Spg036251 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg036251
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	D-aminoacyl-tRNA deacylase
Location	scaffold5: 41322950 .. 41324672 (+)
RNA-Seq Expression	Spg036251
Synteny	Spg036251

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTACCTACAATTTTACAAAATCCCGAAAAAGCAAAAAAAAGATGAATTGCGTAGCAAACCTGCCAGTGTTCGCAGCCAGCGTAGGTACCAAGCGAACCAGAGTGTTCAGCAACAAGAAAATACAGCCGATTAGATCCATGAGAGCTGTTGTTCAGAGAGTCACCTCTGCAAGCGTCGAGGTCAATTATCTCCTACCTCTCCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATGCTTTTCTAAATACTGCATTTCGCAGGTCGATGGGCGCACGGTTTCCGAGATTGGGCCCGGCCTCCTCGTGTTCGTCGGCCTTCATGACTCCGACTCCGATTCCGACGCCGAATACATGTACTGCTCTGTCTTCTATACTAATTCTATGCTCAGTTAAAACTTGTTCTTCTTACCACGAAGCTACTTCCTCCTTTTTAAACTGGTTTCAGATGCCGTAAGGTCCTGAATATGAGATTGTTCCCAAATGAGAGCACCGGCAAAGCTTGGGACTTAAACGTAATTATATATACTCTCCTTCCTCCCATTTCAATCCAATTAACAAGGGCTACGAGTTCTCTACTATTGTTGTTTCCCTATTCCAGAAACCAAAAGCTTCGAGATTTGCCTTACCATTTTCCTTGATATTTGTTGTAGGTAATGCAGAAAAACTACGAGGTTCTGTTAGGTAAATTTAAGGGAAGTGTTGATGGTTTAGTTTTCTAGTCTGAAATAGTACCTAGAATGTGAATTAGAGACAGAGTCAATCCACTTATTAAATTGTCCTCGGTGTATTGCAACCAGTTAGTCAGTTTACACTCTATGGGATGTTGAAGGGCAACAAGCCGGACTTTCATGTGGCAATGCCTCCCCAAAGAGCCAAACCCTTCTATGCTTCTGTGGTTGAGAGGTTTGGAAAATCCTATAACCCAGATGCTATCAAAGGTAATCTATGCTTCTTTCTTCTCCTAATTTCTGTTTCAATCTCTCTTCCGAATTGTAATGGTTCAGTCAGTATAACAAAGAGTTTACTGAATCTTGTCTCTGTTCCCTTTTCCTGTGGGCAGATGGAGTTTTTGGAGCAATGATGAAGGTAATCTCACAATGCTCAGTTTTGAATTCCAAGTAACTTTGATGTTTACTAGATTATACAGTTCTGATATTTTGGTCACTGATGTTTGAGAAGGTCAATTTGGTGAATGATGGGCCAGTCACAATGCAGATTGACTCCCAACCGTCTAAGTAAGCAAACCAACCAACTCATGAGCTCTCCTGCGTTGGGGAAATTGGTAATTTGACAGTGATTTTCATCAACTTTCATTTCAGGAATACAGTTGAAGCTCAAGAAGACTCATGATGGGTTACTATTGGATTCTACAATTTAAGATCTGGCTGTCGACTGTTTATGAGCTTACCAGTTGAAGATTGACTTGATGGGATGGAAGATTCTTTTCATTAAGGTGGAGATGCTTATATCCTCACTTTGTGCTAATTGCTATTTACTAATTTCTATCAGCCTTGGCAGTGGGGTTGTATGATGCTTTACTCAATGACAATATCGGTTATTTTTCTCATATCTTTCGATCTCTTATATCAAAGCAAGCCGCAAAGGCTTTGCTAAGAATCCTTATGGGGACTTAAAAAAATTATTCAGCTCCCTTGTTAGTTTTAGACCTATTCAATTCAAATCCTCATGCTTAAACAAATATCAGCTAAATCCAGACTCAAT

mRNA sequence

ATGAATTGCGTAGCAAACCTGCCAGTGTTCGCAGCCAGCGTAGGTACCAAGCGAACCAGAGTGTTCAGCAACAAGAAAATACAGCCGATTAGATCCATGAGAGCTGTTGTTCAGAGAGTCACCTCTGCAAGCGTCGAGGTCGATGGGCGCACGGTTTCCGAGATTGGGCCCGGCCTCCTCGTGTTCGTCGGCCTTCATGACTCCGACTCCGATTCCGACGCCGAATACATATGCCGTAAGGTCCTGAATATGAGATTGTTCCCAAATGAGAGCACCGGCAAAGCTTGGGACTTAAACGTAATGCAGAAAAACTACGAGGTTCTGTTAGTTAGTCAGTTTACACTCTATGGGATGTTGAAGGGCAACAAGCCGGACTTTCATGTGGCAATGCCTCCCCAAAGAGCCAAACCCTTCTATGCTTCTGTGGTTGAGAGGTTTGGAAAATCCTATAACCCAGATGCTATCAAAGATGGAGTTTTTGGAGCAATGATGAAGGTCAATTTGGTGAATGATGGGCCAGTCACAATGCAGATTGACTCCCAACCGTCTAAGAATACAGTTGAAGCTCAAGAAGACTCATGA

Coding sequence (CDS)

ATGAATTGCGTAGCAAACCTGCCAGTGTTCGCAGCCAGCGTAGGTACCAAGCGAACCAGAGTGTTCAGCAACAAGAAAATACAGCCGATTAGATCCATGAGAGCTGTTGTTCAGAGAGTCACCTCTGCAAGCGTCGAGGTCGATGGGCGCACGGTTTCCGAGATTGGGCCCGGCCTCCTCGTGTTCGTCGGCCTTCATGACTCCGACTCCGATTCCGACGCCGAATACATATGCCGTAAGGTCCTGAATATGAGATTGTTCCCAAATGAGAGCACCGGCAAAGCTTGGGACTTAAACGTAATGCAGAAAAACTACGAGGTTCTGTTAGTTAGTCAGTTTACACTCTATGGGATGTTGAAGGGCAACAAGCCGGACTTTCATGTGGCAATGCCTCCCCAAAGAGCCAAACCCTTCTATGCTTCTGTGGTTGAGAGGTTTGGAAAATCCTATAACCCAGATGCTATCAAAGATGGAGTTTTTGGAGCAATGATGAAGGTCAATTTGGTGAATGATGGGCCAGTCACAATGCAGATTGACTCCCAACCGTCTAAGAATACAGTTGAAGCTCAAGAAGACTCATGA

Protein sequence

MNCVANLPVFAASVGTKRTRVFSNKKIQPIRSMRAVVQRVTSASVEVDGRTVSEIGPGLLVFVGLHDSDSDSDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQIDSQPSKNTVEAQEDS

Homology

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BLAST of Spg036251 vs. NCBI nr
Match: XP_022140203.1 (D-tyrosyl-tRNA(Tyr) deacylase [Momordica charantia])

HSP 1 Score: 365.5 bits (937), Expect = 2.7e-97
Identity = 181/193 (93.78%), Postives = 187/193 (96.89%), Query Frame = 0


Query: 1   MNCVANLPVFAASVGTKRTRVFSNKKIQPIRSMRAVVQRVTSASVEVDGRTVSEIGPGLL 60
           MN VANLP++AASVGTKRTR+ SNKK QP RSMRAVVQRV SASV+VDGRTVSEIGPGLL
Sbjct: 1   MNSVANLPLYAASVGTKRTRLLSNKKTQPTRSMRAVVQRVVSASVQVDGRTVSEIGPGLL 60

Query: 61  VFVGLHDSDSDSDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGMLK 120
           V VGLH+SDSD+DAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGMLK
Sbjct: 61  VLVGLHESDSDADAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGMLK 120

Query: 121 GNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQIDS 180
           GNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQIDS
Sbjct: 121 GNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQIDS 180

Query: 181 QPSKNTVEAQEDS 194
           QPSKNTVEAQEDS
Sbjct: 181 QPSKNTVEAQEDS 193

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BLAST of Spg036251 vs. NCBI nr
Match: KGN64710.1 (hypothetical protein Csa_014221 [Cucumis sativus])

HSP 1 Score: 359.8 bits (922), Expect = 1.5e-95
Identity = 181/195 (92.82%), Postives = 186/195 (95.38%), Query Frame = 0


Query: 1   MNCVANLPVFAASVGTKRTRV--FSNKKIQPIRSMRAVVQRVTSASVEVDGRTVSEIGPG 60
           MN VANLP+FAASV TKRT V  FSN K++PIRSMRAVVQRV SASV+VDGRTVSEIGPG
Sbjct: 1   MNSVANLPLFAASVSTKRTTVFRFSNNKLRPIRSMRAVVQRVASASVQVDGRTVSEIGPG 60

Query: 61  LLVFVGLHDSDSDSDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGM 120
           LLV VGLHDSDSD+DAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGM
Sbjct: 61  LLVLVGLHDSDSDTDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGM 120

Query: 121 LKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQI 180
           LKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQI
Sbjct: 121 LKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQI 180

Query: 181 DSQPSKNTVEAQEDS 194
           DSQPSKNTVEA EDS
Sbjct: 181 DSQPSKNTVEASEDS 195

[Close]

BLAST of Spg036251 vs. NCBI nr
Match: XP_011653368.2 (D-aminoacyl-tRNA deacylase [Cucumis sativus])

HSP 1 Score: 359.8 bits (922), Expect = 1.5e-95
Identity = 181/195 (92.82%), Postives = 186/195 (95.38%), Query Frame = 0


Query: 1   MNCVANLPVFAASVGTKRTRV--FSNKKIQPIRSMRAVVQRVTSASVEVDGRTVSEIGPG 60
           MN VANLP+FAASV TKRT V  FSN K++PIRSMRAVVQRV SASV+VDGRTVSEIGPG
Sbjct: 47  MNSVANLPLFAASVSTKRTTVFRFSNNKLRPIRSMRAVVQRVASASVQVDGRTVSEIGPG 106

Query: 61  LLVFVGLHDSDSDSDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGM 120
           LLV VGLHDSDSD+DAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGM
Sbjct: 107 LLVLVGLHDSDSDTDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGM 166

Query: 121 LKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQI 180
           LKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQI
Sbjct: 167 LKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQI 226

Query: 181 DSQPSKNTVEAQEDS 194
           DSQPSKNTVEA EDS
Sbjct: 227 DSQPSKNTVEASEDS 241

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BLAST of Spg036251 vs. NCBI nr
Match: XP_008442903.1 (PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase [Cucumis melo] >KAA0057021.1 D-tyrosyl-tRNA(Tyr) deacylase [Cucumis melo var. makuwa])

HSP 1 Score: 355.9 bits (912), Expect = 2.2e-94
Identity = 178/196 (90.82%), Postives = 186/196 (94.90%), Query Frame = 0


Query: 1   MNCVANLPVFAASVGTKRTRVF---SNKKIQPIRSMRAVVQRVTSASVEVDGRTVSEIGP 60
           MN VANLP+FAASV TKRT +F   +N+K+ PIRSMRAVVQRV SASV+VDGRTVSEIGP
Sbjct: 1   MNSVANLPLFAASVSTKRTTLFRFSNNRKLHPIRSMRAVVQRVASASVQVDGRTVSEIGP 60

Query: 61  GLLVFVGLHDSDSDSDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYG 120
           GLLV VGLH+SDSD+DAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYG
Sbjct: 61  GLLVLVGLHESDSDADAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYG 120

Query: 121 MLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQ 180
           MLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQ
Sbjct: 121 MLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQ 180

Query: 181 IDSQPSKNTVEAQEDS 194
           IDSQPSKNTVEA EDS
Sbjct: 181 IDSQPSKNTVEASEDS 196

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BLAST of Spg036251 vs. NCBI nr
Match: XP_038894530.1 (D-aminoacyl-tRNA deacylase [Benincasa hispida])

HSP 1 Score: 354.4 bits (908), Expect = 6.3e-94
Identity = 176/193 (91.19%), Postives = 181/193 (93.78%), Query Frame = 0


Query: 1   MNCVANLPVFAASVGTKRTRVFSNKKIQPIRSMRAVVQRVTSASVEVDGRTVSEIGPGLL 60
           MN VANLP+FAASV TKRT +F N K+QPIRSMRAVVQRV SASVEVDGRTVSEIGPGLL
Sbjct: 1   MNSVANLPLFAASVSTKRTTLFGNNKLQPIRSMRAVVQRVASASVEVDGRTVSEIGPGLL 60

Query: 61  VFVGLHDSDSDSDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGMLK 120
           V VGLHDSDSD+DAEYICRKVLNMRLFPNEST +AWDLNVMQKNYEVLLVSQFTLYGMLK
Sbjct: 61  VLVGLHDSDSDADAEYICRKVLNMRLFPNESTARAWDLNVMQKNYEVLLVSQFTLYGMLK 120

Query: 121 GNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQIDS 180
           GNKPDFHVAMPP RAKPFYASVVERFGKSYNPD IKDGVFGAMMKVNLVNDGPVTMQIDS
Sbjct: 121 GNKPDFHVAMPPLRAKPFYASVVERFGKSYNPDLIKDGVFGAMMKVNLVNDGPVTMQIDS 180

Query: 181 QPSKNTVEAQEDS 194
           QPSKNTVE  EDS
Sbjct: 181 QPSKNTVEPPEDS 193

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BLAST of Spg036251 vs. ExPASy Swiss-Prot
Match: Q54EY1 (D-aminoacyl-tRNA deacylase OS=Dictyostelium discoideum OX=44689 GN=dtd PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 6.9e-43
Identity = 81/149 (54.36%), Postives = 108/149 (72.48%), Query Frame = 0


Query: 33  MRAVVQRVTSASVEVDGRTVSEIGPGLLVFVGLHDSDSDSDAEYICRKVLNMRLFPNEST 92
           M+A++QRV S+SV V+G  +SEI  GL+  +G+   D+  DAEYI RK+LN+RL+ NE  
Sbjct: 1   MKAIIQRVKSSSVTVEGEVISEIKQGLMCLIGIGRDDTKEDAEYITRKILNLRLWKNEDG 60

Query: 93  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 152
            K WD +V Q +YE+L VSQFTL+  LKGNK  +H+AM P+ +K FY   +E   KSY P
Sbjct: 61  TKNWDRSVQQMDYEILFVSQFTLFAQLKGNKQSYHLAMAPELSKQFYLDFLENAKKSYKP 120

Query: 153 DAIKDGVFGAMMKVNLVNDGPVTMQIDSQ 182
           + IKDG FGAMM V L+NDGPVT+Q+DS+
Sbjct: 121 EKIKDGRFGAMMDVQLINDGPVTIQLDSK 149

[Close]

BLAST of Spg036251 vs. ExPASy Swiss-Prot
Match: Q9DD18 (D-aminoacyl-tRNA deacylase 1 OS=Mus musculus OX=10090 GN=Dtd1 PE=1 SV=2)

HSP 1 Score: 169.9 bits (429), Expect = 2.9e-41
Identity = 82/148 (55.41%), Postives = 111/148 (75.00%), Query Frame = 0


Query: 33  MRAVVQRVTSASVEVDGRTVSEIGPGLLVFVGLHDSDSDSDAEYICRKVLNMRLFPNEST 92
           M+AVVQRVT ASV V G  +S IG G+ V +G+   DS  + E++ RK+LN+R+F +ES 
Sbjct: 1   MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISMEDSQKELEHMVRKILNLRVFEDES- 60

Query: 93  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 152
           GK W  +VM K YEVL VSQFTL  +LKGNKPDFH+AMP ++A+ FY S +E+  KSY P
Sbjct: 61  GKHWSKSVMDKEYEVLCVSQFTLQCVLKGNKPDFHLAMPTEQAESFYNSFLEQLRKSYRP 120

Query: 153 DAIKDGVFGAMMKVNLVNDGPVTMQIDS 181
           + I+DG FGA M+V++ NDGPVT++++S
Sbjct: 121 ELIRDGKFGAYMQVHIQNDGPVTIELES 147

[Close]

BLAST of Spg036251 vs. ExPASy Swiss-Prot
Match: Q8TEA8 (D-aminoacyl-tRNA deacylase 1 OS=Homo sapiens OX=9606 GN=DTD1 PE=1 SV=2)

HSP 1 Score: 167.5 bits (423), Expect = 1.4e-40
Identity = 80/148 (54.05%), Postives = 111/148 (75.00%), Query Frame = 0


Query: 33  MRAVVQRVTSASVEVDGRTVSEIGPGLLVFVGLHDSDSDSDAEYICRKVLNMRLFPNEST 92
           M+AVVQRVT ASV V G  +S IG G+ V +G+   D+  + E++ RK+LN+R+F +ES 
Sbjct: 1   MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDES- 60

Query: 93  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 152
           GK W  +VM K YE+L VSQFTL  +LKGNKPDFH+AMP ++A+ FY S +E+  K+Y P
Sbjct: 61  GKHWSKSVMDKQYEILCVSQFTLQCVLKGNKPDFHLAMPTEQAEGFYNSFLEQLRKTYRP 120

Query: 153 DAIKDGVFGAMMKVNLVNDGPVTMQIDS 181
           + IKDG FGA M+V++ NDGPVT++++S
Sbjct: 121 ELIKDGKFGAYMQVHIQNDGPVTIELES 147

[Close]

BLAST of Spg036251 vs. ExPASy Swiss-Prot
Match: Q2T9V8 (D-aminoacyl-tRNA deacylase 1 OS=Bos taurus OX=9913 GN=DTD1 PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.5e-40
Identity = 79/148 (53.38%), Postives = 110/148 (74.32%), Query Frame = 0


Query: 33  MRAVVQRVTSASVEVDGRTVSEIGPGLLVFVGLHDSDSDSDAEYICRKVLNMRLFPNEST 92
           M+AVVQRVT ASV V G  +S IG G+ V +G+   D+  + E++ RK+LN+R+F +ES 
Sbjct: 1   MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDES- 60

Query: 93  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 152
           GK W  +VM K YEVL VSQFTL  +LKGNKPDFH+AMP ++A+ FY   +E+  K+Y P
Sbjct: 61  GKHWSKSVMDKQYEVLCVSQFTLQCVLKGNKPDFHLAMPAEQAESFYKGFLEQLRKAYRP 120

Query: 153 DAIKDGVFGAMMKVNLVNDGPVTMQIDS 181
           + +KDG FGA M+V++ NDGPVT++++S
Sbjct: 121 ELVKDGKFGAYMQVHIQNDGPVTIELES 147

[Close]

BLAST of Spg036251 vs. ExPASy Swiss-Prot
Match: F1QGC8 (D-aminoacyl-tRNA deacylase 1 OS=Danio rerio OX=7955 GN=dtd1 PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.1e-39
Identity = 77/151 (50.99%), Postives = 110/151 (72.85%), Query Frame = 0


Query: 33  MRAVVQRVTSASVEVDGRTVSEIGPGLLVFVGLHDSDSDSDAEYICRKVLNMRLFPNEST 92
           M+A++QRVT ASV V    +S IG GL V +G+   D+  D +Y+ RK+LN+R+F +E+ 
Sbjct: 1   MKAIIQRVTRASVTVGEEQISSIGRGLCVLLGISVEDTQKDVDYMVRKILNLRVFEDEN- 60

Query: 93  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 152
           G+AW  +VM    EVL VSQFTL  +LKGNKPD+H AMP + A+PFY +++E+  ++Y P
Sbjct: 61  GRAWSRSVMDGELEVLCVSQFTLQCLLKGNKPDYHAAMPAELAQPFYNNMLEQLRETYKP 120

Query: 153 DAIKDGVFGAMMKVNLVNDGPVTMQIDSQPS 184
           + IKDG FGA M+V + NDGPVT+Q++S P+
Sbjct: 121 ELIKDGQFGAKMQVLIQNDGPVTIQLESPPA 150

[Close]

BLAST of Spg036251 vs. ExPASy TrEMBL
Match: A0A6J1CHG7 (D-aminoacyl-tRNA deacylase OS=Momordica charantia OX=3673 GN=LOC111010928 PE=3 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.3e-97
Identity = 181/193 (93.78%), Postives = 187/193 (96.89%), Query Frame = 0


Query: 1   MNCVANLPVFAASVGTKRTRVFSNKKIQPIRSMRAVVQRVTSASVEVDGRTVSEIGPGLL 60
           MN VANLP++AASVGTKRTR+ SNKK QP RSMRAVVQRV SASV+VDGRTVSEIGPGLL
Sbjct: 1   MNSVANLPLYAASVGTKRTRLLSNKKTQPTRSMRAVVQRVVSASVQVDGRTVSEIGPGLL 60

Query: 61  VFVGLHDSDSDSDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGMLK 120
           V VGLH+SDSD+DAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGMLK
Sbjct: 61  VLVGLHESDSDADAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGMLK 120

Query: 121 GNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQIDS 180
           GNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQIDS
Sbjct: 121 GNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQIDS 180

Query: 181 QPSKNTVEAQEDS 194
           QPSKNTVEAQEDS
Sbjct: 181 QPSKNTVEAQEDS 193

[Close]

BLAST of Spg036251 vs. ExPASy TrEMBL
Match: A0A0A0LS01 (D-aminoacyl-tRNA deacylase OS=Cucumis sativus OX=3659 GN=Csa_1G076620 PE=3 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 7.3e-96
Identity = 181/195 (92.82%), Postives = 186/195 (95.38%), Query Frame = 0


Query: 1   MNCVANLPVFAASVGTKRTRV--FSNKKIQPIRSMRAVVQRVTSASVEVDGRTVSEIGPG 60
           MN VANLP+FAASV TKRT V  FSN K++PIRSMRAVVQRV SASV+VDGRTVSEIGPG
Sbjct: 1   MNSVANLPLFAASVSTKRTTVFRFSNNKLRPIRSMRAVVQRVASASVQVDGRTVSEIGPG 60

Query: 61  LLVFVGLHDSDSDSDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGM 120
           LLV VGLHDSDSD+DAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGM
Sbjct: 61  LLVLVGLHDSDSDTDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGM 120

Query: 121 LKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQI 180
           LKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQI
Sbjct: 121 LKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQI 180

Query: 181 DSQPSKNTVEAQEDS 194
           DSQPSKNTVEA EDS
Sbjct: 181 DSQPSKNTVEASEDS 195

[Close]

BLAST of Spg036251 vs. ExPASy TrEMBL
Match: A0A5A7UU37 (D-aminoacyl-tRNA deacylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002050 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.1e-94
Identity = 178/196 (90.82%), Postives = 186/196 (94.90%), Query Frame = 0


Query: 1   MNCVANLPVFAASVGTKRTRVF---SNKKIQPIRSMRAVVQRVTSASVEVDGRTVSEIGP 60
           MN VANLP+FAASV TKRT +F   +N+K+ PIRSMRAVVQRV SASV+VDGRTVSEIGP
Sbjct: 1   MNSVANLPLFAASVSTKRTTLFRFSNNRKLHPIRSMRAVVQRVASASVQVDGRTVSEIGP 60

Query: 61  GLLVFVGLHDSDSDSDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYG 120
           GLLV VGLH+SDSD+DAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYG
Sbjct: 61  GLLVLVGLHESDSDADAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYG 120

Query: 121 MLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQ 180
           MLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQ
Sbjct: 121 MLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQ 180

Query: 181 IDSQPSKNTVEAQEDS 194
           IDSQPSKNTVEA EDS
Sbjct: 181 IDSQPSKNTVEASEDS 196

[Close]

BLAST of Spg036251 vs. ExPASy TrEMBL
Match: A0A1S3B6T2 (D-aminoacyl-tRNA deacylase OS=Cucumis melo OX=3656 GN=LOC103486664 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.1e-94
Identity = 178/196 (90.82%), Postives = 186/196 (94.90%), Query Frame = 0


Query: 1   MNCVANLPVFAASVGTKRTRVF---SNKKIQPIRSMRAVVQRVTSASVEVDGRTVSEIGP 60
           MN VANLP+FAASV TKRT +F   +N+K+ PIRSMRAVVQRV SASV+VDGRTVSEIGP
Sbjct: 1   MNSVANLPLFAASVSTKRTTLFRFSNNRKLHPIRSMRAVVQRVASASVQVDGRTVSEIGP 60

Query: 61  GLLVFVGLHDSDSDSDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYG 120
           GLLV VGLH+SDSD+DAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYG
Sbjct: 61  GLLVLVGLHESDSDADAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYG 120

Query: 121 MLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQ 180
           MLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQ
Sbjct: 121 MLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQ 180

Query: 181 IDSQPSKNTVEAQEDS 194
           IDSQPSKNTVEA EDS
Sbjct: 181 IDSQPSKNTVEASEDS 196

[Close]

BLAST of Spg036251 vs. ExPASy TrEMBL
Match: A0A6J1EH34 (D-aminoacyl-tRNA deacylase OS=Cucurbita moschata OX=3662 GN=LOC111434135 PE=3 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.5e-93
Identity = 179/194 (92.27%), Postives = 183/194 (94.33%), Query Frame = 0


Query: 1   MNCVANLPVFAASVGTKRTRVFSNK-KIQPIRSMRAVVQRVTSASVEVDGRTVSEIGPGL 60
           MN VA LP+FAASVGTKRT VFSNK KIQPIRSMRAVVQRV SASVEVDGRTVSEIGPGL
Sbjct: 1   MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGL 60

Query: 61  LVFVGLHDSDSDSDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGML 120
           LV VGLHDSDS+SDAEYICRKVLNMRLFPN+STGKAWDLNVMQKNYEVLLVSQFTLYGML
Sbjct: 61  LVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLVSQFTLYGML 120

Query: 121 KGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQID 180
           KGNKPDFHVAMPPQRAKPFYASVVERFGK Y PDAIKDGVFGAMMKVNLVNDGPVTMQI+
Sbjct: 121 KGNKPDFHVAMPPQRAKPFYASVVERFGKYYTPDAIKDGVFGAMMKVNLVNDGPVTMQIE 180

Query: 181 SQPSKNTVEAQEDS 194
           SQPSKN VEA E S
Sbjct: 181 SQPSKNMVEASEGS 194

[Close]

BLAST of Spg036251 vs. TAIR 10
Match: AT4G18460.1 (D-Tyr-tRNA(Tyr) deacylase family protein )

HSP 1 Score: 260.0 bits (663), Expect = 1.5e-69
Identity = 121/151 (80.13%), Postives = 139/151 (92.05%), Query Frame = 0


Query: 33  MRAVVQRVTSASVEVDGRTVSEIGPGLLVFVGLHDSDSDSDAEYICRKVLNMRLFPNEST 92
           MRAV+QRV+S+SV VDGR VSEIGPGLLV +G+H+SD++SDA+YICRKVLNMRLF NE+T
Sbjct: 1   MRAVIQRVSSSSVTVDGRIVSEIGPGLLVLIGIHESDTESDADYICRKVLNMRLFSNETT 60

Query: 93  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 152
           GK WD NVMQ+NY VLLVSQFTLYG LKGNKPDFHVAMPP +AKPFYAS+VE+F K+YNP
Sbjct: 61  GKGWDQNVMQRNYGVLLVSQFTLYGFLKGNKPDFHVAMPPDKAKPFYASLVEKFQKAYNP 120

Query: 153 DAIKDGVFGAMMKVNLVNDGPVTMQIDSQPS 184
           DA+KDGVFGAMM+VNLVNDGPVTMQ+DS  S
Sbjct: 121 DAVKDGVFGAMMQVNLVNDGPVTMQLDSPQS 151

The following BLAST results are available for this feature:

BLAST of Spg036251 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140203.1	2.7e-97	93.78	D-tyrosyl-tRNA(Tyr) deacylase [Momordica charantia]	[more]
KGN64710.1	1.5e-95	92.82	hypothetical protein Csa_014221 [Cucumis sativus]	[more]
XP_011653368.2	1.5e-95	92.82	D-aminoacyl-tRNA deacylase [Cucumis sativus]	[more]
XP_008442903.1	2.2e-94	90.82	PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase [Cucumis melo] >KAA0057021.1 D-tyrosyl-...	[more]
XP_038894530.1	6.3e-94	91.19	D-aminoacyl-tRNA deacylase [Benincasa hispida]	[more]

BLAST of Spg036251 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54EY1	6.9e-43	54.36	D-aminoacyl-tRNA deacylase OS=Dictyostelium discoideum OX=44689 GN=dtd PE=3 SV=1	[more]
Q9DD18	2.9e-41	55.41	D-aminoacyl-tRNA deacylase 1 OS=Mus musculus OX=10090 GN=Dtd1 PE=1 SV=2	[more]
Q8TEA8	1.4e-40	54.05	D-aminoacyl-tRNA deacylase 1 OS=Homo sapiens OX=9606 GN=DTD1 PE=1 SV=2	[more]
Q2T9V8	2.5e-40	53.38	D-aminoacyl-tRNA deacylase 1 OS=Bos taurus OX=9913 GN=DTD1 PE=2 SV=1	[more]
F1QGC8	2.1e-39	50.99	D-aminoacyl-tRNA deacylase 1 OS=Danio rerio OX=7955 GN=dtd1 PE=1 SV=1	[more]

BLAST of Spg036251 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CHG7	1.3e-97	93.78	D-aminoacyl-tRNA deacylase OS=Momordica charantia OX=3673 GN=LOC111010928 PE=3 S...	[more]
A0A0A0LS01	7.3e-96	92.82	D-aminoacyl-tRNA deacylase OS=Cucumis sativus OX=3659 GN=Csa_1G076620 PE=3 SV=1	[more]
A0A5A7UU37	1.1e-94	90.82	D-aminoacyl-tRNA deacylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3B6T2	1.1e-94	90.82	D-aminoacyl-tRNA deacylase OS=Cucumis melo OX=3656 GN=LOC103486664 PE=3 SV=1	[more]
A0A6J1EH34	1.5e-93	92.27	D-aminoacyl-tRNA deacylase OS=Cucurbita moschata OX=3662 GN=LOC111434135 PE=3 SV...	[more]

BLAST of Spg036251 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18460.1	1.5e-69	80.13	D-Tyr-tRNA(Tyr) deacylase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003732	D-aminoacyl-tRNA deacylase DTD	PFAM	PF02580	Tyr_Deacylase	coord: 34..179 e-value: 9.6E-50 score: 168.8
IPR003732	D-aminoacyl-tRNA deacylase DTD	TIGRFAM	TIGR00256	TIGR00256	coord: 33..180 e-value: 1.3E-42 score: 143.7
IPR003732	D-aminoacyl-tRNA deacylase DTD	PANTHER	PTHR10472	D-TYROSYL-TRNA TYR DEACYLASE	coord: 33..191
IPR003732	D-aminoacyl-tRNA deacylase DTD	HAMAP	MF_00518	Deacylase_Dtd	coord: 33..180 score: 27.706511
IPR003732	D-aminoacyl-tRNA deacylase DTD	CDD	cd00563	Dtyr_deacylase	coord: 33..180 e-value: 3.02936E-76 score: 223.305
IPR023509	D-aminoacyl-tRNA deacylase-like superfamily	GENE3D	3.50.80.10		coord: 33..186 e-value: 7.9E-64 score: 216.4
IPR023509	D-aminoacyl-tRNA deacylase-like superfamily	SUPERFAMILY	69500	DTD-like	coord: 32..180
None	No IPR available	PANTHER	PTHR10472:SF5	D-AMINOACYL-TRNA DEACYLASE 1	coord: 33..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg036251.1	Spg036251.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0106074	aminoacyl-tRNA metabolism involved in translational fidelity
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0051500	D-tyrosyl-tRNA(Tyr) deacylase activity
molecular_function	GO:0000049	tRNA binding
molecular_function	GO:0002161	aminoacyl-tRNA editing activity
molecular_function	GO:0051499	D-aminoacyl-tRNA deacylase activity