Spg036117 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAACTTACAAAGCGCAATTCGCAACAACGACTTTAACTGCCAACGACGAGGCTCTTCCCATCATCTTGGGGATTCGATCAGAGAGGATGGCTTGAATCTCAGTGAAGGCACAGAAATTGGGCATGGCTTCCAAAATCAACCTCAGAATCCATGTATTGGTATCGACTAGCTTAAAATTTTACTATCTTGGTCTTTTTTTCCTAGACTCAACAGAGTGATAATGTAGTTTACTTGGTTTAATTATGTTATGCTTGACGTGGTGTATGTATGTGTAATGTTCAGGTCAACCAACAACGGATGAGCATTCAGTTCACAATCTCCTGTATCTGGCAGCACTCACAGGTAACTGGCGCAAAGCGAAATCTTTGATCGATGCACATCCATGGGATATACATGTTGAACTAAACTATCGAAAGGAGACAGCTCTTCACATTGCTGTTATAGCACAACGGACAAGTTTTGTTGAGAAGTTGGTGAAAAGAATGGCGCCAGACGACTTGGCACGGCCAACCATAAGTGGTTATAGGGCCCTTTTGTTTTGCTGCTATGTCAGGAATTGTAAGAATGGCTGATCAGGTCCTAGTGGAAAGGAATCCCGACCTACCATTTTTGAGTGGCTGTAATGGTTCAGTCCCAATTTATCTTGCAGTATTGTACAAACACAAAAATATGGCCTACTATCTCCTCTCCGTGACTGATTTAGCCAGATTAAAGATTCAGGAAAGAATTGACCGTTTTCATGCTACCATCTCCTCTGATTATTACGGTTAATATGTCTCATCTCTTTACTCTTTTTGTAATCTTGGTTTGACCAAACATACACACGCTTAATTGGATATCATGTAAATGAATTATGATTTCTTTTCTCAACAGATATTGGATTGGAGATTCTCCAAAGAAACCCCAATTTAGCATTGAAAAGGAGTAGATTTAACGGTGAGACGGCATTACATATACTAGCGCAAAAGCCATATGCAATGATGCAATTGGTAGCCGAGAGCAGCTAG ATGGAAAACTTACAAAGCGCAATTCGCAACAACGACTTTAACTGCCAACGACGAGGCTCTTCCCATCATCTTGGGGATTCGATCAGAGAGGATGGCTTGAATCTCAGTGAAGGCACAGAAATTGGGCATGGCTTCCAAAATCAACCTCAGAATCCATGTATTGGTCAACCAACAACGGATGAGCATTCAGTTCACAATCTCCTGTATCTGGCAGCACTCACAGGTAACTGGCGCAAAGCGAAATCTTTGATCGATGCACATCCATGGGATATACATGTTGAACTAAACTATCGAAAGGAGACAGCTCTTCACATTGCTGTTATAGCACAACGGACAAGTTTTGTTGAGAAGTTGGTGAAAAGAATGGCGCCAGACGACTTGGCACGGCCAACCATAAGTGGTTATAGGGCCCTTTTGTTTTGCTGCTATGTCAGGAATTATATTGGATTGGAGATTCTCCAAAGAAACCCCAATTTAGCATTGAAAAGGAGTAGATTTAACGGTGAGACGGCATTACATATACTAGCGCAAAAGCCATATGCAATGATGCAATTGGTAGCCGAGAGCAGCTAG ATGGAAAACTTACAAAGCGCAATTCGCAACAACGACTTTAACTGCCAACGACGAGGCTCTTCCCATCATCTTGGGGATTCGATCAGAGAGGATGGCTTGAATCTCAGTGAAGGCACAGAAATTGGGCATGGCTTCCAAAATCAACCTCAGAATCCATGTATTGGTCAACCAACAACGGATGAGCATTCAGTTCACAATCTCCTGTATCTGGCAGCACTCACAGGTAACTGGCGCAAAGCGAAATCTTTGATCGATGCACATCCATGGGATATACATGTTGAACTAAACTATCGAAAGGAGACAGCTCTTCACATTGCTGTTATAGCACAACGGACAAGTTTTGTTGAGAAGTTGGTGAAAAGAATGGCGCCAGACGACTTGGCACGGCCAACCATAAGTGGTTATAGGGCCCTTTTGTTTTGCTGCTATGTCAGGAATTATATTGGATTGGAGATTCTCCAAAGAAACCCCAATTTAGCATTGAAAAGGAGTAGATTTAACGGTGAGACGGCATTACATATACTAGCGCAAAAGCCATATGCAATGATGCAATTGGTAGCCGAGAGCAGCTAG MENLQSAIRNNDFNCQRRGSSHHLGDSIREDGLNLSEGTEIGHGFQNQPQNPCIGQPTTDEHSVHNLLYLAALTGNWRKAKSLIDAHPWDIHVELNYRKETALHIAVIAQRTSFVEKLVKRMAPDDLARPTISGYRALLFCCYVRNYIGLEILQRNPNLALKRSRFNGETALHILAQKPYAMMQLVAESS Homology
BLAST of Spg036117 vs. NCBI nr
Match: XP_022137352.1 (uncharacterized protein LOC111008827 isoform X2 [Momordica charantia]) HSP 1 Score: 91.7 bits (226), Expect = 7.5e-15 Identity = 50/124 (40.32%), Postives = 76/124 (61.29%), Query Frame = 0
BLAST of Spg036117 vs. NCBI nr
Match: CBI30987.3 (unnamed protein product, partial [Vitis vinifera]) HSP 1 Score: 85.9 bits (211), Expect = 4.1e-13 Identity = 51/133 (38.35%), Postives = 71/133 (53.38%), Query Frame = 0
BLAST of Spg036117 vs. NCBI nr
Match: XP_011462376.1 (PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X2 [Fragaria vesca subsp. vesca]) HSP 1 Score: 85.1 bits (209), Expect = 7.1e-13 Identity = 58/178 (32.58%), Postives = 89/178 (50.00%), Query Frame = 0
BLAST of Spg036117 vs. NCBI nr
Match: XP_030942514.1 (ankyrin repeat-containing protein ITN1-like [Quercus lobata]) HSP 1 Score: 81.6 bits (200), Expect = 7.8e-12 Identity = 51/132 (38.64%), Postives = 75/132 (56.82%), Query Frame = 0
BLAST of Spg036117 vs. NCBI nr
Match: KAF3948799.1 (hypothetical protein CMV_025248 [Castanea mollissima]) HSP 1 Score: 81.3 bits (199), Expect = 1.0e-11 Identity = 48/123 (39.02%), Postives = 70/123 (56.91%), Query Frame = 0
BLAST of Spg036117 vs. ExPASy TrEMBL
Match: A0A6J1C813 (uncharacterized protein LOC111008827 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008827 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 3.6e-15 Identity = 50/124 (40.32%), Postives = 76/124 (61.29%), Query Frame = 0
BLAST of Spg036117 vs. ExPASy TrEMBL
Match: F6HLW7 (ANK_REP_REGION domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_10s0003g04510 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 2.0e-13 Identity = 51/133 (38.35%), Postives = 71/133 (53.38%), Query Frame = 0
BLAST of Spg036117 vs. ExPASy TrEMBL
Match: A0A7N2MW85 (ANK_REP_REGION domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 3.8e-12 Identity = 51/132 (38.64%), Postives = 75/132 (56.82%), Query Frame = 0
BLAST of Spg036117 vs. ExPASy TrEMBL
Match: A0A5J5B1R9 (ANK_REP_REGION domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_029665 PE=3 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 6.4e-12 Identity = 58/182 (31.87%), Postives = 76/182 (41.76%), Query Frame = 0
BLAST of Spg036117 vs. ExPASy TrEMBL
Match: A0A7N2MWM1 (ANK_REP_REGION domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 3.2e-11 Identity = 47/118 (39.83%), Postives = 68/118 (57.63%), Query Frame = 0
BLAST of Spg036117 vs. TAIR 10
Match: AT3G54070.1 (Ankyrin repeat family protein ) HSP 1 Score: 61.2 bits (147), Expect = 1.0e-09 Identity = 36/122 (29.51%), Postives = 56/122 (45.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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