSLPVS
Sbjct: 241 NLEVNVENGSVSLPVS 256

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BLAST of Spg036300 vs. NCBI nr
Match: KAG6584331.1 (Pre-mRNA-splicing factor SPF27-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019921.1 Pre-mRNA-splicing factor SPF27-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 485.3 bits (1248), Expect = 3.2e-133
Identity = 240/256 (93.75%), Postives = 251/256 (98.05%), Query Frame = 0


Query: 1   MATSNNNGDILMLEAPPQPAQPAWRVPADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA +NN+GDILMLEAPPQP+QPAWRV ADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPP+PKFKF+DHPMLAREYERVRAGRPP+PLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQ+AQCLL+HQVLRLENLELMSKYGPD+WKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCQKNMEIQVACSQVEGQIQELRREAEEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELC+KNMEIQVACSQ+EGQIQELR EA EKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 257
           NLEVNVENGSVS PVS
Sbjct: 241 NLEVNVENGSVSFPVS 256

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BLAST of Spg036300 vs. NCBI nr
Match: XP_023518986.1 (pre-mRNA-splicing factor SPF27 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 484.2 bits (1245), Expect = 7.0e-133
Identity = 239/256 (93.36%), Postives = 251/256 (98.05%), Query Frame = 0


Query: 1   MATSNNNGDILMLEAPPQPAQPAWRVPADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA +NN+GDILMLEAPPQP+QPAWRV ADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPP+PKFKF+DHPMLAREYERVRAGRPP+PLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQ+AQCLL+HQVLRLENLELMSKYGPD+WKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCQKNMEIQVACSQVEGQIQELRREAEEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELC+KNMEIQVACSQ+EGQIQELR EA EKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 257
           NLEVNVENGSVS P+S
Sbjct: 241 NLEVNVENGSVSFPMS 256

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BLAST of Spg036300 vs. ExPASy Swiss-Prot
Match: Q949S9 (Pre-mRNA-splicing factor SPF27 homolog OS=Arabidopsis thaliana OX=3702 GN=MOS4 PE=1 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 3.2e-88
Identity = 162/246 (65.85%), Postives = 204/246 (82.93%), Query Frame = 0


Query: 4   SNNNGDILMLEAPPQPAQPAWRVPADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRS 63
           + NNGD+LMLEA P+ A+P W   A+AEVIDALPYIDDDY +P +K+EVDRLVEEEMRRS
Sbjct: 2   ATNNGDVLMLEATPEAARP-WASAANAEVIDALPYIDDDYGNPLIKSEVDRLVEEEMRRS 61

Query: 64  SKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRPPVPLDV-ARYKLETPPPNKKNDE 123
           SK+PADFLKDLPP+PKF F + P+L +EYERVRAG+PPV +D  +RYKLE PP NK+ND+
Sbjct: 62  SKKPADFLKDLPPLPKFDFKNCPVLGKEYERVRAGKPPVRIDFESRYKLEMPPANKRNDD 121

Query: 124 TAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKI 183
            AWKQ LQK Q  L+ +++ LENLELMSK GP++W+Q+N +LE  L+RMQ+LAQEQNE+I
Sbjct: 122 AAWKQYLQKNQRSLQQKLIELENLELMSKLGPELWRQNNHRLEVFLTRMQRLAQEQNEEI 181

Query: 184 EKVNRERKFHQQNAAYELHALSTQWKELCQKNMEIQVACSQVEGQIQELRREAEEKGWNL 243
           EKVNRERK+HQQ  +YEL+ALS +W++LC KNMEIQ AC+ +E QI   ++EA E+GWNL
Sbjct: 182 EKVNRERKYHQQTTSYELNALSQEWRQLCVKNMEIQSACAMLETQIDSFKKEAAERGWNL 241

Query: 244 EVNVEN 249
           E  +EN
Sbjct: 242 EEKLEN 246

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BLAST of Spg036300 vs. ExPASy Swiss-Prot
Match: Q6PBE2 (Pre-mRNA-splicing factor SPF27 OS=Xenopus tropicalis OX=8364 GN=bcas2 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 9.2e-27
Identity = 74/212 (34.91%), Postives = 116/212 (54.72%), Query Frame = 0


Query: 32  VIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLARE 91
           V+DALPY D  Y    V+     LVEEE RR   RP        P P +   +  ++  E
Sbjct: 12  VVDALPYFDQGYDAQGVREAAAALVEEETRR--YRPTKNYLSYLPTPDYSAFETEIMRNE 71

Query: 92  YERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLELMSK 151
           +ER+ + +P   L + RY+L  P   ++ND TAW++ +  +   L HQ +R+ENLELMS+
Sbjct: 72  FERLSSRQPLELLSMKRYELPAPLSGQRNDITAWQECVNNSMAQLEHQAVRIENLELMSQ 131

Query: 152 YGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELC 211
           +G + WK +N+ L  ++   QK  Q+  +KI+ +N +RK  Q  A   L  + + W  L 
Sbjct: 132 HGCNAWKVYNENLLHMIDCAQKDLQKLRKKIQDLNWQRKNSQLTAGARLREMESTWVSLV 191

Query: 212 QKNMEIQVACSQVEGQIQELRREAEEKGWNLE 244
            KN EI+ A  Q+E ++ +L+  + E   N+E
Sbjct: 192 SKNYEIERAIVQMENEVYQLKERSGENKENIE 221

[Close]

BLAST of Spg036300 vs. ExPASy Swiss-Prot
Match: Q5RKQ0 (Pre-mRNA-splicing factor SPF27 OS=Danio rerio OX=7955 GN=bcas2 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-26
Identity = 71/202 (35.15%), Postives = 108/202 (53.47%), Query Frame = 0


Query: 33  IDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLAREY 92
           +DALPY D  Y    V+     LVEEE RR   RP        P P F   +  ++  E+
Sbjct: 13  VDALPYFDQGYDATGVREAAAALVEEETRR--YRPTKNYLSYLPTPDFSAFETEIMRNEF 72

Query: 93  ERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLELMSKY 152
           ER+ A +P   L + RY+L  P   +KND TAW+  +  +   L HQ +R+ENLELM++Y
Sbjct: 73  ERLAARQPMELLSMKRYELPAPSSGQKNDMTAWQDCVNNSMAQLEHQAVRIENLELMAQY 132

Query: 153 GPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELCQ 212
           G + WK  N  L  ++   QK  Q   ++I+ +N +RK  Q     +L  L + W  L  
Sbjct: 133 GTNAWKMSNDNLALMIENSQKELQNVRKEIQDLNWQRKNDQLAGGAKLRELESNWVSLVS 192

Query: 213 KNMEIQVACSQVEGQIQELRRE 235
           KN EI+ A  Q+E ++ +++++
Sbjct: 193 KNYEIERAIVQLENEVAQMKQQ 212

[Close]

BLAST of Spg036300 vs. ExPASy Swiss-Prot
Match: O75934 (Pre-mRNA-splicing factor SPF27 OS=Homo sapiens OX=9606 GN=BCAS2 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.0e-26
Identity = 72/206 (34.95%), Postives = 113/206 (54.85%), Query Frame = 0


Query: 32  VIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLARE 91
           V+DALPY D  Y  P V+     LVEEE RR   RP          P +   +  ++  E
Sbjct: 12  VVDALPYFDQGYEAPGVREAAAALVEEETRR--YRPTKNYLSYLTAPDYSAFETDIMRNE 71

Query: 92  YERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLELMSK 151
           +ER+ A +P   L + RY+L  P   +KND TAW++ +  +   L HQ +R+ENLELMS+
Sbjct: 72  FERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIENLELMSQ 131

Query: 152 YGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELC 211
           +G + WK +N+ L  ++   QK  Q+  + I+ +N +RK  Q  A  +L  + + W  L 
Sbjct: 132 HGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMESNWVSLV 191

Query: 212 QKNMEIQVACSQVEGQIQELRREAEE 238
            KN EI+    Q+E +I +++++  E
Sbjct: 192 SKNYEIERTIVQLENEIYQIKQQHGE 215

[Close]

BLAST of Spg036300 vs. ExPASy Swiss-Prot
Match: Q9D287 (Pre-mRNA-splicing factor SPF27 OS=Mus musculus OX=10090 GN=Bcas2 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.0e-26
Identity = 72/206 (34.95%), Postives = 113/206 (54.85%), Query Frame = 0


Query: 32  VIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPVPKFKFDDHPMLARE 91
           V+DALPY D  Y  P V+     LVEEE RR   RP          P +   +  ++  E
Sbjct: 12  VVDALPYFDQGYEAPGVREAAAALVEEETRR--YRPTKNYLSYLTAPDYSAFETDIMRNE 71

Query: 92  YERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLELMSK 151
           +ER+ A +P   L + RY+L  P   +KND TAW++ +  +   L HQ +R+ENLELMS+
Sbjct: 72  FERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIENLELMSQ 131

Query: 152 YGPDVWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELC 211
           +G + WK +N+ L  ++   QK  Q+  + I+ +N +RK  Q  A  +L  + + W  L 
Sbjct: 132 HGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMESNWVSLV 191

Query: 212 QKNMEIQVACSQVEGQIQELRREAEE 238
            KN EI+    Q+E +I +++++  E
Sbjct: 192 SKNYEIERTIVQLENEIYQIKQQHGE 215

[Close]

BLAST of Spg036300 vs. ExPASy TrEMBL
Match: A0A0A0LQG2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042680 PE=4 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 2.8e-135
Identity = 244/256 (95.31%), Postives = 252/256 (98.44%), Query Frame = 0


Query: 1   MATSNNNGDILMLEAPPQPAQPAWRVPADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA +NNNGDILMLEAPPQP+QPAWRV ADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPP+PKFKF+DHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQKAQCLLRHQVLRLENL+LMSKYGPD+WKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCQKNMEIQVACSQVEGQIQELRREAEEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELC+KNMEIQVAC Q+EGQIQELRREA EKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 257
           NLEVNVENGSVSLPVS
Sbjct: 241 NLEVNVENGSVSLPVS 256

[Close]

BLAST of Spg036300 vs. ExPASy TrEMBL
Match: A0A1S3CHH7 (pre-mRNA-splicing factor SPF27 homolog OS=Cucumis melo OX=3656 GN=LOC103500959 PE=4 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 1.4e-134
Identity = 243/256 (94.92%), Postives = 251/256 (98.05%), Query Frame = 0


Query: 1   MATSNNNGDILMLEAPPQPAQPAWRVPADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA +NNNGDILMLEAPPQP+QPAWRV ADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPP+PK KF+DHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQKAQCLLRHQVLRLENL+LMSKYGPD+WKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCQKNMEIQVACSQVEGQIQELRREAEEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELC+KNMEIQVAC Q+EGQIQELRREA EKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 257
           NLEVNVENGSVSLPVS
Sbjct: 241 NLEVNVENGSVSLPVS 256

[Close]

BLAST of Spg036300 vs. ExPASy TrEMBL
Match: A0A6J1EDE4 (pre-mRNA-splicing factor SPF27 homolog OS=Cucurbita moschata OX=3662 GN=LOC111431514 PE=4 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 7.6e-133
Identity = 239/256 (93.36%), Postives = 250/256 (97.66%), Query Frame = 0


Query: 1   MATSNNNGDILMLEAPPQPAQPAWRVPADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA +NN+GDILMLEAPPQP+QPAWRV ADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPP+PKFKF+DHPMLAREYERVRAGRPP+PLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQ+AQCLL+HQVLRLENLELMSKY PD+WKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYAPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCQKNMEIQVACSQVEGQIQELRREAEEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELC+KNMEIQVACSQ+EGQIQELR EA EKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 257
           NLEVNVENGSVS PVS
Sbjct: 241 NLEVNVENGSVSFPVS 256

[Close]

BLAST of Spg036300 vs. ExPASy TrEMBL
Match: A0A6J1CB04 (pre-mRNA-splicing factor SPF27 homolog OS=Momordica charantia OX=3673 GN=LOC111009059 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 6.4e-132
Identity = 237/256 (92.58%), Postives = 247/256 (96.48%), Query Frame = 0


Query: 1   MATSNNNGDILMLEAPPQPAQPAWRVPADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MAT++NNGDILMLEAPPQP+QP W V ADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MATNSNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRS KRPADFLKDLPPVPK KF+DHP+LAREYERVRAGRPPVPLDVARYKLETPPPNKKN
Sbjct: 61  RRSFKRPADFLKDLPPVPKVKFEDHPLLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQ+AQCLLRHQVLRLENLELMSKYGPD+WKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCQKNMEIQVACSQVEGQIQELRREAEEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWK+LC KNMEIQVACSQ+EGQIQELRREA E GW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGW 240

Query: 241 NLEVNVENGSVSLPVS 257
           NLE N+ENGSVSLPVS
Sbjct: 241 NLEANIENGSVSLPVS 256

[Close]

BLAST of Spg036300 vs. ExPASy TrEMBL
Match: A0A6J1KLZ4 (pre-mRNA-splicing factor SPF27 homolog OS=Cucurbita maxima OX=3661 GN=LOC111495390 PE=4 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 8.4e-132
Identity = 238/256 (92.97%), Postives = 249/256 (97.27%), Query Frame = 0


Query: 1   MATSNNNGDILMLEAPPQPAQPAWRVPADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA +NN+GDILMLEAPP P+QPAWRV ADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAINNNSGDILMLEAPPLPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPP+PKFKF+DHPMLAREYERVRAGRPP+PLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQ+AQCLL+HQVLRLENLELMSKYG D+WKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYGSDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCQKNMEIQVACSQVEGQIQELRREAEEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELC+KNMEIQVACSQ+EGQIQELR EA EKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 257
           NLEVNVENGSVS PVS
Sbjct: 241 NLEVNVENGSVSFPVS 256

[Close]

BLAST of Spg036300 vs. TAIR 10
Match: AT3G18165.1 (modifier of snc1,4 )

HSP 1 Score: 326.2 bits (835), Expect = 2.3e-89
Identity = 162/246 (65.85%), Postives = 204/246 (82.93%), Query Frame = 0


Query: 4   SNNNGDILMLEAPPQPAQPAWRVPADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRS 63
           + NNGD+LMLEA P+ A+P W   A+AEVIDALPYIDDDY +P +K+EVDRLVEEEMRRS
Sbjct: 2   ATNNGDVLMLEATPEAARP-WASAANAEVIDALPYIDDDYGNPLIKSEVDRLVEEEMRRS 61

Query: 64  SKRPADFLKDLPPVPKFKFDDHPMLAREYERVRAGRPPVPLDV-ARYKLETPPPNKKNDE 123
           SK+PADFLKDLPP+PKF F + P+L +EYERVRAG+PPV +D  +RYKLE PP NK+ND+
Sbjct: 62  SKKPADFLKDLPPLPKFDFKNCPVLGKEYERVRAGKPPVRIDFESRYKLEMPPANKRNDD 121

Query: 124 TAWKQTLQKAQCLLRHQVLRLENLELMSKYGPDVWKQHNKQLEALLSRMQKLAQEQNEKI 183
            AWKQ LQK Q  L+ +++ LENLELMSK GP++W+Q+N +LE  L+RMQ+LAQEQNE+I
Sbjct: 122 AAWKQYLQKNQRSLQQKLIELENLELMSKLGPELWRQNNHRLEVFLTRMQRLAQEQNEEI 181

Query: 184 EKVNRERKFHQQNAAYELHALSTQWKELCQKNMEIQVACSQVEGQIQELRREAEEKGWNL 243
           EKVNRERK+HQQ  +YEL+ALS +W++LC KNMEIQ AC+ +E QI   ++EA E+GWNL
Sbjct: 182 EKVNRERKYHQQTTSYELNALSQEWRQLCVKNMEIQSACAMLETQIDSFKKEAAERGWNL 241

Query: 244 EVNVEN 249
           E  +EN
Sbjct: 242 EEKLEN 246

The following BLAST results are available for this feature:

BLAST of Spg036300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137495.1	5.7e-135	95.31	pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus] >KGN64160.1 hypothetica...	[more]
XP_038893573.1	2.2e-134	94.92	pre-mRNA-splicing factor SPF27 homolog [Benincasa hispida]	[more]
XP_008462680.1	2.9e-134	94.92	PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Cucumis melo]	[more]
KAG6584331.1	3.2e-133	93.75	Pre-mRNA-splicing factor SPF27-like protein, partial [Cucurbita argyrosperma sub...	[more]
XP_023518986.1	7.0e-133	93.36	pre-mRNA-splicing factor SPF27 homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of Spg036300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q949S9	3.2e-88	65.85	Pre-mRNA-splicing factor SPF27 homolog OS=Arabidopsis thaliana OX=3702 GN=MOS4 P...	[more]
Q6PBE2	9.2e-27	34.91	Pre-mRNA-splicing factor SPF27 OS=Xenopus tropicalis OX=8364 GN=bcas2 PE=2 SV=1	[more]
Q5RKQ0	1.2e-26	35.15	Pre-mRNA-splicing factor SPF27 OS=Danio rerio OX=7955 GN=bcas2 PE=2 SV=1	[more]
O75934	2.0e-26	34.95	Pre-mRNA-splicing factor SPF27 OS=Homo sapiens OX=9606 GN=BCAS2 PE=1 SV=1	[more]
Q9D287	2.0e-26	34.95	Pre-mRNA-splicing factor SPF27 OS=Mus musculus OX=10090 GN=Bcas2 PE=1 SV=1	[more]

BLAST of Spg036300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQG2	2.8e-135	95.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042680 PE=4 SV=1	[more]
A0A1S3CHH7	1.4e-134	94.92	pre-mRNA-splicing factor SPF27 homolog OS=Cucumis melo OX=3656 GN=LOC103500959 P...	[more]
A0A6J1EDE4	7.6e-133	93.36	pre-mRNA-splicing factor SPF27 homolog OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1CB04	6.4e-132	92.58	pre-mRNA-splicing factor SPF27 homolog OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1KLZ4	8.4e-132	92.97	pre-mRNA-splicing factor SPF27 homolog OS=Cucurbita maxima OX=3661 GN=LOC1114953...	[more]

BLAST of Spg036300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18165.1	2.3e-89	65.85	modifier of snc1,4	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 157..195
None	No IPR available	COILS	Coil	Coil	coord: 214..234
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR13296:SF0	PRE-MRNA-SPLICING FACTOR SPF27	coord: 15..239
IPR008409	Pre-mRNA-splicing factor SPF27	PFAM	PF05700	BCAS2	coord: 31..237 e-value: 6.6E-74 score: 248.0
IPR008409	Pre-mRNA-splicing factor SPF27	PANTHER	PTHR13296	BCAS2 PROTEIN	coord: 15..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg036300.1	Spg036300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0002758	innate immune response-activating signal transduction
biological_process	GO:0006397	mRNA processing
biological_process	GO:0008380	RNA splicing
cellular_component	GO:0071013	catalytic step 2 spliceosome
cellular_component	GO:0000974	Prp19 complex