Spg036132 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg036132
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Dynein light chain, type 1/2
Location	scaffold5: 45625421 .. 45627724 (-)
RNA-Seq Expression	Spg036132
Synteny	Spg036132

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAACCCACCAACCAGCTGCGCATCTTAGCGCCTCCTGACCCTGATTCTCCTCCTTTTAAAGCCCCTTTCAGAGCTCCTTCCTCTGATTCAATGGCTAATCTCTCCACCTCTGCAAAACTTGAATCCACCATGGCTGCTGCTCCTCCTAAGCCCTCTCCCTTGTCCAACCACATCCCATTTTCGAGACTGCACAGTCAAACGGTGGTTTCATCTCAAAGGCCAAAGAGTTCGAACCCAGCTCCAGTTGTGACTGTTTCTTCTATGGTCAAATCAAAACCCCACCTCCAGAAAATGGCTTCTGGTGGGGATGAGAAATTGAGTAAGATGTGTAGAGAGTTGGGTGGGAAGAAGTTTTTTGATGAGAAGAATGGGGTTGATGATGGGAAAGGTCTCTGTCTTGTGGTGAAGGAGAAGGAGAAGGAGAAGGAATTGAAAGAGCCTCAAAAGGGGCATCGTCTTGACAGTTTGAGACCAACAGTTTCTTTACTTCGAAAGGGTGGGAGAAGAAAGTCCTTTCCTGGCTCTCAAGTTGAATTGGCTGATATCTTTGCCAAAAATGGCGTGAAAGTGGTTTCTGTTGACATGCCACCAGCTATGCAGATCCATGCTGTGGATTGTGCAAGAAAGGCTCATGATAGTATGGAGAAGTTCACTTCCAAGACACTTGCTTTATCTCTCAAGAGGGTAATTAGTTTAAGGTTTGTTTATGTGTAAATCTTGAAGTTTTTTAGAATGATTGGCTAATAACTTTTCTGGGTTGCTTGCTTGCTTGCTTGTGATTTTTCAGGAATTTGATGGGGTATACGGTCCGGCCTGGCACTGCATCGTGGGGACAAGTTTTGGGTCTTTTGTGACTCATTCAGTCGGTGGTTTCTTATACTTCTCAATGGACCAAAAGCTGTATATTCTATTGTTCAAAACTTCCGTACAAAGAGCTGAATGAAGTAGATGTCCAAACGCACAGCTGGGAAATCCAATAAGTTTGGCATATTAGAGTTTAAGAAAGGTAAAAGAGACCGTTCATCCTAATACTTGTACATTGGTTATGATAAGAAAGAAACACAACAGCAATACAAAATATTCCCCTACAATTTGTTTAGGGATCTCTTACAAGCTGTTTACAGAACAATTTTTATTGCAATGATTGAGGTTTAGTGATAGAATAACCCTTTCTTTACAGCTCAAAAACCCCATTCTCTTACATATTCTTTTCTAGTTTCACTACTAACTCTTTCTTTTTGGATTGCATACACATAATCTCTCTATTTCCCTGCAAAGATTGTAGACAACCATTTCAGTCAATCTTTTGTGCTACCGATCTGCGTCGAATCTTTTCAACTCAAATGGTCTGTGATTCATCATTAGTAAAGGATATCATACAAGATTAAGACTGAATTATGCATTTTTGGTTCTTGTTCTGAAATGGGGTTTTTGTAGAGCTTTCACTTCCCCACCTGATTTTGTACAACCCAGCATGTTAGATCTGGACATTGGACAGGCCAAGGAGAGAGCTCCTTACCCCACCCTCCTTTTTTTTAACTTTCTATGTTGTAAAGTTTCTTTCTTCAGCTGGTCATATGAGTTATTACTTAGCTGAAAATGATAGTAGGCAGGCCCACAGCTTTTATGTTTGATATTGGATGCACATTCTTCTTTGACCGCTACATGTGCATCCTTATTTATAGCTCCTTATTTTGAAGATTGGACTATTGATTTTGGCTCTTTCTGGAAGTTGGAAAAATTATCCCTTAGTTTTGCATTGTTATTGAATTTGGTGGGAGGATGGGACCCTTAGGTCGGTTGTGTCCCTAGTCAATATATTAGGCTTCTTTTGTTGAAAATTTGATGGCCAAGGACAAAAGTGACTAAGCATTGTTAGTTGAAATTCCTTCTTGCTAGATCAATTAATGACAAAGAATAAGATATCTATCTGCATTCAAAAAGATTGGCCTCTTCCCCTTCCAAGTTTCACAATTAGTAAATGGGAGGATACCAATTAAAAATTCCATATTGCTGTCATTTTAATAAACTCGAAAAGACATTTAGGGGAGGGGATTATGACTTTAAAAAATCTCTTGAATCATACAACTCTAACATTTGTCACATTGTAAGTGGGATGAAAGCTAACCAAACTCCTTGCCGTTCTGGTTTCCCTTGAGGTTCTATCATTGATCCAGCTATGCCCTCAAAAAGAAGGAATATTGGCCCTTTTCTTTCTCTTCCTCTTTGGCTTTTGATATGTAAATCCAAAAGCACTTTCTTTAGCACCATTTCCACACTTCTGAGTTTGATGGGTCA

mRNA sequence

ATGGCGAAACCCACCAACCAGCTGCGCATCTTAGCGCCTCCTGACCCTGATTCTCCTCCTTTTAAAGCCCCTTTCAGAGCTCCTTCCTCTGATTCAATGGCTAATCTCTCCACCTCTGCAAAACTTGAATCCACCATGGCTGCTGCTCCTCCTAAGCCCTCTCCCTTGTCCAACCACATCCCATTTTCGAGACTGCACAGTCAAACGGTGGTTTCATCTCAAAGGCCAAAGAGTTCGAACCCAGCTCCAGTTGTGACTGTTTCTTCTATGGTCAAATCAAAACCCCACCTCCAGAAAATGGCTTCTGGTGGGGATGAGAAATTGAGTAAGATGTGTAGAGAGTTGGGTGGGAAGAAGTTTTTTGATGAGAAGAATGGGGTTGATGATGGGAAAGGTCTCTGTCTTGTGGTGAAGGAGAAGGAGAAGGAGAAGGAATTGAAAGAGCCTCAAAAGGGGCATCGTCTTGACAGTTTGAGACCAACAGTTTCTTTACTTCGAAAGGGTGGGAGAAGAAAGTCCTTTCCTGGCTCTCAAGTTGAATTGGCTGATATCTTTGCCAAAAATGGCGTGAAAGTGGTTTCTGTTGACATGCCACCAGCTATGCAGATCCATGCTGTGGATTGTGCAAGAAAGGCTCATGATAGTATGGAGAAGTTCACTTCCAAGACACTTGCTTTATCTCTCAAGAGGGTAATTAGTTTAAGGAATTTGATGGGGTATACGGTCCGGCCTGGCACTGCATCGTGGGGACAAGTTTTGGGTCTTTTGTGA

Coding sequence (CDS)

ATGGCGAAACCCACCAACCAGCTGCGCATCTTAGCGCCTCCTGACCCTGATTCTCCTCCTTTTAAAGCCCCTTTCAGAGCTCCTTCCTCTGATTCAATGGCTAATCTCTCCACCTCTGCAAAACTTGAATCCACCATGGCTGCTGCTCCTCCTAAGCCCTCTCCCTTGTCCAACCACATCCCATTTTCGAGACTGCACAGTCAAACGGTGGTTTCATCTCAAAGGCCAAAGAGTTCGAACCCAGCTCCAGTTGTGACTGTTTCTTCTATGGTCAAATCAAAACCCCACCTCCAGAAAATGGCTTCTGGTGGGGATGAGAAATTGAGTAAGATGTGTAGAGAGTTGGGTGGGAAGAAGTTTTTTGATGAGAAGAATGGGGTTGATGATGGGAAAGGTCTCTGTCTTGTGGTGAAGGAGAAGGAGAAGGAGAAGGAATTGAAAGAGCCTCAAAAGGGGCATCGTCTTGACAGTTTGAGACCAACAGTTTCTTTACTTCGAAAGGGTGGGAGAAGAAAGTCCTTTCCTGGCTCTCAAGTTGAATTGGCTGATATCTTTGCCAAAAATGGCGTGAAAGTGGTTTCTGTTGACATGCCACCAGCTATGCAGATCCATGCTGTGGATTGTGCAAGAAAGGCTCATGATAGTATGGAGAAGTTCACTTCCAAGACACTTGCTTTATCTCTCAAGAGGGTAATTAGTTTAAGGAATTTGATGGGGTATACGGTCCGGCCTGGCACTGCATCGTGGGGACAAGTTTTGGGTCTTTTGTGA

Protein sequence

MAKPTNQLRILAPPDPDSPPFKAPFRAPSSDSMANLSTSAKLESTMAAAPPKPSPLSNHIPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKPHLQKMASGGDEKLSKMCRELGGKKFFDEKNGVDDGKGLCLVVKEKEKEKELKEPQKGHRLDSLRPTVSLLRKGGRRKSFPGSQVELADIFAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKRVISLRNLMGYTVRPGTASWGQVLGLL

Homology

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BLAST of Spg036132 vs. NCBI nr
Match: XP_022924012.1 (uncharacterized protein LOC111431561 [Cucurbita moschata])

HSP 1 Score: 333.2 bits (853), Expect = 2.0e-87
Identity = 187/239 (78.24%), Postives = 201/239 (84.10%), Query Frame = 0


Query: 1   MAKPTNQLRILAPPDPDSPPFKAPFRAPSSDSMA-NLSTSAKLESTMAAA---PPKPSPL 60
           MAKPTNQLRILAPPDPDSPP K PFRAP S SMA N ST AKL+S +AAA   PP PSPL
Sbjct: 1   MAKPTNQLRILAPPDPDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAAAPPPPNPSPL 60

Query: 61  SNHIPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKPHLQKMASGGDEKLSKMCRELG 120
           SNHIPFS+LH Q+  SSQ+PK+ NP P +TVS+MVKSKPHLQK+ASGGDEKLSK+C+E+G
Sbjct: 61  SNHIPFSKLHRQSDFSSQKPKNPNPPPPLTVSTMVKSKPHLQKIASGGDEKLSKLCKEMG 120

Query: 121 GKKFFDEK----NGV-DDGKGLCLVVKEKEKEKELKEPQKGHRLDSLRPTVSLLRKGGRR 180
            KKFFDEK     GV DD K L LVV  KEKEKELKEPQKGH L +LRPTVSLLRK GRR
Sbjct: 121 TKKFFDEKKEANKGVNDDSKALYLVV--KEKEKELKEPQKGHGLHTLRPTVSLLRKDGRR 180

Query: 181 KSFPGSQVELADIFAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR 231
           +S    QVELADI AKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR
Sbjct: 181 RSLADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR 237

[Close]

BLAST of Spg036132 vs. NCBI nr
Match: XP_023520376.1 (uncharacterized protein LOC111783690 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 332.4 bits (851), Expect = 3.4e-87
Identity = 187/238 (78.57%), Postives = 200/238 (84.03%), Query Frame = 0


Query: 1   MAKPTNQLRILAPPDPDSPPFKAPFRAPSSDSMA-NLSTSAKLESTMAAA--PPKPSPLS 60
           MAKPTNQLRILAPPDPDSPP K PFRAP S SMA N ST AKL+S +AAA  PP PSPLS
Sbjct: 1   MAKPTNQLRILAPPDPDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAASPPPNPSPLS 60

Query: 61  NHIPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKPHLQKMASGGDEKLSKMCRELGG 120
           NHIPFS+LH Q   SSQ+PK+SNP P +TVS+MVKSKPHLQK+ASG DEKLSK+C+E+G 
Sbjct: 61  NHIPFSKLHRQPGFSSQKPKNSNPPPALTVSAMVKSKPHLQKIASGEDEKLSKLCKEMGT 120

Query: 121 KKFFDEK----NGV-DDGKGLCLVVKEKEKEKELKEPQKGHRLDSLRPTVSLLRKGGRRK 180
           KKFFDEK     GV DD K L LVV  KEKEKELKEPQKGH L +LRPTVSLLRK GRR+
Sbjct: 121 KKFFDEKKEANKGVDDDSKALYLVV--KEKEKELKEPQKGHGLHTLRPTVSLLRKDGRRR 180

Query: 181 SFPGSQVELADIFAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR 231
           S    QVELADI AKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR
Sbjct: 181 SLADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR 236

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BLAST of Spg036132 vs. NCBI nr
Match: KAG7019845.1 (hypothetical protein SDJN02_18810, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 332.0 bits (850), Expect = 4.5e-87
Identity = 187/240 (77.92%), Postives = 200/240 (83.33%), Query Frame = 0


Query: 1   MAKPTNQLRILAPPDPDSPPFKAPFRAPSSDSMA-NLSTSAKLESTMAAA----PPKPSP 60
           MAKPTNQLRILAPPDPDSPP K PFRAP S SMA N ST AKL+S +AAA    PP PSP
Sbjct: 1   MAKPTNQLRILAPPDPDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAAAPPPPPNPSP 60

Query: 61  LSNHIPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKPHLQKMASGGDEKLSKMCREL 120
           LSNHIPFS+LH Q   SSQ+PK+SNP P +TV +MVKSKPHLQK+ASGGDEKLSK+C+E+
Sbjct: 61  LSNHIPFSKLHRQPGFSSQKPKNSNPPPPLTVPTMVKSKPHLQKIASGGDEKLSKLCKEM 120

Query: 121 GGKKFFDEK----NGV-DDGKGLCLVVKEKEKEKELKEPQKGHRLDSLRPTVSLLRKGGR 180
           G KKFFDEK     GV DD K L LVV  KEKEKELKEPQKGH L +LRPTVSLLRK GR
Sbjct: 121 GTKKFFDEKKEANKGVDDDSKALYLVV--KEKEKELKEPQKGHGLHTLRPTVSLLRKDGR 180

Query: 181 RKSFPGSQVELADIFAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR 231
           R+S    QVELADI AKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR
Sbjct: 181 RRSLADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR 238

[Close]

BLAST of Spg036132 vs. NCBI nr
Match: XP_023000852.1 (uncharacterized protein LOC111495174 [Cucurbita maxima])

HSP 1 Score: 329.7 bits (844), Expect = 2.2e-86
Identity = 186/238 (78.15%), Postives = 198/238 (83.19%), Query Frame = 0


Query: 1   MAKPTNQLRILAPPDPDSPPFKAPFRAPSSDSMA-NLSTSAKLESTMAAA--PPKPSPLS 60
           MAKPTNQLRILAPPDPDSPP K PFRAP S SMA N ST AKL+S +AAA  PP PSPLS
Sbjct: 1   MAKPTNQLRILAPPDPDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAASSPPNPSPLS 60

Query: 61  NHIPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKPHLQKMASGGDEKLSKMCRELGG 120
           NHIPFS LH Q    SQ+PK+SNP P +TV +MVKSKPHLQK+ASGGDEKLSK+C+E+G 
Sbjct: 61  NHIPFSELHRQPGCLSQKPKNSNPPPSLTVPTMVKSKPHLQKIASGGDEKLSKLCKEMGT 120

Query: 121 KKFFDEK----NGV-DDGKGLCLVVKEKEKEKELKEPQKGHRLDSLRPTVSLLRKGGRRK 180
           KKFFDEK     GV DD K L LVV  KEKEKELKEPQKGH L +LRPTVSLLRK GRR+
Sbjct: 121 KKFFDEKKEANKGVDDDSKALYLVV--KEKEKELKEPQKGHGLHTLRPTVSLLRKDGRRR 180

Query: 181 SFPGSQVELADIFAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR 231
           S    QVELADI AKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR
Sbjct: 181 SLADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR 236

[Close]

BLAST of Spg036132 vs. NCBI nr
Match: KAG6584250.1 (hypothetical protein SDJN03_20182, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 328.6 bits (841), Expect = 4.9e-86
Identity = 186/239 (77.82%), Postives = 199/239 (83.26%), Query Frame = 0


Query: 1   MAKPTNQLRILAPPDPDSPPFKAPFRAPSSDSMA-NLSTSAKLESTMAAA---PPKPSPL 60
           MAKPTNQLRILAPPDPDSP  K PFRAP S SMA N ST AKL+S +AAA   PP PSPL
Sbjct: 1   MAKPTNQLRILAPPDPDSPLLKPPFRAPPSASMANNHSTPAKLDSAIAAAAPPPPNPSPL 60

Query: 61  SNHIPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKPHLQKMASGGDEKLSKMCRELG 120
           SNHIPFS+LH Q   SSQ+PK+ NP P +TVS+MVKSKPHLQK+ASGGDEKLSK+C+E+G
Sbjct: 61  SNHIPFSKLHRQPGFSSQKPKNPNPPPPLTVSTMVKSKPHLQKIASGGDEKLSKLCKEMG 120

Query: 121 GKKFFDEK----NGV-DDGKGLCLVVKEKEKEKELKEPQKGHRLDSLRPTVSLLRKGGRR 180
            KKFFDEK     GV DD K L LVV  KEKEKELKEPQKGH L +LRPTVSLLRK GRR
Sbjct: 121 TKKFFDEKKEANKGVDDDSKALYLVV--KEKEKELKEPQKGHGLHTLRPTVSLLRKDGRR 180

Query: 181 KSFPGSQVELADIFAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR 231
           +S    QVELADI AKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR
Sbjct: 181 RSLADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR 237

[Close]

BLAST of Spg036132 vs. ExPASy TrEMBL
Match: A0A6J1E7P6 (uncharacterized protein LOC111431561 OS=Cucurbita moschata OX=3662 GN=LOC111431561 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 9.7e-88
Identity = 187/239 (78.24%), Postives = 201/239 (84.10%), Query Frame = 0


Query: 1   MAKPTNQLRILAPPDPDSPPFKAPFRAPSSDSMA-NLSTSAKLESTMAAA---PPKPSPL 60
           MAKPTNQLRILAPPDPDSPP K PFRAP S SMA N ST AKL+S +AAA   PP PSPL
Sbjct: 1   MAKPTNQLRILAPPDPDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAAAPPPPNPSPL 60

Query: 61  SNHIPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKPHLQKMASGGDEKLSKMCRELG 120
           SNHIPFS+LH Q+  SSQ+PK+ NP P +TVS+MVKSKPHLQK+ASGGDEKLSK+C+E+G
Sbjct: 61  SNHIPFSKLHRQSDFSSQKPKNPNPPPPLTVSTMVKSKPHLQKIASGGDEKLSKLCKEMG 120

Query: 121 GKKFFDEK----NGV-DDGKGLCLVVKEKEKEKELKEPQKGHRLDSLRPTVSLLRKGGRR 180
            KKFFDEK     GV DD K L LVV  KEKEKELKEPQKGH L +LRPTVSLLRK GRR
Sbjct: 121 TKKFFDEKKEANKGVNDDSKALYLVV--KEKEKELKEPQKGHGLHTLRPTVSLLRKDGRR 180

Query: 181 KSFPGSQVELADIFAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR 231
           +S    QVELADI AKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR
Sbjct: 181 RSLADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR 237

[Close]

BLAST of Spg036132 vs. ExPASy TrEMBL
Match: A0A6J1KET7 (uncharacterized protein LOC111495174 OS=Cucurbita maxima OX=3661 GN=LOC111495174 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 1.1e-86
Identity = 186/238 (78.15%), Postives = 198/238 (83.19%), Query Frame = 0


Query: 1   MAKPTNQLRILAPPDPDSPPFKAPFRAPSSDSMA-NLSTSAKLESTMAAA--PPKPSPLS 60
           MAKPTNQLRILAPPDPDSPP K PFRAP S SMA N ST AKL+S +AAA  PP PSPLS
Sbjct: 1   MAKPTNQLRILAPPDPDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAASSPPNPSPLS 60

Query: 61  NHIPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKPHLQKMASGGDEKLSKMCRELGG 120
           NHIPFS LH Q    SQ+PK+SNP P +TV +MVKSKPHLQK+ASGGDEKLSK+C+E+G 
Sbjct: 61  NHIPFSELHRQPGCLSQKPKNSNPPPSLTVPTMVKSKPHLQKIASGGDEKLSKLCKEMGT 120

Query: 121 KKFFDEK----NGV-DDGKGLCLVVKEKEKEKELKEPQKGHRLDSLRPTVSLLRKGGRRK 180
           KKFFDEK     GV DD K L LVV  KEKEKELKEPQKGH L +LRPTVSLLRK GRR+
Sbjct: 121 KKFFDEKKEANKGVDDDSKALYLVV--KEKEKELKEPQKGHGLHTLRPTVSLLRKDGRRR 180

Query: 181 SFPGSQVELADIFAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR 231
           S    QVELADI AKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR
Sbjct: 181 SLADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR 236

[Close]

BLAST of Spg036132 vs. ExPASy TrEMBL
Match: A0A5D3BH95 (Dynein light chain, type 1/2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003270 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 3.9e-81
Identity = 178/239 (74.48%), Postives = 193/239 (80.75%), Query Frame = 0


Query: 1   MAKPTNQLRILAPPDPDSPPFKAPFRAPSSDSMA-NLSTSAKLESTMAAAPPKPSPLSNH 60
           MAKPTNQ R LAPPD DSPP K  FRA SS S+A N ST  KL+S++AA  P PS LS H
Sbjct: 1   MAKPTNQQRSLAPPDHDSPPLKPIFRATSSASIANNHSTLLKLDSSIAAV-PNPSSLSTH 60

Query: 61  IPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKPHLQKMASGGDEKLSKMCRELGGKK 120
           IPFS+LHSQ   SSQR K+ NP P  TVSSM+KSKPHLQK+ SGGDEK SK+CRELG KK
Sbjct: 61  IPFSKLHSQAGFSSQRSKNLNPPPAPTVSSMLKSKPHLQKIPSGGDEKFSKVCRELGRKK 120

Query: 121 FFDEKNGVDDG---KGLCLVVKEKE-----KEKELKEPQKGHRLDSLRPTVSLLRKGGRR 180
           FFD+K   +DG   KGLCLVVKEKE     +EKELKEPQKG ++ SLRPTVSLLRK GRR
Sbjct: 121 FFDDKKETNDGFDKKGLCLVVKEKEEKEEKEEKELKEPQKGQKIVSLRPTVSLLRKSGRR 180

Query: 181 KSFPGSQVELADIFAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR 231
           KSF  SQVEL+DIFAKNGVKVVSVDM PAMQIHAVDCARK HDSMEKFTSKTLALSLKR
Sbjct: 181 KSFAVSQVELSDIFAKNGVKVVSVDMQPAMQIHAVDCARKTHDSMEKFTSKTLALSLKR 238

[Close]

BLAST of Spg036132 vs. ExPASy TrEMBL
Match: A0A1S3AVF4 (uncharacterized protein LOC103483107 OS=Cucumis melo OX=3656 GN=LOC103483107 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 3.9e-81
Identity = 178/239 (74.48%), Postives = 193/239 (80.75%), Query Frame = 0


Query: 1   MAKPTNQLRILAPPDPDSPPFKAPFRAPSSDSMA-NLSTSAKLESTMAAAPPKPSPLSNH 60
           MAKPTNQ R LAPPD DSPP K  FRA SS S+A N ST  KL+S++AA  P PS LS H
Sbjct: 1   MAKPTNQQRSLAPPDHDSPPLKPIFRATSSASIANNHSTLLKLDSSIAAV-PNPSSLSTH 60

Query: 61  IPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKPHLQKMASGGDEKLSKMCRELGGKK 120
           IPFS+LHSQ   SSQR K+ NP P  TVSSM+KSKPHLQK+ SGGDEK SK+CRELG KK
Sbjct: 61  IPFSKLHSQAGFSSQRSKNLNPPPAPTVSSMLKSKPHLQKIPSGGDEKFSKVCRELGRKK 120

Query: 121 FFDEKNGVDDG---KGLCLVVKEKE-----KEKELKEPQKGHRLDSLRPTVSLLRKGGRR 180
           FFD+K   +DG   KGLCLVVKEKE     +EKELKEPQKG ++ SLRPTVSLLRK GRR
Sbjct: 121 FFDDKKETNDGFDKKGLCLVVKEKEEKEEKEEKELKEPQKGQKIVSLRPTVSLLRKSGRR 180

Query: 181 KSFPGSQVELADIFAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR 231
           KSF  SQVEL+DIFAKNGVKVVSVDM PAMQIHAVDCARK HDSMEKFTSKTLALSLKR
Sbjct: 181 KSFAVSQVELSDIFAKNGVKVVSVDMQPAMQIHAVDCARKTHDSMEKFTSKTLALSLKR 238

[Close]

BLAST of Spg036132 vs. ExPASy TrEMBL
Match: A0A0A0LW58 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045690 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 3.1e-78
Identity = 176/237 (74.26%), Postives = 193/237 (81.43%), Query Frame = 0


Query: 1   MAKPTNQLRILAPPD-PDSPPFKAPFRAPSSDSMA-NLSTSAKLESTMAAAPPKPSPLSN 60
           MAKPTNQ R LAPPD  DSPP K  FRA SS S+A N S  +KL+S++AA  P PS LS 
Sbjct: 1   MAKPTNQHRSLAPPDHDDSPPLKPIFRATSSASIANNHSMLSKLDSSIAAV-PNPSSLST 60

Query: 61  HIPFSRLHSQTVVSSQRPKSSNPAPVVTVSSMVKSKPHLQKMASGGDEKLSKMCRELGGK 120
           HIPFS LHSQT  SSQR K+ NP P ++VSSM+KSKPHLQK+ SGGDEKLSK+CRELG K
Sbjct: 61  HIPFSTLHSQTGFSSQRSKNLNPPPALSVSSMLKSKPHLQKIPSGGDEKLSKVCRELGRK 120

Query: 121 KFFDEKNGVDDG---KGLCLVVKEKE--KEKELKEPQKGHRLDSLRPTVSLLRKGGRRKS 180
           KFF EK   +DG   KGLCLVVK+KE  +EKELKEPQK  ++ SLRPTVSLLRK GRRKS
Sbjct: 121 KFFYEKKETNDGFDKKGLCLVVKQKEEKEEKELKEPQKEQKIVSLRPTVSLLRKSGRRKS 180

Query: 181 FPGSQVELADIFAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR 231
           F  SQVEL+DIFAKNGVKVVSVDM PAMQIHAVDCARK HDSMEKFTSKTLALSLKR
Sbjct: 181 FAVSQVELSDIFAKNGVKVVSVDMQPAMQIHAVDCARKTHDSMEKFTSKTLALSLKR 236

[Close]

BLAST of Spg036132 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 46.6 bits (109), Expect = 3.5e-05
Identity = 21/41 (51.22%), Postives = 30/41 (73.17%), Query Frame = 0


Query: 190 VKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKTLALSLKR 231
           V++++ DMP  MQ HA  CAR   DS+EKF+SK +A +LK+
Sbjct: 117 VRILAADMPGFMQAHAFRCARMTLDSLEKFSSKHMAFNLKK 157

The following BLAST results are available for this feature:

BLAST of Spg036132 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022924012.1	2.0e-87	78.24	uncharacterized protein LOC111431561 [Cucurbita moschata]	[more]
XP_023520376.1	3.4e-87	78.57	uncharacterized protein LOC111783690 [Cucurbita pepo subsp. pepo]	[more]
KAG7019845.1	4.5e-87	77.92	hypothetical protein SDJN02_18810, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023000852.1	2.2e-86	78.15	uncharacterized protein LOC111495174 [Cucurbita maxima]	[more]
KAG6584250.1	4.9e-86	77.82	hypothetical protein SDJN03_20182, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Spg036132 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg036132 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E7P6	9.7e-88	78.24	uncharacterized protein LOC111431561 OS=Cucurbita moschata OX=3662 GN=LOC1114315...	[more]
A0A6J1KET7	1.1e-86	78.15	uncharacterized protein LOC111495174 OS=Cucurbita maxima OX=3661 GN=LOC111495174...	[more]
A0A5D3BH95	3.9e-81	74.48	Dynein light chain, type 1/2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3AVF4	3.9e-81	74.48	uncharacterized protein LOC103483107 OS=Cucumis melo OX=3656 GN=LOC103483107 PE=...	[more]
A0A0A0LW58	3.1e-78	74.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045690 PE=4 SV=1	[more]

BLAST of Spg036132 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20110.1	3.5e-05	51.22	Dynein light chain type 1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..84
None	No IPR available	PANTHER	PTHR11886:SF80	INTRASTRAND CROSS-LINK RECOGNITION PROTEIN-LIKE	coord: 45..230
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 45..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg036132.1	Spg036132.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0030286	dynein complex
molecular_function	GO:0045505	dynein intermediate chain binding
molecular_function	GO:0051959	dynein light intermediate chain binding