Spg036051 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg036051
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	DNA polymerase epsilon catalytic subunit
Location	scaffold5: 41701316 .. 41702200 (-)
RNA-Seq Expression	Spg036051
Synteny	Spg036051

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCGTGATGCAGGATGATTTTAATGGTGGAGGATGTGAGCCTTCTTCATCATTGCATTTTGAAGACATTGTCAAAAATGTGGATTACCAAGGATGTCTTGAAATGAAGAAGCTAAAGTGGAAGGATACTTTGGACAAGAGGAAGAACCAAAGGTATGTTATATTCAGTCATAACTTACAGAGACTAATTCTGGAGGCTGAGAATTTCCATGCAATTGGTATTTGATACCATCTTCAAAATCAAAATATTGATCAATGAAGAATACCTTTAAAAGAATCTGAAATAAATATAAAAGGGGAAATTTATGCAATGTGTTATAGAGATACTAAGTGCTTCTCGTTTTTGTGGTGCAGGTCTTCCTTTTGGCCTTTTTTTCTTCATGTAGCCTTCAATTCTCTTGTACTTTTATCCTTCCAAATGAAATTAGGTTTCCATATTTGAAAAAAATAATAAATAAAGGCTCTATGTAGGTGACATGGTTTGCATTTTGCAAGTTTAAGTGTATTTTGGCTACAGTGGCAGTTTATGTTTAAGCAGAATATCATTTTTTTGGGCAGATTGATAGATTTAAGAACTCCACTTCCTCTTAATGGTGTTTCACAGGAGTTAAATTGTGGTATGAATGATAAAGAGGCTGCTGCAATAACATGCGTTGGTTCATCTTTCAAGAGGCATGAAAATTCTATAACACGCTGCCATTGGCAAGTATGATAGTTTTTGTTTCTTTTTAGTGTTTGTCTAGATATATTAATTTGTTTTTACTCACTTGACCTCGTCTTGTATTATCAGATTTTACAGCTTGTTCATAGTTCACAGAGTGACCAATATTTTGCTTCGGCTGTTGTTGAAGGAGTTATGCTAAAGATTCCTATTACGGTTCCTTAG

mRNA sequence

TCCGTGATGCAGGATGATTTTAATGGTGGAGGATGTGAGCCTTCTTCATCATTGCATTTTGAAGACATTGTCAAAAATGTGGATTACCAAGGATGTCTTGAAATGAAGAAGCTAAAGTGGAAGGATACTTTGGACAAGAGGAAGAACCAAAGATTGATAGATTTAAGAACTCCACTTCCTCTTAATGGTGTTTCACAGGAGTTAAATTGTGGTATGAATGATAAAGAGGCTGCTGCAATAACATGCGTTGGTTCATCTTTCAAGAGGCATGAAAATTCTATAACACGCTGCCATTGGCAAATTTTACAGCTTGTTCATAGTTCACAGAGTGACCAATATTTTGCTTCGGCTGTTGTTGAAGGAGTTATGCTAAAGATTCCTATTACGGTTCCTTAG

Coding sequence (CDS)

TCCGTGATGCAGGATGATTTTAATGGTGGAGGATGTGAGCCTTCTTCATCATTGCATTTTGAAGACATTGTCAAAAATGTGGATTACCAAGGATGTCTTGAAATGAAGAAGCTAAAGTGGAAGGATACTTTGGACAAGAGGAAGAACCAAAGATTGATAGATTTAAGAACTCCACTTCCTCTTAATGGTGTTTCACAGGAGTTAAATTGTGGTATGAATGATAAAGAGGCTGCTGCAATAACATGCGTTGGTTCATCTTTCAAGAGGCATGAAAATTCTATAACACGCTGCCATTGGCAAATTTTACAGCTTGTTCATAGTTCACAGAGTGACCAATATTTTGCTTCGGCTGTTGTTGAAGGAGTTATGCTAAAGATTCCTATTACGGTTCCTTAG

Protein sequence

SVMQDDFNGGGCEPSSSLHFEDIVKNVDYQGCLEMKKLKWKDTLDKRKNQRLIDLRTPLPLNGVSQELNCGMNDKEAAAITCVGSSFKRHENSITRCHWQILQLVHSSQSDQYFASAVVEGVMLKIPITVP

Homology

[Close]

BLAST of Spg036051 vs. NCBI nr
Match: XP_022153062.1 (DNA polymerase epsilon catalytic subunit A-like isoform X2 [Momordica charantia])

HSP 1 Score: 196.4 bits (498), Expect = 1.5e-46
Identity = 98/131 (74.81%), Postives = 107/131 (81.68%), Query Frame = 0


Query: 1    SVMQDDFNGGGCEPSSSLHFEDIVKNVDYQGCLEMKKLKWKDTLDKRKNQRLIDLRTPLP 60
            SV Q +FNGGGCEPSS LH E++ KNVDY G LEMKK KWKDTLDKRK QRL++LRT LP
Sbjct: 1220 SVRQVNFNGGGCEPSSPLHVENVDKNVDYHGWLEMKKRKWKDTLDKRKKQRLVNLRTSLP 1279

Query: 61   LNGVSQELNCGMNDKEAAAITCVGSSFKRHENSITRCHWQILQLVHSSQSDQYFASAVVE 120
             N V+ ELN  MN+KE    + VGS FKRHE SITRCHWQILQLVHSSQS Q+FA AVVE
Sbjct: 1280 ANDVTWELNAAMNNKETPRTSGVGSYFKRHEVSITRCHWQILQLVHSSQSGQFFAWAVVE 1339

Query: 121  GVMLKIPITVP 132
            GVMLKIPITVP
Sbjct: 1340 GVMLKIPITVP 1350

[Close]

BLAST of Spg036051 vs. NCBI nr
Match: XP_022153061.1 (DNA polymerase epsilon catalytic subunit A-like isoform X1 [Momordica charantia])

HSP 1 Score: 196.4 bits (498), Expect = 1.5e-46
Identity = 98/131 (74.81%), Postives = 107/131 (81.68%), Query Frame = 0


Query: 1    SVMQDDFNGGGCEPSSSLHFEDIVKNVDYQGCLEMKKLKWKDTLDKRKNQRLIDLRTPLP 60
            SV Q +FNGGGCEPSS LH E++ KNVDY G LEMKK KWKDTLDKRK QRL++LRT LP
Sbjct: 1220 SVRQVNFNGGGCEPSSPLHVENVDKNVDYHGWLEMKKRKWKDTLDKRKKQRLVNLRTSLP 1279

Query: 61   LNGVSQELNCGMNDKEAAAITCVGSSFKRHENSITRCHWQILQLVHSSQSDQYFASAVVE 120
             N V+ ELN  MN+KE    + VGS FKRHE SITRCHWQILQLVHSSQS Q+FA AVVE
Sbjct: 1280 ANDVTWELNAAMNNKETPRTSGVGSYFKRHEVSITRCHWQILQLVHSSQSGQFFAWAVVE 1339

Query: 121  GVMLKIPITVP 132
            GVMLKIPITVP
Sbjct: 1340 GVMLKIPITVP 1350

[Close]

BLAST of Spg036051 vs. NCBI nr
Match: XP_038901114.1 (DNA polymerase epsilon catalytic subunit A-like isoform X1 [Benincasa hispida])

HSP 1 Score: 189.1 bits (479), Expect = 2.4e-44
Identity = 96/131 (73.28%), Postives = 105/131 (80.15%), Query Frame = 0


Query: 1    SVMQDDFNGGGCEPSSSLHFEDIVKNVDYQGCLEMKKLKWKDTLDKRKNQRLIDLRTPLP 60
            S MQ++FN GGCEPSS LH E+I KNVDY G LEMKK KWKDTLDKRK QRL+ LRTPL 
Sbjct: 1223 SEMQENFNDGGCEPSSPLHVENIDKNVDYSGWLEMKKRKWKDTLDKRKKQRLVSLRTPLA 1282

Query: 61   LNGVSQELNCGMNDKEAAAITCVGSSFKRHENSITRCHWQILQLVHSSQSDQYFASAVVE 120
             N V +ELN   N+KEA+  T VGS FKRHE S+TRCHWQILQLVHS+QS QYFA AVV 
Sbjct: 1283 ANNVMRELNDATNNKEASR-TGVGSYFKRHEGSVTRCHWQILQLVHSTQSGQYFAWAVVG 1342

Query: 121  GVMLKIPITVP 132
            GVMLKIPI VP
Sbjct: 1343 GVMLKIPINVP 1352

[Close]

BLAST of Spg036051 vs. NCBI nr
Match: XP_038901115.1 (DNA polymerase epsilon catalytic subunit A-like isoform X2 [Benincasa hispida])

HSP 1 Score: 189.1 bits (479), Expect = 2.4e-44
Identity = 96/131 (73.28%), Postives = 105/131 (80.15%), Query Frame = 0


Query: 1    SVMQDDFNGGGCEPSSSLHFEDIVKNVDYQGCLEMKKLKWKDTLDKRKNQRLIDLRTPLP 60
            S MQ++FN GGCEPSS LH E+I KNVDY G LEMKK KWKDTLDKRK QRL+ LRTPL 
Sbjct: 1223 SEMQENFNDGGCEPSSPLHVENIDKNVDYSGWLEMKKRKWKDTLDKRKKQRLVSLRTPLA 1282

Query: 61   LNGVSQELNCGMNDKEAAAITCVGSSFKRHENSITRCHWQILQLVHSSQSDQYFASAVVE 120
             N V +ELN   N+KEA+  T VGS FKRHE S+TRCHWQILQLVHS+QS QYFA AVV 
Sbjct: 1283 ANNVMRELNDATNNKEASR-TGVGSYFKRHEGSVTRCHWQILQLVHSTQSGQYFAWAVVG 1342

Query: 121  GVMLKIPITVP 132
            GVMLKIPI VP
Sbjct: 1343 GVMLKIPINVP 1352

[Close]

BLAST of Spg036051 vs. NCBI nr
Match: XP_038901116.1 (DNA polymerase epsilon catalytic subunit A-like isoform X3 [Benincasa hispida])

HSP 1 Score: 189.1 bits (479), Expect = 2.4e-44
Identity = 96/131 (73.28%), Postives = 105/131 (80.15%), Query Frame = 0


Query: 1   SVMQDDFNGGGCEPSSSLHFEDIVKNVDYQGCLEMKKLKWKDTLDKRKNQRLIDLRTPLP 60
           S MQ++FN GGCEPSS LH E+I KNVDY G LEMKK KWKDTLDKRK QRL+ LRTPL 
Sbjct: 806 SEMQENFNDGGCEPSSPLHVENIDKNVDYSGWLEMKKRKWKDTLDKRKKQRLVSLRTPLA 865

Query: 61  LNGVSQELNCGMNDKEAAAITCVGSSFKRHENSITRCHWQILQLVHSSQSDQYFASAVVE 120
            N V +ELN   N+KEA+  T VGS FKRHE S+TRCHWQILQLVHS+QS QYFA AVV 
Sbjct: 866 ANNVMRELNDATNNKEASR-TGVGSYFKRHEGSVTRCHWQILQLVHSTQSGQYFAWAVVG 925

Query: 121 GVMLKIPITVP 132
           GVMLKIPI VP
Sbjct: 926 GVMLKIPINVP 935

[Close]

BLAST of Spg036051 vs. ExPASy Swiss-Prot
Match: F4HW04 (DNA polymerase epsilon catalytic subunit A OS=Arabidopsis thaliana OX=3702 GN=POL2A PE=1 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.7e-21
Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 0


Query: 18   LHFEDIVKNVDYQGCLEMKKLKWKDTLDKRKNQRLIDLRTPLPLNGVSQELNCGMNDKEA 77
            + F++I K+V+YQG LE+KK KWK TL+K+K +RL DLR+       +Q     +N K  
Sbjct: 1222 ISFQNIDKSVNYQGWLELKKRKWKVTLEKKKKRRLGDLRSS------NQVDTHEINQKVG 1281

Query: 78   AAITCVGSSFKRHENSITRCHWQILQLVHSSQSDQYFASAVVEGVMLKIPITVP 132
                 VGS F+R E ++T  HWQI+QLV S QS Q+FA  VVEG+MLKIP+++P
Sbjct: 1282 QGRGGVGSYFRRPEEALTSSHWQIIQLVPSPQSGQFFAWVVVEGLMLKIPLSIP 1329

[Close]

BLAST of Spg036051 vs. ExPASy Swiss-Prot
Match: F4IFN6 (DNA polymerase epsilon catalytic subunit B OS=Arabidopsis thaliana OX=3702 GN=POL2B PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.5e-17
Identity = 52/114 (45.61%), Postives = 70/114 (61.40%), Query Frame = 0


Query: 18   LHFEDIVKNVDYQGCLEMKKLKWKDTLDKRKNQRLIDLRTPLPLNGVSQELNCGMNDKEA 77
            +  +++ KNVDYQG LE++K KWK TL  +K +R         L G   E N  +N K  
Sbjct: 1206 ISLQNVDKNVDYQGWLELEKRKWKMTLTNKKKRRYSS-----SLFGFDLEQN--INKKVC 1265

Query: 78   AAITCVGSSFKRHENSITRCHWQILQLVHSSQSDQYFASAVVEGVMLKIPITVP 132
                 VGS F+R E ++T  + QI+QLV S QS Q+FA  VVEG+MLKIP+T+P
Sbjct: 1266 KGRVGVGSYFRRPEEALTSSYLQIIQLVQSPQSGQFFAWVVVEGLMLKIPLTIP 1312

[Close]

BLAST of Spg036051 vs. ExPASy TrEMBL
Match: A0A6J1DHX7 (DNA polymerase epsilon catalytic subunit OS=Momordica charantia OX=3673 GN=LOC111020656 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 7.2e-47
Identity = 98/131 (74.81%), Postives = 107/131 (81.68%), Query Frame = 0


Query: 1    SVMQDDFNGGGCEPSSSLHFEDIVKNVDYQGCLEMKKLKWKDTLDKRKNQRLIDLRTPLP 60
            SV Q +FNGGGCEPSS LH E++ KNVDY G LEMKK KWKDTLDKRK QRL++LRT LP
Sbjct: 1220 SVRQVNFNGGGCEPSSPLHVENVDKNVDYHGWLEMKKRKWKDTLDKRKKQRLVNLRTSLP 1279

Query: 61   LNGVSQELNCGMNDKEAAAITCVGSSFKRHENSITRCHWQILQLVHSSQSDQYFASAVVE 120
             N V+ ELN  MN+KE    + VGS FKRHE SITRCHWQILQLVHSSQS Q+FA AVVE
Sbjct: 1280 ANDVTWELNAAMNNKETPRTSGVGSYFKRHEVSITRCHWQILQLVHSSQSGQFFAWAVVE 1339

Query: 121  GVMLKIPITVP 132
            GVMLKIPITVP
Sbjct: 1340 GVMLKIPITVP 1350

[Close]

BLAST of Spg036051 vs. ExPASy TrEMBL
Match: A0A6J1DJK0 (DNA polymerase epsilon catalytic subunit OS=Momordica charantia OX=3673 GN=LOC111020656 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 7.2e-47
Identity = 98/131 (74.81%), Postives = 107/131 (81.68%), Query Frame = 0


Query: 1    SVMQDDFNGGGCEPSSSLHFEDIVKNVDYQGCLEMKKLKWKDTLDKRKNQRLIDLRTPLP 60
            SV Q +FNGGGCEPSS LH E++ KNVDY G LEMKK KWKDTLDKRK QRL++LRT LP
Sbjct: 1220 SVRQVNFNGGGCEPSSPLHVENVDKNVDYHGWLEMKKRKWKDTLDKRKKQRLVNLRTSLP 1279

Query: 61   LNGVSQELNCGMNDKEAAAITCVGSSFKRHENSITRCHWQILQLVHSSQSDQYFASAVVE 120
             N V+ ELN  MN+KE    + VGS FKRHE SITRCHWQILQLVHSSQS Q+FA AVVE
Sbjct: 1280 ANDVTWELNAAMNNKETPRTSGVGSYFKRHEVSITRCHWQILQLVHSSQSGQFFAWAVVE 1339

Query: 121  GVMLKIPITVP 132
            GVMLKIPITVP
Sbjct: 1340 GVMLKIPITVP 1350

[Close]

BLAST of Spg036051 vs. ExPASy TrEMBL
Match: A0A1S4E210 (DNA polymerase epsilon catalytic subunit OS=Cucumis melo OX=3656 GN=LOC103497954 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.6e-41
Identity = 91/131 (69.47%), Postives = 102/131 (77.86%), Query Frame = 0


Query: 1    SVMQDDFNGGGCEPSSSLHFEDIVKNVDYQGCLEMKKLKWKDTLDKRKNQRLIDLRTPLP 60
            S MQD+FN GG EPSS L  E+I KNVDY G LE+KK KWKDTLD+RK QRL+  RTPL 
Sbjct: 1223 SEMQDNFNDGGFEPSSPLDVENIDKNVDYSGWLEIKKRKWKDTLDRRKKQRLVSSRTPLA 1282

Query: 61   LNGVSQELNCGMNDKEAAAITCVGSSFKRHENSITRCHWQILQLVHSSQSDQYFASAVVE 120
             N +++ELN   N+K+    T VGS FKRHE S+TRCHWQILQLVHSSQS QYFA AVVE
Sbjct: 1283 TNNITRELNGATNNKDGPR-TGVGSYFKRHEGSVTRCHWQILQLVHSSQSGQYFAWAVVE 1342

Query: 121  GVMLKIPITVP 132
            GVMLKIPI VP
Sbjct: 1343 GVMLKIPINVP 1352

[Close]

BLAST of Spg036051 vs. ExPASy TrEMBL
Match: A0A1S3C879 (DNA polymerase epsilon catalytic subunit OS=Cucumis melo OX=3656 GN=LOC103497954 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.6e-41
Identity = 91/131 (69.47%), Postives = 102/131 (77.86%), Query Frame = 0


Query: 1    SVMQDDFNGGGCEPSSSLHFEDIVKNVDYQGCLEMKKLKWKDTLDKRKNQRLIDLRTPLP 60
            S MQD+FN GG EPSS L  E+I KNVDY G LE+KK KWKDTLD+RK QRL+  RTPL 
Sbjct: 1223 SEMQDNFNDGGFEPSSPLDVENIDKNVDYSGWLEIKKRKWKDTLDRRKKQRLVSSRTPLA 1282

Query: 61   LNGVSQELNCGMNDKEAAAITCVGSSFKRHENSITRCHWQILQLVHSSQSDQYFASAVVE 120
             N +++ELN   N+K+    T VGS FKRHE S+TRCHWQILQLVHSSQS QYFA AVVE
Sbjct: 1283 TNNITRELNGATNNKDGPR-TGVGSYFKRHEGSVTRCHWQILQLVHSSQSGQYFAWAVVE 1342

Query: 121  GVMLKIPITVP 132
            GVMLKIPI VP
Sbjct: 1343 GVMLKIPINVP 1352

[Close]

BLAST of Spg036051 vs. ExPASy TrEMBL
Match: A0A0A0KDM5 (DNA polymerase epsilon catalytic subunit OS=Cucumis sativus OX=3659 GN=Csa_6G151760 PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 5.9e-41
Identity = 90/131 (68.70%), Postives = 103/131 (78.63%), Query Frame = 0


Query: 1   SVMQDDFNGGGCEPSSSLHFEDIVKNVDYQGCLEMKKLKWKDTLDKRKNQRLIDLRTPLP 60
           S MQ++FN GG EPSS +  E+I KNVDY G LE+KK KWKDTLD+RK QRL++ RTPL 
Sbjct: 279 SEMQENFNDGGFEPSSPVDVENIDKNVDYSGWLELKKRKWKDTLDRRKKQRLVNSRTPLA 338

Query: 61  LNGVSQELNCGMNDKEAAAITCVGSSFKRHENSITRCHWQILQLVHSSQSDQYFASAVVE 120
            N V++ELN   N+K+A   T VGS FKRHE S+TRCHWQILQLVHS QS QYFA AVVE
Sbjct: 339 ANNVTRELNGATNNKDAPR-TGVGSYFKRHEGSVTRCHWQILQLVHSPQSGQYFAWAVVE 398

Query: 121 GVMLKIPITVP 132
           GVMLKIPI VP
Sbjct: 399 GVMLKIPINVP 408

[Close]

BLAST of Spg036051 vs. TAIR 10
Match: AT1G08260.1 (DNA polymerase epsilon catalytic subunit )

HSP 1 Score: 103.6 bits (257), Expect = 1.2e-22
Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 0


Query: 18   LHFEDIVKNVDYQGCLEMKKLKWKDTLDKRKNQRLIDLRTPLPLNGVSQELNCGMNDKEA 77
            + F++I K+V+YQG LE+KK KWK TL+K+K +RL DLR+       +Q     +N K  
Sbjct: 1222 ISFQNIDKSVNYQGWLELKKRKWKVTLEKKKKRRLGDLRSS------NQVDTHEINQKVG 1281

Query: 78   AAITCVGSSFKRHENSITRCHWQILQLVHSSQSDQYFASAVVEGVMLKIPITVP 132
                 VGS F+R E ++T  HWQI+QLV S QS Q+FA  VVEG+MLKIP+++P
Sbjct: 1282 QGRGGVGSYFRRPEEALTSSHWQIIQLVPSPQSGQFFAWVVVEGLMLKIPLSIP 1329

[Close]

BLAST of Spg036051 vs. TAIR 10
Match: AT2G27120.1 (DNA polymerase epsilon catalytic subunit )

HSP 1 Score: 90.5 bits (223), Expect = 1.1e-18
Identity = 52/114 (45.61%), Postives = 70/114 (61.40%), Query Frame = 0


Query: 18   LHFEDIVKNVDYQGCLEMKKLKWKDTLDKRKNQRLIDLRTPLPLNGVSQELNCGMNDKEA 77
            +  +++ KNVDYQG LE++K KWK TL  +K +R         L G   E N  +N K  
Sbjct: 1206 ISLQNVDKNVDYQGWLELEKRKWKMTLTNKKKRRYSS-----SLFGFDLEQN--INKKVC 1265

Query: 78   AAITCVGSSFKRHENSITRCHWQILQLVHSSQSDQYFASAVVEGVMLKIPITVP 132
                 VGS F+R E ++T  + QI+QLV S QS Q+FA  VVEG+MLKIP+T+P
Sbjct: 1266 KGRVGVGSYFRRPEEALTSSYLQIIQLVQSPQSGQFFAWVVVEGLMLKIPLTIP 1312

The following BLAST results are available for this feature:

BLAST of Spg036051 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153062.1	1.5e-46	74.81	DNA polymerase epsilon catalytic subunit A-like isoform X2 [Momordica charantia]	[more]
XP_022153061.1	1.5e-46	74.81	DNA polymerase epsilon catalytic subunit A-like isoform X1 [Momordica charantia]	[more]
XP_038901114.1	2.4e-44	73.28	DNA polymerase epsilon catalytic subunit A-like isoform X1 [Benincasa hispida]	[more]
XP_038901115.1	2.4e-44	73.28	DNA polymerase epsilon catalytic subunit A-like isoform X2 [Benincasa hispida]	[more]
XP_038901116.1	2.4e-44	73.28	DNA polymerase epsilon catalytic subunit A-like isoform X3 [Benincasa hispida]	[more]

BLAST of Spg036051 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4HW04	1.7e-21	49.12	DNA polymerase epsilon catalytic subunit A OS=Arabidopsis thaliana OX=3702 GN=PO...	[more]
F4IFN6	1.5e-17	45.61	DNA polymerase epsilon catalytic subunit B OS=Arabidopsis thaliana OX=3702 GN=PO...	[more]

BLAST of Spg036051 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DHX7	7.2e-47	74.81	DNA polymerase epsilon catalytic subunit OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1DJK0	7.2e-47	74.81	DNA polymerase epsilon catalytic subunit OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A1S4E210	1.6e-41	69.47	DNA polymerase epsilon catalytic subunit OS=Cucumis melo OX=3656 GN=LOC103497954...	[more]
A0A1S3C879	1.6e-41	69.47	DNA polymerase epsilon catalytic subunit OS=Cucumis melo OX=3656 GN=LOC103497954...	[more]
A0A0A0KDM5	5.9e-41	68.70	DNA polymerase epsilon catalytic subunit OS=Cucumis sativus OX=3659 GN=Csa_6G151...	[more]

BLAST of Spg036051 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08260.1	1.2e-22	49.12	DNA polymerase epsilon catalytic subunit	[more]
AT2G27120.1	1.1e-18	45.61	DNA polymerase epsilon catalytic subunit	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg036051.1	Spg036051.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0006281	DNA repair
biological_process	GO:0006260	DNA replication
cellular_component	GO:0008622	epsilon DNA polymerase complex
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0008270	zinc ion binding