Spg035920 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg035920
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionsignal recognition particle 14 kDa protein
Locationscaffold5: 39587704 .. 39590792 (-)
RNA-Seq ExpressionSpg035920
SyntenySpg035920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCTGCATATGAATGAAATTCAAGTTGCGTGTACTGCATTATTGCATCTTTTCTCCAGTTCCACCACTCGGCTCGATCTTCTTTTCAATGGTTGCTTTTTTATTTAAGCGGAGGAAATTGGGCCTCACATTTTTTAATCTCTATTGGTTGGAAGTCTTGGTGGAAATTCATTCTGTTGCAGGAGTTTTAGTTCTTTCATTCAAATTTGGCAAAAAGAATTGCTGAATTTGCCAAGTACAGATTCTTCGATGGCACTTAGGTCTGTAAAAATCGACCAATTAATGGACTTACTCCCTTCTGGTAGAAAATAATGATTAAAGAAAAATCTAACGACAGATGGTATTGGCCAAACTATAAGAGAAGGAATTGAAATGCTATATCACCTCATTTGCCCCCAGGAACATTGGATTGGCCCTTGAGTTTATTTGGCCAATTTGGATTCAAATGGGGTGTGGTTCTTTGGTAAGTCTTGAGTAGCCAAACTATAAAAATATGAAAGTTATTTGGTATTTGAATTTCTAACCATAACCCATAGTTTGTTATAAGTTCCAATTAAACTAGATGTACCATCGTTTCTCTCGAAATTGCTTAGTGCACCTGTGCTTGTTTGCAGCTTCTGCATATTTTGCATTAGTCTTACAAAGTTTTTTCTTCCAACACTTCCTCATGCAACCTAGCAATTTTCTCTGCCAATGGTCCAAGAGAAAGCATTTAGGATCCCTCTCACTCGGGACTTCATATATGGACTTAATTTTCATGTTATTAAATTTGAATTTGTATGGAGCCAAGGATAAGTCCTGATGTTGTGGTATGTCTGTCTTAAGCATCTTAATAGGTTCCCCAATGTTTTCTTTCTAACTTTGTTTGATAGAAAAGTCAGCGTCCATTGGGTTGAAAAAACTGATCAACCCTTAAGTATTGATGTTAACTGAACAGTACAGATTCTTTCTTCAAAAGAGAAGTCCACTATTATATGCTCTCACCAAGATATAGCTTTTGATGATACGTACTCCAACATTTCCTAGGCTCACTAAGCAAACCAAATTCTGGAAGTTCCTGTTTCAGGGTTTCAAAACCTTGCTGCTGTATTCGACTTACTGAAATTTGCCTCTAGAGCTAACCTATTGGCACATACGAAAGGAAAGAAACAACGGAATCTTCAATGACAAGTGTAGACCATGTAAATTTTATGATCTTATACAGTTTACGACTAGAGTGCCTAGAGTCTTTTACAGTGTTTTTCTTTGAGTGGTAGAGGCACAATGATTTTTATAATTACTTCACTTTTTTGGTCAACGAGGGTATTTTTTTTAATAAAAAAACCTCCCCTTTCAAGCAAAGAGAGTGCAAAAACTCACTATGCAAGCACATATAGTTGTAGGTAGTAATTTATGAATCAAGGTTGATCCTACAAGGACTAATTTATGCGAATTTGATAAAATTGAGTCCCAATCAAAATGTTAGAGGTTTAAATCCCCCTTCCACATATTGAACTAAAAAAAGTTGCAACTCAACTCCGAAAACAATCTTCAACAGAAAATACAAAAATGAAGAACAAATGATGCATTTGACTCCATTTAATTCAAAATTAAGTAAAGAAAGATGTTAAATTAAGCACATTTCATAGCATTATCAGAATCCGTTTCTTGCCTCCTTGGCCTTTAGATTTTCTATGGTTGGTTTTCTTTAATGGAAGTATCTGTTCCTTTGTCGACTGCTGGAAATGATATCAGATTACGAGCAGGAGTTTACTCATGAGTTTCCTACAAAGAGAGGATGAACTGTTGTTATTGAGTAGAGTTGCCAAAAATTCACTGCAGATGGGAATGTTGTTGCCAACACCTTGCAGATTCTACTTAAGAACAATAGAAAGAACACAATTGCAATTGCTATATCAAGTTTAGTCGTTGTCTCACTGGTATTTGGACAGTACTTAAATTGACTTGATTTATGCAATTTATCAGTCCGAATAATGAGATGTGCATATTACCATTTTATTTGTCTCACTGATATTTGGACCATACTAAGTTACTTGATTTATGGAATTTATCGATCCAAATTCTGAGATGTGCACAATTAGCATTAAACGTTTCATTCAAGATTAGAATTCTTTGGCTTGATTATGATGTTGATAAGTTCCTTTTCTTTTGATTTAGGTTCTACTGCAGCTAGATCCTTTTCTCAATGAACTTACCAGCATGTTTGAGCGTAGTACTGAGAAGGGTTCAGTGTGGGTTACTCTAAAACGATGTATGTATATCAGCTTGTTGATTAGTTTCGTGAATCTTTATGATAAACTTTAGAACTCTGATTAGAAACTATATTGTATCTCATATTGTTGTAGCATCACTGAAGTCCAAGGTGCAGAGAAATAAAATGACCACTGCTGGTCAACCTATCGAGTACAGGTGCCTCATCCGTGCAACTGATGGGAAGAAGACAATTTCAACTTCAGTAAGTATTGACTCATCTTTTAGCCTCTCTCTCTCTCTCTTTGTTTTTACTCATCGTTTTTATTTCGGAAGTTTCTAACTTTCTTGAATCCGAAGCATTTGTAACACTTTCTCCTGAACTGGCTAGGTTGGAGCAAAAGATCACCTGAAATTTCAAGCTTCCTATTCAACCATTCTTAAAGCTCACATGACTGCTCTTAAAAAGAGAGAGAGGAAGGACAAGAAGAAGGCACCAGAGGCAGAGAAGGATCTGAAGAAAAAACCCAGGAAAGGATGAAGGAAAATGCAGAGGAAAGAAGAGGAGAGGTAGGATTTTGGAATTTCAGGATTTTGAAAGATAATTTTGTCATTTGTTTAGCCATTTTTTTCCCTCAAAAAAGGATTAACATGTACATGTAATTTTACTATGGGATTATCTGGAAGTTTTACATACTCTCCCCCTAAGTTATTAAAAAAAAAAAAACCTTGCTTAAACGTTCGATCACAAGCTTTTTATTGTTTGTGATTCATCTGGGAACTTGTGGATGAAAATTTCAGTCTTTTTAATTTTTTTTGGTGGGAGAATTCAAACCACAGATCTCGTGGTCATTAGTACAACGTTATGCTGGTTGAGCTATGCTCTTGTTAGCTTTCAG

mRNA sequence

GTTCTGCATATGAATGAAATTCAAGTTGCGTGTACTGCATTATTGCATCTTTTCTCCAGTTCCACCACTCGGCTCGATCTTCTTTTCAATGATGGGAATGTTGTTGCCAACACCTTGCAGATTCTACTTAAGAACAATAGAAAGAACACAATTGCAATTGCTATATCAAGTTTAGTCGTTGTCTCACTGGTTCTACTGCAGCTAGATCCTTTTCTCAATGAACTTACCAGCATGTTTGAGCGTAGTACTGAGAAGGGTTCAGTGTGGGTTACTCTAAAACGATCATCACTGAAGTCCAAGGTGCAGAGAAATAAAATGACCACTGCTGGTCAACCTATCGAGTACAGGTGCCTCATCCGTGCAACTGATGGGAAGAAGACAATTTCAACTTCAGTTGGAGCAAAAGATCACCTGAAATTTCAAGCTTCCTATTCAACCATTCTTAAAGCTCACATGACTGCTCTTAAAAAGAGAGAGAGGAAGGACAAGAAGAAGGCACCAGAGGCAGAGAAGGATCTGAAGAAAAAACCCAGGAAAGGATGA

Coding sequence (CDS)

GTTCTGCATATGAATGAAATTCAAGTTGCGTGTACTGCATTATTGCATCTTTTCTCCAGTTCCACCACTCGGCTCGATCTTCTTTTCAATGATGGGAATGTTGTTGCCAACACCTTGCAGATTCTACTTAAGAACAATAGAAAGAACACAATTGCAATTGCTATATCAAGTTTAGTCGTTGTCTCACTGGTTCTACTGCAGCTAGATCCTTTTCTCAATGAACTTACCAGCATGTTTGAGCGTAGTACTGAGAAGGGTTCAGTGTGGGTTACTCTAAAACGATCATCACTGAAGTCCAAGGTGCAGAGAAATAAAATGACCACTGCTGGTCAACCTATCGAGTACAGGTGCCTCATCCGTGCAACTGATGGGAAGAAGACAATTTCAACTTCAGTTGGAGCAAAAGATCACCTGAAATTTCAAGCTTCCTATTCAACCATTCTTAAAGCTCACATGACTGCTCTTAAAAAGAGAGAGAGGAAGGACAAGAAGAAGGCACCAGAGGCAGAGAAGGATCTGAAGAAAAAACCCAGGAAAGGATGA

Protein sequence

VLHMNEIQVACTALLHLFSSSTTRLDLLFNDGNVVANTLQILLKNNRKNTIAIAISSLVVVSLVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRKG
Homology
[Close]
BLAST of Spg035920 vs. NCBI nr
Match: XP_038893990.1 (signal recognition particle 14 kDa protein isoform X2 [Benincasa hispida])

HSP 1 Score: 213.0 bits (541), Expect = 2.1e-51
Identity = 114/117 (97.44%), Postives = 116/117 (99.15%), Query Frame = 0 

Query: 63  LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 122
           +VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 123 DGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 180
           DGKKTISTSVGAKDHL+FQASYSTILKAHMTALKKRERKDKKKAPEAEK LKKKPRK
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPEAEKGLKKKPRK 117

[Close]
BLAST of Spg035920 vs. NCBI nr
Match: XP_038893989.1 (signal recognition particle 14 kDa protein isoform X1 [Benincasa hispida])

HSP 1 Score: 212.6 bits (540), Expect = 2.8e-51
Identity = 114/116 (98.28%), Postives = 115/116 (99.14%), Query Frame = 0 

Query: 64  VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATD 123
           VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATD
Sbjct: 9   VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATD 68

Query: 124 GKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 180
           GKKTISTSVGAKDHL+FQASYSTILKAHMTALKKRERKDKKKAPEAEK LKKKPRK
Sbjct: 69  GKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPEAEKGLKKKPRK 124

[Close]
BLAST of Spg035920 vs. NCBI nr
Match: XP_022954536.1 (signal recognition particle 14 kDa protein-like isoform X1 [Cucurbita moschata] >XP_022954537.1 signal recognition particle 14 kDa protein-like isoform X1 [Cucurbita moschata] >XP_022994924.1 signal recognition particle 14 kDa protein-like isoform X1 [Cucurbita maxima] >XP_022994925.1 signal recognition particle 14 kDa protein-like isoform X1 [Cucurbita maxima] >XP_023541199.1 signal recognition particle 14 kDa protein-like [Cucurbita pepo subsp. pepo] >XP_023541200.1 signal recognition particle 14 kDa protein-like [Cucurbita pepo subsp. pepo] >KAG6573374.1 Signal recognition particle 14 kDa protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012543.1 Signal recognition particle 14 kDa protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 212.2 bits (539), Expect = 3.6e-51
Identity = 113/117 (96.58%), Postives = 116/117 (99.15%), Query Frame = 0 

Query: 63  LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 122
           +VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 123 DGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 180
           DGKKTISTSVGAKDHL+FQASYSTILKAHMTALKKRERKD+KKAPEAEKD KKKPRK
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDRKKAPEAEKDSKKKPRK 117

[Close]
BLAST of Spg035920 vs. NCBI nr
Match: KGN66307.2 (hypothetical protein Csa_023187 [Cucumis sativus])

HSP 1 Score: 211.1 bits (536), Expect = 8.1e-51
Identity = 113/119 (94.96%), Postives = 117/119 (98.32%), Query Frame = 0 

Query: 61  VSLVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIR 120
           +++VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIR
Sbjct: 82  IAMVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIR 141

Query: 121 ATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 180
           ATDGKKTISTSVGAKDHL+FQASYSTILKAHMTALKKRERKDKKKA EAEK LKKKPRK
Sbjct: 142 ATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRK 200

[Close]
BLAST of Spg035920 vs. NCBI nr
Match: KAG6583884.1 (Signal recognition particle 14 kDa protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 210.3 bits (534), Expect = 1.4e-50
Identity = 116/131 (88.55%), Postives = 124/131 (94.66%), Query Frame = 0 

Query: 49  NTIAIAISSLVVVSLVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTT 108
           +T A+AI+    +++VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTT
Sbjct: 49  HTTAVAIA----IAMVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTT 108

Query: 109 AGQPIEYRCLIRATDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKDKKKAPE 168
           AGQPIEYRCLIRAT+GKKTISTSVGAKDHL+FQASYSTILKAHMTALKKRERKDKKKA E
Sbjct: 109 AGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAE 168

Query: 169 AEKDLKKKPRK 180
           AEK LKKKPRK
Sbjct: 169 AEKGLKKKPRK 175

[Close]
BLAST of Spg035920 vs. ExPASy Swiss-Prot
Match: O04421 (Signal recognition particle 14 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SRP14 PE=2 SV=2)

HSP 1 Score: 177.6 bits (449), Expect = 1.3e-43
Identity = 91/109 (83.49%), Postives = 103/109 (94.50%), Query Frame = 0 

Query: 63  LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 122
           +VLLQLDPFLNELTSMFE+S EKGSVWVTLKRSSLKSKVQ+ K+++ G+ IEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFEKSKEKGSVWVTLKRSSLKSKVQKRKLSSVGESIEYRCLIRAT 60

Query: 123 DGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKDKKKAPEAEK 172
           DGKKT+STSVGAKDH +FQASY+TILKAHMTALKKRERKD+KK+ EAEK
Sbjct: 61  DGKKTVSTSVGAKDHQRFQASYATILKAHMTALKKRERKDRKKSTEAEK 109

[Close]
BLAST of Spg035920 vs. ExPASy Swiss-Prot
Match: O04433 (Signal recognition particle 14 kDa protein OS=Oryza sativa subsp. japonica OX=39947 GN=SRP14 PE=2 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.0e-36
Identity = 80/117 (68.38%), Postives = 99/117 (84.62%), Query Frame = 0 

Query: 63  LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 122
           +V+LQ DPFL+ELTSM+ERSTEKGSVWVT+KRSS+K + +  KM   G+ +EYRCL+RAT
Sbjct: 1   MVVLQPDPFLSELTSMYERSTEKGSVWVTMKRSSMKCQARLKKMAAKGEAVEYRCLVRAT 60

Query: 123 DGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 180
           DGKK I T++ AK++LKFQASY+T+LKAHM ALKKRERKDKKKA E EK  +K P+K
Sbjct: 61  DGKKNICTALSAKEYLKFQASYATVLKAHMHALKKRERKDKKKAAEVEKIPEKAPKK 117

[Close]
BLAST of Spg035920 vs. ExPASy Swiss-Prot
Match: P37108 (Signal recognition particle 14 kDa protein OS=Homo sapiens OX=9606 GN=SRP14 PE=1 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 6.1e-17
Identity = 50/108 (46.30%), Postives = 75/108 (69.44%), Query Frame = 0 

Query: 63  LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAG-QPIEYRCLIRA 122
           +VLL+ + FL ELT +F++    GSV++TLK+   ++K    K T  G +P + +CL+RA
Sbjct: 1   MVLLESEQFLTELTRLFQKCRTSGSVYITLKKYDGRTKPIPKKGTVEGFEPADNKCLLRA 60

Query: 123 TDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKDKKKAPEA 170
           TDGKK IST V +K+  KFQ +YS +L+A+M  LKKR++K+K K  +A
Sbjct: 61  TDGKKKISTVVSSKEVNKFQMAYSNLLRANMDGLKKRDKKNKTKKTKA 108

[Close]
BLAST of Spg035920 vs. ExPASy Swiss-Prot
Match: Q4R5C7 (Signal recognition particle 14 kDa protein OS=Macaca fascicularis OX=9541 GN=SRP14 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 6.1e-17
Identity = 50/108 (46.30%), Postives = 75/108 (69.44%), Query Frame = 0 

Query: 63  LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAG-QPIEYRCLIRA 122
           +VLL+ + FL ELT +F++    GSV++TLK+   ++K    K T  G +P + +CL+RA
Sbjct: 1   MVLLESEQFLTELTRLFQKCRTSGSVYITLKKYDGRTKPIPKKGTVEGFEPADNKCLLRA 60

Query: 123 TDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKDKKKAPEA 170
           TDGKK IST V +K+  KFQ +YS +L+A+M  LKKR++K+K K  +A
Sbjct: 61  TDGKKKISTVVSSKEVNKFQMAYSNLLRANMDGLKKRDKKNKTKKTKA 108

[Close]
BLAST of Spg035920 vs. ExPASy Swiss-Prot
Match: Q5RBX7 (Signal recognition particle 14 kDa protein OS=Pongo abelii OX=9601 GN=SRP14 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 6.1e-17
Identity = 50/108 (46.30%), Postives = 75/108 (69.44%), Query Frame = 0 

Query: 63  LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAG-QPIEYRCLIRA 122
           +VLL+ + FL ELT +F++    GSV++TLK+   ++K    K T  G +P + +CL+RA
Sbjct: 1   MVLLESEQFLTELTRLFQKCRTSGSVYITLKKYDGRTKPIPKKGTVEGFEPADNKCLLRA 60

Query: 123 TDGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKDKKKAPEA 170
           TDGKK IST V +K+  KFQ +YS +L+A+M  LKKR++K+K K  +A
Sbjct: 61  TDGKKKISTVVSSKEVNKFQMAYSNLLRANMDGLKKRDKKNKTKKTKA 108

[Close]
BLAST of Spg035920 vs. ExPASy TrEMBL
Match: A0A6J1K2P1 (signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490504 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.8e-51
Identity = 113/117 (96.58%), Postives = 116/117 (99.15%), Query Frame = 0 

Query: 63  LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 122
           +VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 123 DGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 180
           DGKKTISTSVGAKDHL+FQASYSTILKAHMTALKKRERKD+KKAPEAEKD KKKPRK
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDRKKAPEAEKDSKKKPRK 117

[Close]
BLAST of Spg035920 vs. ExPASy TrEMBL
Match: A0A6J1GR82 (signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456777 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.8e-51
Identity = 113/117 (96.58%), Postives = 116/117 (99.15%), Query Frame = 0 

Query: 63  LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 122
           +VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 123 DGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 180
           DGKKTISTSVGAKDHL+FQASYSTILKAHMTALKKRERKD+KKAPEAEKD KKKPRK
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDRKKAPEAEKDSKKKPRK 117

[Close]
BLAST of Spg035920 vs. ExPASy TrEMBL
Match: A0A6J1KGP7 (signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495612 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 8.7e-51
Identity = 113/117 (96.58%), Postives = 115/117 (98.29%), Query Frame = 0 

Query: 63  LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 122
           +VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 123 DGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 180
           DGKKTISTSVGAKDHL+FQASYSTILKAHMTALKKRERKDKKKA EAEK LKKKPRK
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRK 117

[Close]
BLAST of Spg035920 vs. ExPASy TrEMBL
Match: A0A0A0LYE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534730 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 8.7e-51
Identity = 113/117 (96.58%), Postives = 115/117 (98.29%), Query Frame = 0 

Query: 63  LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 122
           +VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 123 DGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 180
           DGKKTISTSVGAKDHL+FQASYSTILKAHMTALKKRERKDKKKA EAEK LKKKPRK
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRK 117

[Close]
BLAST of Spg035920 vs. ExPASy TrEMBL
Match: A0A1S3BBI8 (signal recognition particle 14 kDa protein OS=Cucumis melo OX=3656 GN=LOC103487869 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 8.7e-51
Identity = 113/117 (96.58%), Postives = 115/117 (98.29%), Query Frame = 0 

Query: 63  LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 122
           +VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 123 DGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 180
           DGKKTISTSVGAKDHL+FQASYSTILKAHMTALKKRERKDKKKA EAEK LKKKPRK
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRK 117

[Close]
BLAST of Spg035920 vs. TAIR 10
Match: AT2G43640.1 (Signal recognition particle, SRP9/SRP14 subunit )

HSP 1 Score: 177.6 bits (449), Expect = 9.2e-45
Identity = 91/109 (83.49%), Postives = 103/109 (94.50%), Query Frame = 0 

Query: 63  LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 122
           +VLLQLDPFLNELTSMFE+S EKGSVWVTLKRSSLKSKVQ+ K+++ G+ IEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFEKSKEKGSVWVTLKRSSLKSKVQKRKLSSVGESIEYRCLIRAT 60

Query: 123 DGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKDKKKAPEAEK 172
           DGKKT+STSVGAKDH +FQASY+TILKAHMTALKKRERKD+KK+ EAEK
Sbjct: 61  DGKKTVSTSVGAKDHQRFQASYATILKAHMTALKKRERKDRKKSTEAEK 109

[Close]
BLAST of Spg035920 vs. TAIR 10
Match: AT2G43640.2 (Signal recognition particle, SRP9/SRP14 subunit )

HSP 1 Score: 177.6 bits (449), Expect = 9.2e-45
Identity = 91/109 (83.49%), Postives = 103/109 (94.50%), Query Frame = 0 

Query: 63  LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 122
           +VLLQLDPFLNELTSMFE+S EKGSVWVTLKRSSLKSKVQ+ K+++ G+ IEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFEKSKEKGSVWVTLKRSSLKSKVQKRKLSSVGESIEYRCLIRAT 60

Query: 123 DGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKDKKKAPEAEK 172
           DGKKT+STSVGAKDH +FQASY+TILKAHMTALKKRERKD+KK+ EAEK
Sbjct: 61  DGKKTVSTSVGAKDHQRFQASYATILKAHMTALKKRERKDRKKSTEAEK 109

[Close]
BLAST of Spg035920 vs. TAIR 10
Match: AT2G43640.3 (Signal recognition particle, SRP9/SRP14 subunit )

HSP 1 Score: 150.6 bits (379), Expect = 1.2e-36
Identity = 81/109 (74.31%), Postives = 94/109 (86.24%), Query Frame = 0 

Query: 63  LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 122
           +VLLQLDPFLNELTSMFE+S EK         +SLKSKVQ+ K+++ G+ IEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFEKSKEK---------ASLKSKVQKRKLSSVGESIEYRCLIRAT 60

Query: 123 DGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERKDKKKAPEAEK 172
           DGKKT+STSVGAKDH +FQASY+TILKAHMTALKKRERKD+KK+ EAEK
Sbjct: 61  DGKKTVSTSVGAKDHQRFQASYATILKAHMTALKKRERKDRKKSTEAEK 100

The following BLAST results are available for this feature:
BLAST of Spg035920 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038893990.12.1e-5197.44signal recognition particle 14 kDa protein isoform X2 [Benincasa hispida][more]
XP_038893989.12.8e-5198.28signal recognition particle 14 kDa protein isoform X1 [Benincasa hispida][more]
XP_022954536.13.6e-5196.58signal recognition particle 14 kDa protein-like isoform X1 [Cucurbita moschata] ... [more]
KGN66307.28.1e-5194.96hypothetical protein Csa_023187 [Cucumis sativus][more]
KAG6583884.11.4e-5088.55Signal recognition particle 14 kDa protein, partial [Cucurbita argyrosperma subs... [more]
BLAST of Spg035920 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O044211.3e-4383.49Signal recognition particle 14 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SR... [more]
O044332.0e-3668.38Signal recognition particle 14 kDa protein OS=Oryza sativa subsp. japonica OX=39... [more]
P371086.1e-1746.30Signal recognition particle 14 kDa protein OS=Homo sapiens OX=9606 GN=SRP14 PE=1... [more]
Q4R5C76.1e-1746.30Signal recognition particle 14 kDa protein OS=Macaca fascicularis OX=9541 GN=SRP... [more]
Q5RBX76.1e-1746.30Signal recognition particle 14 kDa protein OS=Pongo abelii OX=9601 GN=SRP14 PE=2... [more]
BLAST of Spg035920 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1K2P11.8e-5196.58signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita maxima O... [more]
A0A6J1GR821.8e-5196.58signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita moschata... [more]
A0A6J1KGP78.7e-5196.58signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita maxima O... [more]
A0A0A0LYE08.7e-5196.58Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534730 PE=3 SV=1[more]
A0A1S3BBI88.7e-5196.58signal recognition particle 14 kDa protein OS=Cucumis melo OX=3656 GN=LOC1034878... [more]
BLAST of Spg035920 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G43640.19.2e-4583.49Signal recognition particle, SRP9/SRP14 subunit [more]
AT2G43640.29.2e-4583.49Signal recognition particle, SRP9/SRP14 subunit [more]
AT2G43640.31.2e-3674.31Signal recognition particle, SRP9/SRP14 subunit [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003210Signal recognition particle, SRP14 subunitPFAMPF02290SRP14coord: 66..155
e-value: 2.3E-22
score: 79.4
IPR003210Signal recognition particle, SRP14 subunitPANTHERPTHR12013SIGNAL RECOGNITION PARTICLE 14 KD PROTEINcoord: 44..171
IPR009018Signal recognition particle, SRP9/SRP14 subunitGENE3D3.30.720.10Signal recognition particle alu RNA binding heterodimer, srp9/1coord: 63..179
e-value: 5.1E-38
score: 132.6
IPR009018Signal recognition particle, SRP9/SRP14 subunitSUPERFAMILY54762Signal recognition particle alu RNA binding heterodimer, SRP9/14coord: 64..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..180
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..180
NoneNo IPR availablePANTHERPTHR12013:SF3SUBFAMILY NOT NAMEDcoord: 44..171

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg035920.1Spg035920.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G protein-coupled receptor signaling pathway
biological_process GO:0006614 SRP-dependent cotranslational protein targeting to membrane
cellular_component GO:0005786 signal recognition particle, endoplasmic reticulum targeting
cellular_component GO:0048500 signal recognition particle
molecular_function GO:0008312 7S RNA binding
molecular_function GO:0030942 endoplasmic reticulum signal peptide binding