Spg035854 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACCGCACCGCCACACAAAAATCCATTCATTTCAATTCACTTTAAATTGAATTAAATAAAATAAAATTAATAATAAGAAGTCACGAGCTGCCGTGCCGACTGTGGCGCGTGATGAAGCTGAAAAAGTGGGGCCCATCCCCGTGTTCCTCGTGATTTTATTATTAAATAAATCTCTTTATCTCTTTTCCACTCTGCCAGTTGCCTTCCGCCATTTGCCAACCCAACCAAACAAAACAAATCCTATATATATATTCCTTTCCTTTCTTCTTCTTCTTCACCTTCCTTAACCTTCCCTTTGACTCCATCACAAATTTTCCCACTTCAATGGAAACCATCCTCAACTGCAACTTGGACCTCTGTCTCTCTCCCCCTTCTTCCTCCGCCACCGCCGACTCACCACACAACCGCGTCAGCCCTACTGGACTCCCGGTTGTCGATCCGACCGAGCTCCAGGTACTATTTCTATAACAAGTGATTATCGATATTAATTAATTAATTAGGTAGAGTTGGCATTGGTGTTGAGACGATGGACTTAGATGTATTTAGTTAAATTATTATTCATGTTTTTGTAGGTGAGGGCGATAATTGTTCAAGCGACGAAGCAAATGGAGGAGACAAGATCGACGCCTCGGATCAGATCGGAAGCGTCTTCGACGTCGATCGACCAGCTATCGATGAAGAGCGGAGCCAGCCCCGCCATGAGGAGATCGTTGCAAAGCTTTTTACAGAAGAGAAAGCATCGAATTCAAACACTTTCACCTTATACTCATTAGCTTAATTAATATTATTCTCAGTTTCACCTTATAAATTTTGACCTTCTTTTCAGTTTTTTTAGTTAGGAGTTGAGTTTCGATTGTATTGTATTGTATTGTATATATTGGCCTTGTTTATTTGCTTATATAGATTATTATATACTCAGATTTCTCCTTTAATTTATGAAGTTTAATTTT ATGGAAACCATCCTCAACTGCAACTTGGACCTCTGTCTCTCTCCCCCTTCTTCCTCCGCCACCGCCGACTCACCACACAACCGCGTCAGCCCTACTGGACTCCCGGTTGTCGATCCGACCGAGCTCCAGGTGAGGGCGATAATTGTTCAAGCGACGAAGCAAATGGAGGAGACAAGATCGACGCCTCGGATCAGATCGGAAGCGTCTTCGACGTCGATCGACCAGCTATCGATGAAGAGCGGAGCCAGCCCCGCCATGAGGAGATCGTTGCAAAGCTTTTTACAGAAGAGAAAGCATCGAATTCAAACACTTTCACCTTATACTCATTAG ATGGAAACCATCCTCAACTGCAACTTGGACCTCTGTCTCTCTCCCCCTTCTTCCTCCGCCACCGCCGACTCACCACACAACCGCGTCAGCCCTACTGGACTCCCGGTTGTCGATCCGACCGAGCTCCAGGTGAGGGCGATAATTGTTCAAGCGACGAAGCAAATGGAGGAGACAAGATCGACGCCTCGGATCAGATCGGAAGCGTCTTCGACGTCGATCGACCAGCTATCGATGAAGAGCGGAGCCAGCCCCGCCATGAGGAGATCGTTGCAAAGCTTTTTACAGAAGAGAAAGCATCGAATTCAAACACTTTCACCTTATACTCATTAG METILNCNLDLCLSPPSSSATADSPHNRVSPTGLPVVDPTELQVRAIIVQATKQMEETRSTPRIRSEASSTSIDQLSMKSGASPAMRRSLQSFLQKRKHRIQTLSPYTH Homology
BLAST of Spg035854 vs. NCBI nr
Match: XP_038895134.1 (protein TIFY 5A-like [Benincasa hispida]) HSP 1 Score: 128.6 bits (322), Expect = 3.2e-26 Identity = 76/120 (63.33%), Postives = 89/120 (74.17%), Query Frame = 0
BLAST of Spg035854 vs. NCBI nr
Match: XP_022927150.1 (protein TIFY 5A-like [Cucurbita moschata]) HSP 1 Score: 124.0 bits (310), Expect = 7.9e-25 Identity = 72/116 (62.07%), Postives = 86/116 (74.14%), Query Frame = 0
BLAST of Spg035854 vs. NCBI nr
Match: KAG7019513.1 (Protein TIFY 5A [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 123.2 bits (308), Expect = 1.3e-24 Identity = 72/118 (61.02%), Postives = 86/118 (72.88%), Query Frame = 0
BLAST of Spg035854 vs. NCBI nr
Match: XP_023520316.1 (protein TIFY 5A-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 121.7 bits (304), Expect = 3.9e-24 Identity = 72/118 (61.02%), Postives = 86/118 (72.88%), Query Frame = 0
BLAST of Spg035854 vs. NCBI nr
Match: KAG6583895.1 (Protein TIFY 5A, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 121.3 bits (303), Expect = 5.1e-24 Identity = 73/118 (61.86%), Postives = 87/118 (73.73%), Query Frame = 0
BLAST of Spg035854 vs. ExPASy TrEMBL
Match: A0A6J1EN30 (protein TIFY 5A-like OS=Cucurbita moschata OX=3662 GN=LOC111434085 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 3.8e-25 Identity = 72/116 (62.07%), Postives = 86/116 (74.14%), Query Frame = 0
BLAST of Spg035854 vs. ExPASy TrEMBL
Match: A0A6J1KQP6 (protein TIFY 5A-like OS=Cucurbita maxima OX=3661 GN=LOC111495613 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 3.9e-22 Identity = 71/120 (59.17%), Postives = 84/120 (70.00%), Query Frame = 0
BLAST of Spg035854 vs. ExPASy TrEMBL
Match: A0A1S3BA64 (protein TIFY 5A-like OS=Cucumis melo OX=3656 GN=LOC103487726 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.5e-18 Identity = 65/123 (52.85%), Postives = 81/123 (65.85%), Query Frame = 0
BLAST of Spg035854 vs. ExPASy TrEMBL
Match: A0A0A0LX13 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G435790 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 8.5e-17 Identity = 64/121 (52.89%), Postives = 81/121 (66.94%), Query Frame = 0
BLAST of Spg035854 vs. ExPASy TrEMBL
Match: A0A6J1CG02 (protein TIFY 5A-like OS=Momordica charantia OX=3673 GN=LOC111010877 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 3.9e-14 Identity = 57/117 (48.72%), Postives = 73/117 (62.39%), Query Frame = 0
BLAST of Spg035854 vs. TAIR 10
Match: AT1G30135.1 (jasmonate-zim-domain protein 8 ) HSP 1 Score: 41.6 bits (96), Expect = 4.8e-04 Identity = 30/70 (42.86%), Postives = 41/70 (58.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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